K-box region
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G09960 AT4G09960 AT4G09960 AT4G09960 AT4G09960 AT4G09960 |
| fragaria_vesca | FvH4_5g32540 FvH4_5g32540 |
| malus_domestica | MD08G1216500.v1.1 MD15G1403600.v1.1 |
| prunus_persica | Prupe.1G549600_v2.0.a1 Prupe.1G549600_v2.0.a1 Prupe.1G549600_v2.0.a1 |
| pyrus_communis | pycom08g18740 pycom15g36090 |
| rosa_chinensis | RchiOBHm_Chr7g0229221 |
| rosa_laevigata | RLG00000001521 |
| rosa_roxburghii | Rroxscaffold_3G00230530 |
| rosa_rugosa | Rorug07G0256700 Rorug07G0256800 Rorug07G0256900 Rorug07G0256900 Rorug07G0256900 Rorug07G0256900 Rorug07G0257000 Rorug07G0257100 Rorug07G0257100 Rorug07G0257400 Rorug07G0257500 Rorug07G0257600 Rorug07G0257800 |
| rosa_samantha | Rh7BG387100 Rh7CG426500 |
| rosa_wichuraiana | Rw0G001920 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 263, 458 |
| AciI | CCGC | 1 cut(s) | 261 |
| AclWI | GGATC | 4 cut(s) | 295, 419, 643, 656 |
| AcoI | YGGCCR | 1 cut(s) | 154 |
| AcsI | RAATTY | 1 cut(s) | 675 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AfaI | GTAC | 2 cut(s) | 206, 266 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 201 |
| AflII | CTTAAG | 1 cut(s) | 355 |
| AgsI | TTSAA | 3 cut(s) | 314, 446, 581 |
| AluBI | AGCT | 6 cut(s) | 103, 215, 289, 401, 478, 584 |
| AluI | AGCT | 6 cut(s) | 103, 215, 289, 401, 478, 584 |
| Alw26I | GTCTC | 3 cut(s) | 164, 286, 333 |
| AlwI | GGATC | 4 cut(s) | 295, 419, 643, 656 |
| AoxI | GGCC | 1 cut(s) | 154 |
| ApoI | RAATTY | 1 cut(s) | 675 |
| AseI | ATTAAT | 1 cut(s) | 570 |
| AspLEI | GCGC | 2 cut(s) | 133, 460 |
| AspS9I | GGNCC | 2 cut(s) | 109, 417 |
| AvaII | GGWCC | 2 cut(s) | 109, 417 |
| BauI | CACGAG | 1 cut(s) | 150 |
| BccI | CCATC | 2 cut(s) | 328, 549 |
| BceAI | ACGGC | 1 cut(s) | 141 |
| BcoDI | GTCTC | 3 cut(s) | 164, 286, 333 |
| BfaI | CTAG | 2 cut(s) | 237, 408 |
| BfrI | CTTAAG | 1 cut(s) | 355 |
| BisI | GCNGC | 1 cut(s) | 261 |
| BlpI | GCTNAGC | 1 cut(s) | 285 |
| BlsI | GCNGC | 1 cut(s) | 262 |
| Bme18I | GGWCC | 2 cut(s) | 109, 417 |
| BmgT120I | GGNCC | 2 cut(s) | 109, 417 |
| BmsI | GCATC | 1 cut(s) | 109 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 285 |
| BpuEI | CTTGAG | 1 cut(s) | 413 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseMII | CTCAG | 1 cut(s) | 281 |
| Bsh1236I | CGCG | 2 cut(s) | 263, 458 |
| BshFI | GGCC | 1 cut(s) | 156 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BsmAI | GTCTC | 3 cut(s) | 164, 286, 333 |
| BsmBI | CGTCTC | 1 cut(s) | 164 |
| BsnI | GGCC | 1 cut(s) | 156 |
| Bsp143I | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 285 |
| BspACI | CCGC | 1 cut(s) | 261 |
| BspANI | GGCC | 1 cut(s) | 156 |
| BspCNI | CTCAG | 1 cut(s) | 282 |
| BspFNI | CGCG | 2 cut(s) | 263, 458 |
| BspPI | GGATC | 4 cut(s) | 295, 419, 643, 656 |
| BspTI | CTTAAG | 1 cut(s) | 355 |
| BssMI | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| BssSI | CACGAG | 1 cut(s) | 150 |
| Bst2BI | CACGAG | 1 cut(s) | 150 |
| Bst4CI | ACNGT | 1 cut(s) | 244 |
| BstAFI | CTTAAG | 1 cut(s) | 355 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 128, 433 |
| BstDEI | CTNAG | 4 cut(s) | 285, 290, 500, 507 |
| BstFNI | CGCG | 2 cut(s) | 263, 458 |
| BstHHI | GCGC | 2 cut(s) | 133, 460 |
| BstKTI | GATC | 5 cut(s) | 191, 303, 414, 638, 664 |
| BstMAI | GTCTC | 3 cut(s) | 164, 286, 333 |
| BstMBI | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 128, 433, 581 |
| BstUI | CGCG | 2 cut(s) | 263, 458 |
| BstX2I | RGATCY | 2 cut(s) | 300, 635 |
| BstYI | RGATCY | 2 cut(s) | 300, 635 |
| BsuRI | GGCC | 1 cut(s) | 156 |
| BtgZI | GCGATG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 1 cut(s) | 240 |
| CfoI | GCGC | 2 cut(s) | 133, 460 |
| Cfr13I | GGNCC | 2 cut(s) | 109, 417 |
| Csp6I | GTAC | 2 cut(s) | 205, 265 |
| CviAII | CATG | 1 cut(s) | 428 |
| CviJI | RGCY | 9 cut(s) | 95, 103, 156, 215, 289, 401, 478, 584, 590 |
| CviKI_1 | RGCY | 9 cut(s) | 95, 103, 156, 215, 289, 401, 478, 584, 590 |
| CviQI | GTAC | 2 cut(s) | 205, 265 |
| DdeI | CTNAG | 4 cut(s) | 285, 290, 500, 507 |
| DpnI | GATC | 5 cut(s) | 190, 302, 413, 637, 663 |
| DpnII | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| EaeI | YGGCCR | 1 cut(s) | 154 |
| Eco47I | GGWCC | 2 cut(s) | 109, 417 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| Esp3I | CGTCTC | 1 cut(s) | 164 |
| FaeI | CATG | 1 cut(s) | 431 |
| FaiI | YATR | 6 cut(s) | 99, 165, 185, 429, 612, 620 |
| FatI | CATG | 1 cut(s) | 427 |
| Fnu4HI | GCNGC | 1 cut(s) | 261 |
| Fsp4HI | GCNGC | 1 cut(s) | 261 |
| FspBI | CTAG | 2 cut(s) | 237, 408 |
| GlaI | GCGC | 2 cut(s) | 132, 459 |
| GluI | GCNGC | 1 cut(s) | 261 |
| HaeIII | GGCC | 1 cut(s) | 156 |
| HhaI | GCGC | 2 cut(s) | 133, 460 |
| Hin1II | CATG | 1 cut(s) | 431 |
| Hin6I | GCGC | 2 cut(s) | 131, 458 |
| HinP1I | GCGC | 2 cut(s) | 131, 458 |
| HindIII | AAGCTT | 2 cut(s) | 213, 582 |
| HinfI | GANTC | 5 cut(s) | 278, 310, 328, 341, 385 |
| Hpy188I | TCNGA | 6 cut(s) | 87, 223, 333, 565, 661, 689 |
| Hpy188III | TCNNGA | 2 cut(s) | 633, 665 |
| HpyCH4III | ACNGT | 1 cut(s) | 244 |
| HpyCH4IV | ACGT | 1 cut(s) | 59 |
| HpyCH4V | TGCA | 3 cut(s) | 66, 122, 575 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 128, 433, 581 |
| HpyF3I | CTNAG | 4 cut(s) | 285, 290, 500, 507 |
| HpySE526I | ACGT | 1 cut(s) | 59 |
| Hsp92II | CATG | 1 cut(s) | 431 |
| HspAI | GCGC | 2 cut(s) | 131, 458 |
| Kzo9I | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| LpnPI | CCDG | 5 cut(s) | 310, 400, 612, 618, 624 |
| LweI | GCATC | 1 cut(s) | 109 |
| MaeI | CTAG | 2 cut(s) | 237, 408 |
| MaeII | ACGT | 1 cut(s) | 59 |
| MaeIII | GTNAC | 1 cut(s) | 55 |
| MalI | GATC | 5 cut(s) | 190, 302, 413, 637, 663 |
| MboI | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| MboII | GAAGA | 4 cut(s) | 18, 84, 100, 671 |
| MfeI | CAATTG | 1 cut(s) | 576 |
| MflI | RGATCY | 2 cut(s) | 300, 635 |
| MluCI | AATT | 3 cut(s) | 576, 598, 675 |
| MlyI | GAGTC | 1 cut(s) | 335 |
| MmeI | TCCRAC | 1 cut(s) | 345 |
| MnlI | CCTC | 5 cut(s) | 21, 195, 519, 601, 641 |
| MseI | TTAA | 2 cut(s) | 356, 570 |
| MspCI | CTTAAG | 1 cut(s) | 355 |
| MunI | CAATTG | 1 cut(s) | 576 |
| MvnI | CGCG | 2 cut(s) | 263, 458 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 128, 433, 581 |
| NdeII | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| NlaIII | CATG | 1 cut(s) | 431 |
| NmuCI | GTSAC | 1 cut(s) | 55 |
| PfeI | GAWTC | 4 cut(s) | 278, 310, 328, 385 |
| PkrI | GCNGC | 1 cut(s) | 262 |
| PleI | GAGTC | 1 cut(s) | 335 |
| PpsI | GAGTC | 1 cut(s) | 335 |
| PshBI | ATTAAT | 1 cut(s) | 570 |
| PspPI | GGNCC | 2 cut(s) | 109, 417 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 634, 666 |
| PsuI | RGATCY | 2 cut(s) | 300, 635 |
| RsaI | GTAC | 2 cut(s) | 206, 266 |
| RsaNI | GTAC | 2 cut(s) | 205, 265 |
| SaqAI | TTAA | 2 cut(s) | 356, 570 |
| SatI | GCNGC | 1 cut(s) | 261 |
| Sau3AI | GATC | 5 cut(s) | 188, 300, 411, 635, 661 |
| Sau96I | GGNCC | 2 cut(s) | 109, 417 |
| SchI | GAGTC | 1 cut(s) | 335 |
| SfaNI | GCATC | 1 cut(s) | 109 |
| SinI | GGWCC | 2 cut(s) | 109, 417 |
| SmlI | CTYRAG | 2 cut(s) | 355, 392 |
| SmoI | CTYRAG | 2 cut(s) | 355, 392 |
| Sse9I | AATT | 3 cut(s) | 576, 598, 675 |
| SsiI | CCGC | 1 cut(s) | 261 |
| SspMI | CTAG | 2 cut(s) | 237, 408 |
| TaaI | ACNGT | 1 cut(s) | 244 |
| TaiI | ACGT | 1 cut(s) | 62 |
| TaqI | TCGA | 2 cut(s) | 49, 450 |
| TaqII | GACCGA | 1 cut(s) | 97 |
| TasI | AATT | 3 cut(s) | 576, 598, 675 |
| TauI | GCSGC | 1 cut(s) | 263 |
| TfiI | GAWTC | 4 cut(s) | 278, 310, 328, 385 |
| Tru1I | TTAA | 2 cut(s) | 356, 570 |
| Tru9I | TTAA | 2 cut(s) | 356, 570 |
| TscAI | CASTG | 1 cut(s) | 247 |
| TseFI | GTSAC | 1 cut(s) | 55 |
| Tsp45I | GTSAC | 1 cut(s) | 55 |
| TspDTI | ATGAA | 2 cut(s) | 180, 671 |
| TspRI | CASTG | 1 cut(s) | 247 |
| Vha464I | CTTAAG | 1 cut(s) | 355 |
| VpaK11BI | GGWCC | 2 cut(s) | 109, 417 |
| VspI | ATTAAT | 1 cut(s) | 570 |
| XapI | RAATTY | 1 cut(s) | 675 |
| XspI | CTAG | 2 cut(s) | 237, 408 |