pycom13g17310

Protein TIFY 4B-like isoform X1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Forward (+)
13095402 .. 13099478
4077 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g17310.3

Sequence Viewer

Length: 1056 bp
ATGAACGCCCCCACGACGACGTTTCGCTCCATTCTCGAGAAGCCCCTCAATCAGCTCACCGAGGATGACATTTCCCAGCTCACCCGCGAAGACTGCCGCAAATACCTCAAAGAAAAAGGAATGCGGCGGCCCTCCTGGAACAAATCGCAGGCGATCCAGCAGGTTATTTCGCTCAAGGCGCTGCTGGAGCCCAACGACGATTCCGGCGCCGGAGCTCTCAGAAAGATTGTCGTTTTGCCTCAGACGACCACCGCCACCACCCAGCGCGTCAGTACTTTCGCGGCTTCGAGTTCCGCTGATTCAGCTAAGGAAGCGAGCCCTGATGTCCAGGCTTCGGTGTCCGCTGACGAATTGGCGCCGCATCCGAGAAATGAACCGTCCAAACCAGCTCCCGAGGACCCGCCGGTCTATGCGGATACCGCGGCCATCAGTCCCAGAAATCATTGTACAACTGATGCATCAGTTAGGAAAATGACAATTTTCTACAGCGGCAAGGTGAATGTATATGATGGAGTGCCACCTGATAAGGCACGGGCAATCCTGCACCTTGCAGCAGGGCCCAACCATTTGCTTTTGGACAATCAATTTGGTGGTGCTGCAGCAGCAAGATCCTTACATTGCCAATTTCAGACTGCAGGCGATAAAGATGTCCTTTCCCTTCCTAGTGCAACAATTTCTCAGGCAATGCAAACAGTTTCAGGTAACTTTACAGAGAAGATCAGTGAATATACACAGCAGTACTGGGAGAAAGGGAACAACACTCGTGATCCTGATGCAGAGGGTCAGGCGAACAGAAAAGTCTCGTTGCAGAGATACCGTGAAAAGCGAAAAGACAGGGAAAAATTAAAGATTAAGAAAAATATTGGATCGAATACTAGCTTGGAGGTTTACTTGAATCGTCAACTCAGGACGCATACCTCAAATGGTAATTCAAGTCAGTATGGCACAAGCTCTCCACCCCAACCTGGGCTGCTACAGACAGCTGAAAATCAGCCAAAGTTCCGCTGTCTTCCTGTTGACCTAAACGAGAAGGATATCCTGGAACACCGGACTTGA

Protein Analysis

352

Amino Acids

38.71

Weight (kDa)

9.0

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 404
Acc36I ACCTGC 1 cut(s) 151
AccB1I GGYRCC 2 cut(s) 206, 355
AccII CGCG 4 cut(s) 87, 267, 281, 422
AclWI GGATC 4 cut(s) 148, 603, 761, 874
AcoI YGGCCR 1 cut(s) 423
AcyI GRCGYC 2 cut(s) 207, 356
AfaI GTAC 3 cut(s) 274, 448, 740
AfiI CCNNNNNNNGG 3 cut(s) 334, 965, 966
AgsI TTSAA 2 cut(s) 895, 933
AjnI CCWGG 4 cut(s) 134, 327, 964, 1038
AjuI GAANNNNNNNTTGG 2 cut(s) 863, 895
AluBI AGCT 8 cut(s) 55, 79, 215, 305, 389, 879, 951, 983
AluI AGCT 8 cut(s) 55, 79, 215, 305, 389, 879, 951, 983
Alw21I GWGCWC 1 cut(s) 217
Alw26I GTCTC 1 cut(s) 805
AlwI GGATC 4 cut(s) 148, 603, 761, 874
Ama87I CYCGRG 2 cut(s) 35, 392
AoxI GGCC 3 cut(s) 128, 423, 557
ApaI GGGCCC 1 cut(s) 561
ApeKI GCWGC 6 cut(s) 181, 551, 596, 599, 602, 970
ArsI GACNNNNNNTTYG 2 cut(s) 569, 601
AspLEI GCGC 4 cut(s) 181, 209, 267, 358
AspS9I GGNCC 4 cut(s) 129, 397, 557, 558
AsuHPI GGTGA 3 cut(s) 49, 73, 508
AvaI CYCGRG 2 cut(s) 35, 392
AvaII GGWCC 1 cut(s) 397
BaeGI GKGCMC 1 cut(s) 561
BanI GGYRCC 2 cut(s) 206, 355
BanII GRGCYC 4 cut(s) 192, 217, 320, 561
BauI CACGAG 1 cut(s) 762
BbsI GAAGAC 2 cut(s) 96, 1001
Bbv12I GWGCWC 1 cut(s) 217
BbvI GCAGC 6 cut(s) 168, 563, 583, 611, 614, 957
BccI CCATC 2 cut(s) 434, 503
BciT130I CCWGG 4 cut(s) 136, 329, 966, 1040
BciVI GTATCC 1 cut(s) 409
BcoDI GTCTC 1 cut(s) 805
BfaI CTAG 2 cut(s) 663, 876
BfmI CTRYAG 4 cut(s) 484, 597, 633, 974
BfoI RGCGCY 3 cut(s) 182, 210, 359
BfuAI ACCTGC 1 cut(s) 151
BfuI GTATCC 1 cut(s) 409
BmcAI AGTACT 2 cut(s) 274, 740
Bme1390I CCNGG 4 cut(s) 136, 329, 966, 1040
Bme18I GGWCC 1 cut(s) 397
BmeT110I CYCGRG 2 cut(s) 35, 392
BmgT120I GGNCC 4 cut(s) 129, 397, 557, 558
BmiI GGNNCC 5 cut(s) 189, 208, 357, 399, 559
BmrFI CCNGG 4 cut(s) 136, 329, 966, 1040
BmrI ACTGGG 1 cut(s) 751
BmsI GCATC 4 cut(s) 370, 445, 467, 763
BmuI ACTGGG 1 cut(s) 751
BpiI GAAGAC 2 cut(s) 96, 1001
BpmI CTGGAG 1 cut(s) 206
Bpu10I CCTNAGC 1 cut(s) 306
BpuEI CTTGAG 1 cut(s) 158
BsaHI GRCGYC 2 cut(s) 207, 356
BsaJI CCNNGG 4 cut(s) 60, 393, 420, 965
BsaWI WCCGGW 1 cut(s) 1047
BsaXI ACNNNNNCTCC 2 cut(s) 937, 967
Bsc4I CCNNNNNNNGG 3 cut(s) 334, 965, 966
Bse118I RCCGGY 1 cut(s) 403
Bse1I ACTGG 1 cut(s) 746
Bse3DI GCAATG 2 cut(s) 616, 690
BseBI CCWGG 4 cut(s) 136, 329, 966, 1040
BseDI CCNNGG 4 cut(s) 60, 393, 420, 965
BseGI GGATG 2 cut(s) 70, 361
BseLI CCNNNNNNNGG 3 cut(s) 334, 965, 966
BseMI GCAATG 2 cut(s) 616, 690
BseMII CTCAG 4 cut(s) 232, 254, 692, 919
BseNI ACTGG 1 cut(s) 746
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 6 cut(s) 168, 563, 583, 611, 614, 957
BseYI CCCAGC 2 cut(s) 75, 261
BsgI GTGCAG 1 cut(s) 527
Bsh1236I CGCG 4 cut(s) 87, 267, 281, 422
BshFI GGCC 3 cut(s) 130, 425, 559
BshNI GGYRCC 2 cut(s) 206, 355
BsiHKAI GWGCWC 1 cut(s) 217
BsiHKCI CYCGRG 2 cut(s) 35, 392
BsiSI CCGG 4 cut(s) 204, 210, 404, 1048
BslFI GGGAC 1 cut(s) 417
BslI CCNNNNNNNGG 3 cut(s) 334, 965, 966
BsmAI GTCTC 1 cut(s) 805
BsmFI GGGAC 1 cut(s) 417
BsmI GAATGC 1 cut(s) 126
BsnI GGCC 3 cut(s) 130, 425, 559
BsoBI CYCGRG 2 cut(s) 35, 392
Bsp120I GGGCCC 1 cut(s) 557
Bsp1286I GDGCHC 4 cut(s) 192, 217, 320, 561
Bsp1407I TGTACA 1 cut(s) 446
Bsp143I GATC 5 cut(s) 153, 608, 717, 766, 866
BspANI GGCC 3 cut(s) 130, 425, 559
BspCNI CTCAG 4 cut(s) 231, 253, 691, 918
BspFNI CGCG 4 cut(s) 87, 267, 281, 422
BspLI GGNNCC 5 cut(s) 189, 208, 357, 399, 559
BspMAI CTGCAG 2 cut(s) 601, 637
BspMI ACCTGC 1 cut(s) 151
BspPI GGATC 4 cut(s) 148, 603, 761, 874
BspT107I GGYRCC 2 cut(s) 206, 355
BsrDI GCAATG 2 cut(s) 616, 690
BsrFI RCCGGY 1 cut(s) 403
BsrGI TGTACA 1 cut(s) 446
BsrI ACTGG 1 cut(s) 746
BssAI RCCGGY 1 cut(s) 403
BssECI CCNNGG 4 cut(s) 60, 393, 420, 965
BssMI GATC 5 cut(s) 153, 608, 717, 766, 866
BssNI GRCGYC 2 cut(s) 207, 356
BssSI CACGAG 1 cut(s) 762
Bst2BI CACGAG 1 cut(s) 762
Bst2UI CCWGG 4 cut(s) 136, 329, 966, 1040
Bst4CI ACNGT 3 cut(s) 378, 694, 818
BstACI GRCGYC 2 cut(s) 207, 356
BstAUI TGTACA 1 cut(s) 446
BstC8I GCNNGC 3 cut(s) 150, 316, 637
BstDEI CTNAG 5 cut(s) 218, 240, 306, 678, 905
BstDSI CCRYGG 1 cut(s) 420
BstF5I GGATG 2 cut(s) 70, 361
BstFNI CGCG 4 cut(s) 87, 267, 281, 422
BstH2I RGCGCY 3 cut(s) 182, 210, 359
BstHHI GCGC 4 cut(s) 181, 209, 267, 358
BstKTI GATC 5 cut(s) 156, 611, 720, 769, 869
BstMAI GTCTC 1 cut(s) 805
BstMBI GATC 5 cut(s) 153, 608, 717, 766, 866
BstMWI GCNNNNNNNGC 7 cut(s) 93, 178, 187, 302, 311, 419, 602
BstNI CCWGG 4 cut(s) 136, 329, 966, 1040
BstSCI CCNGG 4 cut(s) 134, 327, 964, 1038
BstSFI CTRYAG 4 cut(s) 484, 597, 633, 974
BstSLI GKGCMC 1 cut(s) 561
BstUI CGCG 4 cut(s) 87, 267, 281, 422
BstV1I GCAGC 6 cut(s) 168, 563, 583, 611, 614, 957
BstV2I GAAGAC 2 cut(s) 96, 1001
BstX2I RGATCY 1 cut(s) 608
BstYI RGATCY 1 cut(s) 608
BsuI GTATCC 1 cut(s) 409
BsuRI GGCC 3 cut(s) 130, 425, 559
BtgI CCRYGG 1 cut(s) 420
BtsCI GGATG 2 cut(s) 70, 361
BtsIMutI CAGTG 1 cut(s) 727
BveI ACCTGC 1 cut(s) 151
Cac8I GCNNGC 3 cut(s) 150, 316, 637
CfoI GCGC 4 cut(s) 181, 209, 267, 358
Cfr10I RCCGGY 1 cut(s) 403
Cfr13I GGNCC 4 cut(s) 129, 397, 557, 558
Cfr42I CCGCGG 1 cut(s) 423
CseI GACGC 2 cut(s) 256, 919
Csp6I GTAC 3 cut(s) 273, 447, 739
CviQI GTAC 3 cut(s) 273, 447, 739
DdeI CTNAG 5 cut(s) 218, 240, 306, 678, 905
DinI GGCGCC 2 cut(s) 208, 357
DpnI GATC 5 cut(s) 155, 610, 719, 768, 868
DpnII GATC 5 cut(s) 153, 608, 717, 766, 866
DrdI GACNNNNNNGTC 1 cut(s) 404
DseDI GACNNNNNNGTC 1 cut(s) 404
EaeI YGGCCR 1 cut(s) 423
Ecl136II GAGCTC 1 cut(s) 215
Eco24I GRGCYC 4 cut(s) 192, 217, 320, 561
Eco32I GATATC 1 cut(s) 1036
Eco47I GGWCC 1 cut(s) 397
Eco53kI GAGCTC 1 cut(s) 215
Eco88I CYCGRG 2 cut(s) 35, 392
EcoICRI GAGCTC 1 cut(s) 215
EcoO109I RGGNCCY 2 cut(s) 397, 557
EcoRII CCWGG 4 cut(s) 134, 327, 964, 1038
EcoRV GATATC 1 cut(s) 1036
EcoT22I ATGCAT 1 cut(s) 460
EcoT38I GRGCYC 4 cut(s) 192, 217, 320, 561
EgeI GGCGCC 2 cut(s) 208, 357
EheI GGCGCC 2 cut(s) 208, 357
FaiI YATR 6 cut(s) 411, 505, 507, 729, 915, 942
FalI AAGNNNNNCTT 2 cut(s) 636, 668
FaqI GGGAC 1 cut(s) 417
FauI CCCGC 2 cut(s) 92, 408
FokI GGATG 2 cut(s) 77, 348
FriOI GRGCYC 4 cut(s) 192, 217, 320, 561
FspBI CTAG 2 cut(s) 663, 876
GlaI GCGC 4 cut(s) 180, 208, 266, 357
GsaI CCCAGC 2 cut(s) 79, 265
GsuI CTGGAG 1 cut(s) 206
HaeII RGCGCY 3 cut(s) 182, 210, 359
HaeIII GGCC 3 cut(s) 130, 425, 559
HapII CCGG 4 cut(s) 204, 210, 404, 1048
HgaI GACGC 2 cut(s) 256, 919
HhaI GCGC 4 cut(s) 181, 209, 267, 358
Hin1I GRCGYC 2 cut(s) 207, 356
Hin6I GCGC 4 cut(s) 179, 207, 265, 356
HinP1I GCGC 4 cut(s) 179, 207, 265, 356
HincII GTYRAC 2 cut(s) 902, 1018
HindII GTYRAC 2 cut(s) 902, 1018
HinfI GANTC 3 cut(s) 200, 299, 895
HpaII CCGG 4 cut(s) 204, 210, 404, 1048
HphI GGTGA 3 cut(s) 49, 73, 508
Hpy166II GTNNAC 3 cut(s) 889, 902, 1018
Hpy188I TCNGA 4 cut(s) 221, 243, 366, 630
Hpy188III TCNNGA 6 cut(s) 35, 37, 392, 764, 770, 907
Hpy8I GTNNAC 3 cut(s) 889, 902, 1018
Hpy99I CGWCG 3 cut(s) 19, 22, 200
HpyAV CCTTC 2 cut(s) 668, 1024
HpyCH4III ACNGT 3 cut(s) 378, 694, 818
HpyCH4IV ACGT 1 cut(s) 20
HpyCH4V TGCA 9 cut(s) 458, 544, 551, 599, 635, 668, 688, 776, 808
HpyF10VI GCNNNNNNNGC 7 cut(s) 93, 178, 187, 302, 311, 419, 602
HpyF3I CTNAG 5 cut(s) 218, 240, 306, 678, 905
HpySE526I ACGT 1 cut(s) 20
Hsp92I GRCGYC 2 cut(s) 207, 356
HspAI GCGC 4 cut(s) 179, 207, 265, 356
KasI GGCGCC 2 cut(s) 206, 355
KspI CCGCGG 1 cut(s) 423
Kzo9I GATC 5 cut(s) 153, 608, 717, 766, 866
LmnI GCTCC 4 cut(s) 32, 187, 212, 394
Lsp1109I GCAGC 6 cut(s) 168, 563, 583, 611, 614, 957
LweI GCATC 4 cut(s) 370, 445, 467, 763
MaeI CTAG 2 cut(s) 663, 876
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 1 cut(s) 701
MalI GATC 5 cut(s) 155, 610, 719, 768, 868
MboI GATC 5 cut(s) 153, 608, 717, 766, 866
MboII GAAGA 3 cut(s) 101, 727, 1001
MflI RGATCY 1 cut(s) 608
MhlI GDGCHC 4 cut(s) 192, 217, 320, 561
MluCI AATT 7 cut(s) 350, 477, 584, 623, 672, 842, 928
Mly113I GGCGCC 2 cut(s) 207, 356
MnlI CCTC 9 cut(s) 55, 56, 116, 142, 249, 388, 772, 877, 928
Mph1103I ATGCAT 1 cut(s) 460
MseI TTAA 2 cut(s) 845, 852
MspA1I CMGCKG 6 cut(s) 296, 344, 422, 489, 983, 1005
MspI CCGG 4 cut(s) 204, 210, 404, 1048
MspR9I CCNGG 4 cut(s) 136, 329, 966, 1040
Mva1269I GAATGC 1 cut(s) 126
MvaI CCWGG 4 cut(s) 136, 329, 966, 1040
MvnI CGCG 4 cut(s) 87, 267, 281, 422
MwoI GCNNNNNNNGC 7 cut(s) 93, 178, 187, 302, 311, 419, 602
NarI GGCGCC 2 cut(s) 207, 356
NdeII GATC 5 cut(s) 153, 608, 717, 766, 866
NlaIV GGNNCC 5 cut(s) 189, 208, 357, 399, 559
NsiI ATGCAT 1 cut(s) 460
PaeR7I CTCGAG 1 cut(s) 35
PctI GAATGC 1 cut(s) 126
PfeI GAWTC 3 cut(s) 200, 299, 895
PfoI TCCNGGA 2 cut(s) 134, 1038
PluTI GGCGCC 2 cut(s) 210, 359
PpuMI RGGWCCY 1 cut(s) 397
Psp124BI GAGCTC 1 cut(s) 217
Psp5II RGGWCCY 1 cut(s) 397
Psp6I CCWGG 4 cut(s) 134, 327, 964, 1038
PspFI CCCAGC 2 cut(s) 75, 261
PspGI CCWGG 4 cut(s) 134, 327, 964, 1038
PspN4I GGNNCC 5 cut(s) 189, 208, 357, 399, 559
PspOMI GGGCCC 1 cut(s) 557
PspPI GGNCC 4 cut(s) 129, 397, 557, 558
PspPPI RGGWCCY 1 cut(s) 397
PstI CTGCAG 2 cut(s) 601, 637
PsuI RGATCY 1 cut(s) 608
PvuII CAGCTG 1 cut(s) 983
RsaI GTAC 3 cut(s) 274, 448, 740
RsaNI GTAC 3 cut(s) 273, 447, 739
SacI GAGCTC 1 cut(s) 217
SacII CCGCGG 1 cut(s) 423
SaqAI TTAA 2 cut(s) 845, 852
Sau3AI GATC 5 cut(s) 153, 608, 717, 766, 866
Sau96I GGNCC 4 cut(s) 129, 397, 557, 558
ScaI AGTACT 2 cut(s) 274, 740
ScrFI CCNGG 4 cut(s) 136, 329, 966, 1040
SduI GDGCHC 4 cut(s) 192, 217, 320, 561
SfaNI GCATC 4 cut(s) 370, 445, 467, 763
SfcI CTRYAG 4 cut(s) 484, 597, 633, 974
SfoI GGCGCC 2 cut(s) 208, 357
Sfr274I CTCGAG 1 cut(s) 35
Sfr303I CCGCGG 1 cut(s) 423
SgrBI CCGCGG 1 cut(s) 423
SinI GGWCC 1 cut(s) 397
SlaI CTCGAG 1 cut(s) 35
SmlI CTYRAG 2 cut(s) 35, 173
SmoI CTYRAG 2 cut(s) 35, 173
Sse9I AATT 7 cut(s) 350, 477, 584, 623, 672, 842, 928
SspDI GGCGCC 2 cut(s) 206, 355
SspI AATATT 1 cut(s) 862
SspMI CTAG 2 cut(s) 663, 876
SstI GAGCTC 1 cut(s) 217
StyD4I CCNGG 4 cut(s) 134, 327, 964, 1038
TaaI ACNGT 3 cut(s) 378, 694, 818
TaiI ACGT 1 cut(s) 23
TaqI TCGA 3 cut(s) 36, 287, 869
TasI AATT 7 cut(s) 350, 477, 584, 623, 672, 842, 928
TatI WGTACW 3 cut(s) 272, 446, 738
TauI GCSGC 7 cut(s) 99, 127, 130, 284, 361, 425, 492
TfiI GAWTC 3 cut(s) 200, 299, 895
Tru1I TTAA 2 cut(s) 845, 852
Tru9I TTAA 2 cut(s) 845, 852
TscAI CASTG 1 cut(s) 727
TseI GCWGC 6 cut(s) 181, 551, 596, 599, 602, 970
TspDTI ATGAA 2 cut(s) 17, 387
TspRI CASTG 1 cut(s) 727
VpaK11BI GGWCC 1 cut(s) 397
XhoI CTCGAG 1 cut(s) 35
XspI CTAG 2 cut(s) 663, 876
ZrmI AGTACT 2 cut(s) 274, 740
Zsp2I ATGCAT 1 cut(s) 460
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.