ADP-ribosylation factor family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G28550 AT2G33870 AT3G15060 AT4G18430 AT5G60860 |
| fragaria_vesca | FvH4_3g08320 FvH4_3g19070 |
| malus_domestica | MD03G1237100.v1.1 MD05G1307500.v1.1 MD10G1286600.v1.1 MD11G1257700.v1.1 MD11G1257800.v1.1 |
| prunus_persica | Prupe.4G055200_v2.0.a1 Prupe.4G172300_v2.0.a1 |
| pyrus_communis | pycom05g28420 pycom11g22750 |
| rosa_chinensis | RchiOBHm_Chr5g0009681 RchiOBHm_Chr5g0031861 |
| rosa_laevigata | RLG00000031679 RLG00000033354 |
| rosa_multiflora | Rmu_sc0006311.1_g000001 Rmu_sc0011639.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00048410 Rroxscaffold_1G00066530 |
| rosa_rugosa | Rorug04G0444700 Rorug05G0128300 |
| rosa_samantha | Rh5AG076300 Rh5AG222400 Rh5BG071500 Rh5BG222700 Rh5CG084000 Rh5CG245900 Rh5DG072000 Rh5DG227600 |
| rosa_wichuraiana | Rw5G007030 Rw5G020280 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 171, 276 |
| AciI | CCGC | 1 cut(s) | 207 |
| AclI | AACGTT | 3 cut(s) | 299, 309, 354 |
| AclWI | GGATC | 1 cut(s) | 557 |
| AcsI | RAATTY | 1 cut(s) | 110 |
| AcyI | GRCGYC | 1 cut(s) | 69 |
| AfaI | GTAC | 1 cut(s) | 556 |
| AflIII | ACRYGT | 1 cut(s) | 447 |
| AgsI | TTSAA | 2 cut(s) | 43, 314 |
| AhlI | ACTAGT | 1 cut(s) | 46 |
| AleI | CACNNNNGTG | 1 cut(s) | 399 |
| AluBI | AGCT | 6 cut(s) | 191, 196, 331, 422, 497, 545 |
| AluI | AGCT | 6 cut(s) | 191, 196, 331, 422, 497, 545 |
| Alw26I | GTCTC | 2 cut(s) | 96, 455 |
| AlwI | GGATC | 1 cut(s) | 557 |
| ApoI | RAATTY | 1 cut(s) | 110 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 454, 486 |
| AsuHPI | GGTGA | 2 cut(s) | 91, 386 |
| AsuII | TTCGAA | 1 cut(s) | 303 |
| BaeGI | GKGCMC | 1 cut(s) | 268 |
| BauI | CACGAG | 1 cut(s) | 235 |
| BccI | CCATC | 3 cut(s) | 143, 312, 545 |
| BceAI | ACGGC | 1 cut(s) | 522 |
| BcoDI | GTCTC | 2 cut(s) | 96, 455 |
| BcuI | ACTAGT | 1 cut(s) | 46 |
| BfaI | CTAG | 3 cut(s) | 47, 272, 423 |
| BfmI | CTRYAG | 2 cut(s) | 10, 247 |
| BlpI | GCTNAGC | 1 cut(s) | 192 |
| BmiI | GGNNCC | 1 cut(s) | 7 |
| BmsI | GCATC | 3 cut(s) | 126, 337, 466 |
| BpmI | CTGGAG | 1 cut(s) | 579 |
| Bpu10I | CCTNAGC | 1 cut(s) | 646 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 192 |
| Bpu14I | TTCGAA | 1 cut(s) | 303 |
| BpuEI | CTTGAG | 1 cut(s) | 308 |
| BsaHI | GRCGYC | 1 cut(s) | 69 |
| Bse1I | ACTGG | 1 cut(s) | 562 |
| BseGI | GGATG | 2 cut(s) | 481, 616 |
| BseMII | CTCAG | 1 cut(s) | 206 |
| BseNI | ACTGG | 1 cut(s) | 562 |
| BseRI | GAGGAG | 1 cut(s) | 267 |
| BseSI | GKGCMC | 1 cut(s) | 268 |
| BsgI | GTGCAG | 1 cut(s) | 423 |
| BsiSI | CCGG | 1 cut(s) | 66 |
| BslFI | GGGAC | 1 cut(s) | 215 |
| BsmAI | GTCTC | 2 cut(s) | 96, 455 |
| BsmFI | GGGAC | 1 cut(s) | 215 |
| Bsp119I | TTCGAA | 1 cut(s) | 303 |
| Bsp1286I | GDGCHC | 1 cut(s) | 268 |
| Bsp143I | GATC | 3 cut(s) | 385, 425, 562 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 192 |
| BspACI | CCGC | 1 cut(s) | 207 |
| BspCNI | CTCAG | 1 cut(s) | 205 |
| BspLI | GGNNCC | 1 cut(s) | 7 |
| BspPI | GGATC | 1 cut(s) | 557 |
| BspT104I | TTCGAA | 1 cut(s) | 303 |
| BsrI | ACTGG | 1 cut(s) | 562 |
| BssMI | GATC | 3 cut(s) | 385, 425, 562 |
| BssNAI | GTATAC | 1 cut(s) | 277 |
| BssNI | GRCGYC | 1 cut(s) | 69 |
| BssSI | CACGAG | 1 cut(s) | 235 |
| Bst1107I | GTATAC | 1 cut(s) | 277 |
| Bst2BI | CACGAG | 1 cut(s) | 235 |
| Bst6I | CTCTTC | 1 cut(s) | 44 |
| BstACI | GRCGYC | 1 cut(s) | 69 |
| BstBI | TTCGAA | 1 cut(s) | 303 |
| BstDEI | CTNAG | 2 cut(s) | 192, 646 |
| BstF5I | GGATG | 2 cut(s) | 481, 616 |
| BstKTI | GATC | 3 cut(s) | 388, 428, 565 |
| BstMAI | GTCTC | 2 cut(s) | 96, 455 |
| BstMBI | GATC | 3 cut(s) | 385, 425, 562 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 263, 328, 476 |
| BstNSI | RCATGY | 1 cut(s) | 451 |
| BstSFI | CTRYAG | 2 cut(s) | 10, 247 |
| BstSLI | GKGCMC | 1 cut(s) | 268 |
| BstX2I | RGATCY | 1 cut(s) | 562 |
| BstYI | RGATCY | 1 cut(s) | 562 |
| BstZ17I | GTATAC | 1 cut(s) | 277 |
| BtsCI | GGATG | 2 cut(s) | 481, 616 |
| BtsI | GCAGTG | 1 cut(s) | 264 |
| BtsIMutI | CAGTG | 1 cut(s) | 264 |
| CseI | GACGC | 1 cut(s) | 58 |
| Csp6I | GTAC | 1 cut(s) | 555 |
| CviAII | CATG | 5 cut(s) | 167, 364, 448, 457, 506 |
| CviQI | GTAC | 1 cut(s) | 555 |
| DdeI | CTNAG | 2 cut(s) | 192, 646 |
| DpnI | GATC | 3 cut(s) | 387, 427, 564 |
| DpnII | GATC | 3 cut(s) | 385, 425, 562 |
| Eam1104I | CTCTTC | 1 cut(s) | 44 |
| EarI | CTCTTC | 1 cut(s) | 44 |
| Eco32I | GATATC | 1 cut(s) | 598 |
| EcoRI | GAATTC | 1 cut(s) | 110 |
| EcoRV | GATATC | 1 cut(s) | 598 |
| FaeI | CATG | 5 cut(s) | 170, 367, 451, 460, 509 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 180, 212, 372, 404 |
| FaqI | GGGAC | 1 cut(s) | 215 |
| FatI | CATG | 5 cut(s) | 166, 363, 447, 456, 505 |
| FblI | GTMKAC | 2 cut(s) | 171, 276 |
| FokI | GGATG | 2 cut(s) | 488, 623 |
| FspBI | CTAG | 3 cut(s) | 47, 272, 423 |
| GsuI | CTGGAG | 1 cut(s) | 579 |
| HapII | CCGG | 1 cut(s) | 66 |
| HgaI | GACGC | 1 cut(s) | 58 |
| Hin1I | GRCGYC | 1 cut(s) | 69 |
| Hin1II | CATG | 5 cut(s) | 170, 367, 451, 460, 509 |
| HincII | GTYRAC | 2 cut(s) | 132, 172 |
| HindII | GTYRAC | 2 cut(s) | 132, 172 |
| HindIII | AAGCTT | 1 cut(s) | 495 |
| HinfI | GANTC | 3 cut(s) | 62, 122, 514 |
| HpaII | CCGG | 1 cut(s) | 66 |
| HphI | GGTGA | 2 cut(s) | 91, 386 |
| Hpy166II | GTNNAC | 3 cut(s) | 132, 172, 277 |
| Hpy188I | TCNGA | 4 cut(s) | 74, 436, 567, 602 |
| Hpy188III | TCNNGA | 6 cut(s) | 52, 215, 235, 335, 511, 548 |
| Hpy8I | GTNNAC | 3 cut(s) | 132, 172, 277 |
| Hpy99I | CGWCG | 4 cut(s) | 23, 26, 74, 176 |
| HpyAV | CCTTC | 1 cut(s) | 407 |
| HpyCH4IV | ACGT | 3 cut(s) | 299, 309, 354 |
| HpyCH4V | TGCA | 2 cut(s) | 242, 404 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 263, 328, 476 |
| HpyF3I | CTNAG | 2 cut(s) | 192, 646 |
| HpySE526I | ACGT | 3 cut(s) | 299, 309, 354 |
| Hsp92I | GRCGYC | 1 cut(s) | 69 |
| Hsp92II | CATG | 5 cut(s) | 170, 367, 451, 460, 509 |
| Kzo9I | GATC | 3 cut(s) | 385, 425, 562 |
| LmnI | GCTCC | 3 cut(s) | 5, 254, 328 |
| LpnPI | CCDG | 6 cut(s) | 79, 115, 195, 543, 621, 633 |
| LweI | GCATC | 3 cut(s) | 126, 337, 466 |
| MaeI | CTAG | 3 cut(s) | 47, 272, 423 |
| MaeII | ACGT | 3 cut(s) | 299, 309, 354 |
| MaeIII | GTNAC | 3 cut(s) | 335, 392, 616 |
| MalI | GATC | 3 cut(s) | 387, 427, 564 |
| MboI | GATC | 3 cut(s) | 385, 425, 562 |
| MboII | GAAGA | 4 cut(s) | 31, 380, 428, 624 |
| MflI | RGATCY | 1 cut(s) | 562 |
| MhlI | GDGCHC | 1 cut(s) | 268 |
| MluCI | AATT | 1 cut(s) | 110 |
| MlyI | GAGTC | 2 cut(s) | 131, 508 |
| MmeI | TCCRAC | 2 cut(s) | 52, 352 |
| MnlI | CCTC | 1 cut(s) | 245 |
| MseI | TTAA | 1 cut(s) | 627 |
| MslI | CAYNNNNRTG | 2 cut(s) | 345, 399 |
| MspA1I | CMGCKG | 1 cut(s) | 209 |
| MspI | CCGG | 1 cut(s) | 66 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 263, 328, 476 |
| NdeII | GATC | 3 cut(s) | 385, 425, 562 |
| NlaIII | CATG | 5 cut(s) | 170, 367, 451, 460, 509 |
| NlaIV | GGNNCC | 1 cut(s) | 7 |
| NmuCI | GTSAC | 2 cut(s) | 335, 392 |
| NspI | RCATGY | 1 cut(s) | 451 |
| NspV | TTCGAA | 1 cut(s) | 303 |
| OliI | CACNNNNGTG | 1 cut(s) | 399 |
| PciI | ACATGT | 1 cut(s) | 447 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 27, 397 |
| PfeI | GAWTC | 1 cut(s) | 62 |
| PleI | GAGTC | 2 cut(s) | 130, 508 |
| PpsI | GAGTC | 2 cut(s) | 130, 508 |
| PscI | ACATGT | 1 cut(s) | 447 |
| Psp1406I | AACGTT | 3 cut(s) | 299, 309, 354 |
| PspN4I | GGNNCC | 1 cut(s) | 7 |
| PsuI | RGATCY | 1 cut(s) | 562 |
| RsaI | GTAC | 1 cut(s) | 556 |
| RsaNI | GTAC | 1 cut(s) | 555 |
| RseI | CAYNNNNRTG | 2 cut(s) | 345, 399 |
| SalI | GTCGAC | 1 cut(s) | 170 |
| SaqAI | TTAA | 1 cut(s) | 627 |
| Sau3AI | GATC | 3 cut(s) | 385, 425, 562 |
| SchI | GAGTC | 2 cut(s) | 131, 508 |
| SduI | GDGCHC | 1 cut(s) | 268 |
| SfaNI | GCATC | 3 cut(s) | 126, 337, 466 |
| SfcI | CTRYAG | 2 cut(s) | 10, 247 |
| SfuI | TTCGAA | 1 cut(s) | 303 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 345, 399 |
| SmlI | CTYRAG | 1 cut(s) | 323 |
| SmoI | CTYRAG | 1 cut(s) | 323 |
| SpeI | ACTAGT | 1 cut(s) | 46 |
| Sse9I | AATT | 1 cut(s) | 110 |
| SsiI | CCGC | 1 cut(s) | 207 |
| SspMI | CTAG | 3 cut(s) | 47, 272, 423 |
| TaiI | ACGT | 3 cut(s) | 302, 312, 357 |
| TaqI | TCGA | 6 cut(s) | 120, 144, 171, 289, 303, 489 |
| TasI | AATT | 1 cut(s) | 110 |
| TfiI | GAWTC | 1 cut(s) | 62 |
| Tru1I | TTAA | 1 cut(s) | 627 |
| Tru9I | TTAA | 1 cut(s) | 627 |
| TscAI | CASTG | 1 cut(s) | 264 |
| TseFI | GTSAC | 2 cut(s) | 335, 392 |
| Tsp45I | GTSAC | 2 cut(s) | 335, 392 |
| TspDTI | ATGAA | 2 cut(s) | 155, 445 |
| TspRI | CASTG | 1 cut(s) | 264 |
| XapI | RAATTY | 1 cut(s) | 110 |
| XceI | RCATGY | 1 cut(s) | 451 |
| XmiI | GTMKAC | 2 cut(s) | 171, 276 |
| XspI | CTAG | 3 cut(s) | 47, 272, 423 |