Rw4G003690

Protein present in Fab1, YOTB, Vac1, and EEA1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0006555
Physical Location & Seq
Forward (+)
7223426 .. 7229566
6141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G003690.1

Sequence Viewer

Length: 3333 bp
ATGGCAGATCCTTCTATCTTTGGGAATATCGAGCGTGATTATGAGCAGTCATCACTCATTGCATTAAAAAAAGGAACCCAGTTGATTAAGTACAGCCGGAAAGGAAAGCCAAAGCTTCGTCCATTCAGACTTTCTGCGGATGAAACCACTCTAGTCTGGTTATCACATGGAGAAGAACGACATCTGAAATTATCGACAGTCACTAGAATTATACCCGGACAGAGAACAGCTGTGTTTAGAAGATATTTGCGTCCAGAAAAGGATTACTTATCATTTTCTCTTCTATATAATAACGGTGAACGGTCACTTGATCTGGTCTGCAAGGATAAAGCTGAGGTAGAGGCATGGATTGCTGGCCTTAAGGCACTAATTTCTAGAGGACAGCGTAATAGGCGTACAAAGAGTGATCTTACTGAAATTCACGACGGAAGTGAATCTGTTAGTGGCCGTCATTCTGGAGTGACCTTAAATGACACTTCTAGCCATGGTAGGGTATCCATTGATTCTCGTGAATCAGTGAGTTTTGGAAGCTCAGATGCGGGTGCAGAGCGTGCAAATATGCAACTAAGAACAAGTACAGGAGATGGTTTTCGAGTTAGTGTTTCAAGCACTCCTAGCTGCTCAAGTGGAGGGTCTGGACCTGATGACATAGAATCACTAGGAGATGTTTATGTGTGGGGAGAGATCTGGTCTGATGGAAATGTACCTGATGGGTCTGCAAATGTAATACCTATAAACACTGATGTGCTTATTCCAAAGCCCTTGGAGTCGAATGTTGTTCTTGATGTTCATCAAATTGCTTGTGGTGTTAGACATATTGCTCTTGTAACAAGGCAAGGTGAAGTTTTCACCTGGGGCGAGGAATCTGGTGGAAGACTTGGTCATGGGATTGATAGAGACTTTAGTCGCCCTCGCCTTGTTGAGTTCCTGGCTCTTAATAATGTAGAATTTGTTGCATGTGGCGAGTATCATTCATGTGCTGTATCTACGTCTGGTGATTTATTTACTTGGGGTGATGGTACACATAATGCTGGACTTCTTGGTCATGGTACTGATGTTAGCCACTGGCTACCTAAAAGGATTACTGGTTCTTTAGAAGGACTACAGGTTCTGTCGGTTGCATGTGGCACATGGCATTCAGCTCTGGCAACTTATAATGGCAAACTCTTTACATTTGGAGATGGAAAATTTGGAGTTTTGGGACATGGAGATCGAGAGAGTATTGCATATCCAAGGGAGGTGCAGTTATTGAGTGGGCTGAAGACTATAAAAGTAGCTTGTGGTGTTTGGCATACTGCAGCTATTGTAGAGGTTATGGGTCAGTCTGGTGTAAATGTTTCATCTCGAAAGCTGTTCACTTGGGGTGATGGTGATAAACATCGTTTAGGTCATGGAAGCAAGGACACATATCTTCTTCCTACCTGTGTCTCTTCACTTATCGACTATAATTTCCAGCAGCTAGCGTGTGGACACACAATGACTATTGCCCTCACCACATCTGGTCATGTGTTTACCATGGGTGGTACTGCATATGGTCAACTAGGAAATCCTAGTTCTGATGGGAAAGCACCTTGCTTAGTACAGGATAAATTGGTAGGTGAGTTTGTTGAAGAAATATCATGTGGATCCCATCATGTTGCTGTCCTGACATCGAGAAGTGAAGTATTCACATGGGGCAGAGGTGCTAATGGAAGACTGGGACATGGGGACACCGAAGATCGGAGAACGCCAACTATGGTTGAAGCTCTGAAAGATAGGCATGTGAAAAGCATATCATGTGGCTCAAACTTCACATCTAGTATATGTATCCATAAATGGGTTTCTGGAGCTGATCAGTCAGTTTGCTCAGGTTGTCGACAGGCATTTGGTTTTACTAGGAAGAGGCATAACTGTTATAATTGTGGACTAGTCCATTGCCATGCTTGTAGTTCCAAAAAAGCACTGAGGGCTGCATTGGCTCCCACTCCTGGAAAACCTCATCGCGTATGTGATTCTTGTTATGCTAAGCTTAAATCTGCTGAGGCTGGGAATTCTAGTACTGTTAGTAGGAGAGCTACAATCGCCCGTTCAATGGACAGAGATGGTCTTAGTAGGGGAGAGGCTAGATCTTCAAGGATTCTGCTTCCTCCCATCATAGAACCAGTGAAATATCATGAGATTAAGTCAATGAAGGCTGGGGGAAGATCGGAATCTCCTTCTATAGTTAGGGCTTCCCAAGTTCCATCCCTTTTACAACTGAAAGATATTGCATTTCCAAGTTCATTGAGTGTTCTTCAAAATGCTTTGAGGCCTGCTATACCAGTAACACCTCAGTCTAATACTGCAAGGTCAAGATCTAGTTCACCATATTCAAGGAGACCAAGCCCTCCACGGTCTGCAACTCCTATATTTTCTAGAAGTGTTATTGACAGTCTTAAAAGGACAAATGACAGTCTGATTCACGAACTATCAAAGTTGCAAACCCAGGTCAGAAGTCTGAAGCAGAAGTGTGATACTCAAGATCTGGAGATTCGAAAACTAAATAAAAATGCTAAAGAAGCTAGTTCATTAGCAGAAGAACAATTTTCCAAGTGCAGAGCCGTGAAGGAACTTGTCAAGTCCATAACAGAACAGATGAAGGAATTGGCAGACAAGTTGCCTCCTGAGGTTTTTGACAACGAGAACTTCGAATCATTGAGTGCTCAAGCAGAAGAATTTATAAACACATACAGTGAAAGATCAAGCTTAGACCATGATCAACAAGGTGCAGCTGATAAGTCTTCCTCGGTACCTGAGTCTTCAAAAATGGCAGAGAACAGAGTGGATGACCATGTAGTGACTGCTGACTCTCAAACCAGCTCAGCAAGCACCTCGAAGTCAAATGAATCATCAACAATGCAGACCGAAGGACAAAGGGAAGTCATTGAACAATTTGAACCAGGTGTTTATGTAACTCTGCTTCAACTACCAAATGGTGCTAGGGCTTTCCGGCGTGTTAAATTCAGTAAACGGAGGTTTAGTTCGCAACAGGCAGAAGAATGGTGGACCAACAACAGAGAAAGGCTGCTTAGAAGATACAGTCAACCTAGGACAGCTCCTCTTCCTCCAAGTGTACCATCATCGTCCAGCACTAGAGAACCTCCTGAAGATCAAAACAGCTCTGAGGCAGCCTCATCTTCAAATCAAAACAGTTCTGAGGCCGCCCCGTCTTCAAATCAAAACAGTTCTGAGGCAGCCCCATCTTCAAATCAAAACAGTTCTGAGGCAGCCTCATTTTCAAATCAAAACAACACTGAGGCAGCCTCATCTTCAAATCAAAACAACACTGAGGCAGCCTCATCTTCTGATACATAG

Protein Analysis

1110

Amino Acids

120.8

Weight (kDa)

8.38

Isoelectric Point (pI)

51.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_12 PF16457 18 - 124 9.5e-09 Pleckstrin homology domain
WD40_RLD PF25390 223 - 598 5.1e-78 RCC1-like domain
RCC1 PF00415 279 - 328 9.7e-12 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 318 - 342 1.7e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 331 - 382 1.6e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 386 - 435 1.1e-13 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 451 - 497 1.6e-11 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 500 - 549 7.3e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 554 - 598 4.1e-14 Regulator of chromosome condensation (RCC1) repeat
FYVE PF01363 605 - 671 2.2e-15 FYVE zinc finger
BRX_N PF13713 856 - 889 4.8e-12 Transcription factor BRX N-terminal domain
BRX PF08381 965 - 1019 8.7e-24 Transcription factor regulating root and shoot growth via Pin3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1155, 1896, 2699
AasI GACNNNNNNGTC 1 cut(s) 1041
Acc65I GGTACC 1 cut(s) 2767
AccB1I GGYRCC 1 cut(s) 2767
AccI GTMKAC 1 cut(s) 1855
AccII CGCG 1 cut(s) 1983
AciI CCGC 3 cut(s) 137, 539, 3180
AclWI GGATC 3 cut(s) 2, 1620, 1633
AcoI YGGCCR 1 cut(s) 445
AcsI RAATTY 6 cut(s) 417, 947, 1187, 2029, 2693, 2978
AcuI CTGAAG 3 cut(s) 1280, 2498, 3144
AfiI CCNNNNNNNGG 5 cut(s) 490, 1719, 1816, 1967, 2071
AflII CTTAAG 1 cut(s) 359
AhlI ACTAGT 1 cut(s) 1906
AjnI CCWGG 5 cut(s) 851, 927, 1966, 2463, 2917
AleI CACNNNNGTG 1 cut(s) 743
AloI GAACNNNNNNTCC 6 cut(s) 1072, 1092, 1104, 1124, 2983, 3015
Alw21I GWGCWC 1 cut(s) 2683
Alw26I GTCTC 3 cut(s) 891, 1432, 2350
AlwI GGATC 3 cut(s) 2, 1620, 1633
AlwNI CAGNNNCTG 1 cut(s) 1111
AoxI GGCC 4 cut(s) 355, 445, 2288, 3177
ApoI RAATTY 6 cut(s) 417, 947, 1187, 2029, 2693, 2978
Asp718I GGTACC 1 cut(s) 2767
AspA2I CCTAGG 1 cut(s) 3065
AspS9I GGNCC 2 cut(s) 638, 3024
AsuC2I CCSGG 1 cut(s) 216
AsuII TTCGAA 2 cut(s) 2512, 2667
AsuNHI GCTAGC 1 cut(s) 1459
AvaII GGWCC 2 cut(s) 638, 3024
AvrII CCTAGG 1 cut(s) 3065
AxyI CCTNAGG 1 cut(s) 2643
BaeI ACNNNNGTAYC 4 cut(s) 1041, 1074, 2759, 2792
BamHI GGATCC 1 cut(s) 1625
BanI GGYRCC 1 cut(s) 2767
BarI GAAGNNNNNNTAC 2 cut(s) 2922, 2954
BauI CACGAG 1 cut(s) 507
BbsI GAAGAC 6 cut(s) 880, 1268, 1699, 2751, 2769, 3180
Bbv12I GWGCWC 1 cut(s) 2683
BbvCI CCTCAGC 2 cut(s) 333, 2019
BceAI ACGGC 2 cut(s) 432, 2564
BcgI CGANNNNNNTGC 2 cut(s) 2832, 2866
BciT130I CCWGG 5 cut(s) 853, 929, 1968, 2465, 2919
BciVI GTATCC 2 cut(s) 505, 1817
BclI TGATCA 2 cut(s) 1831, 2734
BcnI CCSGG 1 cut(s) 216
BcoDI GTCTC 3 cut(s) 891, 1432, 2350
BcuI ACTAGT 1 cut(s) 1906
BfmI CTRYAG 3 cut(s) 1103, 1296, 2199
BfrI CTTAAG 1 cut(s) 359
BfuI GTATCC 2 cut(s) 505, 1817
BglII AGATCT 4 cut(s) 684, 2105, 2333, 2500
BlnI CCTAGG 1 cut(s) 3065
BlpI GCTNAGC 2 cut(s) 2004, 2839
BmcAI AGTACT 1 cut(s) 2038
Bme1390I CCNGG 6 cut(s) 216, 853, 929, 1968, 2465, 2919
Bme18I GGWCC 2 cut(s) 638, 3024
BmgT120I GGNCC 2 cut(s) 638, 3024
BmiI GGNNCC 4 cut(s) 76, 1627, 1959, 2769
BmrFI CCNGG 6 cut(s) 216, 853, 929, 1968, 2465, 2919
BmrI ACTGGG 2 cut(s) 73, 1706
BmsI GCATC 1 cut(s) 526
BmtI GCTAGC 1 cut(s) 1463
BmuI ACTGGG 2 cut(s) 73, 1706
BoxI GACNNNNGTC 1 cut(s) 903
BpiI GAAGAC 6 cut(s) 880, 1268, 1699, 2751, 2769, 3180
BplI GAGNNNNNCTC 8 cut(s) 3134, 3166, 3233, 3265, 3266, 3298, 3299, 3331
BpmI CTGGAG 3 cut(s) 477, 1845, 2525
Bpu10I CCTNAGC 3 cut(s) 333, 1846, 2019
Bpu1102I GCTNAGC 2 cut(s) 2004, 2839
Bpu14I TTCGAA 2 cut(s) 2512, 2667
BpuEI CTTGAG 3 cut(s) 607, 2481, 2667
BpuMI CCSGG 1 cut(s) 216
BsaBI GATNNNNATC 3 cut(s) 789, 1377, 2188
BsaI GGTCTC 1 cut(s) 2350
BsaJI CCNNGG 9 cut(s) 484, 762, 852, 1232, 1515, 2369, 2463, 2763, 3065
BsaXI ACNNNNNCTCC 4 cut(s) 1229, 1259, 2983, 3013
Bsc4I CCNNNNNNNGG 5 cut(s) 490, 1719, 1816, 1967, 2071
Bse1I ACTGG 6 cut(s) 79, 1070, 1090, 1701, 2141, 2300
Bse21I CCTNAGG 1 cut(s) 2643
Bse3DI GCAATG 2 cut(s) 57, 1912
Bse8I GATNNNNATC 3 cut(s) 789, 1377, 2188
BseBI CCWGG 5 cut(s) 853, 929, 1968, 2465, 2919
BseDI CCNNGG 9 cut(s) 484, 762, 852, 1232, 1515, 2369, 2463, 2763, 3065
BseGI GGATG 3 cut(s) 145, 2222, 2809
BseJI GATNNNNATC 3 cut(s) 789, 1377, 2188
BseLI CCNNNNNNNGG 5 cut(s) 490, 1719, 1816, 1967, 2071
BseMI GCAATG 2 cut(s) 57, 1912
BseNI ACTGG 6 cut(s) 79, 1070, 1090, 1701, 2141, 2300
BseRI GAGGAG 1 cut(s) 3066
BseYI CCCAGC 2 cut(s) 2024, 2174
BsgI GTGCAG 4 cut(s) 564, 1262, 2593, 2766
Bsh1236I CGCG 1 cut(s) 1983
BshFI GGCC 4 cut(s) 357, 447, 2290, 3179
BshNI GGYRCC 1 cut(s) 2767
BsiHKAI GWGCWC 1 cut(s) 2683
BsiSI CCGG 3 cut(s) 97, 216, 2968
BslFI GGGAC 3 cut(s) 1215, 1713, 1721
BslI CCNNNNNNNGG 5 cut(s) 490, 1719, 1816, 1967, 2071
BsmAI GTCTC 3 cut(s) 891, 1432, 2350
BsmFI GGGAC 3 cut(s) 1215, 1713, 1721
BsmI GAATGC 1 cut(s) 1135
BsnI GGCC 4 cut(s) 357, 447, 2290, 3179
Bso31I GGTCTC 1 cut(s) 2350
Bsp119I TTCGAA 2 cut(s) 2512, 2667
Bsp1286I GDGCHC 1 cut(s) 2683
Bsp1720I GCTNAGC 2 cut(s) 2004, 2839
Bsp19I CCATGG 2 cut(s) 484, 1515
BspACI CCGC 3 cut(s) 137, 539, 3180
BspANI GGCC 4 cut(s) 357, 447, 2290, 3179
BspFNI CGCG 1 cut(s) 1983
BspHI TCATGA 1 cut(s) 2152
BspLI GGNNCC 4 cut(s) 76, 1627, 1959, 2769
BspMAI CTGCAG 1 cut(s) 1300
BspOI GCTAGC 1 cut(s) 1463
BspPI GGATC 3 cut(s) 2, 1620, 1633
BspT104I TTCGAA 2 cut(s) 2512, 2667
BspT107I GGYRCC 1 cut(s) 2767
BspTI CTTAAG 1 cut(s) 359
BspTNI GGTCTC 1 cut(s) 2350
BsrDI GCAATG 2 cut(s) 57, 1912
BsrI ACTGG 6 cut(s) 79, 1070, 1090, 1701, 2141, 2300
BssECI CCNNGG 9 cut(s) 484, 762, 852, 1232, 1515, 2369, 2463, 2763, 3065
BssSI CACGAG 1 cut(s) 507
BssT1I CCWWGG 5 cut(s) 484, 762, 1232, 1515, 3065
Bst2BI CACGAG 1 cut(s) 507
Bst2UI CCWGG 5 cut(s) 853, 929, 1968, 2465, 2919
Bst6I CTCTTC 4 cut(s) 285, 1435, 1874, 3084
BstAFI CTTAAG 1 cut(s) 359
BstAPI GCANNNNNTGC 2 cut(s) 350, 551
BstBI TTCGAA 2 cut(s) 2512, 2667
BstC8I GCNNGC 5 cut(s) 355, 552, 1461, 2292, 2845
BstDSI CCRYGG 3 cut(s) 484, 1515, 2369
BstF5I GGATG 3 cut(s) 145, 2222, 2809
BstFNI CGCG 1 cut(s) 1983
BstMAI GTCTC 3 cut(s) 891, 1432, 2350
BstMWI GCNNNNNNNGC 9 cut(s) 350, 391, 551, 615, 1946, 1955, 2060, 2537, 2844
BstNI CCWGG 5 cut(s) 853, 929, 1968, 2465, 2919
BstNSI RCATGY 3 cut(s) 960, 1125, 1763
BstPAI GACNNNNGTC 1 cut(s) 903
BstSCI CCNGG 6 cut(s) 214, 851, 927, 1966, 2463, 2917
BstSFI CTRYAG 3 cut(s) 1103, 1296, 2199
BstUI CGCG 1 cut(s) 1983
BstV2I GAAGAC 6 cut(s) 880, 1268, 1699, 2751, 2769, 3180
BstX2I RGATCY 6 cut(s) 7, 684, 1625, 2105, 2333, 2500
BstYI RGATCY 6 cut(s) 7, 684, 1625, 2105, 2333, 2500
Bsu36I CCTNAGG 1 cut(s) 2643
BsuI GTATCC 2 cut(s) 505, 1817
BsuRI GGCC 4 cut(s) 357, 447, 2290, 3179
BtgI CCRYGG 3 cut(s) 484, 1515, 2369
BtgZI GCGATG 1 cut(s) 1964
BtsCI GGATG 3 cut(s) 145, 2222, 2809
BtsIMutI CAGTG 8 cut(s) 522, 738, 1063, 1940, 2148, 2716, 3270, 3303
Cac8I GCNNGC 5 cut(s) 355, 552, 1461, 2292, 2845
CaiI CAGNNNCTG 1 cut(s) 1111
CciI TCATGA 1 cut(s) 2152
Cfr13I GGNCC 2 cut(s) 638, 3024
CseI GACGC 1 cut(s) 239
CsiI ACCWGGT 1 cut(s) 2917
DrdI GACNNNNNNGTC 1 cut(s) 1041
DseDI GACNNNNNNGTC 1 cut(s) 1041
EaeI YGGCCR 1 cut(s) 445
Eam1104I CTCTTC 4 cut(s) 285, 1435, 1874, 3084
EarI CTCTTC 4 cut(s) 285, 1435, 1874, 3084
Eco130I CCWWGG 5 cut(s) 484, 762, 1232, 1515, 3065
Eco147I AGGCCT 1 cut(s) 2290
Eco31I GGTCTC 1 cut(s) 2350
Eco47I GGWCC 2 cut(s) 638, 3024
Eco57I CTGAAG 3 cut(s) 1280, 2498, 3144
Eco81I CCTNAGG 1 cut(s) 2643
EcoRI GAATTC 1 cut(s) 2029
EcoRII CCWGG 5 cut(s) 851, 927, 1966, 2463, 2917
EcoT14I CCWWGG 5 cut(s) 484, 762, 1232, 1515, 3065
ErhI CCWWGG 5 cut(s) 484, 762, 1232, 1515, 3065
FalI AAGNNNNNCTT 2 cut(s) 251, 283
FaqI GGGAC 3 cut(s) 1215, 1713, 1721
FauI CCCGC 1 cut(s) 532
FauNDI CATATG 1 cut(s) 1531
FbaI TGATCA 2 cut(s) 1831, 2734
FblI GTMKAC 1 cut(s) 1855
FokI GGATG 3 cut(s) 152, 2209, 2816
GsaI CCCAGC 2 cut(s) 2028, 2178
GsuI CTGGAG 3 cut(s) 477, 1845, 2525
HaeIII GGCC 4 cut(s) 357, 447, 2290, 3179
HapII CCGG 3 cut(s) 97, 216, 2968
HgaI GACGC 1 cut(s) 239
HincII GTYRAC 3 cut(s) 1538, 1856, 3062
HindII GTYRAC 3 cut(s) 1538, 1856, 3062
HindIII AAGCTT 3 cut(s) 113, 2006, 2722
HpaII CCGG 3 cut(s) 97, 216, 2968
Hpy99I CGWCG 1 cut(s) 428
HpyAV CCTTC 7 cut(s) 21, 1091, 2164, 2205, 2578, 2611, 2879
HpyCH4IV ACGT 1 cut(s) 989
HpyF10VI GCNNNNNNNGC 9 cut(s) 350, 391, 551, 615, 1946, 1955, 2060, 2537, 2844
HpySE526I ACGT 1 cut(s) 989
KpnI GGTACC 1 cut(s) 2771
Ksp22I TGATCA 2 cut(s) 1831, 2734
LmnI GCTCC 3 cut(s) 1826, 1963, 3079
LweI GCATC 1 cut(s) 526
MabI ACCWGGT 1 cut(s) 2917
MaeII ACGT 1 cut(s) 989
MaeIII GTNAC 7 cut(s) 199, 303, 460, 826, 2302, 2815, 2929
MflI RGATCY 6 cut(s) 7, 684, 1625, 2105, 2333, 2500
MhlI GDGCHC 1 cut(s) 2683
MlyI GAGTC 3 cut(s) 776, 2783, 2819
MseI TTAA 9 cut(s) 65, 87, 360, 467, 936, 2010, 2160, 2415, 2976
MslI CAYNNNNRTG 3 cut(s) 743, 975, 1917
MspA1I CMGCKG 2 cut(s) 230, 2750
MspCI CTTAAG 1 cut(s) 359
MspI CCGG 3 cut(s) 97, 216, 2968
MspR9I CCNGG 6 cut(s) 216, 853, 929, 1968, 2465, 2919
Mva1269I GAATGC 1 cut(s) 1135
MvaI CCWGG 5 cut(s) 853, 929, 1968, 2465, 2919
MvnI CGCG 1 cut(s) 1983
MwoI GCNNNNNNNGC 9 cut(s) 350, 391, 551, 615, 1946, 1955, 2060, 2537, 2844
NciI CCSGG 1 cut(s) 216
NcoI CCATGG 2 cut(s) 484, 1515
NdeI CATATG 1 cut(s) 1531
NheI GCTAGC 1 cut(s) 1459
NlaIV GGNNCC 4 cut(s) 76, 1627, 1959, 2769
NmuCI GTSAC 4 cut(s) 199, 303, 460, 2815
NspI RCATGY 3 cut(s) 960, 1125, 1763
NspV TTCGAA 2 cut(s) 2512, 2667
OliI CACNNNNGTG 1 cut(s) 743
PagI TCATGA 1 cut(s) 2152
PceI AGGCCT 1 cut(s) 2290
PcsI WCGNNNNNNNCGW 1 cut(s) 2664
PctI GAATGC 1 cut(s) 1135
PflFI GACNNNGTC 1 cut(s) 879
PfoI TCCNGGA 1 cut(s) 1966
PleI GAGTC 3 cut(s) 775, 2782, 2819
PpsI GAGTC 3 cut(s) 775, 2782, 2819
PshAI GACNNNNGTC 1 cut(s) 903
PsiI TTATAA 3 cut(s) 1155, 1896, 2699
Psp6I CCWGG 5 cut(s) 851, 927, 1966, 2463, 2917
PspFI CCCAGC 2 cut(s) 2024, 2174
PspGI CCWGG 5 cut(s) 851, 927, 1966, 2463, 2917
PspN4I GGNNCC 4 cut(s) 76, 1627, 1959, 2769
PspPI GGNCC 2 cut(s) 638, 3024
PstI CTGCAG 1 cut(s) 1300
PstNI CAGNNNCTG 1 cut(s) 1111
PsuI RGATCY 6 cut(s) 7, 684, 1625, 2105, 2333, 2500
PsyI GACNNNGTC 1 cut(s) 879
PvuII CAGCTG 2 cut(s) 230, 2750
RseI CAYNNNNRTG 3 cut(s) 743, 975, 1917
SalI GTCGAC 1 cut(s) 1854
SaqAI TTAA 9 cut(s) 65, 87, 360, 467, 936, 2010, 2160, 2415, 2976
Sau96I GGNCC 2 cut(s) 638, 3024
ScaI AGTACT 1 cut(s) 2038
SchI GAGTC 3 cut(s) 776, 2783, 2819
ScrFI CCNGG 6 cut(s) 216, 853, 929, 1968, 2465, 2919
SduI GDGCHC 1 cut(s) 2683
SexAI ACCWGGT 1 cut(s) 2917
SfaNI GCATC 1 cut(s) 526
SfcI CTRYAG 3 cut(s) 1103, 1296, 2199
SfuI TTCGAA 2 cut(s) 2512, 2667
SinI GGWCC 2 cut(s) 638, 3024
SmiMI CAYNNNNRTG 3 cut(s) 743, 975, 1917
SmlI CTYRAG 4 cut(s) 359, 622, 2496, 2682
SmoI CTYRAG 4 cut(s) 359, 622, 2496, 2682
SpeI ACTAGT 1 cut(s) 1906
SseBI AGGCCT 1 cut(s) 2290
SsiI CCGC 3 cut(s) 137, 539, 3180
StuI AGGCCT 1 cut(s) 2290
StyD4I CCNGG 6 cut(s) 214, 851, 927, 1966, 2463, 2917
StyI CCWWGG 5 cut(s) 484, 762, 1232, 1515, 3065
TaiI ACGT 1 cut(s) 992
TaqII GACCGA 1 cut(s) 2897
TatI WGTACW 4 cut(s) 90, 575, 1579, 2036
TauI GCSGC 1 cut(s) 3182
Tru1I TTAA 9 cut(s) 65, 87, 360, 467, 936, 2010, 2160, 2415, 2976
Tru9I TTAA 9 cut(s) 65, 87, 360, 467, 936, 2010, 2160, 2415, 2976
TscAI CASTG 8 cut(s) 522, 745, 1070, 1947, 2148, 2716, 3277, 3310
TseFI GTSAC 4 cut(s) 199, 303, 460, 2815
Tsp45I GTSAC 4 cut(s) 199, 303, 460, 2815
TspDTI ATGAA 9 cut(s) 156, 779, 963, 1329, 2183, 2250, 2535, 2630, 2877
TspGWI ACGGA 2 cut(s) 441, 3004
TspRI CASTG 8 cut(s) 522, 745, 1070, 1947, 2148, 2716, 3277, 3310
Tth111I GACNNNGTC 1 cut(s) 879
Vha464I CTTAAG 1 cut(s) 359
VpaK11BI GGWCC 2 cut(s) 638, 3024
XapI RAATTY 6 cut(s) 417, 947, 1187, 2029, 2693, 2978
XbaI TCTAGA 2 cut(s) 374, 2393
XceI RCATGY 3 cut(s) 960, 1125, 1763
XmaJI CCTAGG 1 cut(s) 3065
XmiI GTMKAC 1 cut(s) 1855
ZrmI AGTACT 1 cut(s) 2038
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.