Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003795

Physical Location & Seq

Genomic Coordinates Reverse (-)

8431973 .. 8435105

Gene Structure 3133 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14720.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 948 bp

ATGGATGTAGGAGTTACTACGGCGAAGTCTATACTTGAGAAGCCTCTGAAGCTTCTCACTGAAGAAGACATTTCTCAGCTTACTCGCGAAGATTGCCGCAAATTCCTCAAAGAGAAAGGAATGCGCAGGCCTTCGTGGAATAAATCTCAGGCGATCCAGCAAGTTTTATCTCTTAAAGCTCTCTATGAACCTGGAGATGATTCCGGCGCCGGAATCCTCCGCAAGATCCTTGTTTCTCAGCCGCCAAATCCGCCTCGCGTTACAACAACGTTGATTGAGCCAAGGAACGAGCTCGAAGCTTGTGGAAGGATTCCTTTACAGGAAGATGATGGTGCGTGCCATAGAAGGGATTCTCCAAGATCAGCTGAGTTTTCTGGTAGTTCTGGTCAGTTTGTTGCGGATAAAGATAGCCACAAGACTGTTTCTGTTTCCCCCAGAAGCCCAGCTGAAACAAATGCGGTGGTTGGGCAAATGACGATATTTTATAGTGGCAAAGTGAATGTATATGATGGAGTACCACCTGAAAAGGCCCGGTCTATCATGCATTTTGCAGCCAATCCAATTGATTTGCCTGAAAATGGTATTTTTGCTTCTAGTAGAATGATTTCGAAACCCATGAGTAAAGAGAAGATGGTGGAGCTTCCCCAATATGGACTTGAAAAGGCACCTGCTTCTCGTGATTCTGATGTTGAGGGTCAGGCGAACAGAAAAGTATCGTTGCAAAGATATCTTGAAAAGCGGAAAGACAGAAGATTTTCTAAGACCAAGAAGGCTCCAGGAGTTGCGTCCTCTAGCTTGGAGATGTTTCTGAATCGTCAGCCACGGATGAACGCTGCATATTCACAAAACCTTAGTGGCACAGGGCATTGCGAGTCACCTGAAAATCAAACAAAAAGTCCCAATATCTCAGTTGATCTAAACAGTGATCTAAACAGCGAAGATAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003712 GO:0003714 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006950 GO:0007275 GO:0008150 GO:0009611 GO:0009889 GO:0009890 GO:0009892 GO:0009966 GO:0010556 GO:0010558 GO:0010605 GO:0010646 GO:0019219 GO:0019222 GO:0023051 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031347 GO:0032501 GO:0032502 GO:0042127 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045934 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048583 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080090 GO:0080134 GO:0099402 GO:0140110 GO:1902679 GO:1903506 GO:1903507 GO:2000022 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT_2 tify

Protein Analysis

315

Amino Acids

34.85

Weight (kDa)

8.9

Isoelectric Point (pI)

62.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tify	PF06200	157 - 185	2.5e-15	tify domain
Jas_motif	PF09425	233 - 254	3.4e-09	Jas motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003795)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14713 AT4G14713 AT4G14713 AT4G14713 AT4G14713 AT4G14720 AT4G14720
fragaria_vesca	FvH4_4g01120 FvH4_4g01120
malus_domestica	MD13G1199500.v1.1 MD16G1199200.v1.1
prunus_persica	Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1 Prupe.1G020900_v2.0.a1
pyrus_communis	pycom13g17310 pycom16g16780
rosa_chinensis	RchiOBHm_Chr4g0387691
rosa_laevigata	RLG00000010101
rosa_multiflora	Rmu_sc0006621.1_g000001 Rmu_sc0015409.1_g000001 Rmu_sc0028325.1_g000001
rosa_roxburghii	Rroxscaffold_5G00334340
rosa_rugosa	Rorug03G0312500 Rorug03G0312600 Rorug03G0312700
rosa_samantha	Rh4AG017700 Rh4BG012600 Rh4CG018900 Rh4DG013500
rosa_wichuraiana	Rw4G001150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	676
Acc16I	TGCGCA	1 cut(s)	125
Acc36I	ACCTGC	1 cut(s)	676
AccB1I	GGYRCC	2 cut(s)	206, 664
AccII	CGCG	2 cut(s)	87, 258
AciI	CCGC	7 cut(s)	97, 220, 242, 251, 398, 458, 739
AclI	AACGTT	1 cut(s)	269
AclWI	GGATC	2 cut(s)	148, 220
AcsI	RAATTY	1 cut(s)	101
AcuI	CTGAAG	2 cut(s)	68, 81
AcyI	GRCGYC	1 cut(s)	207
AfaI	GTAC	1 cut(s)	516
AfiI	CCNNNNNNNGG	3 cut(s)	346, 578, 650
AgsI	TTSAA	2 cut(s)	659, 734
AjnI	CCWGG	2 cut(s)	190, 775
AluBI	AGCT	9 cut(s)	52, 79, 179, 292, 299, 365, 446, 640, 795
AluI	AGCT	9 cut(s)	52, 79, 179, 292, 299, 365, 446, 640, 795
Alw21I	GWGCWC	1 cut(s)	294
AlwI	GGATC	2 cut(s)	148, 220
AoxI	GGCC	2 cut(s)	128, 528
ApeKI	GCWGC	2 cut(s)	551, 833
ApoI	RAATTY	1 cut(s)	101
ArsI	GACNNNNNNTTYG	2 cut(s)	880, 912
Asp700I	GAANNNNTTC	3 cut(s)	349, 604, 754
AspLEI	GCGC	2 cut(s)	126, 209
AspS9I	GGNCC	1 cut(s)	529
AsuC2I	CCSGG	1 cut(s)	532
AsuHPI	GGTGA	1 cut(s)	867
AsuII	TTCGAA	1 cut(s)	608
BanI	GGYRCC	2 cut(s)	206, 664
BanII	GRGCYC	1 cut(s)	294
BarI	GAAGNNNNNNTAC	2 cut(s)	574, 606
BauI	CACGAG	1 cut(s)	675
BbsI	GAAGAC	1 cut(s)	72
Bbv12I	GWGCWC	1 cut(s)	294
BbvI	GCAGC	2 cut(s)	563, 820
BccI	CCATC	3 cut(s)	323, 503, 625
BceAI	ACGGC	1 cut(s)	36
BciT130I	CCWGG	2 cut(s)	192, 777
BcnI	CCSGG	1 cut(s)	532
BfaI	CTAG	2 cut(s)	594, 792
BfoI	RGCGCY	1 cut(s)	210
BfuAI	ACCTGC	1 cut(s)	676
BisI	GCNGC	4 cut(s)	97, 242, 552, 834
BlsI	GCNGC	4 cut(s)	98, 243, 553, 835
Bme1390I	CCNGG	3 cut(s)	192, 532, 777
BmgT120I	GGNCC	1 cut(s)	529
BmiI	GGNNCC	3 cut(s)	208, 666, 774
BmrFI	CCNGG	3 cut(s)	192, 532, 777
BpiI	GAAGAC	1 cut(s)	72
BpmI	CTGGAG	2 cut(s)	213, 759
Bpu14I	TTCGAA	1 cut(s)	608
BpuEI	CTTGAG	1 cut(s)	56
BpuMI	CCSGG	1 cut(s)	532
BsaHI	GRCGYC	1 cut(s)	207
BsaJI	CCNNGG	2 cut(s)	281, 821
Bsc4I	CCNNNNNNNGG	3 cut(s)	346, 578, 650
Bse3DI	GCAATG	1 cut(s)	865
BseBI	CCWGG	2 cut(s)	192, 777
BseDI	CCNNGG	2 cut(s)	281, 821
BseGI	GGATG	2 cut(s)	10, 831
BseLI	CCNNNNNNNGG	3 cut(s)	346, 578, 650
BseMI	GCAATG	1 cut(s)	865
BseMII	CTCAG	5 cut(s)	89, 161, 251, 357, 921
BseXI	GCAGC	2 cut(s)	563, 820
BseYI	CCCAGC	1 cut(s)	442
Bsh1236I	CGCG	2 cut(s)	87, 258
BshFI	GGCC	2 cut(s)	130, 530
BshNI	GGYRCC	2 cut(s)	206, 664
BsiHKAI	GWGCWC	1 cut(s)	294
BsiSI	CCGG	3 cut(s)	204, 210, 532
BslFI	GGGAC	1 cut(s)	882
BslI	CCNNNNNNNGG	3 cut(s)	346, 578, 650
BsmFI	GGGAC	1 cut(s)	882
BsmI	GAATGC	1 cut(s)	126
BsnI	GGCC	2 cut(s)	130, 530
Bsp119I	TTCGAA	1 cut(s)	608
Bsp1286I	GDGCHC	1 cut(s)	294
Bsp143I	GATC	5 cut(s)	153, 225, 359, 913, 925
Bsp68I	TCGCGA	1 cut(s)	87
BspACI	CCGC	7 cut(s)	97, 220, 242, 251, 398, 458, 739
BspANI	GGCC	2 cut(s)	130, 530
BspCNI	CTCAG	5 cut(s)	88, 160, 250, 358, 920
BspFNI	CGCG	2 cut(s)	87, 258
BspLI	GGNNCC	3 cut(s)	208, 666, 774
BspMI	ACCTGC	1 cut(s)	676
BspPI	GGATC	2 cut(s)	148, 220
BspT104I	TTCGAA	1 cut(s)	608
BspT107I	GGYRCC	2 cut(s)	206, 664
BsrDI	GCAATG	1 cut(s)	865
BssECI	CCNNGG	2 cut(s)	281, 821
BssMI	GATC	5 cut(s)	153, 225, 359, 913, 925
BssNI	GRCGYC	1 cut(s)	207
BssSI	CACGAG	1 cut(s)	675
BssT1I	CCWWGG	1 cut(s)	281
Bst2BI	CACGAG	1 cut(s)	675
Bst2UI	CCWGG	2 cut(s)	192, 777
Bst4CI	ACNGT	2 cut(s)	421, 923
BstACI	GRCGYC	1 cut(s)	207
BstBI	TTCGAA	1 cut(s)	608
BstC8I	GCNNGC	2 cut(s)	128, 337
BstDEI	CTNAG	7 cut(s)	75, 147, 237, 366, 759, 851, 907
BstDSI	CCRYGG	1 cut(s)	821
BstF5I	GGATG	2 cut(s)	10, 831
BstFNI	CGCG	2 cut(s)	87, 258
BstH2I	RGCGCY	1 cut(s)	210
BstHHI	GCGC	2 cut(s)	126, 209
BstKTI	GATC	5 cut(s)	156, 228, 362, 916, 928
BstMBI	GATC	5 cut(s)	153, 225, 359, 913, 925
BstMWI	GCNNNNNNNGC	3 cut(s)	49, 93, 250
BstNI	CCWGG	2 cut(s)	192, 777
BstSCI	CCNGG	3 cut(s)	190, 530, 775
BstUI	CGCG	2 cut(s)	87, 258
BstV1I	GCAGC	2 cut(s)	563, 820
BstV2I	GAAGAC	1 cut(s)	72
BstX2I	RGATCY	1 cut(s)	225
BstYI	RGATCY	1 cut(s)	225
BsuRI	GGCC	2 cut(s)	130, 530
BtgI	CCRYGG	1 cut(s)	821
BtsCI	GGATG	2 cut(s)	10, 831
BtsIMutI	CAGTG	2 cut(s)	57, 928
BtuMI	TCGCGA	1 cut(s)	87
BveI	ACCTGC	1 cut(s)	676
Cac8I	GCNNGC	2 cut(s)	128, 337
CfoI	GCGC	2 cut(s)	126, 209
Cfr13I	GGNCC	1 cut(s)	529
CseI	GACGC	1 cut(s)	774
Csp6I	GTAC	1 cut(s)	515
CspCI	CAANNNNNGTGG	2 cut(s)	441, 476
CviAII	CATG	2 cut(s)	541, 616
CviQI	GTAC	1 cut(s)	515
DdeI	CTNAG	7 cut(s)	75, 147, 237, 366, 759, 851, 907
DinI	GGCGCC	1 cut(s)	208
DpnI	GATC	5 cut(s)	155, 227, 361, 915, 927
DpnII	GATC	5 cut(s)	153, 225, 359, 913, 925
EciI	GGCGGA	1 cut(s)	240
Ecl136II	GAGCTC	1 cut(s)	292
Eco130I	CCWWGG	1 cut(s)	281
Eco147I	AGGCCT	1 cut(s)	130
Eco24I	GRGCYC	1 cut(s)	294
Eco32I	GATATC	1 cut(s)	728
Eco53kI	GAGCTC	1 cut(s)	292
Eco57I	CTGAAG	2 cut(s)	68, 81
EcoICRI	GAGCTC	1 cut(s)	292
EcoRII	CCWGG	2 cut(s)	190, 775
EcoRV	GATATC	1 cut(s)	728
EcoT14I	CCWWGG	1 cut(s)	281
EcoT22I	ATGCAT	1 cut(s)	546
EcoT38I	GRGCYC	1 cut(s)	294
EgeI	GGCGCC	1 cut(s)	208
EheI	GGCGCC	1 cut(s)	208
ErhI	CCWWGG	1 cut(s)	281
FaeI	CATG	2 cut(s)	544, 619
FalI	AAGNNNNNCTT	2 cut(s)	298, 330
FaqI	GGGAC	1 cut(s)	882
FatI	CATG	2 cut(s)	540, 615
Fnu4HI	GCNGC	4 cut(s)	97, 242, 552, 834
FokI	GGATG	2 cut(s)	17, 838
FriOI	GRGCYC	1 cut(s)	294
Fsp4HI	GCNGC	4 cut(s)	97, 242, 552, 834
FspBI	CTAG	2 cut(s)	594, 792
FspI	TGCGCA	1 cut(s)	125
GlaI	GCGC	2 cut(s)	125, 208
GluI	GCNGC	4 cut(s)	97, 242, 552, 834
GsaI	CCCAGC	1 cut(s)	446
GsuI	CTGGAG	2 cut(s)	213, 759
HaeII	RGCGCY	1 cut(s)	210
HaeIII	GGCC	2 cut(s)	130, 530
HapII	CCGG	3 cut(s)	204, 210, 532
HgaI	GACGC	1 cut(s)	774
HhaI	GCGC	2 cut(s)	126, 209
Hin1I	GRCGYC	1 cut(s)	207
Hin1II	CATG	2 cut(s)	544, 619
Hin6I	GCGC	2 cut(s)	124, 207
HinP1I	GCGC	2 cut(s)	124, 207
HindIII	AAGCTT	2 cut(s)	50, 297
HinfI	GANTC	7 cut(s)	200, 213, 310, 350, 680, 811, 872
HpaII	CCGG	3 cut(s)	204, 210, 532
HphI	GGTGA	1 cut(s)	867
Hpy188I	TCNGA	3 cut(s)	48, 685, 810
Hpy188III	TCNNGA	3 cut(s)	86, 677, 731
HpyAV	CCTTC	4 cut(s)	141, 300, 339, 763
HpyCH4III	ACNGT	2 cut(s)	421, 923
HpyCH4IV	ACGT	1 cut(s)	269
HpyCH4V	TGCA	4 cut(s)	544, 551, 721, 836
HpyF10VI	GCNNNNNNNGC	3 cut(s)	49, 93, 250
HpyF3I	CTNAG	7 cut(s)	75, 147, 237, 366, 759, 851, 907
HpySE526I	ACGT	1 cut(s)	269
Hsp92I	GRCGYC	1 cut(s)	207
Hsp92II	CATG	2 cut(s)	544, 619
HspAI	GCGC	2 cut(s)	124, 207
KasI	GGCGCC	1 cut(s)	206
Kzo9I	GATC	5 cut(s)	153, 225, 359, 913, 925
LmnI	GCTCC	2 cut(s)	637, 778
Lsp1109I	GCAGC	2 cut(s)	563, 820
MaeI	CTAG	2 cut(s)	594, 792
MaeII	ACGT	1 cut(s)	269
MaeIII	GTNAC	3 cut(s)	13, 259, 873
MalI	GATC	5 cut(s)	155, 227, 361, 915, 927
MboI	GATC	5 cut(s)	153, 225, 359, 913, 925
MboII	GAAGA	6 cut(s)	74, 77, 101, 335, 640, 762
MfeI	CAATTG	1 cut(s)	561
MflI	RGATCY	1 cut(s)	225
MhlI	GDGCHC	1 cut(s)	294
MluCI	AATT	3 cut(s)	101, 561, 943
Mly113I	GGCGCC	1 cut(s)	207
MlyI	GAGTC	1 cut(s)	881
MnlI	CCTC	6 cut(s)	54, 116, 227, 264, 685, 799
Mph1103I	ATGCAT	1 cut(s)	546
MroXI	GAANNNNTTC	3 cut(s)	349, 604, 754
MseI	TTAA	2 cut(s)	174, 946
MspA1I	CMGCKG	2 cut(s)	365, 446
MspI	CCGG	3 cut(s)	204, 210, 532
MspR9I	CCNGG	3 cut(s)	192, 532, 777
MunI	CAATTG	1 cut(s)	561
Mva1269I	GAATGC	1 cut(s)	126
MvaI	CCWGG	2 cut(s)	192, 777
MvnI	CGCG	2 cut(s)	87, 258
MwoI	GCNNNNNNNGC	3 cut(s)	49, 93, 250
NarI	GGCGCC	1 cut(s)	207
NciI	CCSGG	1 cut(s)	532
NdeII	GATC	5 cut(s)	153, 225, 359, 913, 925
NlaIII	CATG	2 cut(s)	544, 619
NlaIV	GGNNCC	3 cut(s)	208, 666, 774
NmuCI	GTSAC	1 cut(s)	873
NruI	TCGCGA	1 cut(s)	87
NsbI	TGCGCA	1 cut(s)	125
NsiI	ATGCAT	1 cut(s)	546
NspV	TTCGAA	1 cut(s)	608
PaqCI	CACCTGC	1 cut(s)	676
PceI	AGGCCT	1 cut(s)	130
PctI	GAATGC	1 cut(s)	126
PdmI	GAANNNNTTC	3 cut(s)	349, 604, 754
PfeI	GAWTC	6 cut(s)	200, 213, 310, 350, 680, 811
PfoI	TCCNGGA	1 cut(s)	775
PkrI	GCNGC	4 cut(s)	98, 243, 553, 835
PleI	GAGTC	1 cut(s)	880
PluTI	GGCGCC	1 cut(s)	210
PpsI	GAGTC	1 cut(s)	880
Psp124BI	GAGCTC	1 cut(s)	294
Psp1406I	AACGTT	1 cut(s)	269
Psp6I	CCWGG	2 cut(s)	190, 775
PspFI	CCCAGC	1 cut(s)	442
PspGI	CCWGG	2 cut(s)	190, 775
PspN4I	GGNNCC	3 cut(s)	208, 666, 774
PspPI	GGNCC	1 cut(s)	529
PsuI	RGATCY	1 cut(s)	225
PvuII	CAGCTG	2 cut(s)	365, 446
RruI	TCGCGA	1 cut(s)	87
RsaI	GTAC	1 cut(s)	516
RsaNI	GTAC	1 cut(s)	515
SacI	GAGCTC	1 cut(s)	294
SaqAI	TTAA	2 cut(s)	174, 946
SatI	GCNGC	4 cut(s)	97, 242, 552, 834
Sau3AI	GATC	5 cut(s)	153, 225, 359, 913, 925
Sau96I	GGNCC	1 cut(s)	529
SchI	GAGTC	1 cut(s)	881
ScrFI	CCNGG	3 cut(s)	192, 532, 777
SduI	GDGCHC	1 cut(s)	294
SfoI	GGCGCC	1 cut(s)	208
SfuI	TTCGAA	1 cut(s)	608
SmlI	CTYRAG	1 cut(s)	35
SmoI	CTYRAG	1 cut(s)	35
Sse9I	AATT	3 cut(s)	101, 561, 943
SseBI	AGGCCT	1 cut(s)	130
SsiI	CCGC	7 cut(s)	97, 220, 242, 251, 398, 458, 739
SspDI	GGCGCC	1 cut(s)	206
SspMI	CTAG	2 cut(s)	594, 792
SstI	GAGCTC	1 cut(s)	294
StuI	AGGCCT	1 cut(s)	130
StyD4I	CCNGG	3 cut(s)	190, 530, 775
StyI	CCWWGG	1 cut(s)	281
TaaI	ACNGT	2 cut(s)	421, 923
TaiI	ACGT	1 cut(s)	272
TaqI	TCGA	2 cut(s)	294, 608
TasI	AATT	3 cut(s)	101, 561, 943
TauI	GCSGC	2 cut(s)	99, 244
TfiI	GAWTC	6 cut(s)	200, 213, 310, 350, 680, 811
Tru1I	TTAA	2 cut(s)	174, 946
Tru9I	TTAA	2 cut(s)	174, 946
TscAI	CASTG	2 cut(s)	64, 928
TseFI	GTSAC	1 cut(s)	873
TseI	GCWGC	2 cut(s)	551, 833
Tsp45I	GTSAC	1 cut(s)	873
TspDTI	ATGAA	2 cut(s)	201, 842
TspGWI	ACGGA	1 cut(s)	838
TspRI	CASTG	2 cut(s)	64, 928
XapI	RAATTY	1 cut(s)	101
XmnI	GAANNNNTTC	3 cut(s)	349, 604, 754
XspI	CTAG	2 cut(s)	594, 792
Zsp2I	ATGCAT	1 cut(s)	546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.