Prupe.4G004300_v2.0.a1

Pollen proteins Ole e I like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0011999
Physical Location & Seq
Forward (+)
274300 .. 277278
2979 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G004300.1

Sequence Viewer

Length: 669 bp
ATGGTGAGCTACTTTTGCGGCTGGCACAAGCTTGTGAATGATTTCATCTACAAACTAGTTCTGCTAAACCTGTTGATATGCAGCTGCCTCAGCCTCAGCAGATCAGTTTCAATGGCCTCGGCCGCCGATATTGATGATCAAGTACTAGTGAACAACAATAACCCATTAAACCAACTCATGTCCAGCCAAGAAGATATGGTCCAAATTGCTGGATATGGAGAAGAGAAGCTTTCCACCGTCCTAATTACAGGCTCCGTCCATTGCGAGGAGGCTTGTAATAATTTGCATGCTCAAACTCATCATCCTGATTATCAACTTCATCTTCATGCATGGCCTCTCTCAGGTGCTTTGGTTTCTGTCAATTGCCATGTTAGTGGGAGAAAAAGAAAATCAAGCTTGGCACAAGGCTTAGCAGATGAATTTGGGGATTTCATTATTGATCTTCCTTCCAATCTACATGCAATTCCCAACTTGCACAAAACATGTTCGGTTAGAGTAGTTCGAATACCAAAGAACACACAATGCAGACCAGCTTATGTCAGGAGGCACAAGGGACTGAAATTATCGTCAGTTGGTAACGGTATCCGGACTTACAATGCTGGAAATATAAGGTTCCAGCATTTGACCTCTAAACCATCAGAAGCATGCATTAATATGCTATCATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

223

Amino Acids

24.56

Weight (kDa)

8.58

Isoelectric Point (pI)

38.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011999)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G40113 AT4G17215 AT5G47635
fragaria_vesca FvH4_3g00370
malus_domestica MD05G1360900.v1.1 MD10G1338600.v1.1
prunus_persica Prupe.4G004300_v2.0.a1
pyrus_communis pycom05g32770
rosa_chinensis RchiOBHm_Chr5g0000571
rosa_laevigata RLG00000030876
rosa_multiflora Rmu_sc0003699.1_g000003 Rmu_sc0008807.1_g000003
rosa_roxburghii Rroxscaffold_1G00075640
rosa_rugosa Rorug04G0384800
rosa_samantha Rh5AG004600 Rh5BG006300 Rh5CG005000 Rh5DG005000
rosa_wichuraiana Rw5G000460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 585
AciI CCGC 2 cut(s) 18, 123
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 1 cut(s) 419
AfaI GTAC 1 cut(s) 144
AfiI CCNNNNNNNGG 2 cut(s) 265, 341
AflIII ACRYGT 1 cut(s) 482
AgsI TTSAA 1 cut(s) 111
AhlI ACTAGT 2 cut(s) 55, 145
AluBI AGCT 6 cut(s) 9, 31, 84, 229, 396, 533
AluI AGCT 6 cut(s) 9, 31, 84, 229, 396, 533
Aor13HI TCCGGA 1 cut(s) 585
AoxI GGCC 3 cut(s) 114, 120, 332
ApeKI GCWGC 2 cut(s) 81, 84
ApoI RAATTY 1 cut(s) 419
AseI ATTAAT 1 cut(s) 651
Asp700I GAANNNNTTC 1 cut(s) 41
AspS9I GGNCC 1 cut(s) 199
AsuHPI GGTGA 1 cut(s) 16
AsuII TTCGAA 1 cut(s) 502
AvaII GGWCC 1 cut(s) 199
BbvCI CCTCAGC 2 cut(s) 89, 95
BbvI GCAGC 2 cut(s) 71, 93
BccI CCATC 1 cut(s) 643
BciVI GTATCC 1 cut(s) 593
BclI TGATCA 1 cut(s) 136
BcuI ACTAGT 2 cut(s) 55, 145
BfaI CTAG 2 cut(s) 56, 146
BfuI GTATCC 1 cut(s) 593
BisI GCNGC 4 cut(s) 19, 82, 85, 123
BlpI GCTNAGC 1 cut(s) 409
BlsI GCNGC 4 cut(s) 20, 83, 86, 124
BmcAI AGTACT 1 cut(s) 144
Bme18I GGWCC 1 cut(s) 199
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 2 cut(s) 253, 614
Bpu10I CCTNAGC 2 cut(s) 89, 95
Bpu1102I GCTNAGC 1 cut(s) 409
Bpu14I TTCGAA 1 cut(s) 502
BsaJI CCNNGG 1 cut(s) 117
BsaWI WCCGGW 1 cut(s) 585
Bsc4I CCNNNNNNNGG 2 cut(s) 265, 341
Bse3DI GCAATG 1 cut(s) 259
BseAI TCCGGA 1 cut(s) 585
BseDI CCNNGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 301
BseLI CCNNNNNNNGG 2 cut(s) 265, 341
BseMI GCAATG 1 cut(s) 259
BseMII CTCAG 3 cut(s) 103, 109, 354
BseRI GAGGAG 1 cut(s) 281
BseX3I CGGCCG 1 cut(s) 120
BseXI GCAGC 2 cut(s) 71, 93
Bsh1285I CGRYCG 1 cut(s) 123
BshFI GGCC 3 cut(s) 116, 122, 334
BsiEI CGRYCG 1 cut(s) 123
BsiSI CCGG 1 cut(s) 586
BslFI GGGAC 1 cut(s) 567
BslI CCNNNNNNNGG 2 cut(s) 265, 341
BsmFI GGGAC 1 cut(s) 567
BsnI GGCC 3 cut(s) 116, 122, 334
Bsp119I TTCGAA 1 cut(s) 502
Bsp13I TCCGGA 1 cut(s) 585
Bsp143I GATC 3 cut(s) 101, 136, 439
Bsp1720I GCTNAGC 1 cut(s) 409
BspACI CCGC 2 cut(s) 18, 123
BspANI GGCC 3 cut(s) 116, 122, 334
BspCNI CTCAG 3 cut(s) 102, 108, 353
BspEI TCCGGA 1 cut(s) 585
BspLI GGNNCC 2 cut(s) 253, 614
BspT104I TTCGAA 1 cut(s) 502
BsrDI GCAATG 1 cut(s) 259
BssECI CCNNGG 1 cut(s) 117
BssMI GATC 3 cut(s) 101, 136, 439
Bst4CI ACNGT 2 cut(s) 238, 581
Bst6I CTCTTC 1 cut(s) 216
BstBI TTCGAA 1 cut(s) 502
BstC8I GCNNGC 3 cut(s) 23, 288, 646
BstDEI CTNAG 4 cut(s) 89, 95, 340, 409
BstENI CCTNNNNNAGG 1 cut(s) 339
BstF5I GGATG 1 cut(s) 301
BstKTI GATC 3 cut(s) 104, 139, 442
BstMBI GATC 3 cut(s) 101, 136, 439
BstMCI CGRYCG 1 cut(s) 123
BstMWI GCNNNNNNNGC 3 cut(s) 15, 90, 122
BstNSI RCATGY 4 cut(s) 290, 461, 486, 648
BstV1I GCAGC 2 cut(s) 71, 93
BstXI CCANNNNNNTGG 2 cut(s) 209, 374
BstZI CGGCCG 1 cut(s) 120
BsuI GTATCC 1 cut(s) 593
BsuRI GGCC 3 cut(s) 116, 122, 334
BtsCI GGATG 1 cut(s) 301
Cac8I GCNNGC 3 cut(s) 23, 288, 646
Cfr13I GGNCC 1 cut(s) 199
Csp6I GTAC 1 cut(s) 143
CviAII CATG 8 cut(s) 178, 287, 326, 330, 368, 458, 483, 645
CviQI GTAC 1 cut(s) 143
DdeI CTNAG 4 cut(s) 89, 95, 340, 409
DpnI GATC 3 cut(s) 103, 138, 441
DpnII GATC 3 cut(s) 101, 136, 439
EaeI YGGCCR 1 cut(s) 120
EagI CGGCCG 1 cut(s) 120
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
EclXI CGGCCG 1 cut(s) 120
Eco47I GGWCC 1 cut(s) 199
Eco52I CGGCCG 1 cut(s) 120
EcoNI CCTNNNNNAGG 1 cut(s) 339
EcoT22I ATGCAT 2 cut(s) 331, 650
FaeI CATG 8 cut(s) 181, 290, 329, 333, 371, 461, 486, 648
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FaqI GGGAC 1 cut(s) 567
FatI CATG 8 cut(s) 177, 286, 325, 329, 367, 457, 482, 644
FbaI TGATCA 1 cut(s) 136
Fnu4HI GCNGC 4 cut(s) 19, 82, 85, 123
FokI GGATG 1 cut(s) 288
Fsp4HI GCNGC 4 cut(s) 19, 82, 85, 123
FspBI CTAG 2 cut(s) 56, 146
GluI GCNGC 4 cut(s) 19, 82, 85, 123
HaeIII GGCC 3 cut(s) 116, 122, 334
HapII CCGG 1 cut(s) 586
Hin1II CATG 8 cut(s) 181, 290, 329, 333, 371, 461, 486, 648
HindIII AAGCTT 3 cut(s) 29, 227, 394
HpaII CCGG 1 cut(s) 586
HphI GGTGA 1 cut(s) 16
Hpy166II GTNNAC 1 cut(s) 151
Hpy188I TCNGA 1 cut(s) 640
Hpy188III TCNNGA 3 cut(s) 305, 541, 586
Hpy8I GTNNAC 1 cut(s) 151
HpyAV CCTTC 1 cut(s) 456
HpyCH4III ACNGT 2 cut(s) 238, 581
HpyCH4V TGCA 7 cut(s) 81, 286, 329, 461, 475, 525, 648
HpyF10VI GCNNNNNNNGC 3 cut(s) 15, 90, 122
HpyF3I CTNAG 4 cut(s) 89, 95, 340, 409
Hsp92II CATG 8 cut(s) 181, 290, 329, 333, 371, 461, 486, 648
Kpn2I TCCGGA 1 cut(s) 585
Ksp22I TGATCA 1 cut(s) 136
Kzo9I GATC 3 cut(s) 101, 136, 439
LmnI GCTCC 1 cut(s) 257
Lsp1109I GCAGC 2 cut(s) 71, 93
MaeI CTAG 2 cut(s) 56, 146
MaeIII GTNAC 1 cut(s) 575
MalI GATC 3 cut(s) 103, 138, 441
MboI GATC 3 cut(s) 101, 136, 439
MboII GAAGA 4 cut(s) 203, 233, 314, 434
MfeI CAATTG 1 cut(s) 361
MluCI AATT 7 cut(s) 204, 243, 280, 361, 419, 462, 560
MnlI CCTC 8 cut(s) 98, 104, 127, 259, 262, 345, 537, 637
Mph1103I ATGCAT 2 cut(s) 331, 650
MroI TCCGGA 1 cut(s) 585
MroXI GAANNNNTTC 1 cut(s) 41
MseI TTAA 2 cut(s) 167, 651
MslI CAYNNNNRTG 3 cut(s) 324, 372, 653
MspA1I CMGCKG 1 cut(s) 84
MspI CCGG 1 cut(s) 586
MunI CAATTG 1 cut(s) 361
MwoI GCNNNNNNNGC 3 cut(s) 15, 90, 122
NdeII GATC 3 cut(s) 101, 136, 439
NlaIII CATG 8 cut(s) 181, 290, 329, 333, 371, 461, 486, 648
NlaIV GGNNCC 2 cut(s) 253, 614
NmeAIII GCCGAG 1 cut(s) 98
NsiI ATGCAT 2 cut(s) 331, 650
NspI RCATGY 4 cut(s) 290, 461, 486, 648
NspV TTCGAA 1 cut(s) 502
PaeI GCATGC 2 cut(s) 290, 648
PciI ACATGT 1 cut(s) 482
PdmI GAANNNNTTC 1 cut(s) 41
PkrI GCNGC 4 cut(s) 20, 83, 86, 124
PscI ACATGT 1 cut(s) 482
PshBI ATTAAT 1 cut(s) 651
PspN4I GGNNCC 2 cut(s) 253, 614
PspPI GGNCC 1 cut(s) 199
PvuII CAGCTG 1 cut(s) 84
RsaI GTAC 1 cut(s) 144
RsaNI GTAC 1 cut(s) 143
RseI CAYNNNNRTG 3 cut(s) 324, 372, 653
SaqAI TTAA 2 cut(s) 167, 651
SatI GCNGC 4 cut(s) 19, 82, 85, 123
Sau3AI GATC 3 cut(s) 101, 136, 439
Sau96I GGNCC 1 cut(s) 199
ScaI AGTACT 1 cut(s) 144
SfuI TTCGAA 1 cut(s) 502
SinI GGWCC 1 cut(s) 199
SmiMI CAYNNNNRTG 3 cut(s) 324, 372, 653
SpeI ACTAGT 2 cut(s) 55, 145
SphI GCATGC 2 cut(s) 290, 648
Sse9I AATT 7 cut(s) 204, 243, 280, 361, 419, 462, 560
SsiI CCGC 2 cut(s) 18, 123
SspMI CTAG 2 cut(s) 56, 146
TaaI ACNGT 2 cut(s) 238, 581
TaqI TCGA 1 cut(s) 502
TasI AATT 7 cut(s) 204, 243, 280, 361, 419, 462, 560
TatI WGTACW 1 cut(s) 142
TauI GCSGC 2 cut(s) 21, 125
Tru1I TTAA 2 cut(s) 167, 651
Tru9I TTAA 2 cut(s) 167, 651
TseI GCWGC 2 cut(s) 81, 84
TspDTI ATGAA 5 cut(s) 34, 308, 314, 421, 432
TspGWI ACGGA 1 cut(s) 244
VpaK11BI GGWCC 1 cut(s) 199
VspI ATTAAT 1 cut(s) 651
XagI CCTNNNNNAGG 1 cut(s) 339
XapI RAATTY 1 cut(s) 419
XceI RCATGY 4 cut(s) 290, 461, 486, 648
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 2 cut(s) 56, 146
ZrmI AGTACT 1 cut(s) 144
Zsp2I ATGCAT 2 cut(s) 331, 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.