Rh4BG042300

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0006555
Physical Location & Seq
Forward (+)
7679132 .. 7685691
6560 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG042300.1

Sequence Viewer

Length: 3321 bp
ATGGCAGATCCTTCTATCTTTGGGAATATCGAGCGTGATTATGAGCAATCACTCATTGCATTAAAAAAAGGAACCCAGTTGATTAAGTACAGCCGGAAAGGAAAGCCAAAGCTTCGTCCATTCAGACTTTCTGCGGATGAAACCACTCTAGTCTGGTTATCACATGGAGAAGAACGACATCTGAAATTATCGACAGTATCTAGAATTATACCCGGACAGAGAACAGCTGTGTTTAGAAGATATTTGCGTCCAGAAAAGGATTACTTATCATTTTCTCTTCTATATAATAACGGTGAACGGTCACTTGATCTGGTCTGCAAGGATAAAGCTGAGGTAGAGGCATGGATTGCTGGCCTTAAGGCAATAATTTCTAGAGGACAGCGTAATAGGCGTACAAAGAGTGATCTTACTGAAATTCACGACGGAAGTGAATCTGTTAGTGGCCGTCATTCTGGAGTGACCTTAAATGACACTTCAAGCCATGGTAGGGTATCCGTTGATTCTCGTGAATCAGTGAGCTCAGATGTGGGTGCAGAACGTGCAAATATGCAACTAAGAACAAGTACAGGAGATGGTTTTCGAGTTAGTGTTTCAAGCACTCCTAGCTGCTCAAGTGGAGGGTCTGGACCTGATGACATAGAATCACTAGGAGATGTTTATGTGTGGGGAGAGATCTGGTCTGATGGAAATGTACCTGATGGATCTGCAAATGTAATACCTATAAACACTGATGTGCTTATTCCAAAGCCCTTGGAGTCGAATGTTGTTCTTGATGTTCATCAAATTGCTTGTGGTGTTAGACATATTGCTCTTGTAACAAGGCAAGGTGAAGTTTTCACCTGGGGAGAGGAATCTGGTGGAAGACTTGGTCATGGGATTGATAGAGACTTTAGTCGCCCTCGCCTTGTTGAGTTCCTGGCTCTTAATAATGTAGAATTTGTTGCATGTGGCGAGTATCATTCATGTGCTGTATCTACGTCTGGTGATTTATTTACTTGGGGTGATGGTACACATAATGCTGGACTTCTTGGTCATGGAACTGATGTTAGCCACTGGCTACCTAAAAGGATTACTGGTTCTTTAGAAGGACTGCAGGTTCTGTCGGTTGCATGTGGCACATGGCATTCAGCTTTGGCAACTTATAATGGCAAACTCTTTACGTTTGGAGATGGAAAATTTGGAGTTTTGGGACATGGAGATCGAGAGAGTATTGCATATCCAAGGGAGGTGCAGTTATTGAGTGGGCTGAAGACTATAAAAGTAGCTTGTGGTGTTTGGCATACTGCAGCTATTGTAGAGGTTATGGGTCAGTCTGGTGTAAATGTTTCATCTCGAAAGCTGTTCACTTGGGGTGATGGTGATAAACATCGTTTAGGTCATGGAAGCAAGGACACATATCTTCTTCCTACCTGTGTCTCTTCACTTATCGACTATAATTTCCAGCAGCTAGCGTGTGGACACACAATGACTATTGCCCTCACCACATCTGGTCATGTGTTTACCATGGGTGGTACTGCATATGGTCAACTAGGAAATCCTAGTTCTGATGGGAAAGCACCTTGCTTAGTACAGGATAAATTGGTAGGTGAGTTTGTTGAAGAAATATCATGTGGAGCCCATCATGTTGCTGTCCTGACATCGAGAAGTGAAGTATTCACATGGGGCAGAGGTGCTAATGGAAGACTGGGACATGGGGACACCGAAGATCGGAGAACGCCAACTATGGTTGAAGCTCTGAAAGATAGGCATGTGAAAAGCATATCATGTGGCTCAAACTTCACATCTAGTATATGTATCCATAAATGGGTTTCTGGAGCTGATCAATCAGTTTGCTCAGGTTGTCGACAGGCATTTGGTTTTACTAGGAAGAGGCATAACTGTTATAATTGTGGACTAGTCCATTGCCATGCTTGTAGTTCCAAAAAAGCACTGAGGGCTGCATTGGCTCCCACTCCTGGAAAACCGCATCGCGTATGTGATTCTTGTTATGCTAAGCTTAAATCTGCTGAGGCTGGGAATTCTAGTACTGTTAGTAGGAGAGCTACAATCGCCCGTTCAATGGACAGAGATGGTCTTAGTAGGGGAGAGGCTAGATCTTCAAGGATTCTGCTTCCTCCCATCATAGAACCAGTGAAATATCATGAGATTAAGTCAATGAAGGCTGGGGGCAGATCGGAATCTCCTTCTATAGTTAGGGCTTCCCAAGTTCCGTCCCTTTTACAACTGAAAGATATTGCATTTCCAAGTTCATTGAGTGTTCTTCAAAATGCTTTGAGGCCTGCTATACCAGTAACACCTCGGTCTAATACTGCAAGGTCAAGATCTAGTTCACCATATTCAAGGAGACCAAGCCCTCCACGGTCTGCAACTCCTATATTTTCTAGAAGTGTTATTGACAGTCTTAAAAGGACAAATGACAGTCTGATTCACGAACTATCAAAGTTGCAAACCCAGGTCAGAAGTCTGAAGCAGAAGTGTGATACTCAAGATCTGGAGATTCGAAAACTAAATAAAAATGCTAAAGAAGCTAGTTCATTAGCAGAAGAACAATTTTCCAAGTGCAGAGCCGTGAAGGAACTTGTCAAGTCCATAACAGAACAGATGAAAGAATTGGCAGACAAGTTGCCTCCTGAGGTTTTTGACAACGAGAACTTCGAATCATTGCGTGCTCAAGCAGAAGAATTTATAAACACATACAGTGAAAGATCAAGCTTAGACCATGATCAACAAGGTGCAGCTGATAAGTCTTCCTCGGTACCTGAGTCTTCAAAAATGGCAGAGAACAGAGTGGATGACCATGTAGTGACTGCTGACTCTCAAACCAGCTCAGCAAGCACCTCGAAGTCAAATGAATCATCAACAATGCAGACCGAAGGACAAAGGGAAGTCATTGAACAATTTGAACCAGGTGTTTATGTAACTCTGCTTCATCTACCAAATGGTGCTAGGGCTTTCCGGCGTGTTAAATTCAGTAAACGGAGGTTTAGTTCGCAACAGGCAGAAGAATGGTGGACTAACAACAGAGAAAGGCTGCTTAGAAGATACAGTCAACCGAGGACAGCTCCTCTTCCTCCAAGTGTACCATCATCGTCCAGCACTAGAGAACCTCCTGAAGATCAAAACAGCTCTGAGGCAGCCTCATCTTCAAATCAAAACAGTTCTGAGGCCGCCCCGTCTTCAAATCAAAACAGTTCTGAGGCAGCCCCATCTTCAAATCAAAACAGTTCTGAGGCAGCCTCATCTTCAAATCAAAACAACACTGAGGCAGCCTCATCTTCAAATCAAAACAACACTGAGGCAGCCTCATCTTCTGATACATAG

Protein Analysis

1106

Amino Acids

120.45

Weight (kDa)

8.52

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_12 PF16457 15 - 122 2.6e-08 Pleckstrin homology domain
WD40_RLD PF25390 219 - 594 1.2e-77 RCC1-like domain
RCC1 PF00415 275 - 324 9.7e-12 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 314 - 338 1.7e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 327 - 378 1.6e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 382 - 431 1.1e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 447 - 493 1.6e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 496 - 545 7.6e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 550 - 594 4.1e-14 Regulator of chromosome condensation (RCC1) repeat
FYVE PF01363 601 - 667 2.2e-15 FYVE zinc finger
BRX_N PF13713 852 - 885 4.8e-12 Transcription factor BRX N-terminal domain
BRX PF08381 961 - 1015 1e-23 Transcription factor regulating root and shoot growth via Pin3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1143, 1884, 2687
AasI GACNNNNNNGTC 1 cut(s) 1029
Acc36I ACCTGC 1 cut(s) 1084
Acc65I GGTACC 1 cut(s) 2755
AccB1I GGYRCC 1 cut(s) 2755
AccI GTMKAC 1 cut(s) 1843
AccII CGCG 1 cut(s) 1971
AciI CCGC 3 cut(s) 134, 1964, 3168
AclWI GGATC 2 cut(s) 2, 709
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 6 cut(s) 414, 935, 1175, 2017, 2681, 2966
AcuI CTGAAG 3 cut(s) 1268, 2486, 3132
AfiI CCNNNNNNNGG 5 cut(s) 487, 1707, 1804, 1955, 2059
AflII CTTAAG 1 cut(s) 356
AhlI ACTAGT 1 cut(s) 1894
AjnI CCWGG 5 cut(s) 839, 915, 1954, 2451, 2905
AleI CACNNNNGTG 1 cut(s) 731
AloI GAACNNNNNNTCC 6 cut(s) 1060, 1080, 1092, 1112, 2971, 3003
Alw21I GWGCWC 2 cut(s) 521, 2671
Alw26I GTCTC 3 cut(s) 879, 1420, 2338
AlwI GGATC 2 cut(s) 2, 709
AlwNI CAGNNNCTG 1 cut(s) 1099
AoxI GGCC 4 cut(s) 352, 442, 2276, 3165
ApoI RAATTY 6 cut(s) 414, 935, 1175, 2017, 2681, 2966
Asp718I GGTACC 1 cut(s) 2755
AspS9I GGNCC 1 cut(s) 626
AsuC2I CCSGG 1 cut(s) 213
AsuII TTCGAA 2 cut(s) 2500, 2655
AsuNHI GCTAGC 1 cut(s) 1447
AvaII GGWCC 1 cut(s) 626
AxyI CCTNAGG 1 cut(s) 2631
BaeI ACNNNNGTAYC 2 cut(s) 2747, 2780
BanI GGYRCC 1 cut(s) 2755
BanII GRGCYC 2 cut(s) 521, 1618
BarI GAAGNNNNNNTAC 2 cut(s) 2910, 2942
BauI CACGAG 1 cut(s) 504
BbsI GAAGAC 6 cut(s) 868, 1256, 1687, 2739, 2757, 3168
Bbv12I GWGCWC 2 cut(s) 521, 2671
BbvCI CCTCAGC 2 cut(s) 330, 2007
BceAI ACGGC 2 cut(s) 429, 2552
BcgI CGANNNNNNTGC 2 cut(s) 2820, 2854
BciT130I CCWGG 5 cut(s) 841, 917, 1956, 2453, 2907
BciVI GTATCC 2 cut(s) 502, 1805
BclI TGATCA 2 cut(s) 1819, 2722
BcnI CCSGG 1 cut(s) 213
BcoDI GTCTC 3 cut(s) 879, 1420, 2338
BcuI ACTAGT 1 cut(s) 1894
BfmI CTRYAG 3 cut(s) 1091, 1284, 2187
BfrI CTTAAG 1 cut(s) 356
BfuAI ACCTGC 1 cut(s) 1084
BfuI GTATCC 2 cut(s) 502, 1805
BglII AGATCT 4 cut(s) 672, 2093, 2321, 2488
BlpI GCTNAGC 2 cut(s) 1992, 2827
BmcAI AGTACT 1 cut(s) 2026
Bme1390I CCNGG 6 cut(s) 213, 841, 917, 1956, 2453, 2907
Bme18I GGWCC 1 cut(s) 626
BmgT120I GGNCC 1 cut(s) 626
BmiI GGNNCC 4 cut(s) 73, 1615, 1947, 2757
BmrFI CCNGG 6 cut(s) 213, 841, 917, 1956, 2453, 2907
BmrI ACTGGG 2 cut(s) 70, 1694
BmsI GCATC 1 cut(s) 1975
BmtI GCTAGC 1 cut(s) 1451
BmuI ACTGGG 2 cut(s) 70, 1694
BoxI GACNNNNGTC 1 cut(s) 891
BpiI GAAGAC 6 cut(s) 868, 1256, 1687, 2739, 2757, 3168
BpmI CTGGAG 3 cut(s) 474, 1833, 2513
Bpu10I CCTNAGC 3 cut(s) 330, 1834, 2007
Bpu1102I GCTNAGC 2 cut(s) 1992, 2827
Bpu14I TTCGAA 2 cut(s) 2500, 2655
BpuEI CTTGAG 3 cut(s) 595, 2469, 2655
BpuMI CCSGG 1 cut(s) 213
BsaBI GATNNNNATC 3 cut(s) 777, 1365, 2176
BsaI GGTCTC 1 cut(s) 2338
BsaXI ACNNNNNCTCC 4 cut(s) 1217, 1247, 2971, 3001
Bsc4I CCNNNNNNNGG 5 cut(s) 487, 1707, 1804, 1955, 2059
Bse1I ACTGG 6 cut(s) 76, 1058, 1078, 1689, 2129, 2288
Bse21I CCTNAGG 1 cut(s) 2631
Bse3DI GCAATG 3 cut(s) 54, 1900, 2660
Bse8I GATNNNNATC 3 cut(s) 777, 1365, 2176
BseBI CCWGG 5 cut(s) 841, 917, 1956, 2453, 2907
BseGI GGATG 2 cut(s) 142, 2797
BseJI GATNNNNATC 3 cut(s) 777, 1365, 2176
BseLI CCNNNNNNNGG 5 cut(s) 487, 1707, 1804, 1955, 2059
BseMI GCAATG 3 cut(s) 54, 1900, 2660
BseNI ACTGG 6 cut(s) 76, 1058, 1078, 1689, 2129, 2288
BseRI GAGGAG 1 cut(s) 3054
BseYI CCCAGC 2 cut(s) 2012, 2162
BsgI GTGCAG 4 cut(s) 552, 1250, 2581, 2754
Bsh1236I CGCG 1 cut(s) 1971
BshFI GGCC 4 cut(s) 354, 444, 2278, 3167
BshNI GGYRCC 1 cut(s) 2755
BsiHKAI GWGCWC 2 cut(s) 521, 2671
BsiSI CCGG 3 cut(s) 94, 213, 2956
BslFI GGGAC 4 cut(s) 1203, 1701, 1709, 2197
BslI CCNNNNNNNGG 5 cut(s) 487, 1707, 1804, 1955, 2059
BsmAI GTCTC 3 cut(s) 879, 1420, 2338
BsmFI GGGAC 4 cut(s) 1203, 1701, 1709, 2197
BsmI GAATGC 1 cut(s) 1123
BsnI GGCC 4 cut(s) 354, 444, 2278, 3167
Bso31I GGTCTC 1 cut(s) 2338
Bsp119I TTCGAA 2 cut(s) 2500, 2655
Bsp1286I GDGCHC 3 cut(s) 521, 1618, 2671
Bsp1720I GCTNAGC 2 cut(s) 1992, 2827
Bsp19I CCATGG 2 cut(s) 481, 1503
BspACI CCGC 3 cut(s) 134, 1964, 3168
BspANI GGCC 4 cut(s) 354, 444, 2278, 3167
BspFNI CGCG 1 cut(s) 1971
BspHI TCATGA 1 cut(s) 2140
BspLI GGNNCC 4 cut(s) 73, 1615, 1947, 2757
BspMAI CTGCAG 2 cut(s) 1095, 1288
BspMI ACCTGC 1 cut(s) 1084
BspOI GCTAGC 1 cut(s) 1451
BspPI GGATC 2 cut(s) 2, 709
BspT104I TTCGAA 2 cut(s) 2500, 2655
BspT107I GGYRCC 1 cut(s) 2755
BspTI CTTAAG 1 cut(s) 356
BspTNI GGTCTC 1 cut(s) 2338
BsrDI GCAATG 3 cut(s) 54, 1900, 2660
BsrI ACTGG 6 cut(s) 76, 1058, 1078, 1689, 2129, 2288
BssSI CACGAG 1 cut(s) 504
BssT1I CCWWGG 4 cut(s) 481, 750, 1220, 1503
Bst2BI CACGAG 1 cut(s) 504
Bst2UI CCWGG 5 cut(s) 841, 917, 1956, 2453, 2907
Bst6I CTCTTC 4 cut(s) 282, 1423, 1862, 3072
BstAFI CTTAAG 1 cut(s) 356
BstAPI GCANNNNNTGC 2 cut(s) 347, 539
BstBI TTCGAA 2 cut(s) 2500, 2655
BstC8I GCNNGC 5 cut(s) 352, 1449, 2280, 2667, 2833
BstDSI CCRYGG 3 cut(s) 481, 1503, 2357
BstF5I GGATG 2 cut(s) 142, 2797
BstFNI CGCG 1 cut(s) 1971
BstMAI GTCTC 3 cut(s) 879, 1420, 2338
BstMWI GCNNNNNNNGC 9 cut(s) 347, 388, 539, 603, 1934, 1943, 2048, 2525, 2832
BstNI CCWGG 5 cut(s) 841, 917, 1956, 2453, 2907
BstNSI RCATGY 3 cut(s) 948, 1113, 1751
BstPAI GACNNNNGTC 1 cut(s) 891
BstSCI CCNGG 6 cut(s) 211, 839, 915, 1954, 2451, 2905
BstSFI CTRYAG 3 cut(s) 1091, 1284, 2187
BstUI CGCG 1 cut(s) 1971
BstV2I GAAGAC 6 cut(s) 868, 1256, 1687, 2739, 2757, 3168
BstX2I RGATCY 6 cut(s) 7, 672, 701, 2093, 2321, 2488
BstYI RGATCY 6 cut(s) 7, 672, 701, 2093, 2321, 2488
Bsu36I CCTNAGG 1 cut(s) 2631
BsuI GTATCC 2 cut(s) 502, 1805
BsuRI GGCC 4 cut(s) 354, 444, 2278, 3167
BtgI CCRYGG 3 cut(s) 481, 1503, 2357
BtgZI GCGATG 1 cut(s) 1952
BtsCI GGATG 2 cut(s) 142, 2797
BtsIMutI CAGTG 8 cut(s) 519, 726, 1051, 1928, 2136, 2704, 3258, 3291
BveI ACCTGC 1 cut(s) 1084
Cac8I GCNNGC 5 cut(s) 352, 1449, 2280, 2667, 2833
CaiI CAGNNNCTG 1 cut(s) 1099
CciI TCATGA 1 cut(s) 2140
Cfr13I GGNCC 1 cut(s) 626
CseI GACGC 1 cut(s) 236
CsiI ACCWGGT 1 cut(s) 2905
DrdI GACNNNNNNGTC 1 cut(s) 1029
DseDI GACNNNNNNGTC 1 cut(s) 1029
EaeI YGGCCR 1 cut(s) 442
Eam1104I CTCTTC 4 cut(s) 282, 1423, 1862, 3072
EarI CTCTTC 4 cut(s) 282, 1423, 1862, 3072
Ecl136II GAGCTC 1 cut(s) 519
Eco130I CCWWGG 4 cut(s) 481, 750, 1220, 1503
Eco147I AGGCCT 1 cut(s) 2278
Eco24I GRGCYC 2 cut(s) 521, 1618
Eco31I GGTCTC 1 cut(s) 2338
Eco47I GGWCC 1 cut(s) 626
Eco53kI GAGCTC 1 cut(s) 519
Eco57I CTGAAG 3 cut(s) 1268, 2486, 3132
Eco81I CCTNAGG 1 cut(s) 2631
EcoICRI GAGCTC 1 cut(s) 519
EcoRI GAATTC 1 cut(s) 2017
EcoRII CCWGG 5 cut(s) 839, 915, 1954, 2451, 2905
EcoT14I CCWWGG 4 cut(s) 481, 750, 1220, 1503
EcoT38I GRGCYC 2 cut(s) 521, 1618
ErhI CCWWGG 4 cut(s) 481, 750, 1220, 1503
FalI AAGNNNNNCTT 2 cut(s) 248, 280
FaqI GGGAC 4 cut(s) 1203, 1701, 1709, 2197
FauNDI CATATG 1 cut(s) 1519
FbaI TGATCA 2 cut(s) 1819, 2722
FblI GTMKAC 1 cut(s) 1843
FokI GGATG 2 cut(s) 149, 2804
FriOI GRGCYC 2 cut(s) 521, 1618
GsaI CCCAGC 2 cut(s) 2016, 2166
GsuI CTGGAG 3 cut(s) 474, 1833, 2513
HaeIII GGCC 4 cut(s) 354, 444, 2278, 3167
HapII CCGG 3 cut(s) 94, 213, 2956
HgaI GACGC 1 cut(s) 236
HincII GTYRAC 3 cut(s) 1526, 1844, 3050
HindII GTYRAC 3 cut(s) 1526, 1844, 3050
HindIII AAGCTT 3 cut(s) 110, 1994, 2710
HpaII CCGG 3 cut(s) 94, 213, 2956
Hpy99I CGWCG 1 cut(s) 425
HpyAV CCTTC 6 cut(s) 21, 1079, 2152, 2193, 2566, 2867
HpyCH4IV ACGT 3 cut(s) 538, 977, 1160
HpyF10VI GCNNNNNNNGC 9 cut(s) 347, 388, 539, 603, 1934, 1943, 2048, 2525, 2832
HpySE526I ACGT 3 cut(s) 538, 977, 1160
KpnI GGTACC 1 cut(s) 2759
Ksp22I TGATCA 2 cut(s) 1819, 2722
LmnI GCTCC 4 cut(s) 1613, 1814, 1951, 3067
LweI GCATC 1 cut(s) 1975
MabI ACCWGGT 1 cut(s) 2905
MaeII ACGT 3 cut(s) 538, 977, 1160
MaeIII GTNAC 6 cut(s) 300, 457, 814, 2290, 2803, 2917
MflI RGATCY 6 cut(s) 7, 672, 701, 2093, 2321, 2488
MhlI GDGCHC 3 cut(s) 521, 1618, 2671
MlyI GAGTC 3 cut(s) 764, 2771, 2807
MseI TTAA 9 cut(s) 62, 84, 357, 464, 924, 1998, 2148, 2403, 2964
MslI CAYNNNNRTG 3 cut(s) 731, 963, 1905
MspA1I CMGCKG 2 cut(s) 227, 2738
MspCI CTTAAG 1 cut(s) 356
MspI CCGG 3 cut(s) 94, 213, 2956
MspR9I CCNGG 6 cut(s) 213, 841, 917, 1956, 2453, 2907
Mva1269I GAATGC 1 cut(s) 1123
MvaI CCWGG 5 cut(s) 841, 917, 1956, 2453, 2907
MvnI CGCG 1 cut(s) 1971
MwoI GCNNNNNNNGC 9 cut(s) 347, 388, 539, 603, 1934, 1943, 2048, 2525, 2832
NciI CCSGG 1 cut(s) 213
NcoI CCATGG 2 cut(s) 481, 1503
NdeI CATATG 1 cut(s) 1519
NheI GCTAGC 1 cut(s) 1447
NlaIV GGNNCC 4 cut(s) 73, 1615, 1947, 2757
NmuCI GTSAC 3 cut(s) 300, 457, 2803
NspI RCATGY 3 cut(s) 948, 1113, 1751
NspV TTCGAA 2 cut(s) 2500, 2655
OliI CACNNNNGTG 1 cut(s) 731
PagI TCATGA 1 cut(s) 2140
PceI AGGCCT 1 cut(s) 2278
PcsI WCGNNNNNNNCGW 1 cut(s) 2652
PctI GAATGC 1 cut(s) 1123
PflFI GACNNNGTC 1 cut(s) 867
PfoI TCCNGGA 1 cut(s) 1954
PleI GAGTC 3 cut(s) 763, 2770, 2807
PpsI GAGTC 3 cut(s) 763, 2770, 2807
PshAI GACNNNNGTC 1 cut(s) 891
PsiI TTATAA 3 cut(s) 1143, 1884, 2687
Psp124BI GAGCTC 1 cut(s) 521
Psp6I CCWGG 5 cut(s) 839, 915, 1954, 2451, 2905
PspFI CCCAGC 2 cut(s) 2012, 2162
PspGI CCWGG 5 cut(s) 839, 915, 1954, 2451, 2905
PspN4I GGNNCC 4 cut(s) 73, 1615, 1947, 2757
PspPI GGNCC 1 cut(s) 626
PstI CTGCAG 2 cut(s) 1095, 1288
PstNI CAGNNNCTG 1 cut(s) 1099
PsuI RGATCY 6 cut(s) 7, 672, 701, 2093, 2321, 2488
PsyI GACNNNGTC 1 cut(s) 867
PvuII CAGCTG 2 cut(s) 227, 2738
RseI CAYNNNNRTG 3 cut(s) 731, 963, 1905
SacI GAGCTC 1 cut(s) 521
SalI GTCGAC 1 cut(s) 1842
SaqAI TTAA 9 cut(s) 62, 84, 357, 464, 924, 1998, 2148, 2403, 2964
Sau96I GGNCC 1 cut(s) 626
ScaI AGTACT 1 cut(s) 2026
SchI GAGTC 3 cut(s) 764, 2771, 2807
ScrFI CCNGG 6 cut(s) 213, 841, 917, 1956, 2453, 2907
SduI GDGCHC 3 cut(s) 521, 1618, 2671
SexAI ACCWGGT 1 cut(s) 2905
SfaNI GCATC 1 cut(s) 1975
SfcI CTRYAG 3 cut(s) 1091, 1284, 2187
SfuI TTCGAA 2 cut(s) 2500, 2655
SinI GGWCC 1 cut(s) 626
SmiMI CAYNNNNRTG 3 cut(s) 731, 963, 1905
SmlI CTYRAG 4 cut(s) 356, 610, 2484, 2670
SmoI CTYRAG 4 cut(s) 356, 610, 2484, 2670
SpeI ACTAGT 1 cut(s) 1894
SseBI AGGCCT 1 cut(s) 2278
SsiI CCGC 3 cut(s) 134, 1964, 3168
SstI GAGCTC 1 cut(s) 521
StuI AGGCCT 1 cut(s) 2278
StyD4I CCNGG 6 cut(s) 211, 839, 915, 1954, 2451, 2905
StyI CCWWGG 4 cut(s) 481, 750, 1220, 1503
TaiI ACGT 3 cut(s) 541, 980, 1163
TaqII GACCGA 2 cut(s) 2289, 2885
TatI WGTACW 4 cut(s) 87, 563, 1567, 2024
TauI GCSGC 1 cut(s) 3170
Tru1I TTAA 9 cut(s) 62, 84, 357, 464, 924, 1998, 2148, 2403, 2964
Tru9I TTAA 9 cut(s) 62, 84, 357, 464, 924, 1998, 2148, 2403, 2964
TscAI CASTG 8 cut(s) 519, 733, 1058, 1935, 2136, 2704, 3265, 3298
TseFI GTSAC 3 cut(s) 300, 457, 2803
Tsp45I GTSAC 3 cut(s) 300, 457, 2803
TspGWI ACGGA 4 cut(s) 438, 484, 2199, 2992
TspRI CASTG 8 cut(s) 519, 733, 1058, 1935, 2136, 2704, 3265, 3298
Tth111I GACNNNGTC 1 cut(s) 867
Vha464I CTTAAG 1 cut(s) 356
VpaK11BI GGWCC 1 cut(s) 626
XapI RAATTY 6 cut(s) 414, 935, 1175, 2017, 2681, 2966
XbaI TCTAGA 3 cut(s) 200, 371, 2381
XceI RCATGY 3 cut(s) 948, 1113, 1751
XmiI GTMKAC 1 cut(s) 1843
ZrmI AGTACT 1 cut(s) 2026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.