Rroxscaffold_5G00338310

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0006555
Physical Location & Seq
Forward (+)
6468654 .. 6475006
6353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00338310.1

Sequence Viewer

Length: 3240 bp
ATGGCAGATCCTTCTATCTTTGGGAATATCGAGCGTGATTATGAGCAATCACTCATTGCATTAAAAAAAGGAACCCAGTTGATTAAGTACAGCCGCAAAGGAAAGCCAAAGCTTCGTCCATTCAGACTTTCTGCGGCTGTGTTTAGAAGATATTTGCGTCCAGAAAAGGATTACTTATCATTTTCTCTTCTATATAATAACGGTGAACGGTCACTTGATCTGATCTGCAAGGATAAAGCTGAGGTAGAGGCATGGATTGCTGGCCTTAAGGCACTAATTTCTAGAGGACAGCGTAATAGGCGTACAAAGAGTGATCTTACTGAAATTCACGACGGAAGTGAATCTGTTAGTGGCCGTCATTCTGGAGTGACCTTAAATGACACTTCAAGCCATGGTAGGGTATCTGTTGATTCTCGTGAATCAGTGAGTTTTGGAAGCTCAGATGTGGGTGCAGAACGTGCAAATATGCAACTAAGAACAAGTACAGGAGATGGTTTTCGAGTTAGTGTTTCAAGCACTCCTAGCTGCTCAAGTGGAGGGTCTGGACCTGATGACATAGAATCACTAGGAGATGTTTATGTGTGGGGAGAGATCTGGTCTGATGGAAACGTACCTGATGGGTCTGCAAATGTAATACCTATAAACACTGATGTGCTTATTCCAAAGCCCTTGGAGTCGAATGTTGTTCTTGATGTTCATCAAATTGCTTGTGGTGTTAGACATATTGCTCTTGTAACAAGGCAAGGTGAAGTTTTCACCTGGGGAGAGGAATCTGGTGGAAGACTTGGTCATGGGATTGATAGAGACTTTAGTCGTCCTCGCCTTGTTGAGTTCCTGGCTCTTAATAATGTAGAATTTGTTGCATGTGGCGAGTATCATTCATGTGCTGTATCTACGTCTGGTGATTTATTTACTTGGGGTGATGGTACACATAATGCTGGACTTCTTGGTCATGGAACTGATGTTAGCCACTGGCTACCTAAAAGGATTACTGGTTCTTTAGAAGGACTACAGGTTCTGTCGGTTGCATGTGGCACATGGCATTCAGCTTTGGCAACTTATAATGGCAAACTCTTTACATTTGGAGATGGAAAATTTGGAGTTTTGGGACATGGAGATCGAGAGAGTATTGCATATCCAAGGGAGGTGCAGTTATTGAGTGGGCTGAAGACTATAAAAGTAGCTTGTGGTGTTTGGCATACTGCAGCTATTGTAGAGGTTATGGGTCAGTCTGGTGTAAATGTTTCATCTCGAAAGCTGTTCACTTGGGGTGATGGTGATAAACATCGTTTAGGTCATGGAAGCAAGGACACATATCTTCTTCCTACCTGTGTCTCTTCACTTATCGACTATAATTTCCAGCAGCTAGCGTGTGGACACACAATGACTATTGCCCTCACCACATCTGGTCATGTGTTTACCATGGGTGGTACTGCATATGGTCAACTAGGAAATCCCAGTTCTGATGGGAAAGCACCTTGCTTAGTACAGGATAAATTGGTAGGTGAGTTTGTTGAAGAAATATCATGTGGAGCCCATCATGTTGCTGTCCTGACATCGAGAAGTGAAGTATTCACATGGGGCAGAGGTGCTAATGGAAGATTGGGACATGGGGACACCGAAGATCGGAGAACGCCAACTATGGTTGAAGCTCTGAAAGATAGGCATGTGAAAAGCATAGCATGTGGCTCAAACTTCACATCTAGTATATGTATCCATAAATGGGTTTCTGGAGCTGATCAATCAGTTTGCTCAGGTTGTCGACAGGCATTTGGTTTTACTAGGAAGAGGCATAACTGTTATAATTGTGGACTAGTCCATTGCCATGCTTGTAGTTCCAAAAAAGCACTGAGGGCCGCATTGGCTCCCACTCCTGGAAAACCGCATCGCGTATGTGATTCTTGTTATGCTAAGCTTAAATCTGCTGAGGCTGGGAATTCTAGTACTGTTAATAGGAGAGCTACAATCGCCCGCTCAATGGACAGAGATGGTCTTAGTAGGGGAGAGGCTAGATCTTCAAGGATTCTGCTTCCTCCCATCATAGAACCAGTGAAATATCGTGAGATTAAGTCAATGAAGGCTGGGGGCAGATCGGACTCTCCTTCTATAGTTAGGGCTTCCCAAGTTCCATCCCTTTTACAACTGAAAGATATTGCATTTCCAAGTTCATTGAGTGTTCTTCAAAATGCTTTGAGGCCTGCTATACCAGTAACACCTCAGTCTAATACTACAAGGTCAAGATCTAGTTCACCATATTCAAGGAGACCAAGCCCTCCACGGTCTGCAACTCCTATATTTTCTAGAAGTGTTATTGACAGTCTTAAAAGGACAAATGACAGTCTGATTCACGAACTATCAAAGTTGCAAACCCAGGTCAGAAGTCTGAAGCAGAAGTGTGATACTCAAGATCTGGAGATTAGAAAACTAAATAAAAATGCTAAAGAAGCTAGTTCATTAGCAGGAGAACAATTTTCCAAGTGCAGAGCCGTGAAGGAACTTGTCAAGTCCATAACAGAACAGATGAAGGAATTGGCAGACAAGTTGCCTCCTGAGGTTTTTGATAACGAGAACTTCGAATCATTGCGTGCTCAAGCAGAAGAATTTATAAACACATACAGTGAAAGATCAAGCTTAGACCATGATCAACAAGGTGCAGCTGATAAGTCTTCCTCAGTACCTGAGTCTTCTAAAATGGCAGAGAACAGAGTGGATGACCATGTAGTGACTGCTGACTCTCAAACCAGCTCAGGAAGCACCTCGAAGTCACATGAATCATCAACAATGCAGACCGAAGGACAAAGGGAAGTCATTGAACAATTTGAACCAGGTGTTTATGTAACTCTGCTTCAACTACCAAATGGTGCTAGGGCTTTCCGGCGTGTTAAATTCAGTAAACGGAGGTTTAGTTCGCAACAGGCAGAAGAATGGTGGACTAACAACAGAGAAAGGCTGCTTAGAAGATACAGTCAACCGAGGACAGCTCCTCTTCCTCCGAGTGTACCATCATCGTCCAGCACTACAGAACCTCCTGAAAATCAAAACAGCTCTGAGGCAGCCTCATCTTCAAATCAAAACAGTTCTGAAGCCGCCCCATCTTCAACTCAAAGCAGTTCTGAGGCAGCCCCATCTTCAAATCAAAACAGTTCTGAGGCAGCCTCATCTTCAAATCAAAACAACACTGAGGCAGCCTCATCTTCAAATCAAAACAACACTGAGGCAGCCTCATCTTCTGATACATAG

Protein Analysis

1079

Amino Acids

117.17

Weight (kDa)

8.59

Isoelectric Point (pI)

52.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_RLD PF25390 192 - 567 1.5e-77 RCC1-like domain
RCC1 PF00415 248 - 297 9.4e-12 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 287 - 311 1.7e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 300 - 351 1.6e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 355 - 404 1.1e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 420 - 466 1.5e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 469 - 518 7.4e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 523 - 567 2.7e-14 Regulator of chromosome condensation (RCC1) repeat
FYVE PF01363 574 - 640 2.1e-15 FYVE zinc finger
BRX_N PF13713 825 - 858 4.7e-12 Transcription factor BRX N-terminal domain
BRX PF08381 934 - 988 8.4e-24 Transcription factor regulating root and shoot growth via Pin3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1062, 1803, 2606
AasI GACNNNNNNGTC 1 cut(s) 948
AccBSI CCGCTC 1 cut(s) 1974
AccI GTMKAC 1 cut(s) 1762
AccII CGCG 1 cut(s) 1890
AciI CCGC 6 cut(s) 94, 134, 1857, 1883, 1972, 3087
AclWI GGATC 1 cut(s) 2
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 6 cut(s) 324, 854, 1094, 1936, 2600, 2885
AcuI CTGAAG 3 cut(s) 1187, 2405, 3102
AfiI CCNNNNNNNGG 5 cut(s) 397, 1626, 1723, 1874, 1978
AflII CTTAAG 1 cut(s) 266
AhlI ACTAGT 1 cut(s) 1813
AjnI CCWGG 5 cut(s) 758, 834, 1873, 2370, 2824
AleI CACNNNNGTG 1 cut(s) 650
AloI GAACNNNNNNTCC 6 cut(s) 979, 999, 1011, 1031, 2890, 2922
Alw21I GWGCWC 1 cut(s) 2590
Alw26I GTCTC 3 cut(s) 798, 1339, 2257
AlwI GGATC 1 cut(s) 2
AlwNI CAGNNNCTG 2 cut(s) 1018, 2678
AoxI GGCC 4 cut(s) 262, 352, 1854, 2195
ApoI RAATTY 6 cut(s) 324, 854, 1094, 1936, 2600, 2885
AspS9I GGNCC 2 cut(s) 545, 1854
AsuII TTCGAA 1 cut(s) 2574
AsuNHI GCTAGC 1 cut(s) 1366
AvaII GGWCC 1 cut(s) 545
AxyI CCTNAGG 1 cut(s) 2550
BanII GRGCYC 1 cut(s) 1537
BarI GAAGNNNNNNTAC 2 cut(s) 2829, 2861
BauI CACGAG 1 cut(s) 414
BbsI GAAGAC 4 cut(s) 787, 1175, 2658, 2676
Bbv12I GWGCWC 1 cut(s) 2590
BbvCI CCTCAGC 2 cut(s) 240, 1926
BceAI ACGGC 2 cut(s) 339, 2471
BciT130I CCWGG 5 cut(s) 760, 836, 1875, 2372, 2826
BciVI GTATCC 1 cut(s) 1724
BclI TGATCA 2 cut(s) 1738, 2641
BcoDI GTCTC 3 cut(s) 798, 1339, 2257
BcuI ACTAGT 1 cut(s) 1813
BfmI CTRYAG 4 cut(s) 1010, 1203, 2106, 3018
BfrI CTTAAG 1 cut(s) 266
BfuI GTATCC 1 cut(s) 1724
BglI GCCNNNNNGGC 1 cut(s) 1862
BglII AGATCT 4 cut(s) 591, 2012, 2240, 2407
BlpI GCTNAGC 1 cut(s) 1911
BmcAI AGTACT 1 cut(s) 1945
Bme1390I CCNGG 5 cut(s) 760, 836, 1875, 2372, 2826
Bme18I GGWCC 1 cut(s) 545
BmgT120I GGNCC 2 cut(s) 545, 1854
BmiI GGNNCC 3 cut(s) 73, 1534, 1866
BmrFI CCNGG 5 cut(s) 760, 836, 1875, 2372, 2826
BmrI ACTGGG 2 cut(s) 70, 1452
BmsI GCATC 1 cut(s) 1894
BmtI GCTAGC 1 cut(s) 1370
BmuI ACTGGG 2 cut(s) 70, 1452
BoxI GACNNNNGTC 1 cut(s) 810
BpiI GAAGAC 4 cut(s) 787, 1175, 2658, 2676
BpmI CTGGAG 3 cut(s) 384, 1752, 2432
Bpu10I CCTNAGC 4 cut(s) 240, 1753, 1926, 2746
Bpu1102I GCTNAGC 1 cut(s) 1911
Bpu14I TTCGAA 1 cut(s) 2574
BpuEI CTTGAG 3 cut(s) 514, 2388, 2574
BsaBI GATNNNNATC 2 cut(s) 696, 1284
BsaI GGTCTC 1 cut(s) 2257
BsaJI CCNNGG 8 cut(s) 391, 669, 759, 1139, 1422, 2276, 2370, 2972
BsaXI ACNNNNNCTCC 6 cut(s) 1136, 1166, 2890, 2920, 3010, 3040
Bsc4I CCNNNNNNNGG 5 cut(s) 397, 1626, 1723, 1874, 1978
Bse1I ACTGG 6 cut(s) 76, 977, 997, 1458, 2048, 2207
Bse21I CCTNAGG 1 cut(s) 2550
Bse3DI GCAATG 3 cut(s) 54, 1819, 2579
Bse8I GATNNNNATC 2 cut(s) 696, 1284
BseBI CCWGG 5 cut(s) 760, 836, 1875, 2372, 2826
BseDI CCNNGG 8 cut(s) 391, 669, 759, 1139, 1422, 2276, 2370, 2972
BseGI GGATG 2 cut(s) 2129, 2716
BseJI GATNNNNATC 2 cut(s) 696, 1284
BseLI CCNNNNNNNGG 5 cut(s) 397, 1626, 1723, 1874, 1978
BseMI GCAATG 3 cut(s) 54, 1819, 2579
BseNI ACTGG 6 cut(s) 76, 977, 997, 1458, 2048, 2207
BseRI GAGGAG 1 cut(s) 2973
BseYI CCCAGC 2 cut(s) 1931, 2081
BsgI GTGCAG 4 cut(s) 471, 1169, 2500, 2673
Bsh1236I CGCG 1 cut(s) 1890
BshFI GGCC 4 cut(s) 264, 354, 1856, 2197
BsiHKAI GWGCWC 1 cut(s) 2590
BsiSI CCGG 1 cut(s) 2875
BslFI GGGAC 3 cut(s) 1122, 1620, 1628
BslI CCNNNNNNNGG 5 cut(s) 397, 1626, 1723, 1874, 1978
BsmAI GTCTC 3 cut(s) 798, 1339, 2257
BsmFI GGGAC 3 cut(s) 1122, 1620, 1628
BsmI GAATGC 1 cut(s) 1042
BsnI GGCC 4 cut(s) 264, 354, 1856, 2197
Bso31I GGTCTC 1 cut(s) 2257
Bsp119I TTCGAA 1 cut(s) 2574
Bsp1286I GDGCHC 2 cut(s) 1537, 2590
Bsp1720I GCTNAGC 1 cut(s) 1911
Bsp19I CCATGG 2 cut(s) 391, 1422
BspACI CCGC 6 cut(s) 94, 134, 1857, 1883, 1972, 3087
BspANI GGCC 4 cut(s) 264, 354, 1856, 2197
BspFNI CGCG 1 cut(s) 1890
BspLI GGNNCC 3 cut(s) 73, 1534, 1866
BspMAI CTGCAG 1 cut(s) 1207
BspOI GCTAGC 1 cut(s) 1370
BspPI GGATC 1 cut(s) 2
BspT104I TTCGAA 1 cut(s) 2574
BspTI CTTAAG 1 cut(s) 266
BspTNI GGTCTC 1 cut(s) 2257
BsrBI CCGCTC 1 cut(s) 1974
BsrDI GCAATG 3 cut(s) 54, 1819, 2579
BsrI ACTGG 6 cut(s) 76, 977, 997, 1458, 2048, 2207
BssECI CCNNGG 8 cut(s) 391, 669, 759, 1139, 1422, 2276, 2370, 2972
BssSI CACGAG 1 cut(s) 414
BssT1I CCWWGG 4 cut(s) 391, 669, 1139, 1422
Bst2BI CACGAG 1 cut(s) 414
Bst2UI CCWGG 5 cut(s) 760, 836, 1875, 2372, 2826
Bst6I CTCTTC 4 cut(s) 192, 1342, 1781, 2991
BstAFI CTTAAG 1 cut(s) 266
BstAPI GCANNNNNTGC 2 cut(s) 257, 458
BstBI TTCGAA 1 cut(s) 2574
BstC8I GCNNGC 5 cut(s) 262, 1368, 1972, 2199, 2586
BstDSI CCRYGG 3 cut(s) 391, 1422, 2276
BstF5I GGATG 2 cut(s) 2129, 2716
BstFNI CGCG 1 cut(s) 1890
BstMAI GTCTC 3 cut(s) 798, 1339, 2257
BstMWI GCNNNNNNNGC 9 cut(s) 257, 298, 458, 522, 1853, 1862, 1967, 2444, 2751
BstNI CCWGG 5 cut(s) 760, 836, 1875, 2372, 2826
BstNSI RCATGY 4 cut(s) 867, 1032, 1670, 1686
BstPAI GACNNNNGTC 1 cut(s) 810
BstSCI CCNGG 5 cut(s) 758, 834, 1873, 2370, 2824
BstSFI CTRYAG 4 cut(s) 1010, 1203, 2106, 3018
BstUI CGCG 1 cut(s) 1890
BstV2I GAAGAC 4 cut(s) 787, 1175, 2658, 2676
BstX2I RGATCY 5 cut(s) 7, 591, 2012, 2240, 2407
BstYI RGATCY 5 cut(s) 7, 591, 2012, 2240, 2407
Bsu36I CCTNAGG 1 cut(s) 2550
BsuI GTATCC 1 cut(s) 1724
BsuRI GGCC 4 cut(s) 264, 354, 1856, 2197
BtgI CCRYGG 3 cut(s) 391, 1422, 2276
BtgZI GCGATG 1 cut(s) 1871
BtsCI GGATG 2 cut(s) 2129, 2716
BtsIMutI CAGTG 8 cut(s) 429, 645, 970, 1847, 2055, 2623, 3177, 3210
Cac8I GCNNGC 5 cut(s) 262, 1368, 1972, 2199, 2586
CaiI CAGNNNCTG 2 cut(s) 1018, 2678
Cfr13I GGNCC 2 cut(s) 545, 1854
CseI GACGC 1 cut(s) 146
CsiI ACCWGGT 1 cut(s) 2824
DrdI GACNNNNNNGTC 1 cut(s) 948
DseDI GACNNNNNNGTC 1 cut(s) 948
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 4 cut(s) 192, 1342, 1781, 2991
EarI CTCTTC 4 cut(s) 192, 1342, 1781, 2991
Eco130I CCWWGG 4 cut(s) 391, 669, 1139, 1422
Eco147I AGGCCT 1 cut(s) 2197
Eco24I GRGCYC 1 cut(s) 1537
Eco31I GGTCTC 1 cut(s) 2257
Eco47I GGWCC 1 cut(s) 545
Eco57I CTGAAG 3 cut(s) 1187, 2405, 3102
Eco81I CCTNAGG 1 cut(s) 2550
EcoRI GAATTC 1 cut(s) 1936
EcoRII CCWGG 5 cut(s) 758, 834, 1873, 2370, 2824
EcoT14I CCWWGG 4 cut(s) 391, 669, 1139, 1422
EcoT38I GRGCYC 1 cut(s) 1537
ErhI CCWWGG 4 cut(s) 391, 669, 1139, 1422
FalI AAGNNNNNCTT 2 cut(s) 158, 190
FaqI GGGAC 3 cut(s) 1122, 1620, 1628
FauI CCCGC 1 cut(s) 1979
FauNDI CATATG 1 cut(s) 1438
FbaI TGATCA 2 cut(s) 1738, 2641
FblI GTMKAC 1 cut(s) 1762
FokI GGATG 2 cut(s) 2116, 2723
FriOI GRGCYC 1 cut(s) 1537
GsaI CCCAGC 2 cut(s) 1935, 2085
GsuI CTGGAG 3 cut(s) 384, 1752, 2432
HaeIII GGCC 4 cut(s) 264, 354, 1856, 2197
HapII CCGG 1 cut(s) 2875
HgaI GACGC 1 cut(s) 146
HincII GTYRAC 3 cut(s) 1445, 1763, 2969
HindII GTYRAC 3 cut(s) 1445, 1763, 2969
HindIII AAGCTT 3 cut(s) 110, 1913, 2629
HpaII CCGG 1 cut(s) 2875
Hpy99I CGWCG 1 cut(s) 335
HpyAV CCTTC 7 cut(s) 21, 998, 2071, 2112, 2485, 2518, 2786
HpyCH4IV ACGT 3 cut(s) 457, 609, 896
HpyF10VI GCNNNNNNNGC 9 cut(s) 257, 298, 458, 522, 1853, 1862, 1967, 2444, 2751
HpySE526I ACGT 3 cut(s) 457, 609, 896
Ksp22I TGATCA 2 cut(s) 1738, 2641
LmnI GCTCC 4 cut(s) 1532, 1733, 1870, 2986
LweI GCATC 1 cut(s) 1894
MabI ACCWGGT 1 cut(s) 2824
MaeII ACGT 3 cut(s) 457, 609, 896
MaeIII GTNAC 7 cut(s) 210, 367, 733, 2209, 2722, 2763, 2836
MbiI CCGCTC 1 cut(s) 1974
MflI RGATCY 5 cut(s) 7, 591, 2012, 2240, 2407
MhlI GDGCHC 2 cut(s) 1537, 2590
MlyI GAGTC 4 cut(s) 683, 2090, 2690, 2726
MslI CAYNNNNRTG 3 cut(s) 650, 882, 1824
MspA1I CMGCKG 1 cut(s) 2657
MspCI CTTAAG 1 cut(s) 266
MspI CCGG 1 cut(s) 2875
MspR9I CCNGG 5 cut(s) 760, 836, 1875, 2372, 2826
Mva1269I GAATGC 1 cut(s) 1042
MvaI CCWGG 5 cut(s) 760, 836, 1875, 2372, 2826
MvnI CGCG 1 cut(s) 1890
MwoI GCNNNNNNNGC 9 cut(s) 257, 298, 458, 522, 1853, 1862, 1967, 2444, 2751
NcoI CCATGG 2 cut(s) 391, 1422
NdeI CATATG 1 cut(s) 1438
NheI GCTAGC 1 cut(s) 1366
NlaIV GGNNCC 3 cut(s) 73, 1534, 1866
NmuCI GTSAC 4 cut(s) 210, 367, 2722, 2763
NspI RCATGY 4 cut(s) 867, 1032, 1670, 1686
NspV TTCGAA 1 cut(s) 2574
OliI CACNNNNGTG 1 cut(s) 650
PceI AGGCCT 1 cut(s) 2197
PcsI WCGNNNNNNNCGW 1 cut(s) 2571
PctI GAATGC 1 cut(s) 1042
PflFI GACNNNGTC 1 cut(s) 786
PfoI TCCNGGA 1 cut(s) 1873
PleI GAGTC 4 cut(s) 682, 2090, 2689, 2726
PpsI GAGTC 4 cut(s) 682, 2090, 2689, 2726
PshAI GACNNNNGTC 1 cut(s) 810
PsiI TTATAA 3 cut(s) 1062, 1803, 2606
Psp6I CCWGG 5 cut(s) 758, 834, 1873, 2370, 2824
PspFI CCCAGC 2 cut(s) 1931, 2081
PspGI CCWGG 5 cut(s) 758, 834, 1873, 2370, 2824
PspN4I GGNNCC 3 cut(s) 73, 1534, 1866
PspPI GGNCC 2 cut(s) 545, 1854
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 2 cut(s) 1018, 2678
PsuI RGATCY 5 cut(s) 7, 591, 2012, 2240, 2407
PsyI GACNNNGTC 1 cut(s) 786
PvuII CAGCTG 1 cut(s) 2657
RseI CAYNNNNRTG 3 cut(s) 650, 882, 1824
SalI GTCGAC 1 cut(s) 1761
Sau96I GGNCC 2 cut(s) 545, 1854
ScaI AGTACT 1 cut(s) 1945
SchI GAGTC 4 cut(s) 683, 2090, 2690, 2726
ScrFI CCNGG 5 cut(s) 760, 836, 1875, 2372, 2826
SduI GDGCHC 2 cut(s) 1537, 2590
SexAI ACCWGGT 1 cut(s) 2824
SfaNI GCATC 1 cut(s) 1894
SfcI CTRYAG 4 cut(s) 1010, 1203, 2106, 3018
SfuI TTCGAA 1 cut(s) 2574
SinI GGWCC 1 cut(s) 545
SmiMI CAYNNNNRTG 3 cut(s) 650, 882, 1824
SmlI CTYRAG 4 cut(s) 266, 529, 2403, 2589
SmoI CTYRAG 4 cut(s) 266, 529, 2403, 2589
SpeI ACTAGT 1 cut(s) 1813
SseBI AGGCCT 1 cut(s) 2197
SsiI CCGC 6 cut(s) 94, 134, 1857, 1883, 1972, 3087
StuI AGGCCT 1 cut(s) 2197
StyD4I CCNGG 5 cut(s) 758, 834, 1873, 2370, 2824
StyI CCWWGG 4 cut(s) 391, 669, 1139, 1422
TaiI ACGT 3 cut(s) 460, 612, 899
TaqII GACCGA 1 cut(s) 2804
TatI WGTACW 4 cut(s) 87, 482, 1486, 1943
TauI GCSGC 4 cut(s) 96, 137, 1859, 3089
TscAI CASTG 8 cut(s) 429, 652, 977, 1854, 2055, 2623, 3184, 3217
TseFI GTSAC 4 cut(s) 210, 367, 2722, 2763
Tsp45I GTSAC 4 cut(s) 210, 367, 2722, 2763
TspDTI ATGAA 8 cut(s) 686, 870, 1236, 2090, 2157, 2442, 2537, 2784
TspGWI ACGGA 2 cut(s) 348, 2911
TspRI CASTG 8 cut(s) 429, 652, 977, 1854, 2055, 2623, 3184, 3217
Tth111I GACNNNGTC 1 cut(s) 786
Vha464I CTTAAG 1 cut(s) 266
VpaK11BI GGWCC 1 cut(s) 545
XapI RAATTY 6 cut(s) 324, 854, 1094, 1936, 2600, 2885
XbaI TCTAGA 2 cut(s) 281, 2300
XceI RCATGY 4 cut(s) 867, 1032, 1670, 1686
XmiI GTMKAC 1 cut(s) 1762
ZrmI AGTACT 1 cut(s) 1945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.