AT4G14713

Protein TIFY 4B-like isoform X1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
8426677 .. 8429720
3044 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14713.1

Sequence Viewer

Length: 942 bp
ATGGATGTCGGAGTTTCACCGGCGAAGTCTATACTTGCGAAACCTCTGAAGCTACTCACTGAAGAGGACATTTCTCAGCTCACTCGCGAAGACTGCCGCAAATTCCTCAAAGACAAAGGAATGCGAAGACCGTCGTGGAACAAATCTCAGGCGATCCAGCAAGTTTTATCTCTTAAAGCTCTCTATGAGCCTGGAGACGATTCCGGCGCCGGTATCTTCCGCAAGATCCTCGTTTCTCAGCCAGTAAATCCGCCTCGCGTCACAACAACGTTGATTGAGCCAAGCAACGAGCTGGAAGCTTGTGGCCGGGTTTCTTATCCGGAAGATAACGGCGCGTGCCATAGAATGGATTCTCCAAGATCAGCTGAGTTTTCCGGTGGGTCTGGTCACTTTGTATCCGAGAAAGATGGCCACAAGACGACTATTTCTCCCAGAAGCCCAGCTGAAACAAGTGAGCTCGTTGGGCAAATGACGATATTCTATAGTGGAAAAGTGAATGTGTATGATGGAATACCACCTGAAAAGGCCCGGTCAATCATGCACTTTGCAGCCAATCCAATTGATTTGCCTGAAAACGGTATTTTTGCTTCCAGTAGAATGATTTCAAAGCTCATAAGTAAAGAGAAGATGATGGAACTTCCCCAAAAAGGCCTTGAGAAGGCGAATTCTTCTCGTGATTCTGGTATGGAGGGCCAGGCGAACAGAAAGGTATCTTTGCAAAGATATCGTGAAAAGCGGAAAGACAGAAAATTCTCAAAGGCCAAAAAGTGTCCAGGAGTTGCGTCCTCTAGCTTGGAGATGTTTCTGAATTGTCAGCCACGGATGAAAGCTGCATATTCGCAAAACCTAGGCTGCACCGGATCTCCACTGCATAGCCAGTCACCTGAAAGCCAGACAAAAAGTCCCAATCTTTCAGTTGATCTAAACAGTGAAGGCATTTAA

Protein Analysis

313

Amino Acids

34.42

Weight (kDa)

9.26

Isoelectric Point (pI)

60.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
tify PF06200 156 - 184 5.4e-15 tify domain
Jas_motif PF09425 232 - 254 1.8e-07 Jas motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 206
AccB7I CCANNNNNTGG 1 cut(s) 346
AccII CGCG 3 cut(s) 87, 258, 335
AccIII TCCGGA 1 cut(s) 319
AciI CCGC 4 cut(s) 97, 220, 251, 736
AclI AACGTT 1 cut(s) 269
AclWI GGATC 3 cut(s) 148, 220, 868
AcoI YGGCCR 2 cut(s) 304, 409
AcsI RAATTY 3 cut(s) 101, 664, 749
AcuI CTGAAG 2 cut(s) 68, 81
AcyI GRCGYC 1 cut(s) 207
AfiI CCNNNNNNNGG 4 cut(s) 346, 575, 647, 658
AgsI TTSAA 1 cut(s) 606
AhdI GACNNNNNGTC 1 cut(s) 900
AjnI CCWGG 3 cut(s) 190, 693, 772
Alw21I GWGCWC 1 cut(s) 459
Alw26I GTCTC 1 cut(s) 189
AlwI GGATC 3 cut(s) 148, 220, 868
Aor13HI TCCGGA 1 cut(s) 319
AoxI GGCC 6 cut(s) 304, 409, 525, 649, 691, 759
ApeKI GCWGC 3 cut(s) 548, 830, 852
ApoI RAATTY 3 cut(s) 101, 664, 749
Asp700I GAANNNNTTC 2 cut(s) 349, 601
AspA2I CCTAGG 1 cut(s) 847
AspLEI GCGC 2 cut(s) 209, 335
AspS9I GGNCC 2 cut(s) 526, 691
AsuC2I CCSGG 2 cut(s) 308, 529
AsuHPI GGTGA 2 cut(s) 9, 873
AvrII CCTAGG 1 cut(s) 847
BalI TGGCCA 1 cut(s) 411
BanI GGYRCC 1 cut(s) 206
BanII GRGCYC 1 cut(s) 459
BarI GAAGNNNNNNTAC 2 cut(s) 571, 603
BauI CACGAG 1 cut(s) 672
BbsI GAAGAC 2 cut(s) 96, 133
Bbv12I GWGCWC 1 cut(s) 459
BbvI GCAGC 3 cut(s) 560, 817, 839
BccI CCATC 3 cut(s) 401, 500, 625
BceAI ACGGC 1 cut(s) 346
BcgI CGANNNNNNTGC 4 cut(s) 211, 245, 707, 741
BciT130I CCWGG 3 cut(s) 192, 695, 774
BciVI GTATCC 1 cut(s) 406
BcnI CCSGG 2 cut(s) 308, 529
BcoDI GTCTC 1 cut(s) 189
BfaI CTAG 2 cut(s) 789, 848
BfmI CTRYAG 1 cut(s) 481
BfoI RGCGCY 1 cut(s) 210
BfuI GTATCC 1 cut(s) 406
BisI GCNGC 4 cut(s) 97, 549, 831, 853
BlnI CCTAGG 1 cut(s) 847
BlsI GCNGC 4 cut(s) 98, 550, 832, 854
Bme1390I CCNGG 5 cut(s) 192, 308, 529, 695, 774
BmeRI GACNNNNNGTC 1 cut(s) 900
BmgT120I GGNCC 2 cut(s) 526, 691
BmiI GGNNCC 1 cut(s) 208
BmrFI CCNGG 5 cut(s) 192, 308, 529, 695, 774
BpiI GAAGAC 2 cut(s) 96, 133
BpmI CTGGAG 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 674
BpuMI CCSGG 2 cut(s) 308, 529
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 2 cut(s) 818, 847
BsaWI WCCGGW 3 cut(s) 319, 374, 857
BsaXI ACNNNNNCTCC 4 cut(s) 412, 442, 847, 877
Bsc4I CCNNNNNNNGG 4 cut(s) 346, 575, 647, 658
Bse118I RCCGGY 2 cut(s) 19, 209
Bse1I ACTGG 3 cut(s) 242, 591, 877
BseAI TCCGGA 1 cut(s) 319
BseBI CCWGG 3 cut(s) 192, 695, 774
BseDI CCNNGG 2 cut(s) 818, 847
BseGI GGATG 2 cut(s) 10, 828
BseLI CCNNNNNNNGG 4 cut(s) 346, 575, 647, 658
BseMII CTCAG 4 cut(s) 89, 161, 251, 357
BseNI ACTGG 3 cut(s) 242, 591, 877
BseXI GCAGC 3 cut(s) 560, 817, 839
BseYI CCCAGC 1 cut(s) 439
BsgI GTGCAG 1 cut(s) 838
Bsh1236I CGCG 3 cut(s) 87, 258, 335
BshFI GGCC 6 cut(s) 306, 411, 527, 651, 693, 761
BshNI GGYRCC 1 cut(s) 206
BsiHKAI GWGCWC 1 cut(s) 459
BsiSI CCGG 8 cut(s) 20, 204, 210, 307, 320, 375, 529, 858
BslFI GGGAC 1 cut(s) 888
BslI CCNNNNNNNGG 4 cut(s) 346, 575, 647, 658
BsmAI GTCTC 1 cut(s) 189
BsmBI CGTCTC 1 cut(s) 189
BsmFI GGGAC 1 cut(s) 888
BsmI GAATGC 1 cut(s) 126
BsnI GGCC 6 cut(s) 306, 411, 527, 651, 693, 761
Bsp1286I GDGCHC 1 cut(s) 459
Bsp13I TCCGGA 1 cut(s) 319
Bsp143I GATC 5 cut(s) 153, 225, 359, 860, 919
Bsp68I TCGCGA 1 cut(s) 87
BspACI CCGC 4 cut(s) 97, 220, 251, 736
BspANI GGCC 6 cut(s) 306, 411, 527, 651, 693, 761
BspCNI CTCAG 4 cut(s) 88, 160, 250, 358
BspEI TCCGGA 1 cut(s) 319
BspFNI CGCG 3 cut(s) 87, 258, 335
BspLI GGNNCC 1 cut(s) 208
BspPI GGATC 3 cut(s) 148, 220, 868
BspT107I GGYRCC 1 cut(s) 206
BsrFI RCCGGY 2 cut(s) 19, 209
BsrI ACTGG 3 cut(s) 242, 591, 877
BssAI RCCGGY 2 cut(s) 19, 209
BssECI CCNNGG 2 cut(s) 818, 847
BssMI GATC 5 cut(s) 153, 225, 359, 860, 919
BssNI GRCGYC 1 cut(s) 207
BssSI CACGAG 1 cut(s) 672
BssT1I CCWWGG 1 cut(s) 847
Bst2BI CACGAG 1 cut(s) 672
Bst2UI CCWGG 3 cut(s) 192, 695, 774
Bst4CI ACNGT 3 cut(s) 132, 578, 929
Bst6I CTCTTC 1 cut(s) 57
BstACI GRCGYC 1 cut(s) 207
BstC8I GCNNGC 1 cut(s) 337
BstDEI CTNAG 4 cut(s) 75, 147, 237, 366
BstDSI CCRYGG 1 cut(s) 818
BstENI CCTNNNNNAGG 1 cut(s) 656
BstF5I GGATG 2 cut(s) 10, 828
BstFNI CGCG 3 cut(s) 87, 258, 335
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 2 cut(s) 209, 335
BstKTI GATC 5 cut(s) 156, 228, 362, 863, 922
BstMAI GTCTC 1 cut(s) 189
BstMBI GATC 5 cut(s) 153, 225, 359, 860, 919
BstMWI GCNNNNNNNGC 2 cut(s) 93, 463
BstNI CCWGG 3 cut(s) 192, 695, 774
BstSCI CCNGG 5 cut(s) 190, 306, 527, 693, 772
BstSFI CTRYAG 1 cut(s) 481
BstUI CGCG 3 cut(s) 87, 258, 335
BstV1I GCAGC 3 cut(s) 560, 817, 839
BstV2I GAAGAC 2 cut(s) 96, 133
BstX2I RGATCY 2 cut(s) 225, 860
BstYI RGATCY 2 cut(s) 225, 860
BsuI GTATCC 1 cut(s) 406
BsuRI GGCC 6 cut(s) 306, 411, 527, 651, 693, 761
BtgI CCRYGG 1 cut(s) 818
BtsCI GGATG 2 cut(s) 10, 828
BtsI GCAGTG 1 cut(s) 866
BtsIMutI CAGTG 3 cut(s) 57, 866, 934
BtuMI TCGCGA 1 cut(s) 87
Cac8I GCNNGC 1 cut(s) 337
CfoI GCGC 2 cut(s) 209, 335
Cfr10I RCCGGY 2 cut(s) 19, 209
Cfr13I GGNCC 2 cut(s) 526, 691
CseI GACGC 2 cut(s) 247, 771
CviAII CATG 1 cut(s) 538
DdeI CTNAG 4 cut(s) 75, 147, 237, 366
DinI GGCGCC 1 cut(s) 208
DpnI GATC 5 cut(s) 155, 227, 361, 862, 921
DpnII GATC 5 cut(s) 153, 225, 359, 860, 919
DriI GACNNNNNGTC 1 cut(s) 900
EaeI YGGCCR 2 cut(s) 304, 409
Eam1104I CTCTTC 1 cut(s) 57
Eam1105I GACNNNNNGTC 1 cut(s) 900
EarI CTCTTC 1 cut(s) 57
EciI GGCGGA 1 cut(s) 240
Ecl136II GAGCTC 1 cut(s) 457
Eco130I CCWWGG 1 cut(s) 847
Eco147I AGGCCT 1 cut(s) 651
Eco24I GRGCYC 1 cut(s) 459
Eco32I GATATC 1 cut(s) 725
Eco53kI GAGCTC 1 cut(s) 457
Eco57I CTGAAG 2 cut(s) 68, 81
EcoICRI GAGCTC 1 cut(s) 457
EcoNI CCTNNNNNAGG 1 cut(s) 656
EcoRI GAATTC 1 cut(s) 664
EcoRII CCWGG 3 cut(s) 190, 693, 772
EcoRV GATATC 1 cut(s) 725
EcoT14I CCWWGG 1 cut(s) 847
EcoT38I GRGCYC 1 cut(s) 459
EgeI GGCGCC 1 cut(s) 208
EheI GGCGCC 1 cut(s) 208
ErhI CCWWGG 1 cut(s) 847
Esp3I CGTCTC 1 cut(s) 189
FaeI CATG 1 cut(s) 541
FaqI GGGAC 1 cut(s) 888
FatI CATG 1 cut(s) 537
Fnu4HI GCNGC 4 cut(s) 97, 549, 831, 853
FokI GGATG 2 cut(s) 17, 835
FriOI GRGCYC 1 cut(s) 459
Fsp4HI GCNGC 4 cut(s) 97, 549, 831, 853
FspBI CTAG 2 cut(s) 789, 848
GlaI GCGC 2 cut(s) 208, 334
GluI GCNGC 4 cut(s) 97, 549, 831, 853
GsaI CCCAGC 1 cut(s) 443
GsuI CTGGAG 1 cut(s) 213
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 6 cut(s) 306, 411, 527, 651, 693, 761
HapII CCGG 8 cut(s) 20, 204, 210, 307, 320, 375, 529, 858
HgaI GACGC 2 cut(s) 247, 771
HhaI GCGC 2 cut(s) 209, 335
Hin1I GRCGYC 1 cut(s) 207
Hin1II CATG 1 cut(s) 541
Hin6I GCGC 2 cut(s) 207, 333
HinP1I GCGC 2 cut(s) 207, 333
HindIII AAGCTT 1 cut(s) 297
HinfI GANTC 3 cut(s) 200, 350, 677
HpaII CCGG 8 cut(s) 20, 204, 210, 307, 320, 375, 529, 858
HphI GGTGA 2 cut(s) 9, 873
Hpy188I TCNGA 4 cut(s) 11, 48, 400, 807
Hpy188III TCNNGA 4 cut(s) 86, 320, 674, 728
Hpy99I CGWCG 1 cut(s) 136
HpyAV CCTTC 2 cut(s) 652, 926
HpyCH4III ACNGT 3 cut(s) 132, 578, 929
HpyCH4IV ACGT 1 cut(s) 269
HpyCH4V TGCA 6 cut(s) 541, 548, 718, 833, 855, 871
HpyF10VI GCNNNNNNNGC 2 cut(s) 93, 463
HpyF3I CTNAG 4 cut(s) 75, 147, 237, 366
HpySE526I ACGT 1 cut(s) 269
Hsp92I GRCGYC 1 cut(s) 207
Hsp92II CATG 1 cut(s) 541
HspAI GCGC 2 cut(s) 207, 333
KasI GGCGCC 1 cut(s) 206
Kpn2I TCCGGA 1 cut(s) 319
Kzo9I GATC 5 cut(s) 153, 225, 359, 860, 919
Lsp1109I GCAGC 3 cut(s) 560, 817, 839
MaeI CTAG 2 cut(s) 789, 848
MaeII ACGT 1 cut(s) 269
MaeIII GTNAC 3 cut(s) 259, 386, 879
MalI GATC 5 cut(s) 155, 227, 361, 862, 921
MboI GATC 5 cut(s) 153, 225, 359, 860, 919
MboII GAAGA 7 cut(s) 74, 101, 138, 208, 335, 637, 660
MfeI CAATTG 1 cut(s) 558
MflI RGATCY 2 cut(s) 225, 860
MhlI GDGCHC 1 cut(s) 459
MlsI TGGCCA 1 cut(s) 411
MluCI AATT 5 cut(s) 101, 558, 664, 749, 808
MluNI TGGCCA 1 cut(s) 411
Mly113I GGCGCC 1 cut(s) 207
MnlI CCTC 7 cut(s) 54, 58, 116, 239, 264, 682, 796
Mox20I TGGCCA 1 cut(s) 411
MroI TCCGGA 1 cut(s) 319
MroXI GAANNNNTTC 2 cut(s) 349, 601
MscI TGGCCA 1 cut(s) 411
MseI TTAA 2 cut(s) 174, 940
Msp20I TGGCCA 1 cut(s) 411
MspA1I CMGCKG 2 cut(s) 365, 443
MspI CCGG 8 cut(s) 20, 204, 210, 307, 320, 375, 529, 858
MspR9I CCNGG 5 cut(s) 192, 308, 529, 695, 774
MunI CAATTG 1 cut(s) 558
Mva1269I GAATGC 1 cut(s) 126
MvaI CCWGG 3 cut(s) 192, 695, 774
MvnI CGCG 3 cut(s) 87, 258, 335
MwoI GCNNNNNNNGC 2 cut(s) 93, 463
NarI GGCGCC 1 cut(s) 207
NciI CCSGG 2 cut(s) 308, 529
NdeII GATC 5 cut(s) 153, 225, 359, 860, 919
NlaIII CATG 1 cut(s) 541
NlaIV GGNNCC 1 cut(s) 208
NmuCI GTSAC 3 cut(s) 259, 386, 879
NruI TCGCGA 1 cut(s) 87
PceI AGGCCT 1 cut(s) 651
PctI GAATGC 1 cut(s) 126
PdmI GAANNNNTTC 2 cut(s) 349, 601
PfeI GAWTC 3 cut(s) 200, 350, 677
PflMI CCANNNNNTGG 1 cut(s) 346
PfoI TCCNGGA 1 cut(s) 772
PkrI GCNGC 4 cut(s) 98, 550, 832, 854
PluTI GGCGCC 1 cut(s) 210
Psp124BI GAGCTC 1 cut(s) 459
Psp1406I AACGTT 1 cut(s) 269
Psp6I CCWGG 3 cut(s) 190, 693, 772
PspFI CCCAGC 1 cut(s) 439
PspGI CCWGG 3 cut(s) 190, 693, 772
PspN4I GGNNCC 1 cut(s) 208
PspPI GGNCC 2 cut(s) 526, 691
PsuI RGATCY 2 cut(s) 225, 860
PvuII CAGCTG 2 cut(s) 365, 443
RruI TCGCGA 1 cut(s) 87
SacI GAGCTC 1 cut(s) 459
SaqAI TTAA 2 cut(s) 174, 940
SatI GCNGC 4 cut(s) 97, 549, 831, 853
Sau3AI GATC 5 cut(s) 153, 225, 359, 860, 919
Sau96I GGNCC 2 cut(s) 526, 691
ScrFI CCNGG 5 cut(s) 192, 308, 529, 695, 774
SduI GDGCHC 1 cut(s) 459
SfcI CTRYAG 1 cut(s) 481
SfoI GGCGCC 1 cut(s) 208
SgrAI CRCCGGYG 1 cut(s) 19
SmlI CTYRAG 1 cut(s) 653
SmoI CTYRAG 1 cut(s) 653
Sse9I AATT 5 cut(s) 101, 558, 664, 749, 808
SseBI AGGCCT 1 cut(s) 651
SsiI CCGC 4 cut(s) 97, 220, 251, 736
SspDI GGCGCC 1 cut(s) 206
SspMI CTAG 2 cut(s) 789, 848
SstI GAGCTC 1 cut(s) 459
StuI AGGCCT 1 cut(s) 651
StyD4I CCNGG 5 cut(s) 190, 306, 527, 693, 772
StyI CCWWGG 1 cut(s) 847
TaaI ACNGT 3 cut(s) 132, 578, 929
TaiI ACGT 1 cut(s) 272
TasI AATT 5 cut(s) 101, 558, 664, 749, 808
TauI GCSGC 1 cut(s) 99
TfiI GAWTC 3 cut(s) 200, 350, 677
Tru1I TTAA 2 cut(s) 174, 940
Tru9I TTAA 2 cut(s) 174, 940
TscAI CASTG 3 cut(s) 64, 873, 934
TseFI GTSAC 3 cut(s) 259, 386, 879
TseI GCWGC 3 cut(s) 548, 830, 852
Tsp45I GTSAC 3 cut(s) 259, 386, 879
TspDTI ATGAA 1 cut(s) 839
TspGWI ACGGA 1 cut(s) 835
TspRI CASTG 3 cut(s) 64, 873, 934
Van91I CCANNNNNTGG 1 cut(s) 346
XagI CCTNNNNNAGG 1 cut(s) 656
XapI RAATTY 3 cut(s) 101, 664, 749
XmaJI CCTAGG 1 cut(s) 847
XmnI GAANNNNTTC 2 cut(s) 349, 601
XspI CTAG 2 cut(s) 789, 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.