Prupe.1G020900_v2.0.a1

Protein TIFY 4B-like isoform X1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
1463167 .. 1469284
6118 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G020900.7

Sequence Viewer

Length: 1179 bp
ATGAGACGACGCCGCGCCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACTTCTTTGCTTGCTGCCCTTTCCCCTTTTTCCCCCAATCCCACTTTCGCCCTCCCAACTCCCGCGAAATTACCAACCTGCCCAGATCGCATTCGCAGGGCTCTCCGTCGCCGAAACTCCCGCCATGAACGCCACCACGACGTCGTTCCGCTCCATTCTCGAGAAGCCCCTCAACCAGCTCACAGAGGACGACATTTCTCAGCTCACCCGCGAAGACTGCCGCAAATACCTCAAAGAAAAAGGAATGCGGAGGCCTTCGTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAGGCTCTGCTGGAGCCCAACGACGATACCGGCGCCGGAGCGCTCAGACGGATTGTCGTTTCGCCTCATACCACCACCCCGCGCGCGGCTTCGAATTCAGCCGGTTCGGCCAAGGAAGCGAGTGCCGATGTCCAGGTTTCCGTGTCAGCCGACGAACCGGTGCCGTATCAGAAACCGGTTCAGGAGGACCGGCCAGCCGATGCCGATACGAAGGCCATCAGTCCAAGAAATCAGTGTACAACTGATGCATCAGTTAGGCAAATGACAATTTTCTACTGCGGCAAGGTGAATGTATATGATGGAGTGCCACCTGATAAGGCACGGGCAATCATGCACCTTGCAGCAAGGCCCAACCATTTGCCTCTGGACAATCAATTTGGTGGTACTGCGGCACTAAGATCCTTACGATGCCAATTTCAGACTGCCGGAGACAAAGATGGCTTTCTCCCTCCGAGTGCCACATTCTCTCAGGCCATGCAAACAGAGAAGATCGGTGAATATACTCAGCAGTACTGGGAGAAAGGGAACAGCACTCGAGATCCTGATGCAGAGGGCCAGGCAAGCAGAAAAGTCTCGTTGGAGAGATATCGTGAAAAGCGAAAGGACAGGGGAAGATTAAAGATTAAGAAAAATATTGGATCGAGTTCTAGCTTGGAGGTCTTTTTGAATCATCAACTTAGGACACATACCTCAAATGGTAATTCAAGTCAGAGTGGCACAAGCTCTCCACCCCAGCCTGGGCTGCTACAAACAGCTGACAATCAGCCAAAGAGTCTGTGTCTTCCCGTTGACCTAAATGACAAGGATATCCTGGAACGCCGAACTTGA

Protein Analysis

393

Amino Acids

43.26

Weight (kDa)

9.43

Isoelectric Point (pI)

50.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 197
Acc36I ACCTGC 1 cut(s) 139
AccB1I GGYRCC 2 cut(s) 383, 511
AccBSI CCGCTC 1 cut(s) 204
AccII CGCG 6 cut(s) 15, 118, 264, 433, 435, 437
AclWI GGATC 4 cut(s) 325, 744, 884, 997
AcoI YGGCCR 2 cut(s) 459, 542
AcsI RAATTY 1 cut(s) 445
AcyI GRCGYC 3 cut(s) 10, 194, 384
AfaI GTAC 3 cut(s) 589, 736, 863
AfeI AGCGCT 1 cut(s) 393
AfiI CCNNNNNNNGG 3 cut(s) 436, 1088, 1089
AgeI ACCGGT 2 cut(s) 508, 526
AgsI TTSAA 2 cut(s) 1018, 1056
AhdI GACNNNNNGTC 1 cut(s) 404
AjnI CCWGG 4 cut(s) 483, 906, 1087, 1161
AjuI GAANNNNNNNTTGG 2 cut(s) 82, 114
AluBI AGCT 5 cut(s) 232, 256, 1002, 1074, 1106
AluI AGCT 5 cut(s) 232, 256, 1002, 1074, 1106
Alw26I GTCTC 2 cut(s) 774, 928
AlwI GGATC 4 cut(s) 325, 744, 884, 997
Ama87I CYCGRG 2 cut(s) 212, 885
Aor51HI AGCGCT 1 cut(s) 393
AoxI GGCC 7 cut(s) 305, 459, 542, 564, 698, 822, 904
ApeKI GCWGC 3 cut(s) 67, 692, 1093
ApoI RAATTY 1 cut(s) 445
ArsI GACNNNNNNTTYG 2 cut(s) 710, 742
AsiGI ACCGGT 2 cut(s) 508, 526
AspLEI GCGC 5 cut(s) 17, 386, 394, 435, 437
AspS9I GGNCC 3 cut(s) 538, 699, 904
AsuHPI GGTGA 3 cut(s) 250, 649, 857
AsuII TTCGAA 1 cut(s) 443
AvaI CYCGRG 2 cut(s) 212, 885
AvaII GGWCC 1 cut(s) 538
BanI GGYRCC 2 cut(s) 383, 511
BanII GRGCYC 2 cut(s) 156, 369
BbsI GAAGAC 2 cut(s) 273, 1124
BbvI GCAGC 3 cut(s) 54, 704, 1080
BccI CCATC 3 cut(s) 575, 644, 782
BceAI ACGGC 1 cut(s) 499
BciT130I CCWGG 4 cut(s) 485, 908, 1089, 1163
BcoDI GTCTC 2 cut(s) 774, 928
BfaI CTAG 1 cut(s) 999
BfoI RGCGCY 2 cut(s) 387, 395
BfuAI ACCTGC 1 cut(s) 139
BglI GCCNNNNNGGC 1 cut(s) 458
BisI GCNGC 8 cut(s) 13, 68, 274, 438, 631, 693, 741, 1094
BlsI GCNGC 8 cut(s) 14, 69, 275, 439, 632, 694, 742, 1095
BmcAI AGTACT 1 cut(s) 863
Bme1390I CCNGG 4 cut(s) 485, 908, 1089, 1163
Bme18I GGWCC 1 cut(s) 538
BmeRI GACNNNNNGTC 1 cut(s) 404
BmeT110I CYCGRG 2 cut(s) 212, 885
BmgT120I GGNCC 3 cut(s) 538, 699, 904
BmiI GGNNCC 3 cut(s) 366, 385, 513
BmrFI CCNGG 4 cut(s) 485, 908, 1089, 1163
BmrI ACTGGG 1 cut(s) 874
BmsI GCATC 5 cut(s) 541, 586, 608, 749, 886
BmuI ACTGGG 1 cut(s) 874
BpiI GAAGAC 2 cut(s) 273, 1124
BpmI CTGGAG 1 cut(s) 383
Bpu14I TTCGAA 1 cut(s) 443
BpuEI CTTGAG 1 cut(s) 335
BsaHI GRCGYC 3 cut(s) 10, 194, 384
BsaJI CCNNGG 2 cut(s) 462, 1088
BsaWI WCCGGW 2 cut(s) 508, 526
BsaXI ACNNNNNCTCC 2 cut(s) 1060, 1090
Bsc4I CCNNNNNNNGG 3 cut(s) 436, 1088, 1089
Bse118I RCCGGY 5 cut(s) 380, 452, 508, 526, 540
Bse1I ACTGG 1 cut(s) 869
BseBI CCWGG 4 cut(s) 485, 908, 1089, 1163
BseDI CCNNGG 2 cut(s) 462, 1088
BseLI CCNNNNNNNGG 3 cut(s) 436, 1088, 1089
BseMII CTCAG 4 cut(s) 266, 409, 833, 869
BseNI ACTGG 1 cut(s) 869
BsePI GCGCGC 1 cut(s) 433
BseXI GCAGC 3 cut(s) 54, 704, 1080
BseYI CCCAGC 1 cut(s) 1083
Bsh1236I CGCG 6 cut(s) 15, 118, 264, 433, 435, 437
BshFI GGCC 7 cut(s) 307, 461, 544, 566, 700, 824, 906
BshNI GGYRCC 2 cut(s) 383, 511
BshTI ACCGGT 2 cut(s) 508, 526
BsiHKCI CYCGRG 2 cut(s) 212, 885
BsiSI CCGG 7 cut(s) 381, 387, 453, 509, 527, 541, 777
BslI CCNNNNNNNGG 3 cut(s) 436, 1088, 1089
BsmAI GTCTC 2 cut(s) 774, 928
BsmI GAATGC 2 cut(s) 143, 303
BsnI GGCC 7 cut(s) 307, 461, 544, 566, 700, 824, 906
BsoBI CYCGRG 2 cut(s) 212, 885
Bsp119I TTCGAA 1 cut(s) 443
Bsp1286I GDGCHC 2 cut(s) 156, 369
Bsp1407I TGTACA 1 cut(s) 587
Bsp143I GATC 6 cut(s) 138, 330, 749, 840, 889, 989
BspANI GGCC 7 cut(s) 307, 461, 544, 566, 700, 824, 906
BspCNI CTCAG 4 cut(s) 265, 408, 832, 868
BspFNI CGCG 6 cut(s) 15, 118, 264, 433, 435, 437
BspLI GGNNCC 3 cut(s) 366, 385, 513
BspMI ACCTGC 1 cut(s) 139
BspPI GGATC 4 cut(s) 325, 744, 884, 997
BspT104I TTCGAA 1 cut(s) 443
BspT107I GGYRCC 2 cut(s) 383, 511
BsrBI CCGCTC 1 cut(s) 204
BsrFI RCCGGY 5 cut(s) 380, 452, 508, 526, 540
BsrGI TGTACA 1 cut(s) 587
BsrI ACTGG 1 cut(s) 869
BssAI RCCGGY 5 cut(s) 380, 452, 508, 526, 540
BssECI CCNNGG 2 cut(s) 462, 1088
BssHII GCGCGC 1 cut(s) 433
BssMI GATC 6 cut(s) 138, 330, 749, 840, 889, 989
BssNI GRCGYC 3 cut(s) 10, 194, 384
BssT1I CCWWGG 1 cut(s) 462
Bst2UI CCWGG 4 cut(s) 485, 908, 1089, 1163
BstACI GRCGYC 3 cut(s) 10, 194, 384
BstAUI TGTACA 1 cut(s) 587
BstBI TTCGAA 1 cut(s) 443
BstC8I GCNNGC 5 cut(s) 65, 327, 435, 546, 913
BstDEI CTNAG 6 cut(s) 252, 395, 746, 819, 855, 1028
BstFNI CGCG 6 cut(s) 15, 118, 264, 433, 435, 437
BstH2I RGCGCY 2 cut(s) 387, 395
BstHHI GCGC 5 cut(s) 17, 386, 394, 435, 437
BstKTI GATC 6 cut(s) 141, 333, 752, 843, 892, 992
BstMAI GTCTC 2 cut(s) 774, 928
BstMBI GATC 6 cut(s) 138, 330, 749, 840, 889, 989
BstMWI GCNNNNNNNGC 7 cut(s) 140, 182, 270, 458, 467, 912, 1093
BstNI CCWGG 4 cut(s) 485, 908, 1089, 1163
BstSCI CCNGG 4 cut(s) 483, 906, 1087, 1161
BstUI CGCG 6 cut(s) 15, 118, 264, 433, 435, 437
BstV1I GCAGC 3 cut(s) 54, 704, 1080
BstV2I GAAGAC 2 cut(s) 273, 1124
BstX2I RGATCY 2 cut(s) 749, 889
BstYI RGATCY 2 cut(s) 749, 889
BsuRI GGCC 7 cut(s) 307, 461, 544, 566, 700, 824, 906
BtsIMutI CAGTG 1 cut(s) 590
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 5 cut(s) 65, 327, 435, 546, 913
CfoI GCGC 5 cut(s) 17, 386, 394, 435, 437
Cfr10I RCCGGY 5 cut(s) 380, 452, 508, 526, 540
Cfr13I GGNCC 3 cut(s) 538, 699, 904
CseI GACGC 1 cut(s) 18
Csp6I GTAC 3 cut(s) 588, 735, 862
CspAI ACCGGT 2 cut(s) 508, 526
CviAII CATG 3 cut(s) 178, 682, 826
CviQI GTAC 3 cut(s) 588, 735, 862
DdeI CTNAG 6 cut(s) 252, 395, 746, 819, 855, 1028
DinI GGCGCC 1 cut(s) 385
DpnI GATC 6 cut(s) 140, 332, 751, 842, 891, 991
DpnII GATC 6 cut(s) 138, 330, 749, 840, 889, 989
DriI GACNNNNNGTC 1 cut(s) 404
EaeI YGGCCR 2 cut(s) 459, 542
Eam1105I GACNNNNNGTC 1 cut(s) 404
Eco130I CCWWGG 1 cut(s) 462
Eco147I AGGCCT 1 cut(s) 307
Eco24I GRGCYC 2 cut(s) 156, 369
Eco32I GATATC 2 cut(s) 938, 1159
Eco47I GGWCC 1 cut(s) 538
Eco47III AGCGCT 1 cut(s) 393
Eco88I CYCGRG 2 cut(s) 212, 885
EcoRI GAATTC 1 cut(s) 445
EcoRII CCWGG 4 cut(s) 483, 906, 1087, 1161
EcoRV GATATC 2 cut(s) 938, 1159
EcoT14I CCWWGG 1 cut(s) 462
EcoT22I ATGCAT 1 cut(s) 601
EcoT38I GRGCYC 2 cut(s) 156, 369
EgeI GGCGCC 1 cut(s) 385
EheI GGCGCC 1 cut(s) 385
ErhI CCWWGG 1 cut(s) 462
FaeI CATG 3 cut(s) 181, 685, 829
FaiI YATR 8 cut(s) 179, 420, 646, 648, 683, 827, 852, 1038
FatI CATG 3 cut(s) 177, 681, 825
FauI CCCGC 4 cut(s) 123, 181, 269, 438
Fnu4HI GCNGC 8 cut(s) 13, 68, 274, 438, 631, 693, 741, 1094
FriOI GRGCYC 2 cut(s) 156, 369
Fsp4HI GCNGC 8 cut(s) 13, 68, 274, 438, 631, 693, 741, 1094
FspBI CTAG 1 cut(s) 999
GlaI GCGC 5 cut(s) 16, 385, 393, 434, 436
GluI GCNGC 8 cut(s) 13, 68, 274, 438, 631, 693, 741, 1094
GsaI CCCAGC 1 cut(s) 1087
GsuI CTGGAG 1 cut(s) 383
HaeII RGCGCY 2 cut(s) 387, 395
HaeIII GGCC 7 cut(s) 307, 461, 544, 566, 700, 824, 906
HapII CCGG 7 cut(s) 381, 387, 453, 509, 527, 541, 777
HgaI GACGC 1 cut(s) 18
HhaI GCGC 5 cut(s) 17, 386, 394, 435, 437
Hin1I GRCGYC 3 cut(s) 10, 194, 384
Hin1II CATG 3 cut(s) 181, 685, 829
Hin6I GCGC 5 cut(s) 15, 384, 392, 433, 435
HinP1I GCGC 5 cut(s) 15, 384, 392, 433, 435
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HinfI GANTC 2 cut(s) 1018, 1123
HpaII CCGG 7 cut(s) 381, 387, 453, 509, 527, 541, 777
HphI GGTGA 3 cut(s) 250, 649, 857
Hpy166II GTNNAC 2 cut(s) 588, 1141
Hpy188I TCNGA 5 cut(s) 398, 522, 771, 804, 1062
Hpy188III TCNNGA 7 cut(s) 212, 214, 533, 716, 887, 893, 941
Hpy8I GTNNAC 2 cut(s) 588, 1141
Hpy99I CGWCG 6 cut(s) 12, 164, 196, 199, 377, 506
HpyAV CCTTC 2 cut(s) 318, 556
HpyCH4IV ACGT 1 cut(s) 194
HpyCH4V TGCA 5 cut(s) 599, 685, 692, 829, 899
HpyF10VI GCNNNNNNNGC 7 cut(s) 140, 182, 270, 458, 467, 912, 1093
HpyF3I CTNAG 6 cut(s) 252, 395, 746, 819, 855, 1028
HpySE526I ACGT 1 cut(s) 194
Hsp92I GRCGYC 3 cut(s) 10, 194, 384
Hsp92II CATG 3 cut(s) 181, 685, 829
HspAI GCGC 5 cut(s) 15, 384, 392, 433, 435
KasI GGCGCC 1 cut(s) 383
Kzo9I GATC 6 cut(s) 138, 330, 749, 840, 889, 989
LmnI GCTCC 3 cut(s) 209, 364, 389
Lsp1109I GCAGC 3 cut(s) 54, 704, 1080
LweI GCATC 5 cut(s) 541, 586, 608, 749, 886
MaeI CTAG 1 cut(s) 999
MaeII ACGT 1 cut(s) 194
MalI GATC 6 cut(s) 140, 332, 751, 842, 891, 991
MauBI CGCGCGCG 1 cut(s) 433
MbiI CCGCTC 1 cut(s) 204
MboI GATC 6 cut(s) 138, 330, 749, 840, 889, 989
MboII GAAGA 4 cut(s) 278, 850, 975, 1124
MflI RGATCY 2 cut(s) 749, 889
MhlI GDGCHC 2 cut(s) 156, 369
MluCI AATT 6 cut(s) 121, 445, 618, 725, 764, 1051
Mly113I GGCGCC 1 cut(s) 384
MlyI GAGTC 1 cut(s) 1132
MmeI TCCRAC 1 cut(s) 909
Mph1103I ATGCAT 1 cut(s) 601
MseI TTAA 2 cut(s) 968, 975
MspA1I CMGCKG 1 cut(s) 1106
MspI CCGG 7 cut(s) 381, 387, 453, 509, 527, 541, 777
MspR9I CCNGG 4 cut(s) 485, 908, 1089, 1163
Mva1269I GAATGC 2 cut(s) 143, 303
MvaI CCWGG 4 cut(s) 485, 908, 1089, 1163
MvnI CGCG 6 cut(s) 15, 118, 264, 433, 435, 437
MwoI GCNNNNNNNGC 7 cut(s) 140, 182, 270, 458, 467, 912, 1093
NarI GGCGCC 1 cut(s) 384
NdeII GATC 6 cut(s) 138, 330, 749, 840, 889, 989
NlaIII CATG 3 cut(s) 181, 685, 829
NlaIV GGNNCC 3 cut(s) 366, 385, 513
NsiI ATGCAT 1 cut(s) 601
NspV TTCGAA 1 cut(s) 443
PaeR7I CTCGAG 2 cut(s) 212, 885
PauI GCGCGC 1 cut(s) 433
PceI AGGCCT 1 cut(s) 307
PcsI WCGNNNNNNNCGW 1 cut(s) 946
PctI GAATGC 2 cut(s) 143, 303
PfeI GAWTC 1 cut(s) 1018
PfoI TCCNGGA 1 cut(s) 1161
PinAI ACCGGT 2 cut(s) 508, 526
PkrI GCNGC 8 cut(s) 14, 69, 275, 439, 632, 694, 742, 1095
PleI GAGTC 1 cut(s) 1131
PluTI GGCGCC 1 cut(s) 387
PpsI GAGTC 1 cut(s) 1131
Psp6I CCWGG 4 cut(s) 483, 906, 1087, 1161
PspFI CCCAGC 1 cut(s) 1083
PspGI CCWGG 4 cut(s) 483, 906, 1087, 1161
PspN4I GGNNCC 3 cut(s) 366, 385, 513
PspPI GGNCC 3 cut(s) 538, 699, 904
PsuI RGATCY 2 cut(s) 749, 889
PteI GCGCGC 1 cut(s) 433
PvuII CAGCTG 1 cut(s) 1106
RsaI GTAC 3 cut(s) 589, 736, 863
RsaNI GTAC 3 cut(s) 588, 735, 862
SaqAI TTAA 2 cut(s) 968, 975
SatI GCNGC 8 cut(s) 13, 68, 274, 438, 631, 693, 741, 1094
Sau3AI GATC 6 cut(s) 138, 330, 749, 840, 889, 989
Sau96I GGNCC 3 cut(s) 538, 699, 904
ScaI AGTACT 1 cut(s) 863
SchI GAGTC 1 cut(s) 1132
ScrFI CCNGG 4 cut(s) 485, 908, 1089, 1163
SduI GDGCHC 2 cut(s) 156, 369
SfaNI GCATC 5 cut(s) 541, 586, 608, 749, 886
SfoI GGCGCC 1 cut(s) 385
Sfr274I CTCGAG 2 cut(s) 212, 885
SfuI TTCGAA 1 cut(s) 443
SinI GGWCC 1 cut(s) 538
SlaI CTCGAG 2 cut(s) 212, 885
SmlI CTYRAG 3 cut(s) 212, 350, 885
SmoI CTYRAG 3 cut(s) 212, 350, 885
Sse9I AATT 6 cut(s) 121, 445, 618, 725, 764, 1051
SseBI AGGCCT 1 cut(s) 307
SspDI GGCGCC 1 cut(s) 383
SspI AATATT 1 cut(s) 985
SspMI CTAG 1 cut(s) 999
StuI AGGCCT 1 cut(s) 307
StyD4I CCNGG 4 cut(s) 483, 906, 1087, 1161
StyI CCWWGG 1 cut(s) 462
TaiI ACGT 1 cut(s) 197
TaqI TCGA 4 cut(s) 213, 443, 886, 992
TasI AATT 6 cut(s) 121, 445, 618, 725, 764, 1051
TatI WGTACW 2 cut(s) 587, 861
TauI GCSGC 5 cut(s) 15, 276, 440, 633, 743
TfiI GAWTC 1 cut(s) 1018
Tru1I TTAA 2 cut(s) 968, 975
Tru9I TTAA 2 cut(s) 968, 975
TscAI CASTG 1 cut(s) 590
TseI GCWGC 3 cut(s) 67, 692, 1093
TspDTI ATGAA 1 cut(s) 194
TspGWI ACGGA 3 cut(s) 148, 415, 481
TspRI CASTG 1 cut(s) 590
VpaK11BI GGWCC 1 cut(s) 538
XapI RAATTY 1 cut(s) 445
XhoI CTCGAG 2 cut(s) 212, 885
XspI CTAG 1 cut(s) 999
ZraI GACGTC 1 cut(s) 195
ZrmI AGTACT 1 cut(s) 863
Zsp2I ATGCAT 1 cut(s) 601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.