AT4G14368

regulator of chromosome condensation (RCC1) family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0006555
Physical Location & Seq
Reverse (-)
8274085 .. 8278908
4824 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14368.1

Sequence Viewer

Length: 3321 bp
ATGAAGACAGATGGAATGGCAGATCCCTCTAGCTATGTCAATCATGACCGTGACATCGACCAAGCACTCGTTTCTTTGAAAAAAGGAACTCAATTACTTAAGTATAGCCGCAAAGGAAGGCCTAAATTTCGCTCATTCAGGCTTTCGCCGGATGAAACAACATTGTTTTGGTTATCACACGGAGAAGAAAAAGGTTTGAAGTTAGCTACAGTTTCACGAATTCTCCCAGGTCAAAGAACTGCTGTTTTTCGAAGATATTTACGTCCCGAAAAGGATTACTTGTCATTTTCTCTCATATATCACAACGGAGATAGATCTCTTGATCTGATTTGCAAAGACAAAGCTGAAACAGAGGTTTGGTTTGCAGGACTTAAGTCTTTAATTAGACAAAACCGTAACAAGCAAGCCAAAAGTGAGATCCCTGAGGTGAGTATACATGACAGTGATTGTTTCTCTACTGGTCGTCCTTCTACTGCATCTATAGATTTCGCACCAAACAATACTCGACGTGGAAGAACATCCATTGATTTAGGAATCCAGAACTCTCCAACAAAGTTTGGTAGCTCAGATGTGGGATATGAACGTGGAAACATGCTAAGACCAAGTACTGATGGTTTTCGAATTAGTGTCTCAAGCACACCAAGTTGTTCAACTGGAACTTCTGGTCCTGATGACATAGAATCCTTAGGAGATGTTTATGTCTGGGGAGAAGTTTGGAGCGACGGGATATCACCAGACGGGGTCGTAAACTCCACAACTGTAAAAATAGATGTATTGATTCCAAAACCCTTGGAATCAAATGTAGTACTTGATGTTCATCAGATAGCTTGCGGTGTAAGGCATATCGCTCTTGTGACAAGACAAGGTGAAGTCTTTACATGGGAAGAAGAAGCTGGAGGAAGGCTTGGACATGGTATTCAAGTCGACGTTTGTCGTCCAAAACTTGTTGAGTTTCTTGCTCTTACCAATATAGATTTTGTTGCTTGTGGAGAATATCATACTTGTGCTGTATCTACGTCCGGAGATTTGTTTACTTGGGGAGATGGAATCCATAATGTTGGACTTTTGGGACATGGAAGTGATCTTAGTCATTGGATACCGAAAAGAGTCTCTGGTCCTGTGGAAGGACTTCAAGTCTTGTCTGTTGCGTGTGGCACGTGGCATTCCGCGCTTGCGACTGCTAATGGAAAACTATTCACTTTTGGTGATGGAGCGTTTGGTGTTCTTGGACATGGAGATAGAGAGAGTGTTTCATACCCTAAAGAAGTGAAAATGTTGAGTGGTCTTAAAACCTTGAAAGTAGCTTGTGGCGTGTGGCATACGGTAGCTATAGTTGAAGTTATGAATCAGACCGGTACTAGTACCTCATCTAGAAAGTTGTTTACTTGGGGCGATGGTGATAAAAACAGGCTAGGACATGGAAATAAAGAGACTTATCTTCTTCCAACTTGTGTATCTTCACTAATTGACTACAACTTTAACCAAATCGCGTGTGGTCATACATTCACAGTTGCGCTCACAACCTCAGGACATGTTTTTACTATGGGAGGGACTTCACATGGTCAGCTTGGTAGCTCGAATTCTGATGGTAAACTGCCTTGCTTGGTTCAAGATCGATTGGTTGGTGAATTCGTTGAAGAAATATCATGTGGGGATCATCATGTTGCTGTCCTGACATCGAGAAGTGAAGTCTTTACTTGGGGAAAAGGTTCAAATGGAAGACTAGGACATGGGGACAAGGATGATCGAAAAACGCCAACATTAGTTGAAGCTCTAAGGGAGAGGCATGTGAAGAGTATATCATGTGGTTCCAACTTTACATCAAGTATATGCATCCATAAGTGGGTCTCAGGAGCTGATCAATCTGTTTGTTCTGGTTGTCGTCAAGCATTTGGTTTTACGAGAAAGAGGCATAATTGTTATAACTGCGGTTTAGTGCATTGCCATGCGTGTAGTTCCAAGAAAGCTTTGAAAGCAGCATTAGCTCCAACTCCAGGGAAACCACATCGAGTATGTGATGCTTGTTACACAAAACTTAAAGCTGGAGAGTCTGGTTATAACTCTAATGTTGCTAATAGAAATTCCACAACTCCTACACGGTCACTAGATGGGACAGGAAGACCAGACAGAGATATAAGGTCTTCAAGGATTCTACTGTCCCCCAAAACAGAACCAGTCAAGTATTCTGAGGTTAGGTCATCAAGATCTGAATCTTCTATTGTCAGAGCTTCACAAGTTCCAGCTCTCCAGCAACTTAGAGATGTTGCATTCCCAAGCTCTCTTAGCGCGATTCAAAATGCCTTTAAACCCGTTGCCTCATCTTCGACATCGACACTTCCTTCGGGTACAAGATCATCAAGAATATCAAGCCCTCCACGCAGTTCTGGATTTTCCAGGGGCATGATTGATACTTTGAAGAAATCTAACGGTGTTATAAACAAAGAAATGACAAAATTGCAAAGCCAGATTAAAAATTTGAAAGAGAAATGTGATAATCAAGGTACAGAGATCCAAAGACTAAAGAAAACAGCAAGAGAAGCTTCTGACTTAGCTGTAAAACATTCTTCAAAGCATAAGGCAGCAACAGAGGTCATGAAATCTGTCGCTGAACATTTGAGAGAGTTAAAAGAGAAACTACCTCCTGAAGTATCAAGATGTGAAGCTTTTGAATCCATGAATTCTCAAGCAGAAGCCTATCTAAATGCGAGCGAAGCATCTGAATCATGTTTACCTACAACATCCTTGGGAATGGGTCAACGAGATCCAACCCCTTCTACAAACACACAAGATCAAAACATAGAGGAAAAACAATCATCTAATGGAGGTAACATGAGATCTCAAGAACCTTCAGGGACAACAGAAGCTTCATCATCGTCTAAAGGAGGAGGGAAAGAACTTATCGAACAATTTGAACCGGGTGTTTATGTTACTTATGTATTGCACAAGAATGGCGGAAAGATATTTAGAAGAGTTAGATTCAGTTTCTTTGTAGCAAACGGAGATTTGATGAGCATCAAGCAGAAGAATGGTGGAATAGCAAAAAAGATAGGTTGCTTAAGAGGTATAGTCATCATGCTTCATCATCGAGTCCAACGGCTTCTGATTCAGTTCCAACACCAACTCAACCTCAACCACCAGCTTCTGATTCAGTTCCTACACCAACTCAACCTCAACCACCAGCTTCTGATTCAGTTCCTACACCAACTCAACCTCAACCACCAGCTTCTCCTACACAACCGAATTCTGATCAAGCAGAGGATTCAAAAGAAGTTCTTGATGAAAGCTAGTCATCATGTGTATAATAGCAGTTTGGCAAAGTAG

Protein Analysis

1106

Amino Acids

121.37

Weight (kDa)

9.27

Isoelectric Point (pI)

41.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_12 PF16457 21 - 128 6.9e-09 Pleckstrin homology domain
WD40_RLD PF25390 232 - 607 2.3e-73 RCC1-like domain
RCC1 PF00415 288 - 337 1.4e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 326 - 349 8.9e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 340 - 391 8.4e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 395 - 444 1.2e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 460 - 506 5.4e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 509 - 558 3.5e-06 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 563 - 607 2.3e-14 Regulator of chromosome condensation (RCC1) repeat
FYVE PF01363 614 - 680 1.6e-15 FYVE zinc finger
BRX_N PF13713 854 - 889 2e-13 Transcription factor BRX N-terminal domain
BRX PF08381 964 - 994 7.1e-10 Transcription factor regulating root and shoot growth via Pin3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1923, 2058, 2435
AccI GTMKAC 2 cut(s) 433, 924
AccII CGCG 3 cut(s) 1169, 1490, 2288
AccIII TCCGGA 1 cut(s) 1019
AciI CCGC 5 cut(s) 109, 831, 1167, 1929, 2952
AclWI GGATC 5 cut(s) 17, 412, 1662, 2503, 2756
AcsI RAATTY 8 cut(s) 125, 219, 1579, 1628, 2080, 2473, 2677, 3240
AcuI CTGAAG 2 cut(s) 2664, 2832
AcvI CACGTG 1 cut(s) 1158
AfaI GTAC 6 cut(s) 607, 807, 1357, 1363, 2347, 2503
AfiI CCNNNNNNNGG 3 cut(s) 1124, 1843, 1994
AflII CTTAAG 3 cut(s) 98, 371, 3055
AflIII ACRYGT 1 cut(s) 1531
AgeI ACCGGT 1 cut(s) 1352
AhdI GACNNNNNGTC 1 cut(s) 1133
AhlI ACTAGT 1 cut(s) 1358
AjiI CACGTC 1 cut(s) 509
AjnI CCWGG 3 cut(s) 226, 1993, 2393
AloI GAACNNNNNNTCC 2 cut(s) 649, 681
Alw26I GTCTC 4 cut(s) 634, 1114, 1424, 1852
AlwI GGATC 5 cut(s) 17, 412, 1662, 2503, 2756
AlwNI CAGNNNCTG 3 cut(s) 1856, 3142, 3184
Aor13HI TCCGGA 1 cut(s) 1019
AoxI GGCC 1 cut(s) 119
ApeKI GCWGC 2 cut(s) 1976, 2579
ApoI RAATTY 8 cut(s) 125, 219, 1579, 1628, 2080, 2473, 2677, 3240
ArsI GACNNNNNNTTYG 2 cut(s) 2323, 2355
AsiGI ACCGGT 1 cut(s) 1352
Asp700I GAANNNNTTC 2 cut(s) 1128, 1708
AspLEI GCGC 3 cut(s) 1171, 1516, 2288
AspS9I GGNCC 2 cut(s) 665, 1115
AsuC2I CCSGG 1 cut(s) 2916
AsuHPI GGTGA 6 cut(s) 439, 723, 878, 1217, 1409, 1637
AsuII TTCGAA 2 cut(s) 250, 619
AvaII GGWCC 2 cut(s) 665, 1115
AxyI CCTNAGG 3 cut(s) 423, 685, 1525
BaeI ACNNNNGTAYC 2 cut(s) 1437, 1470
BbrPI CACGTG 1 cut(s) 1158
BbsI GAAGAC 4 cut(s) 11, 1726, 2125, 2133
BbvI GCAGC 2 cut(s) 1988, 2591
BccI CCATC 7 cut(s) 5, 605, 1037, 1202, 1388, 1580, 2102
BceAI ACGGC 1 cut(s) 3110
BciT130I CCWGG 3 cut(s) 228, 1995, 2395
BciVI GTATCC 1 cut(s) 1089
BclI TGATCA 2 cut(s) 1858, 3246
BcnI CCSGG 1 cut(s) 2916
BcoDI GTCTC 4 cut(s) 634, 1114, 1424, 1852
BcuI ACTAGT 1 cut(s) 1358
BfaI CTAG 7 cut(s) 30, 1359, 1371, 1412, 1724, 2105, 3285
BfmI CTRYAG 3 cut(s) 207, 480, 1329
BfrI CTTAAG 3 cut(s) 98, 371, 3055
BfuI GTATCC 1 cut(s) 1089
BglII AGATCT 3 cut(s) 314, 2204, 2834
BisI GCNGC 3 cut(s) 109, 1977, 2580
BlsI GCNGC 3 cut(s) 110, 1978, 2581
BmcAI AGTACT 2 cut(s) 607, 807
Bme1390I CCNGG 4 cut(s) 228, 1995, 2395, 2916
Bme18I GGWCC 2 cut(s) 665, 1115
BmeRI GACNNNNNGTC 1 cut(s) 1133
BmgBI CACGTC 1 cut(s) 509
BmgT120I GGNCC 2 cut(s) 665, 1115
BmiI GGNNCC 1 cut(s) 1810
BmrFI CCNGG 4 cut(s) 228, 1995, 2395, 2916
BmsI GCATC 5 cut(s) 485, 1842, 2008, 2723, 3021
BoxI GACNNNNGTC 2 cut(s) 373, 930
BpiI GAAGAC 4 cut(s) 11, 1726, 2125, 2133
BpmI CTGGAG 4 cut(s) 915, 1977, 2064, 2231
Bpu14I TTCGAA 2 cut(s) 250, 619
BpuEI CTTGAG 3 cut(s) 616, 2667, 2823
BpuMI CCSGG 1 cut(s) 2916
Bsa29I ATCGAT 1 cut(s) 1615
BsaAI YACGTR 1 cut(s) 1158
BsaBI GATNNNNATC 3 cut(s) 816, 2209, 3011
BsaI GGTCTC 1 cut(s) 1852
BsaJI CCNNGG 5 cut(s) 226, 789, 1994, 2394, 2742
BsaWI WCCGGW 2 cut(s) 1019, 1352
BsaXI ACNNNNNCTCC 2 cut(s) 207, 237
Bsc4I CCNNNNNNNGG 3 cut(s) 1124, 1843, 1994
Bse118I RCCGGY 1 cut(s) 1352
Bse1I ACTGG 3 cut(s) 463, 658, 2174
Bse21I CCTNAGG 3 cut(s) 423, 685, 1525
Bse3DI GCAATG 1 cut(s) 1939
Bse8I GATNNNNATC 3 cut(s) 816, 2209, 3011
BseAI TCCGGA 1 cut(s) 1019
BseBI CCWGG 3 cut(s) 228, 1995, 2395
BseCI ATCGAT 1 cut(s) 1615
BseDI CCNNGG 5 cut(s) 226, 789, 1994, 2394, 2742
BseGI GGATG 5 cut(s) 157, 518, 1747, 1833, 2738
BseJI GATNNNNATC 3 cut(s) 816, 2209, 3011
BseLI CCNNNNNNNGG 3 cut(s) 1124, 1843, 1994
BseMI GCAATG 1 cut(s) 1939
BseMII CTCAG 5 cut(s) 414, 579, 1539, 1863, 2178
BseNI ACTGG 3 cut(s) 463, 658, 2174
BseRI GAGGAG 1 cut(s) 2898
BseXI GCAGC 2 cut(s) 1988, 2591
Bsh1236I CGCG 3 cut(s) 1169, 1490, 2288
BshFI GGCC 1 cut(s) 121
BshTI ACCGGT 1 cut(s) 1352
BshVI ATCGAT 1 cut(s) 1615
BsiSI CCGG 4 cut(s) 149, 1020, 1353, 2915
BslFI GGGAC 7 cut(s) 249, 1083, 1564, 1748, 2125, 2143, 2866
BslI CCNNNNNNNGG 3 cut(s) 1124, 1843, 1994
BsmAI GTCTC 4 cut(s) 634, 1114, 1424, 1852
BsmFI GGGAC 7 cut(s) 249, 1083, 1564, 1748, 2125, 2143, 2866
BsmI GAATGC 2 cut(s) 1162, 2267
BsnI GGCC 1 cut(s) 121
Bso31I GGTCTC 1 cut(s) 1852
Bsp119I TTCGAA 2 cut(s) 250, 619
Bsp13I TCCGGA 1 cut(s) 1019
BspACI CCGC 5 cut(s) 109, 831, 1167, 1929, 2952
BspANI GGCC 1 cut(s) 121
BspCNI CTCAG 5 cut(s) 415, 578, 1538, 1862, 2179
BspDI ATCGAT 1 cut(s) 1615
BspEI TCCGGA 1 cut(s) 1019
BspFNI CGCG 3 cut(s) 1169, 1490, 2288
BspHI TCATGA 2 cut(s) 43, 2592
BspLI GGNNCC 1 cut(s) 1810
BspPI GGATC 5 cut(s) 17, 412, 1662, 2503, 2756
BspT104I TTCGAA 2 cut(s) 250, 619
BspTI CTTAAG 3 cut(s) 98, 371, 3055
BspTNI GGTCTC 1 cut(s) 1852
BsrDI GCAATG 1 cut(s) 1939
BsrFI RCCGGY 1 cut(s) 1352
BsrI ACTGG 3 cut(s) 463, 658, 2174
BssAI RCCGGY 1 cut(s) 1352
BssECI CCNNGG 5 cut(s) 226, 789, 1994, 2394, 2742
BssNAI GTATAC 1 cut(s) 434
BssT1I CCWWGG 2 cut(s) 789, 2742
Bst1107I GTATAC 1 cut(s) 434
Bst2UI CCWGG 3 cut(s) 228, 1995, 2395
Bst6I CTCTTC 2 cut(s) 1787, 2962
BstAFI CTTAAG 3 cut(s) 98, 371, 3055
BstBAI YACGTR 1 cut(s) 1158
BstBI TTCGAA 2 cut(s) 250, 619
BstC8I GCNNGC 4 cut(s) 405, 829, 1173, 2707
BstENI CCTNNNNNAGG 1 cut(s) 1122
BstF5I GGATG 5 cut(s) 157, 518, 1747, 1833, 2738
BstFNI CGCG 3 cut(s) 1169, 1490, 2288
BstHHI GCGC 3 cut(s) 1171, 1516, 2288
BstMAI GTCTC 4 cut(s) 634, 1114, 1424, 1852
BstMWI GCNNNNNNNGC 7 cut(s) 1168, 1973, 1982, 2283, 2376, 2537, 2711
BstNI CCWGG 3 cut(s) 228, 1995, 2395
BstNSI RCATGY 3 cut(s) 595, 1535, 1790
BstPAI GACNNNNGTC 2 cut(s) 373, 930
BstSCI CCNGG 4 cut(s) 226, 1993, 2393, 2914
BstSFI CTRYAG 3 cut(s) 207, 480, 1329
BstUI CGCG 3 cut(s) 1169, 1490, 2288
BstV1I GCAGC 2 cut(s) 1988, 2591
BstV2I GAAGAC 4 cut(s) 11, 1726, 2125, 2133
BstX2I RGATCY 7 cut(s) 22, 314, 417, 2204, 2508, 2761, 2834
BstXI CCANNNNNNTGG 1 cut(s) 1058
BstYI RGATCY 7 cut(s) 22, 314, 417, 2204, 2508, 2761, 2834
BstZ17I GTATAC 1 cut(s) 434
Bsu15I ATCGAT 1 cut(s) 1615
Bsu36I CCTNAGG 3 cut(s) 423, 685, 1525
BsuI GTATCC 1 cut(s) 1089
BsuRI GGCC 1 cut(s) 121
BsuTUI ATCGAT 1 cut(s) 1615
BtgZI GCGATG 1 cut(s) 1407
BtrI CACGTC 1 cut(s) 509
BtsCI GGATG 5 cut(s) 157, 518, 1747, 1833, 2738
BtsIMutI CAGTG 1 cut(s) 448
Cac8I GCNNGC 4 cut(s) 405, 829, 1173, 2707
CaiI CAGNNNCTG 3 cut(s) 1856, 3142, 3184
CciI TCATGA 2 cut(s) 43, 2592
CfoI GCGC 3 cut(s) 1171, 1516, 2288
Cfr10I RCCGGY 1 cut(s) 1352
Cfr13I GGNCC 2 cut(s) 665, 1115
ClaI ATCGAT 1 cut(s) 1615
Csp6I GTAC 6 cut(s) 606, 806, 1356, 1362, 2346, 2502
CspAI ACCGGT 1 cut(s) 1352
CviQI GTAC 6 cut(s) 606, 806, 1356, 1362, 2346, 2502
DraI TTTAAA 1 cut(s) 2305
DriI GACNNNNNGTC 1 cut(s) 1133
Eam1104I CTCTTC 2 cut(s) 1787, 2962
Eam1105I GACNNNNNGTC 1 cut(s) 1133
EarI CTCTTC 2 cut(s) 1787, 2962
EciI GGCGGA 1 cut(s) 2967
Eco130I CCWWGG 2 cut(s) 789, 2742
Eco147I AGGCCT 1 cut(s) 121
Eco31I GGTCTC 1 cut(s) 1852
Eco32I GATATC 1 cut(s) 729
Eco47I GGWCC 2 cut(s) 665, 1115
Eco57I CTGAAG 2 cut(s) 2664, 2832
Eco72I CACGTG 1 cut(s) 1158
Eco81I CCTNAGG 3 cut(s) 423, 685, 1525
EcoNI CCTNNNNNAGG 1 cut(s) 1122
EcoRI GAATTC 5 cut(s) 219, 1579, 1628, 2677, 3240
EcoRII CCWGG 3 cut(s) 226, 1993, 2393
EcoRV GATATC 1 cut(s) 729
EcoT14I CCWWGG 2 cut(s) 789, 2742
EcoT22I ATGCAT 1 cut(s) 1835
ErhI CCWWGG 2 cut(s) 789, 2742
FalI AAGNNNNNCTT 6 cut(s) 263, 295, 2524, 2556, 3257, 3289
FaqI GGGAC 7 cut(s) 249, 1083, 1564, 1748, 2125, 2143, 2866
FbaI TGATCA 2 cut(s) 1858, 3246
FblI GTMKAC 2 cut(s) 433, 924
Fnu4HI GCNGC 3 cut(s) 109, 1977, 2580
FokI GGATG 5 cut(s) 164, 505, 1754, 1820, 2725
Fsp4HI GCNGC 3 cut(s) 109, 1977, 2580
FspBI CTAG 7 cut(s) 30, 1359, 1371, 1412, 1724, 2105, 3285
GlaI GCGC 3 cut(s) 1170, 1515, 2287
GluI GCNGC 3 cut(s) 109, 1977, 2580
GsuI CTGGAG 4 cut(s) 915, 1977, 2064, 2231
HaeIII GGCC 1 cut(s) 121
HapII CCGG 4 cut(s) 149, 1020, 1353, 2915
HhaI GCGC 3 cut(s) 1171, 1516, 2288
Hin6I GCGC 3 cut(s) 1169, 1514, 2286
HinP1I GCGC 3 cut(s) 1169, 1514, 2286
HincII GTYRAC 2 cut(s) 925, 2756
HindII GTYRAC 2 cut(s) 925, 2756
HindIII AAGCTT 4 cut(s) 1965, 2538, 2661, 2862
HpaII CCGG 4 cut(s) 149, 1020, 1353, 2915
HphI GGTGA 6 cut(s) 439, 723, 878, 1217, 1409, 1637
Hpy166II GTNNAC 8 cut(s) 434, 748, 925, 1032, 1383, 1592, 2729, 2756
Hpy8I GTNNAC 8 cut(s) 434, 748, 925, 1032, 1383, 1592, 2729, 2756
Hpy99I CGWCG 3 cut(s) 510, 725, 929
HpyAV CCTTC 7 cut(s) 111, 477, 894, 1118, 2349, 2781, 2856
HpyCH4IV ACGT 6 cut(s) 262, 508, 583, 927, 1016, 1157
HpyCH4V TGCA 8 cut(s) 333, 365, 476, 1833, 1939, 2267, 2458, 2941
HpyF10VI GCNNNNNNNGC 7 cut(s) 1168, 1973, 1982, 2283, 2376, 2537, 2711
HpySE526I ACGT 6 cut(s) 262, 508, 583, 927, 1016, 1157
HspAI GCGC 3 cut(s) 1169, 1514, 2286
Kpn2I TCCGGA 1 cut(s) 1019
Ksp22I TGATCA 2 cut(s) 1858, 3246
LmnI GCTCC 4 cut(s) 717, 1211, 1853, 1990
Lsp1109I GCAGC 2 cut(s) 1988, 2591
LweI GCATC 5 cut(s) 485, 1842, 2008, 2723, 3021
MaeI CTAG 7 cut(s) 30, 1359, 1371, 1412, 1724, 2105, 3285
MaeII ACGT 6 cut(s) 262, 508, 583, 927, 1016, 1157
MaeIII GTNAC 7 cut(s) 50, 395, 853, 2024, 2100, 2825, 2926
MflI RGATCY 7 cut(s) 22, 314, 417, 2204, 2508, 2761, 2834
MlyI GAGTC 3 cut(s) 1116, 2057, 3096
MmeI TCCRAC 8 cut(s) 572, 1039, 1469, 1836, 2012, 2789, 3115, 3136
Mph1103I ATGCAT 1 cut(s) 1835
MroI TCCGGA 1 cut(s) 1019
MroXI GAANNNNTTC 2 cut(s) 1128, 1708
MslI CAYNNNNRTG 6 cut(s) 48, 441, 1002, 1077, 1944, 2946
MspCI CTTAAG 3 cut(s) 98, 371, 3055
MspI CCGG 4 cut(s) 149, 1020, 1353, 2915
MspR9I CCNGG 4 cut(s) 228, 1995, 2395, 2916
Mva1269I GAATGC 2 cut(s) 1162, 2267
MvaI CCWGG 3 cut(s) 228, 1995, 2395
MvnI CGCG 3 cut(s) 1169, 1490, 2288
MwoI GCNNNNNNNGC 7 cut(s) 1168, 1973, 1982, 2283, 2376, 2537, 2711
NciI CCSGG 1 cut(s) 2916
NlaIV GGNNCC 1 cut(s) 1810
NmuCI GTSAC 3 cut(s) 50, 853, 2100
NsiI ATGCAT 1 cut(s) 1835
NspI RCATGY 3 cut(s) 595, 1535, 1790
NspV TTCGAA 2 cut(s) 250, 619
PagI TCATGA 2 cut(s) 43, 2592
PceI AGGCCT 1 cut(s) 121
PciI ACATGT 1 cut(s) 1531
PctI GAATGC 2 cut(s) 1162, 2267
PdmI GAANNNNTTC 2 cut(s) 1128, 1708
PflFI GACNNNGTC 1 cut(s) 740
PinAI ACCGGT 1 cut(s) 1352
PkrI GCNGC 3 cut(s) 110, 1978, 2581
PleI GAGTC 3 cut(s) 1115, 2056, 3095
PmaCI CACGTG 1 cut(s) 1158
PmlI CACGTG 1 cut(s) 1158
PpsI GAGTC 3 cut(s) 1115, 2056, 3095
Ppu21I YACGTR 1 cut(s) 1158
PscI ACATGT 1 cut(s) 1531
PshAI GACNNNNGTC 2 cut(s) 373, 930
PsiI TTATAA 3 cut(s) 1923, 2058, 2435
Psp6I CCWGG 3 cut(s) 226, 1993, 2393
PspCI CACGTG 1 cut(s) 1158
PspGI CCWGG 3 cut(s) 226, 1993, 2393
PspN4I GGNNCC 1 cut(s) 1810
PspPI GGNCC 2 cut(s) 665, 1115
PsrI GAACNNNNNNTAC 2 cut(s) 798, 830
PstNI CAGNNNCTG 3 cut(s) 1856, 3142, 3184
PsuI RGATCY 7 cut(s) 22, 314, 417, 2204, 2508, 2761, 2834
PsyI GACNNNGTC 1 cut(s) 740
RsaI GTAC 6 cut(s) 607, 807, 1357, 1363, 2347, 2503
RsaNI GTAC 6 cut(s) 606, 806, 1356, 1362, 2346, 2502
RseI CAYNNNNRTG 6 cut(s) 48, 441, 1002, 1077, 1944, 2946
SalI GTCGAC 1 cut(s) 923
SatI GCNGC 3 cut(s) 109, 1977, 2580
Sau96I GGNCC 2 cut(s) 665, 1115
ScaI AGTACT 2 cut(s) 607, 807
SchI GAGTC 3 cut(s) 1116, 2057, 3096
ScrFI CCNGG 4 cut(s) 228, 1995, 2395, 2916
SfaNI GCATC 5 cut(s) 485, 1842, 2008, 2723, 3021
SfcI CTRYAG 3 cut(s) 207, 480, 1329
SfuI TTCGAA 2 cut(s) 250, 619
SinI GGWCC 2 cut(s) 665, 1115
SmiMI CAYNNNNRTG 6 cut(s) 48, 441, 1002, 1077, 1944, 2946
SmlI CTYRAG 6 cut(s) 98, 371, 631, 2682, 2838, 3055
SmoI CTYRAG 6 cut(s) 98, 371, 631, 2682, 2838, 3055
SpeI ACTAGT 1 cut(s) 1358
SseBI AGGCCT 1 cut(s) 121
SsiI CCGC 5 cut(s) 109, 831, 1167, 1929, 2952
SspMI CTAG 7 cut(s) 30, 1359, 1371, 1412, 1724, 2105, 3285
StuI AGGCCT 1 cut(s) 121
StyD4I CCNGG 4 cut(s) 226, 1993, 2393, 2914
StyI CCWWGG 2 cut(s) 789, 2742
TaiI ACGT 6 cut(s) 265, 511, 586, 930, 1019, 1160
TatI WGTACW 2 cut(s) 605, 805
TauI GCSGC 1 cut(s) 111
TscAI CASTG 1 cut(s) 448
TseFI GTSAC 3 cut(s) 50, 853, 2100
TseI GCWGC 2 cut(s) 1976, 2579
Tsp45I GTSAC 3 cut(s) 50, 853, 2100
TspGWI ACGGA 3 cut(s) 195, 321, 3012
TspRI CASTG 1 cut(s) 448
Tth111I GACNNNGTC 1 cut(s) 740
Vha464I CTTAAG 3 cut(s) 98, 371, 3055
VpaK11BI GGWCC 2 cut(s) 665, 1115
XagI CCTNNNNNAGG 1 cut(s) 1122
XapI RAATTY 8 cut(s) 125, 219, 1579, 1628, 2080, 2473, 2677, 3240
XbaI TCTAGA 1 cut(s) 1370
XceI RCATGY 3 cut(s) 595, 1535, 1790
XcmI CCANNNNNNNNNTGG 1 cut(s) 1490
XmiI GTMKAC 2 cut(s) 433, 924
XmnI GAANNNNTTC 2 cut(s) 1128, 1708
XspI CTAG 7 cut(s) 30, 1359, 1371, 1412, 1724, 2105, 3285
ZrmI AGTACT 2 cut(s) 607, 807
Zsp2I ATGCAT 1 cut(s) 1835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.