Rh4DG044100

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0006555
Physical Location & Seq
Forward (+)
7155329 .. 7161743
6415 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG044100.1

Sequence Viewer

Length: 2985 bp
ATGGCAGATCCTTCTATCTTTGGGAATATCGAGCGTGATTATGAGCAATCACTCATTGCATTAAAAAAAGGAACCCAGTTGATTAAGTACAGCCGGAAAGGAAAGCCAAAGCTTCGACCATTCAGACTTTCTGCGGATGAAACCACTCTAGTCTGGTTATCACATGGAGAAGAACGACATCTGAAATTATCGACAGTCACTAGAATTATACCCGGACAGAGAACAGCTGTGTTTAGAAGATATTTGCGTCCAGAAAAGGATTACTTATCATTTTCTCTTCTATATAATAACGGTGAACGGTCACTTGATCTGATCTGCAAGGATAAAGCTGAGGTAGAGGCATGGATTGCTGGCCTTAAGGCACTAATTTCTAGAGGACAGCGTAATAGGCGTACAAAGAGTGATCTTACTGAAATTCACGACGGAAGTGAATCTGTTAGTGGCCGTCATTCTGGAGTGACCTTAAATGACACTTCAAGCCATGGTAGGGTATCCGTTGATTCTCGTGAATCAGTGAGTTTTGGAAGCTCAGATGTGGGTGCAGAACGTGCAAATATGCAACTAAGAACAAGTACAGGAGATGGTTTTCGAGTTAGTGTTTCAAGCACTCCTAGCTGCTCAAGTGGAGGGTCTGGACCTGATGACATAGAATCACTAGGAGATGTTTATGTGTGGGGAGAGATCTGGTCTGATGGAAATGTACCTGATGGGTCTGCAAATGTAATACCTATAAACACTGATGTGCTTATTCCAAAGCCCTTGGAGTCGAATGTTGTTCTTGATGTTCATCAAATTGCTTGTGGTGTTAGACATATTGCTCTTGTAACAAGGCAAGGTGAAGTTTTCACCTGGGGAGAGGAATCTGGTGGAAGACTTGGTCATGGGATTGATAGAGACTTTAGTCGTCCTCGCCTTGTTGAGTTCCTGGCTCTTAATAATGTAGAATTTGTTGCATGTGGGGAGTATCATTCATGTGCTGTATCTACGTCTGGTGATTTATTTACTTGGGGTGATGGTACACATAATGCTGGACTTCTTGGTCATGGAACTGATGTTAGCCACTGGCTACCTAAAAGGATTACTGGTTCTTTAGAAGGACTACAGGTTCTGTCGGTTGCATGTGGCACATGGCATTCAGCTTTGGCAACTTATAATGGCAAACTCTTTACATTTGGAGATGGAAAATTTGGAGTTTTGGGACATGGAGATCGAGAGAGTATTGCATATCCAAGGGAGGTGCAGTTATTGAGTGGGCTGAAGACTATAAAGGTAGCTTGTGGTGTTTGGCATACTGCAGCTATTGTAGAGGTTATGGGTCAGTCTGGTGTAAATGTTTCATCTCGAAAGCTGTTCACTTGGGGTGATGGTGATAAACATCGTTTAGGTCATGGTAGCAAGGACACATATCTTCTTCCTACCTGTGTCTCTTCACTTATCGACTATAATTTCCAGCAGCTAGCGTGTGGACACACAATGACTATTGCCCTCACCACATCTGGTCATGTGTTTACCATGGGTGGTACTGCATATGGTCAACTAGGAAATCCTAGTTCTGATGGGAAAACACCTTGCTTAGTACAGGATAAATTGGTAGGTGAGTTTGTTGAAGAAATATCATGTGGAGCCCATCATGTTGCTGTCCTGACATCGAGAAGTGAAGTATTCACATGGGGCAGAGGTGCTAATGGAAGATTGGGACATGGGGACACCGAAGATCGGAGAACGCCAACTATGGTTGAAGCTCTGAAAGATAGGCATGTGAAAAGCATATCATGTGGCTCAAACTTCACATCTAGTATATGTATCCATAAATGGGTTTCTGGAGCTGATCAATCAGTTTGCTCAGGTTGTCGACAGGCATTTGGTTTTACTAGGAAGAGGCATAACTGTTATAATTGTGGACTAGTCCATTGCCATGCTTGTAGTTCCAAAAAAGCACTGAGGGCTGCATTGGCTCCCACTCCTGGAAAACCACATCGCGTATGTGATTCTTGTTATGCTAAGCTTAAATCTGCTGAGGCTGGGAATTCTAGTAATGTTAGTAGGAGAGCTACAATCGCCCGTTCAATGGACAGAGATGGTCTTAGTAGGGGAGAGGCTAGATCTTCAAGGATACTGCTTCCTCCCATCATAGAACCCGTGACATATCGTGAGATTAAATCAATGAAGGCTGGGGGCAGATCGGAATCTCCTTCTATAGTTAGGGCTTCCCAAGTTCCATCCCTTTTACAACTGAAAGATATTGCATTTCCAAGTTCATTGAGTGTTCTTCAAAATGCTTTGAGGCCTGCTATACCAGTAACACCTCAGTCTAATACTGCAAGGTCAAGATCTAGTTCACCATATTCAAGGAGACCAAGCCCTCCACGGTCTGCAACTCCTATATTTTCTAGAAGTGTTATTGACAGTCTTAAAAGGACAAATGACAGTCTGATTCACGAACTATCAAAGTTGCAAACCCAGGTCAGAAGTCTGAAGCAGAAGTGTGATACTCAAGATCTGGAGATTCGAAAACTAAATAAAAATGCTAAAGAAGCTAGTTCATTAGCAGAAGAACAATTTTCCAAGTGCAGAGCCGTGAAGGAACTTGTCAAGTCCATAACAGAACAGATGAAGGAATTGGCAGACAAGTTGCCTCCTGAGGTTTTTGACAACGAGAACTTCGAATCATTGCGTGCTCAAGCAGAAGAATTTATAAACACATACAGTGAAAGATCAAGCTTAGACCATGATCAACAAGGTGCAGCTGATAAGTCTTCCTCGGTACCTGAGTCTTCTAAAATGGCAGAGAACAGAGTGGATGACCATGTAGTGACTGCTGACTCTCAAACCAGCTCAGGAAGCACCTCGAAGTCACATGAATCATCAACAATGCAGACCGAAGGACAAAGGGAACTCATTGAACAATTTGAACCAGGTGTTTATGTAACTCTGCTTCAACTACCAAATGGTGCTAGGGCTTTCCGGCGTGTTAAATTCAGGTAA

Protein Analysis

994

Amino Acids

108.58

Weight (kDa)

8.75

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_12 PF16457 15 - 123 3.6e-09 Pleckstrin homology domain
WD40_RLD PF25390 222 - 597 6.7e-78 RCC1-like domain
RCC1 PF00415 278 - 327 8.5e-12 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 317 - 341 1.5e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 330 - 381 1.4e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 385 - 434 9.9e-14 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 450 - 496 1.4e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 499 - 548 3.2e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 553 - 597 3.6e-14 Regulator of chromosome condensation (RCC1) repeat
FYVE PF01363 604 - 670 1.9e-15 FYVE zinc finger
BRX_N PF13713 855 - 888 4.3e-12 Transcription factor BRX N-terminal domain
BRX PF08381 964 - 993 1.2e-08 Transcription factor regulating root and shoot growth via Pin3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1152, 1893, 2696
AasI GACNNNNNNGTC 1 cut(s) 1038
Acc65I GGTACC 1 cut(s) 2764
AccB1I GGYRCC 1 cut(s) 2764
AccI GTMKAC 1 cut(s) 1852
AccII CGCG 1 cut(s) 1980
AciI CCGC 1 cut(s) 134
AclWI GGATC 1 cut(s) 2
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 6 cut(s) 414, 944, 1184, 2026, 2690, 2975
AcuI CTGAAG 2 cut(s) 1277, 2495
AfaI GTAC 8 cut(s) 89, 394, 574, 702, 1018, 1522, 1578, 2766
AfiI CCNNNNNNNGG 5 cut(s) 487, 1716, 1813, 1964, 2068
AflII CTTAAG 1 cut(s) 356
AhlI ACTAGT 1 cut(s) 1903
AjnI CCWGG 5 cut(s) 848, 924, 1963, 2460, 2914
AleI CACNNNNGTG 1 cut(s) 740
AloI GAACNNNNNNTCC 4 cut(s) 1069, 1089, 1101, 1121
Alw21I GWGCWC 1 cut(s) 2680
Alw26I GTCTC 3 cut(s) 888, 1429, 2347
AlwI GGATC 1 cut(s) 2
AlwNI CAGNNNCTG 1 cut(s) 1108
AoxI GGCC 3 cut(s) 352, 442, 2285
ApeKI GCWGC 5 cut(s) 615, 1295, 1453, 1946, 2744
ApoI RAATTY 6 cut(s) 414, 944, 1184, 2026, 2690, 2975
Asp718I GGTACC 1 cut(s) 2764
AspS9I GGNCC 1 cut(s) 635
AsuC2I CCSGG 1 cut(s) 213
AsuII TTCGAA 2 cut(s) 2509, 2664
AsuNHI GCTAGC 1 cut(s) 1456
AvaII GGWCC 1 cut(s) 635
AxyI CCTNAGG 1 cut(s) 2640
BaeI ACNNNNGTAYC 2 cut(s) 2756, 2789
BanI GGYRCC 1 cut(s) 2764
BanII GRGCYC 1 cut(s) 1627
BarI GAAGNNNNNNTAC 2 cut(s) 2919, 2951
BauI CACGAG 1 cut(s) 504
BbsI GAAGAC 4 cut(s) 877, 1265, 2748, 2766
Bbv12I GWGCWC 1 cut(s) 2680
BbvCI CCTCAGC 2 cut(s) 330, 2016
BbvI GCAGC 5 cut(s) 602, 1307, 1465, 1933, 2756
BceAI ACGGC 2 cut(s) 429, 2561
BciT130I CCWGG 5 cut(s) 850, 926, 1965, 2462, 2916
BciVI GTATCC 3 cut(s) 502, 1814, 2106
BclI TGATCA 2 cut(s) 1828, 2731
BcnI CCSGG 1 cut(s) 213
BcoDI GTCTC 3 cut(s) 888, 1429, 2347
BcuI ACTAGT 1 cut(s) 1903
BfmI CTRYAG 3 cut(s) 1100, 1293, 2196
BfrI CTTAAG 1 cut(s) 356
BfuI GTATCC 3 cut(s) 502, 1814, 2106
BglII AGATCT 4 cut(s) 681, 2102, 2330, 2497
BisI GCNGC 5 cut(s) 616, 1296, 1454, 1947, 2745
BlpI GCTNAGC 1 cut(s) 2001
BlsI GCNGC 5 cut(s) 617, 1297, 1455, 1948, 2746
Bme1390I CCNGG 6 cut(s) 213, 850, 926, 1965, 2462, 2916
Bme18I GGWCC 1 cut(s) 635
BmgT120I GGNCC 1 cut(s) 635
BmiI GGNNCC 4 cut(s) 73, 1624, 1956, 2766
BmrFI CCNGG 6 cut(s) 213, 850, 926, 1965, 2462, 2916
BmrI ACTGGG 1 cut(s) 70
BmtI GCTAGC 1 cut(s) 1460
BmuI ACTGGG 1 cut(s) 70
BoxI GACNNNNGTC 1 cut(s) 900
BpiI GAAGAC 4 cut(s) 877, 1265, 2748, 2766
BpmI CTGGAG 3 cut(s) 474, 1842, 2522
Bpu10I CCTNAGC 4 cut(s) 330, 1843, 2016, 2836
Bpu1102I GCTNAGC 1 cut(s) 2001
Bpu14I TTCGAA 2 cut(s) 2509, 2664
BpuEI CTTGAG 3 cut(s) 604, 2478, 2664
BpuMI CCSGG 1 cut(s) 213
BsaBI GATNNNNATC 3 cut(s) 786, 1374, 2185
BsaI GGTCTC 1 cut(s) 2347
BsaJI CCNNGG 8 cut(s) 481, 759, 849, 1229, 1512, 2366, 2460, 2760
BsaXI ACNNNNNCTCC 2 cut(s) 1226, 1256
Bsc4I CCNNNNNNNGG 5 cut(s) 487, 1716, 1813, 1964, 2068
Bse1I ACTGG 4 cut(s) 76, 1067, 1087, 2297
Bse21I CCTNAGG 1 cut(s) 2640
Bse3DI GCAATG 3 cut(s) 54, 1909, 2669
Bse8I GATNNNNATC 3 cut(s) 786, 1374, 2185
BseBI CCWGG 5 cut(s) 850, 926, 1965, 2462, 2916
BseDI CCNNGG 8 cut(s) 481, 759, 849, 1229, 1512, 2366, 2460, 2760
BseGI GGATG 3 cut(s) 142, 2219, 2806
BseJI GATNNNNATC 3 cut(s) 786, 1374, 2185
BseLI CCNNNNNNNGG 5 cut(s) 487, 1716, 1813, 1964, 2068
BseMI GCAATG 3 cut(s) 54, 1909, 2669
BseMII CTCAG 9 cut(s) 321, 543, 1857, 1931, 2007, 2321, 2631, 2760, 2850
BseNI ACTGG 4 cut(s) 76, 1067, 1087, 2297
BseXI GCAGC 5 cut(s) 602, 1307, 1465, 1933, 2756
BseYI CCCAGC 2 cut(s) 2021, 2171
BsgI GTGCAG 4 cut(s) 561, 1259, 2590, 2763
Bsh1236I CGCG 1 cut(s) 1980
BshFI GGCC 3 cut(s) 354, 444, 2287
BshNI GGYRCC 1 cut(s) 2764
BsiHKAI GWGCWC 1 cut(s) 2680
BsiSI CCGG 3 cut(s) 94, 213, 2965
BslFI GGGAC 3 cut(s) 1212, 1710, 1718
BslI CCNNNNNNNGG 5 cut(s) 487, 1716, 1813, 1964, 2068
BsmAI GTCTC 3 cut(s) 888, 1429, 2347
BsmFI GGGAC 3 cut(s) 1212, 1710, 1718
BsmI GAATGC 1 cut(s) 1132
BsnI GGCC 3 cut(s) 354, 444, 2287
Bso31I GGTCTC 1 cut(s) 2347
Bsp119I TTCGAA 2 cut(s) 2509, 2664
Bsp1286I GDGCHC 2 cut(s) 1627, 2680
Bsp1720I GCTNAGC 1 cut(s) 2001
Bsp19I CCATGG 2 cut(s) 481, 1512
BspACI CCGC 1 cut(s) 134
BspANI GGCC 3 cut(s) 354, 444, 2287
BspCNI CTCAG 9 cut(s) 322, 542, 1856, 1932, 2008, 2320, 2632, 2761, 2849
BspFNI CGCG 1 cut(s) 1980
BspLI GGNNCC 4 cut(s) 73, 1624, 1956, 2766
BspMAI CTGCAG 1 cut(s) 1297
BspOI GCTAGC 1 cut(s) 1460
BspPI GGATC 1 cut(s) 2
BspT104I TTCGAA 2 cut(s) 2509, 2664
BspT107I GGYRCC 1 cut(s) 2764
BspTI CTTAAG 1 cut(s) 356
BspTNI GGTCTC 1 cut(s) 2347
BsrDI GCAATG 3 cut(s) 54, 1909, 2669
BsrI ACTGG 4 cut(s) 76, 1067, 1087, 2297
BssECI CCNNGG 8 cut(s) 481, 759, 849, 1229, 1512, 2366, 2460, 2760
BssSI CACGAG 1 cut(s) 504
BssT1I CCWWGG 4 cut(s) 481, 759, 1229, 1512
Bst2BI CACGAG 1 cut(s) 504
Bst2UI CCWGG 5 cut(s) 850, 926, 1965, 2462, 2916
Bst4CI ACNGT 8 cut(s) 196, 293, 300, 1889, 2370, 2408, 2429, 2708
Bst6I CTCTTC 3 cut(s) 282, 1432, 1871
BstAFI CTTAAG 1 cut(s) 356
BstAPI GCANNNNNTGC 2 cut(s) 347, 548
BstBI TTCGAA 2 cut(s) 2509, 2664
BstC8I GCNNGC 4 cut(s) 352, 1458, 2289, 2676
BstDSI CCRYGG 3 cut(s) 481, 1512, 2366
BstF5I GGATG 3 cut(s) 142, 2219, 2806
BstFNI CGCG 1 cut(s) 1980
BstMAI GTCTC 3 cut(s) 888, 1429, 2347
BstMWI GCNNNNNNNGC 9 cut(s) 347, 388, 548, 612, 1943, 1952, 2057, 2534, 2841
BstNI CCWGG 5 cut(s) 850, 926, 1965, 2462, 2916
BstNSI RCATGY 3 cut(s) 957, 1122, 1760
BstPAI GACNNNNGTC 1 cut(s) 900
BstSCI CCNGG 6 cut(s) 211, 848, 924, 1963, 2460, 2914
BstSFI CTRYAG 3 cut(s) 1100, 1293, 2196
BstUI CGCG 1 cut(s) 1980
BstV1I GCAGC 5 cut(s) 602, 1307, 1465, 1933, 2756
BstV2I GAAGAC 4 cut(s) 877, 1265, 2748, 2766
BstX2I RGATCY 5 cut(s) 7, 681, 2102, 2330, 2497
BstYI RGATCY 5 cut(s) 7, 681, 2102, 2330, 2497
Bsu36I CCTNAGG 1 cut(s) 2640
BsuI GTATCC 3 cut(s) 502, 1814, 2106
BsuRI GGCC 3 cut(s) 354, 444, 2287
BtgI CCRYGG 3 cut(s) 481, 1512, 2366
BtgZI GCGATG 1 cut(s) 1961
BtsCI GGATG 3 cut(s) 142, 2219, 2806
BtsIMutI CAGTG 5 cut(s) 519, 735, 1060, 1937, 2713
Cac8I GCNNGC 4 cut(s) 352, 1458, 2289, 2676
CaiI CAGNNNCTG 1 cut(s) 1108
Cfr13I GGNCC 1 cut(s) 635
CseI GACGC 1 cut(s) 236
CsiI ACCWGGT 1 cut(s) 2914
Csp6I GTAC 8 cut(s) 88, 393, 573, 701, 1017, 1521, 1577, 2765
CviQI GTAC 8 cut(s) 88, 393, 573, 701, 1017, 1521, 1577, 2765
DrdI GACNNNNNNGTC 1 cut(s) 1038
DseDI GACNNNNNNGTC 1 cut(s) 1038
EaeI YGGCCR 1 cut(s) 442
Eam1104I CTCTTC 3 cut(s) 282, 1432, 1871
EarI CTCTTC 3 cut(s) 282, 1432, 1871
Eco130I CCWWGG 4 cut(s) 481, 759, 1229, 1512
Eco147I AGGCCT 1 cut(s) 2287
Eco24I GRGCYC 1 cut(s) 1627
Eco31I GGTCTC 1 cut(s) 2347
Eco47I GGWCC 1 cut(s) 635
Eco57I CTGAAG 2 cut(s) 1277, 2495
Eco81I CCTNAGG 1 cut(s) 2640
EcoRI GAATTC 1 cut(s) 2026
EcoRII CCWGG 5 cut(s) 848, 924, 1963, 2460, 2914
EcoT14I CCWWGG 4 cut(s) 481, 759, 1229, 1512
EcoT38I GRGCYC 1 cut(s) 1627
ErhI CCWWGG 4 cut(s) 481, 759, 1229, 1512
FalI AAGNNNNNCTT 2 cut(s) 248, 280
FaqI GGGAC 3 cut(s) 1212, 1710, 1718
FauNDI CATATG 1 cut(s) 1528
FbaI TGATCA 2 cut(s) 1828, 2731
FblI GTMKAC 1 cut(s) 1852
Fnu4HI GCNGC 5 cut(s) 616, 1296, 1454, 1947, 2745
FokI GGATG 3 cut(s) 149, 2206, 2813
FriOI GRGCYC 1 cut(s) 1627
Fsp4HI GCNGC 5 cut(s) 616, 1296, 1454, 1947, 2745
GluI GCNGC 5 cut(s) 616, 1296, 1454, 1947, 2745
GsaI CCCAGC 2 cut(s) 2025, 2175
GsuI CTGGAG 3 cut(s) 474, 1842, 2522
HaeIII GGCC 3 cut(s) 354, 444, 2287
HapII CCGG 3 cut(s) 94, 213, 2965
HgaI GACGC 1 cut(s) 236
HincII GTYRAC 2 cut(s) 1535, 1853
HindII GTYRAC 2 cut(s) 1535, 1853
HindIII AAGCTT 3 cut(s) 110, 2003, 2719
HpaII CCGG 3 cut(s) 94, 213, 2965
Hpy166II GTNNAC 9 cut(s) 296, 1019, 1353, 1466, 1509, 1535, 1853, 1901, 2339
Hpy8I GTNNAC 9 cut(s) 296, 1019, 1353, 1466, 1509, 1535, 1853, 1901, 2339
Hpy99I CGWCG 1 cut(s) 425
HpyAV CCTTC 7 cut(s) 21, 1088, 2161, 2202, 2575, 2608, 2876
HpyCH4III ACNGT 8 cut(s) 196, 293, 300, 1889, 2370, 2408, 2429, 2708
HpyCH4IV ACGT 2 cut(s) 547, 986
HpyF10VI GCNNNNNNNGC 9 cut(s) 347, 388, 548, 612, 1943, 1952, 2057, 2534, 2841
HpySE526I ACGT 2 cut(s) 547, 986
KpnI GGTACC 1 cut(s) 2768
Ksp22I TGATCA 2 cut(s) 1828, 2731
LmnI GCTCC 3 cut(s) 1622, 1823, 1960
Lsp1109I GCAGC 5 cut(s) 602, 1307, 1465, 1933, 2756
MabI ACCWGGT 1 cut(s) 2914
MaeII ACGT 2 cut(s) 547, 986
MaeIII GTNAC 9 cut(s) 196, 300, 457, 823, 2140, 2299, 2812, 2853, 2926
MflI RGATCY 5 cut(s) 7, 681, 2102, 2330, 2497
MhlI GDGCHC 2 cut(s) 1627, 2680
MlyI GAGTC 3 cut(s) 773, 2780, 2816
MseI TTAA 9 cut(s) 62, 84, 357, 464, 933, 2007, 2157, 2412, 2973
MslI CAYNNNNRTG 3 cut(s) 740, 972, 1914
MspA1I CMGCKG 2 cut(s) 227, 2747
MspCI CTTAAG 1 cut(s) 356
MspI CCGG 3 cut(s) 94, 213, 2965
MspR9I CCNGG 6 cut(s) 213, 850, 926, 1965, 2462, 2916
Mva1269I GAATGC 1 cut(s) 1132
MvaI CCWGG 5 cut(s) 850, 926, 1965, 2462, 2916
MvnI CGCG 1 cut(s) 1980
MwoI GCNNNNNNNGC 9 cut(s) 347, 388, 548, 612, 1943, 1952, 2057, 2534, 2841
NciI CCSGG 1 cut(s) 213
NcoI CCATGG 2 cut(s) 481, 1512
NdeI CATATG 1 cut(s) 1528
NheI GCTAGC 1 cut(s) 1456
NlaIV GGNNCC 4 cut(s) 73, 1624, 1956, 2766
NmuCI GTSAC 6 cut(s) 196, 300, 457, 2140, 2812, 2853
NspI RCATGY 3 cut(s) 957, 1122, 1760
NspV TTCGAA 2 cut(s) 2509, 2664
OliI CACNNNNGTG 1 cut(s) 740
PceI AGGCCT 1 cut(s) 2287
PcsI WCGNNNNNNNCGW 1 cut(s) 2661
PctI GAATGC 1 cut(s) 1132
PflFI GACNNNGTC 1 cut(s) 876
PfoI TCCNGGA 1 cut(s) 1963
PkrI GCNGC 5 cut(s) 617, 1297, 1455, 1948, 2746
PleI GAGTC 3 cut(s) 772, 2779, 2816
PpsI GAGTC 3 cut(s) 772, 2779, 2816
PshAI GACNNNNGTC 1 cut(s) 900
PsiI TTATAA 3 cut(s) 1152, 1893, 2696
Psp6I CCWGG 5 cut(s) 848, 924, 1963, 2460, 2914
PspFI CCCAGC 2 cut(s) 2021, 2171
PspGI CCWGG 5 cut(s) 848, 924, 1963, 2460, 2914
PspN4I GGNNCC 4 cut(s) 73, 1624, 1956, 2766
PspPI GGNCC 1 cut(s) 635
PstI CTGCAG 1 cut(s) 1297
PstNI CAGNNNCTG 1 cut(s) 1108
PsuI RGATCY 5 cut(s) 7, 681, 2102, 2330, 2497
PsyI GACNNNGTC 1 cut(s) 876
PvuII CAGCTG 2 cut(s) 227, 2747
RsaI GTAC 8 cut(s) 89, 394, 574, 702, 1018, 1522, 1578, 2766
RsaNI GTAC 8 cut(s) 88, 393, 573, 701, 1017, 1521, 1577, 2765
RseI CAYNNNNRTG 3 cut(s) 740, 972, 1914
SalI GTCGAC 1 cut(s) 1851
SaqAI TTAA 9 cut(s) 62, 84, 357, 464, 933, 2007, 2157, 2412, 2973
SatI GCNGC 5 cut(s) 616, 1296, 1454, 1947, 2745
Sau96I GGNCC 1 cut(s) 635
SchI GAGTC 3 cut(s) 773, 2780, 2816
ScrFI CCNGG 6 cut(s) 213, 850, 926, 1965, 2462, 2916
SduI GDGCHC 2 cut(s) 1627, 2680
SexAI ACCWGGT 1 cut(s) 2914
SfcI CTRYAG 3 cut(s) 1100, 1293, 2196
SfuI TTCGAA 2 cut(s) 2509, 2664
SinI GGWCC 1 cut(s) 635
SmiMI CAYNNNNRTG 3 cut(s) 740, 972, 1914
SmlI CTYRAG 4 cut(s) 356, 619, 2493, 2679
SmoI CTYRAG 4 cut(s) 356, 619, 2493, 2679
SpeI ACTAGT 1 cut(s) 1903
SseBI AGGCCT 1 cut(s) 2287
SsiI CCGC 1 cut(s) 134
StuI AGGCCT 1 cut(s) 2287
StyD4I CCNGG 6 cut(s) 211, 848, 924, 1963, 2460, 2914
StyI CCWWGG 4 cut(s) 481, 759, 1229, 1512
TaaI ACNGT 8 cut(s) 196, 293, 300, 1889, 2370, 2408, 2429, 2708
TaiI ACGT 2 cut(s) 550, 989
TaqII GACCGA 1 cut(s) 2894
TatI WGTACW 3 cut(s) 87, 572, 1576
Tru1I TTAA 9 cut(s) 62, 84, 357, 464, 933, 2007, 2157, 2412, 2973
Tru9I TTAA 9 cut(s) 62, 84, 357, 464, 933, 2007, 2157, 2412, 2973
TscAI CASTG 5 cut(s) 519, 742, 1067, 1944, 2713
TseFI GTSAC 6 cut(s) 196, 300, 457, 2140, 2812, 2853
TseI GCWGC 5 cut(s) 615, 1295, 1453, 1946, 2744
Tsp45I GTSAC 6 cut(s) 196, 300, 457, 2140, 2812, 2853
TspDTI ATGAA 9 cut(s) 153, 776, 960, 1326, 2180, 2247, 2532, 2627, 2874
TspGWI ACGGA 2 cut(s) 438, 484
TspRI CASTG 5 cut(s) 519, 742, 1067, 1944, 2713
Tth111I GACNNNGTC 1 cut(s) 876
Vha464I CTTAAG 1 cut(s) 356
VpaK11BI GGWCC 1 cut(s) 635
XapI RAATTY 6 cut(s) 414, 944, 1184, 2026, 2690, 2975
XbaI TCTAGA 2 cut(s) 371, 2390
XceI RCATGY 3 cut(s) 957, 1122, 1760
XmiI GTMKAC 1 cut(s) 1852
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.