Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003795

Physical Location & Seq

Genomic Coordinates Reverse (-)

33467412 .. 33468944

Gene Structure 1533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0312600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGTGCACAGTTATAAAGAGGATTCGTCCAAGTTTAGCTTATCTAGAACAAATTAGGCAACACATGGCAAGGCAACCTTCAATTGACCCAAACACCAGGACAATATTGATTTGCGGCTATCCCAATGTTGGAAAGAGTTCATTCATCAACAAGATCACCAGGGCCGATGTTGATGTCCAGCCTTATGCTTTGACTACAAAGTCACTCTTTGTGGGGCATACAGATTATAAGTACCTGAGGTACCAGGTTATTGATACACCTGGGATTTTGGACCGACCATTTGAAGACTGGTCTTGTGGTTATACCATTGCCCAACAAGCAGCCCTATTTCATAGCATTAAGTCTGTGTTCATGAACAAACCATTAATTATAGTCTGCAACAAGACTGATTTGCAGCCATTGGAGGGCATATCTGAGGAAGACATGAAGTTGGTCACAGAGATGAAAGCTGAAGCTGTGAAGAGTCTGAAGACTGTGCTTGGTCAAGGAGGCGAGGCTACAAATGATGATGGGGTACTACTCTTCTCCATGAGCACTTTGACCGAGGAGGAGGTTATTTCCGTAAAGAATGCAGCTTGTGAGAGGTTATTGAATCAGAGAGTTGAGTTGAAGATGAAATCTAAAAAGATAAATGATCGTTTAAATCGTTTTCATGTTGCAATCCCAAAGCCAGGTGACCAAAAGGAAAGGCCTCCATGTATACCTCAGGCTGTCTTAGAAGCTAAGGCTAAGCAAGCAGCAGAGAAGGAAAAGAGAACTACTGAAAAGGATTTGGAGAATGAAAATGGTGGTGCTGGTGTATACTCTGCCCGTTTGAAGAAGAATTATATCCTTGCTCATGATGAGTGGAAAGAGGACATCATGCCTGAAATTCTTGATAAGCACAATGTATTTGATTTTGTTGATCCCGATATTTTGAATAGGCTTGAGGAGTTGGAACGAGAAGAAGGAATCAGGCGGGCGGAGGTGGATGATGATGTGGAGATGGGAGGAATGGAGTTGACTCCAGAAGAGCAGAAGACATTGGCTCAGATAAGGAAAAAGAAAAGCTTGCTGATTCAACAACATAGAATTAAGAAAAGTACCGCGGAGAGTCGACCTACAGTACCTAGGAAATTTGACAAGGACAGGGAGTTCACAACAAAGAGAATGGAGAGGCAGCTGTCAGAGTTGGGAATTGATCCTAGTGGTGGTGTCATGGATATGGATGTGGATACACCCAACAAGAAGCTGCGCTTGATGTCTAGACCCCCTTCAAGATCAAGATCAAGGCCGCCTACTGATGTTGTCCCTGGTGATGGCTTCAAGGACTCTGATCAAAAGTCTAAAGCACTGGACAAGGCCCGGAAATCTGTGAAGAACAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003714 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0007275 GO:0008150 GO:0009611 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0010556 GO:0010558 GO:0010605 GO:0010646 GO:0019219 GO:0019222 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0032501 GO:0032502 GO:0042127 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045934 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048583 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0099402 GO:0140110 GO:1902679 GO:1903506 GO:1903507 GO:2000022 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT_2 tify

Protein Analysis

455

Amino Acids

51.74

Weight (kDa)

8.75

Isoelectric Point (pI)

42.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FeoB_N	PF02421	34 - 90	7.4e-08	Ferrous iron transport protein B
MMR_HSR1	PF01926	35 - 103	1.2e-14	50S ribosome-binding GTPase
NOG1	PF06858	98 - 130	6.1e-10	Nucleolar GTP-binding protein 1 (NOG1)
NOGCT	PF08155	252 - 305	3.5e-24	NOGCT (NUC087) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14713 AT4G14713 AT4G14713 AT4G14713 AT4G14713 AT4G14720 AT4G14720
fragaria_vesca	FvH4_4g01120 FvH4_4g01120
malus_domestica	MD13G1199500.v1.1 MD16G1199200.v1.1
prunus_persica	Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1
pyrus_communis	pycom13g17310 pycom16g16780
rosa_chinensis	RchiOBHm_Chr4g0387691
rosa_laevigata	RLG00000010101
rosa_multiflora	Rmu_sc0006621.1_g000001 Rmu_sc0015409.1_g000001 Rmu_sc0028325.1_g000001
rosa_roxburghii	Rroxscaffold_5G00334340
rosa_rugosa	Rorug03G0312500 Rorug03G0312600 Rorug03G0312700
rosa_samantha	Rh4AG017700 Rh4BG012600 Rh4CG018900 Rh4DG013500
rosa_wichuraiana	Rw4G001150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	14, 228
AasI	GACNNNNNNGTC	1 cut(s)	199
Acc65I	GGTACC	1 cut(s)	240
AccB1I	GGYRCC	1 cut(s)	240
AccI	GTMKAC	3 cut(s)	700, 801, 1096
AccII	CGCG	1 cut(s)	1088
AciI	CCGC	6 cut(s)	114, 958, 962, 1086, 1088, 1274
AclWI	GGATC	2 cut(s)	899, 1175
AcsI	RAATTY	2 cut(s)	870, 1115
AcuI	CTGAAG	2 cut(s)	471, 488
AfaI	GTAC	5 cut(s)	233, 242, 516, 1084, 1107
AfiI	CCNNNNNNNGG	5 cut(s)	128, 404, 671, 1190, 1298
AgsI	TTSAA	9 cut(s)	81, 284, 592, 610, 817, 919, 1061, 1257, 1306
AjnI	CCWGG	6 cut(s)	95, 158, 243, 259, 670, 1291
AloI	GAACNNNNNNTCC	2 cut(s)	1118, 1150
AluBI	AGCT	8 cut(s)	38, 449, 455, 575, 722, 1050, 1162, 1231
AluI	AGCT	8 cut(s)	38, 449, 455, 575, 722, 1050, 1162, 1231
Alw21I	GWGCWC	2 cut(s)	8, 536
Alw44I	GTGCAC	1 cut(s)	4
AlwI	GGATC	2 cut(s)	899, 1175
AoxI	GGCC	4 cut(s)	162, 689, 1271, 1341
ApaLI	GTGCAC	1 cut(s)	4
ApeKI	GCWGC	6 cut(s)	320, 394, 572, 737, 1159, 1231
ApoI	RAATTY	2 cut(s)	870, 1115
ArsI	GACNNNNNNTTYG	2 cut(s)	263, 295
AseI	ATTAAT	1 cut(s)	365
Asp700I	GAANNNNTTC	1 cut(s)	136
Asp718I	GGTACC	1 cut(s)	240
AspA2I	CCTAGG	1 cut(s)	1109
AspLEI	GCGC	1 cut(s)	1236
AspS9I	GGNCC	3 cut(s)	162, 271, 1342
AsuC2I	CCSGG	1 cut(s)	1345
AsuHPI	GGTGA	3 cut(s)	148, 686, 1307
AvaII	GGWCC	1 cut(s)	271
AvrII	CCTAGG	1 cut(s)	1109
AxyI	CCTNAGG	2 cut(s)	236, 705
BaeGI	GKGCMC	1 cut(s)	8
BanI	GGYRCC	1 cut(s)	240
BbsI	GAAGAC	4 cut(s)	291, 426, 476, 1025
Bbv12I	GWGCWC	2 cut(s)	8, 536
BbvI	GCAGC	6 cut(s)	332, 406, 584, 749, 1171, 1218
BccI	CCATC	3 cut(s)	503, 979, 1292
BciT130I	CCWGG	6 cut(s)	97, 160, 245, 261, 672, 1293
BciVI	GTATCC	1 cut(s)	1207
BclI	TGATCA	1 cut(s)	1315
BcnI	CCSGG	1 cut(s)	1345
BfaI	CTAG	4 cut(s)	44, 1110, 1185, 1245
BfmI	CTRYAG	1 cut(s)	1101
BfuI	GTATCC	1 cut(s)	1207
BisI	GCNGC	8 cut(s)	115, 321, 395, 573, 738, 1160, 1232, 1274
BlnI	CCTAGG	1 cut(s)	1109
BlpI	GCTNAGC	1 cut(s)	729
BlsI	GCNGC	8 cut(s)	116, 322, 396, 574, 739, 1161, 1233, 1275
Bme1390I	CCNGG	7 cut(s)	97, 160, 245, 261, 672, 1293, 1345
Bme18I	GGWCC	1 cut(s)	271
BmgT120I	GGNCC	3 cut(s)	162, 271, 1342
BmiI	GGNNCC	1 cut(s)	242
BmrFI	CCNGG	7 cut(s)	97, 160, 245, 261, 672, 1293, 1345
BpiI	GAAGAC	4 cut(s)	291, 426, 476, 1025
BpmI	CTGGAG	1 cut(s)	990
Bpu10I	CCTNAGC	1 cut(s)	723
Bpu1102I	GCTNAGC	1 cut(s)	729
BpuEI	CTTGAG	1 cut(s)	947
BpuMI	CCSGG	1 cut(s)	1345
BsaBI	GATNNNNATC	1 cut(s)	1264
BsaJI	CCNNGG	6 cut(s)	159, 260, 543, 1086, 1109, 1291
Bsc4I	CCNNNNNNNGG	5 cut(s)	128, 404, 671, 1190, 1298
Bse1I	ACTGG	2 cut(s)	293, 1338
Bse21I	CCTNAGG	2 cut(s)	236, 705
Bse3DI	GCAATG	1 cut(s)	306
Bse8I	GATNNNNATC	1 cut(s)	1264
BseBI	CCWGG	6 cut(s)	97, 160, 245, 261, 672, 1293
BseDI	CCNNGG	6 cut(s)	159, 260, 543, 1086, 1109, 1291
BseGI	GGATG	2 cut(s)	976, 1213
BseJI	GATNNNNATC	1 cut(s)	1264
BseLI	CCNNNNNNNGG	5 cut(s)	128, 404, 671, 1190, 1298
BseMI	GCAATG	1 cut(s)	306
BseMII	CTCAG	4 cut(s)	227, 405, 719, 1043
BseNI	ACTGG	2 cut(s)	293, 1338
BseRI	GAGGAG	3 cut(s)	560, 563, 944
BseSI	GKGCMC	1 cut(s)	8
BseXI	GCAGC	6 cut(s)	332, 406, 584, 749, 1171, 1218
Bsh1236I	CGCG	1 cut(s)	1088
BshFI	GGCC	4 cut(s)	164, 691, 1273, 1343
BshNI	GGYRCC	1 cut(s)	240
BsiHKAI	GWGCWC	2 cut(s)	8, 536
BsiSI	CCGG	1 cut(s)	1345
BslFI	GGGAC	1 cut(s)	1274
BslI	CCNNNNNNNGG	5 cut(s)	128, 404, 671, 1190, 1298
BsmFI	GGGAC	1 cut(s)	1274
BsmI	GAATGC	1 cut(s)	574
BsnI	GGCC	4 cut(s)	164, 691, 1273, 1343
Bsp1286I	GDGCHC	2 cut(s)	8, 536
Bsp143I	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
Bsp1720I	GCTNAGC	1 cut(s)	729
BspACI	CCGC	6 cut(s)	114, 958, 962, 1086, 1088, 1274
BspANI	GGCC	4 cut(s)	164, 691, 1273, 1343
BspCNI	CTCAG	4 cut(s)	228, 406, 718, 1042
BspFNI	CGCG	1 cut(s)	1088
BspHI	TCATGA	2 cut(s)	351, 838
BspLI	GGNNCC	1 cut(s)	242
BspPI	GGATC	2 cut(s)	899, 1175
BspQI	GCTCTTC	1 cut(s)	1005
BspT107I	GGYRCC	1 cut(s)	240
BsrDI	GCAATG	1 cut(s)	306
BsrI	ACTGG	2 cut(s)	293, 1338
BssECI	CCNNGG	6 cut(s)	159, 260, 543, 1086, 1109, 1291
BssMI	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
BssNAI	GTATAC	2 cut(s)	701, 802
BssT1I	CCWWGG	1 cut(s)	1109
Bst1107I	GTATAC	2 cut(s)	701, 802
Bst2UI	CCWGG	6 cut(s)	97, 160, 245, 261, 672, 1293
Bst4CI	ACNGT	3 cut(s)	10, 475, 1105
Bst6I	CTCTTC	3 cut(s)	455, 527, 1005
BstC8I	GCNNGC	3 cut(s)	735, 960, 1052
BstDEI	CTNAG	7 cut(s)	236, 414, 705, 715, 723, 729, 1029
BstDSI	CCRYGG	1 cut(s)	1086
BstEII	GGTNACC	1 cut(s)	674
BstF5I	GGATG	2 cut(s)	976, 1213
BstFNI	CGCG	1 cut(s)	1088
BstHHI	GCGC	1 cut(s)	1236
BstKTI	GATC	7 cut(s)	156, 637, 907, 1183, 1262, 1268, 1318
BstMBI	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
BstMWI	GCNNNNNNNGC	2 cut(s)	317, 734
BstNI	CCWGG	6 cut(s)	97, 160, 245, 261, 672, 1293
BstPI	GGTNACC	1 cut(s)	674
BstSCI	CCNGG	7 cut(s)	95, 158, 243, 259, 670, 1291, 1343
BstSFI	CTRYAG	1 cut(s)	1101
BstSLI	GKGCMC	1 cut(s)	8
BstUI	CGCG	1 cut(s)	1088
BstV1I	GCAGC	6 cut(s)	332, 406, 584, 749, 1171, 1218
BstV2I	GAAGAC	4 cut(s)	291, 426, 476, 1025
BstZ17I	GTATAC	2 cut(s)	701, 802
Bsu36I	CCTNAGG	2 cut(s)	236, 705
BsuI	GTATCC	1 cut(s)	1207
BsuRI	GGCC	4 cut(s)	164, 691, 1273, 1343
BtgI	CCRYGG	1 cut(s)	1086
BtsCI	GGATG	2 cut(s)	976, 1213
BtsIMutI	CAGTG	1 cut(s)	1331
Cac8I	GCNNGC	3 cut(s)	735, 960, 1052
CciI	TCATGA	2 cut(s)	351, 838
CfoI	GCGC	1 cut(s)	1236
Cfr13I	GGNCC	3 cut(s)	162, 271, 1342
Cfr42I	CCGCGG	1 cut(s)	1089
CsiI	ACCWGGT	1 cut(s)	243
Csp6I	GTAC	5 cut(s)	232, 241, 515, 1083, 1106
CviAII	CATG	9 cut(s)	64, 352, 424, 529, 653, 696, 839, 862, 1198
CviQI	GTAC	5 cut(s)	232, 241, 515, 1083, 1106
DdeI	CTNAG	7 cut(s)	236, 414, 705, 715, 723, 729, 1029
DpnI	GATC	7 cut(s)	155, 636, 906, 1182, 1261, 1267, 1317
DpnII	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
DraI	TTTAAA	1 cut(s)	642
DrdI	GACNNNNNNGTC	1 cut(s)	199
DseDI	GACNNNNNNGTC	1 cut(s)	199
Eam1104I	CTCTTC	3 cut(s)	455, 527, 1005
EarI	CTCTTC	3 cut(s)	455, 527, 1005
EciI	GGCGGA	1 cut(s)	977
Eco130I	CCWWGG	1 cut(s)	1109
Eco147I	AGGCCT	1 cut(s)	691
Eco47I	GGWCC	1 cut(s)	271
Eco57I	CTGAAG	2 cut(s)	471, 488
Eco81I	CCTNAGG	2 cut(s)	236, 705
Eco91I	GGTNACC	1 cut(s)	674
EcoO65I	GGTNACC	1 cut(s)	674
EcoRII	CCWGG	6 cut(s)	95, 158, 243, 259, 670, 1291
EcoT14I	CCWWGG	1 cut(s)	1109
ErhI	CCWWGG	1 cut(s)	1109
FaeI	CATG	9 cut(s)	67, 355, 427, 532, 656, 699, 842, 865, 1201
FaqI	GGGAC	1 cut(s)	1274
FatI	CATG	9 cut(s)	63, 351, 423, 528, 652, 695, 838, 861, 1197
FauI	CCCGC	1 cut(s)	951
FbaI	TGATCA	1 cut(s)	1315
FblI	GTMKAC	3 cut(s)	700, 801, 1096
Fnu4HI	GCNGC	8 cut(s)	115, 321, 395, 573, 738, 1160, 1232, 1274
FokI	GGATG	2 cut(s)	983, 1220
Fsp4HI	GCNGC	8 cut(s)	115, 321, 395, 573, 738, 1160, 1232, 1274
FspBI	CTAG	4 cut(s)	44, 1110, 1185, 1245
GlaI	GCGC	1 cut(s)	1235
GluI	GCNGC	8 cut(s)	115, 321, 395, 573, 738, 1160, 1232, 1274
GsuI	CTGGAG	1 cut(s)	990
HaeIII	GGCC	4 cut(s)	164, 691, 1273, 1343
HapII	CCGG	1 cut(s)	1345
HhaI	GCGC	1 cut(s)	1236
Hin1II	CATG	9 cut(s)	67, 355, 427, 532, 656, 699, 842, 865, 1201
Hin6I	GCGC	1 cut(s)	1234
HinP1I	GCGC	1 cut(s)	1234
HincII	GTYRAC	2 cut(s)	1002, 1097
HindII	GTYRAC	2 cut(s)	1002, 1097
HindIII	AAGCTT	1 cut(s)	1048
HinfI	GANTC	8 cut(s)	22, 463, 592, 951, 1003, 1057, 1093, 1310
HpaII	CCGG	1 cut(s)	1345
HphI	GGTGA	3 cut(s)	148, 686, 1307
Hpy166II	GTNNAC	6 cut(s)	6, 701, 802, 1002, 1097, 1137
Hpy188I	TCNGA	6 cut(s)	415, 468, 597, 1032, 1168, 1315
Hpy188III	TCNNGA	9 cut(s)	44, 352, 839, 875, 908, 1007, 1245, 1257, 1263
Hpy8I	GTNNAC	6 cut(s)	6, 701, 802, 1002, 1097, 1137
HpyAV	CCTTC	4 cut(s)	87, 739, 941, 1263
HpyCH4III	ACNGT	3 cut(s)	10, 475, 1105
HpyCH4V	TGCA	5 cut(s)	6, 378, 394, 572, 659
HpyF10VI	GCNNNNNNNGC	2 cut(s)	317, 734
HpyF3I	CTNAG	7 cut(s)	236, 414, 705, 715, 723, 729, 1029
Hsp92II	CATG	9 cut(s)	67, 355, 427, 532, 656, 699, 842, 865, 1201
HspAI	GCGC	1 cut(s)	1234
KpnI	GGTACC	1 cut(s)	244
Ksp22I	TGATCA	1 cut(s)	1315
KspI	CCGCGG	1 cut(s)	1089
Kzo9I	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
LguI	GCTCTTC	1 cut(s)	1005
Lsp1109I	GCAGC	6 cut(s)	332, 406, 584, 749, 1171, 1218
MabI	ACCWGGT	1 cut(s)	243
MaeI	CTAG	4 cut(s)	44, 1110, 1185, 1245
MaeIII	GTNAC	3 cut(s)	201, 433, 674
MalI	GATC	7 cut(s)	155, 636, 906, 1182, 1261, 1267, 1317
MboI	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
MfeI	CAATTG	2 cut(s)	81, 1363
MhlI	GDGCHC	2 cut(s)	8, 536
MluCI	AATT	9 cut(s)	51, 81, 366, 823, 870, 1071, 1115, 1176, 1363
MlyI	GAGTC	4 cut(s)	472, 997, 1102, 1304
MmeI	TCCRAC	2 cut(s)	109, 915
MroXI	GAANNNNTTC	1 cut(s)	136
MseI	TTAA	4 cut(s)	339, 365, 641, 1074
MslI	CAYNNNNRTG	2 cut(s)	440, 1202
MspA1I	CMGCKG	2 cut(s)	1088, 1162
MspI	CCGG	1 cut(s)	1345
MspR9I	CCNGG	7 cut(s)	97, 160, 245, 261, 672, 1293, 1345
MunI	CAATTG	2 cut(s)	81, 1363
Mva1269I	GAATGC	1 cut(s)	574
MvaI	CCWGG	6 cut(s)	97, 160, 245, 261, 672, 1293
MvnI	CGCG	1 cut(s)	1088
MwoI	GCNNNNNNNGC	2 cut(s)	317, 734
NciI	CCSGG	1 cut(s)	1345
NdeII	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
NlaIII	CATG	9 cut(s)	67, 355, 427, 532, 656, 699, 842, 865, 1201
NlaIV	GGNNCC	1 cut(s)	242
NmuCI	GTSAC	3 cut(s)	201, 433, 674
PagI	TCATGA	2 cut(s)	351, 838
PceI	AGGCCT	1 cut(s)	691
PciSI	GCTCTTC	1 cut(s)	1005
PcsI	WCGNNNNNNNCGW	1 cut(s)	643
PctI	GAATGC	1 cut(s)	574
PdmI	GAANNNNTTC	1 cut(s)	136
PfeI	GAWTC	4 cut(s)	22, 592, 951, 1057
PkrI	GCNGC	8 cut(s)	116, 322, 396, 574, 739, 1161, 1233, 1275
PleI	GAGTC	4 cut(s)	471, 997, 1101, 1304
PpsI	GAGTC	4 cut(s)	471, 997, 1101, 1304
PshBI	ATTAAT	1 cut(s)	365
PsiI	TTATAA	2 cut(s)	14, 228
Psp6I	CCWGG	6 cut(s)	95, 158, 243, 259, 670, 1291
PspEI	GGTNACC	1 cut(s)	674
PspGI	CCWGG	6 cut(s)	95, 158, 243, 259, 670, 1291
PspN4I	GGNNCC	1 cut(s)	242
PspPI	GGNCC	3 cut(s)	162, 271, 1342
PvuII	CAGCTG	1 cut(s)	1162
RsaI	GTAC	5 cut(s)	233, 242, 516, 1084, 1107
RsaNI	GTAC	5 cut(s)	232, 241, 515, 1083, 1106
RseI	CAYNNNNRTG	2 cut(s)	440, 1202
SacII	CCGCGG	1 cut(s)	1089
SalI	GTCGAC	1 cut(s)	1095
SapI	GCTCTTC	1 cut(s)	1005
SaqAI	TTAA	4 cut(s)	339, 365, 641, 1074
SatI	GCNGC	8 cut(s)	115, 321, 395, 573, 738, 1160, 1232, 1274
Sau3AI	GATC	7 cut(s)	153, 634, 904, 1180, 1259, 1265, 1315
Sau96I	GGNCC	3 cut(s)	162, 271, 1342
SchI	GAGTC	4 cut(s)	472, 997, 1102, 1304
ScrFI	CCNGG	7 cut(s)	97, 160, 245, 261, 672, 1293, 1345
SduI	GDGCHC	2 cut(s)	8, 536
SexAI	ACCWGGT	1 cut(s)	243
SfcI	CTRYAG	1 cut(s)	1101
Sfr303I	CCGCGG	1 cut(s)	1089
SgrBI	CCGCGG	1 cut(s)	1089
SinI	GGWCC	1 cut(s)	271
SmiMI	CAYNNNNRTG	2 cut(s)	440, 1202
SmlI	CTYRAG	1 cut(s)	926
SmoI	CTYRAG	1 cut(s)	926
Sse9I	AATT	9 cut(s)	51, 81, 366, 823, 870, 1071, 1115, 1176, 1363
SseBI	AGGCCT	1 cut(s)	691
SsiI	CCGC	6 cut(s)	114, 958, 962, 1086, 1088, 1274
SspI	AATATT	1 cut(s)	105
SspMI	CTAG	4 cut(s)	44, 1110, 1185, 1245
StuI	AGGCCT	1 cut(s)	691
StyD4I	CCNGG	7 cut(s)	95, 158, 243, 259, 670, 1291, 1343
StyI	CCWWGG	1 cut(s)	1109
TaaI	ACNGT	3 cut(s)	10, 475, 1105
TaqI	TCGA	1 cut(s)	1096
TaqII	GACCGA	2 cut(s)	288, 557
TasI	AATT	9 cut(s)	51, 81, 366, 823, 870, 1071, 1115, 1176, 1363
TauI	GCSGC	2 cut(s)	117, 1276
TfiI	GAWTC	4 cut(s)	22, 592, 951, 1057
Tru1I	TTAA	4 cut(s)	339, 365, 641, 1074
Tru9I	TTAA	4 cut(s)	339, 365, 641, 1074
TscAI	CASTG	1 cut(s)	1338
TseFI	GTSAC	3 cut(s)	201, 433, 674
TseI	GCWGC	6 cut(s)	320, 394, 572, 737, 1159, 1231
Tsp45I	GTSAC	3 cut(s)	201, 433, 674
TspGWI	ACGGA	1 cut(s)	550
TspRI	CASTG	1 cut(s)	1338
VneI	GTGCAC	1 cut(s)	4
VpaK11BI	GGWCC	1 cut(s)	271
VspI	ATTAAT	1 cut(s)	365
XapI	RAATTY	2 cut(s)	870, 1115
XbaI	TCTAGA	2 cut(s)	43, 1244
XcmI	CCANNNNNNNNNTGG	1 cut(s)	285
XmaJI	CCTAGG	1 cut(s)	1109
XmiI	GTMKAC	3 cut(s)	700, 801, 1096
XmnI	GAANNNNTTC	1 cut(s)	136
XspI	CTAG	4 cut(s)	44, 1110, 1185, 1245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.