AT4G17215

Pollen proteins Ole e I like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
9655669 .. 9656654
986 bp
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UTR
Exon/CDS
Intron
AT4G17215.1

Sequence Viewer

Length: 453 bp
ATGAGGTTCTTGTTGATGAGCATGACGTTGGTATTAATTGTGACGTTTGGGGAAGCATTTAGTGATAGATGGAGCAGAGATGAGATGGTGGAGATGGCTGGCTACGGCGAACAAAAACTCTCCTCTGTTCTTCTCACCGCCTCTCTTCTCTCTTCCTCCTCCTCCCCTATTCATGGAGCTACTATTGGCTTCAAGTGCCATACTGGACATAGGAGGAGATCTAAATGGATCAAAGCTGTGACAAATGAGTTGGGGCAATTCGTCATCGATCTTCCTTCTCACCTCCACGCGATTCCTGACTTAGACAAGGCTTGTATCATTAAAACACTCTCTGTCCCTAAACCGTATCGATGCTCTTCCAAGATTCACAGAGGTATTCAACTCCTCTCCTCTTCCAACGGCTCTCGTGTCTATACAGCTGGAAATATCACCTTACAAGAGAGCACCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

150

Amino Acids

16.6

Weight (kDa)

9.51

Isoelectric Point (pI)

45.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011999)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 290
AciI CCGC 1 cut(s) 138
AclWI GGATC 1 cut(s) 236
AfiI CCNNNNNNNGG 1 cut(s) 173
AgsI TTSAA 2 cut(s) 193, 380
AluBI AGCT 3 cut(s) 179, 236, 419
AluI AGCT 3 cut(s) 179, 236, 419
Alw21I GWGCWC 1 cut(s) 446
AlwI GGATC 1 cut(s) 236
AseI ATTAAT 1 cut(s) 35
AsuHPI GGTGA 3 cut(s) 127, 272, 421
BauI CACGAG 1 cut(s) 405
Bbv12I GWGCWC 1 cut(s) 446
BccI CCATC 3 cut(s) 63, 79, 88
BceAI ACGGC 2 cut(s) 121, 415
BglII AGATCT 1 cut(s) 218
BmsI GCATC 1 cut(s) 341
Bsa29I ATCGAT 2 cut(s) 267, 349
Bsc4I CCNNNNNNNGG 1 cut(s) 173
Bse1I ACTGG 1 cut(s) 208
BseCI ATCGAT 2 cut(s) 267, 349
BseLI CCNNNNNNNGG 1 cut(s) 173
BseNI ACTGG 1 cut(s) 208
BseRI GAGGAG 6 cut(s) 112, 148, 151, 229, 374, 379
Bsh1236I CGCG 1 cut(s) 290
BshVI ATCGAT 2 cut(s) 267, 349
BsiHKAI GWGCWC 1 cut(s) 446
BslFI GGGAC 1 cut(s) 320
BslI CCNNNNNNNGG 1 cut(s) 173
BsmFI GGGAC 1 cut(s) 320
Bsp1286I GDGCHC 1 cut(s) 446
Bsp143I GATC 3 cut(s) 218, 228, 268
BspACI CCGC 1 cut(s) 138
BspDI ATCGAT 2 cut(s) 267, 349
BspFNI CGCG 1 cut(s) 290
BspPI GGATC 1 cut(s) 236
BspQI GCTCTTC 1 cut(s) 361
BsrI ACTGG 1 cut(s) 208
BssMI GATC 3 cut(s) 218, 228, 268
BssSI CACGAG 1 cut(s) 405
Bst2BI CACGAG 1 cut(s) 405
Bst4CI ACNGT 1 cut(s) 345
Bst6I CTCTTC 4 cut(s) 150, 157, 361, 397
BstC8I GCNNGC 1 cut(s) 100
BstDEI CTNAG 1 cut(s) 301
BstFNI CGCG 1 cut(s) 290
BstKTI GATC 3 cut(s) 221, 231, 271
BstMBI GATC 3 cut(s) 218, 228, 268
BstMWI GCNNNNNNNGC 1 cut(s) 195
BstUI CGCG 1 cut(s) 290
BstX2I RGATCY 1 cut(s) 218
BstYI RGATCY 1 cut(s) 218
Bsu15I ATCGAT 2 cut(s) 267, 349
BsuTUI ATCGAT 2 cut(s) 267, 349
Cac8I GCNNGC 1 cut(s) 100
ClaI ATCGAT 2 cut(s) 267, 349
CviAII CATG 3 cut(s) 22, 173, 448
CviJI RGCY 8 cut(s) 98, 102, 179, 189, 236, 311, 402, 419
CviKI_1 RGCY 8 cut(s) 98, 102, 179, 189, 236, 311, 402, 419
DdeI CTNAG 1 cut(s) 301
DpnI GATC 3 cut(s) 220, 230, 270
DpnII GATC 3 cut(s) 218, 228, 268
Eam1104I CTCTTC 4 cut(s) 150, 157, 361, 397
EarI CTCTTC 4 cut(s) 150, 157, 361, 397
FaeI CATG 3 cut(s) 25, 176, 451
FaiI YATR 6 cut(s) 23, 174, 201, 210, 414, 449
FaqI GGGAC 1 cut(s) 320
FatI CATG 3 cut(s) 21, 172, 447
Hin1II CATG 3 cut(s) 25, 176, 451
HinfI GANTC 2 cut(s) 292, 364
HphI GGTGA 3 cut(s) 127, 272, 421
Hpy188III TCNNGA 1 cut(s) 296
HpyAV CCTTC 1 cut(s) 285
HpyCH4III ACNGT 1 cut(s) 345
HpyCH4IV ACGT 2 cut(s) 26, 44
HpyF10VI GCNNNNNNNGC 1 cut(s) 195
HpyF3I CTNAG 1 cut(s) 301
HpySE526I ACGT 2 cut(s) 26, 44
Hsp92II CATG 3 cut(s) 25, 176, 451
Kzo9I GATC 3 cut(s) 218, 228, 268
LguI GCTCTTC 1 cut(s) 361
LmnI GCTCC 2 cut(s) 72, 176
LpnPI CCDG 4 cut(s) 84, 189, 309, 405
LweI GCATC 1 cut(s) 341
MaeII ACGT 2 cut(s) 26, 44
MaeIII GTNAC 2 cut(s) 40, 238
MalI GATC 3 cut(s) 220, 230, 270
MboI GATC 3 cut(s) 218, 228, 268
MboII GAAGA 6 cut(s) 122, 137, 144, 263, 348, 384
MflI RGATCY 1 cut(s) 218
MhlI GDGCHC 1 cut(s) 446
MluCI AATT 2 cut(s) 36, 257
MmeI TCCRAC 1 cut(s) 420
MseI TTAA 2 cut(s) 35, 321
MspA1I CMGCKG 1 cut(s) 419
MvnI CGCG 1 cut(s) 290
MwoI GCNNNNNNNGC 1 cut(s) 195
NdeII GATC 3 cut(s) 218, 228, 268
NlaIII CATG 3 cut(s) 25, 176, 451
NmuCI GTSAC 2 cut(s) 40, 238
PciSI GCTCTTC 1 cut(s) 361
PfeI GAWTC 2 cut(s) 292, 364
PshBI ATTAAT 1 cut(s) 35
PsuI RGATCY 1 cut(s) 218
PvuII CAGCTG 1 cut(s) 419
SapI GCTCTTC 1 cut(s) 361
SaqAI TTAA 2 cut(s) 35, 321
Sau3AI GATC 3 cut(s) 218, 228, 268
SduI GDGCHC 1 cut(s) 446
SetI ASST 9 cut(s) 8, 29, 47, 181, 238, 285, 376, 421, 434
SfaNI GCATC 1 cut(s) 341
Sse9I AATT 2 cut(s) 36, 257
SsiI CCGC 1 cut(s) 138
TaaI ACNGT 1 cut(s) 345
TaiI ACGT 2 cut(s) 29, 47
TaqI TCGA 2 cut(s) 267, 349
TasI AATT 2 cut(s) 36, 257
TfiI GAWTC 2 cut(s) 292, 364
Tru1I TTAA 2 cut(s) 35, 321
Tru9I TTAA 2 cut(s) 35, 321
TseFI GTSAC 2 cut(s) 40, 238
Tsp45I GTSAC 2 cut(s) 40, 238
TspDTI ATGAA 1 cut(s) 161
VspI ATTAAT 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.