Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003346

Physical Location & Seq

Genomic Coordinates Reverse (-)

14558927 .. 14562601

Gene Structure 3675 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G29730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGGAAAGCGAAGCAGCAGCGACTGTTCAAGCCACCAGGCCGAGAAGAGCACCTAGGACTCCGGTGACAGCCATTTTGACGGATAAGAGAAGACGGAAACCTAAGAGCAACAACGAGTCTCAGTTACCATTTTTGCTACAGCAGAGTCAAAAGGCCACCGTTGACGACACTTACTCTCAGTGGAAGACTCTTCTTCCCATTCTCTATGATTCGTTTGTTAATCATACCCTCGTCTGGCCCTCTCTCTCTTGCAGATGGGGGCCACAGCTTGAGCAAGCAGGTTCTAAGACTCAACGTCTCTATCTCTCGGAACAAACGAATGGCAGTGTGCCTAATACTTTGGTCATAGCCAATTGCGAAACTGTTAATAGGCAGCTTAATGAAAAGGCACACTCTCCATTTGTGAAGAAGTACAAGACCATCATCCACCCTGGAGAGGTCAACAGAATTAGGGAACTCCCTCAAAATAGCAAGATTGTAGCTACTCACACCGACAGTCCTGATATTCTCATTTGGAACACTGAGACTCAACCAGACCGGTATGCTGTGCTTGGAGCTCCAGATTCTCGTCCAGATTTGTTACTAATTGGGCACCAGGATGATGCTGAATTTGCTCTTGCAATGTGCCCAACCGAACCTTTTGTTCTCTCTGGAGGCAAGGACAAGTCCGTTATTTTGTGGAATATCCAAGACCATATCACAATGGCTGGTTCGGATTCCAAATCCCCTGGATCCAGCTTCAAGCAGACTGGTGAAGGTAGTGATAAAACTGGTGGTCCTTCTGTTGGCCCTCGAGGCATATATAATGGCCACAAAGATACTGTTGAAGACGTGGCATTCTGTCCATCTAGTGCACAAGAATTCTGCAGTGTTGGTGACGATTCTTGCCTTATGCTATGGGACGCAAGAACTGGCACTAGTCCTGCCATGAAGGTTGAGAAGGCACATGATGCTGATCTTCACTGTGTCGATTGGAATCCTCATGACAATAATCTGATCCTGACTGGGTCAGCAGATAACACTGTCCGTGTGTTTGACCGCCGAAACCTTACCTCAAATGGAGTTGGTTCACCTGTTTACAAATTTGAAGGCCACAGAGCTGCTGTTCTTTGTGTTCAGTGGTCTCCTGATAAATCATCTGTTTTTGGGAGTTCTGCAGAAGATGGTCTCTTGAACATATGGGATTGTGATAGGGTTGGCAAGAAGTCTGAGCGTGCAACCAAAACTCCTGATGGGCTTTTCTTCCAGCATGCTGGTCACAGGGACAAAGTGGTCGACTTCCACTGGAGCCTATTGAACCCTTGGACTATTGTCAGTGTTTCTGATAATTGTGAGAGTATCGGTGGAGGTGGTACATTGCAGATATGGCGGATGAGTGACTTGATTTACAGACCGGAAGATGAAGTCCTGACAGAGCTAGAGAAATTCAAGTCACATGTTTTCACATGTACCTCCAAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009892 GO:0009987 GO:0010224 GO:0010468 GO:0010605 GO:0010629 GO:0019222 GO:0031461 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

CAF1C_H4-bd WD40

Protein Analysis

487

Amino Acids

53.99

Weight (kDa)

6.12

Isoelectric Point (pI)

46.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1C_H4-bd	PF12265	56 - 122	1.3e-17	Histone-binding protein RBBP4 or subunit C of CAF1 complex
Beta-prop_TEP1_2nd	PF25047	263 - 406	2e-09	TEP-1 second beta-propeller
Beta-prop_THOC3	PF25174	268 - 308	4.1e-06	THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1	PF24105	268 - 349	3.5e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR5	PF25175	269 - 397	7.5e-20	WDR5 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	269 - 346	2.6e-07	WDR3 first beta-propeller domain
WDR55	PF24796	269 - 398	8.8e-09	WDR55
WD40_CDC20-Fz	PF24807	270 - 398	2.2e-14	CDC20/Fizzy WD40 domain
Beta-prop_EIPR1	PF23609	270 - 345	1.5e-09	EIPR1 beta-propeller
Beta-prop_EML	PF23409	271 - 398	3.6e-06	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_Aladin	PF25460	273 - 398	3.6e-07	Aladin seven-bladed propeller
Beta-prop_EML_2	PF23414	282 - 408	8.2e-11	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st	PF25173	298 - 396	1.1e-10	WDR3 first beta-propeller domain
Beta-prop_EIPR1	PF23609	314 - 400	8.6e-07	EIPR1 beta-propeller
WD40_Prp19	PF24814	314 - 402	7.6e-11	Prp19 WD40 domain
WD40	PF00400	314 - 346	4.2e-06	WD domain, G-beta repeat
Beta-prop_THOC3	PF25174	316 - 403	4.1e-13	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	318 - 398	2.9e-07	WDHD1 first WD40 domain
WD40	PF00400	356 - 395	3.3e-07	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003346)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19520 AT4G29730 AT4G29730 AT4G29730
fragaria_vesca	FvH4_1g07500 FvH4_6g33340 FvH4_6g33340
malus_domestica	MD02G1079600.v1.1 MD09G1193500.v1.1 MD15G1207100.v1.1
prunus_persica	Prupe.3G049900_v2.0.a1 Prupe.7G209600_v2.0.a1 Prupe.7G209600_v2.0.a1
pyrus_communis	pycom02g06340 pycom09g11000 pycom15g18350
rosa_chinensis	RchiOBHm_Chr2g0093391 RchiOBHm_Chr2g0143191
rosa_laevigata	RLG00000016395 RLG00000020012
rosa_multiflora	Rmu_sc0005227.1_g000015 Rmu_sc0032382.1_g000001 Rmu_ssc0000301.1_g000001
rosa_roxburghii	Rroxscaffold_2G00102060 Rroxscaffold_2G00148140
rosa_rugosa	Rorug02G0035100 Rorug02G0379000
rosa_samantha	Rh2AG431800 Rh2BG082700 Rh2BG440400 Rh2CG084700 Rh2CG417700 Rh2DG080400 Rh2DG450600
rosa_wichuraiana	Rw2G006520 Rw2G035280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1271
AbsI	CCTCGAGG	1 cut(s)	792
Acc36I	ACCTGC	1 cut(s)	269
AccB1I	GGYRCC	1 cut(s)	591
AccI	GTMKAC	1 cut(s)	1275
AciI	CCGC	2 cut(s)	1039, 1369
AclWI	GGATC	3 cut(s)	726, 739, 991
AcoI	YGGCCR	1 cut(s)	808
AcsI	RAATTY	4 cut(s)	608, 860, 1082, 1424
AfaI	GTAC	3 cut(s)	413, 1354, 1450
AfiI	CCNNNNNNNGG	3 cut(s)	234, 436, 785
AflIII	ACRYGT	2 cut(s)	1435, 1445
AgeI	ACCGGT	1 cut(s)	537
AgsI	TTSAA	7 cut(s)	29, 742, 827, 1088, 1174, 1297, 1429
AhdI	GACNNNNNGTC	1 cut(s)	294
AhlI	ACTAGT	1 cut(s)	917
AjiI	CACGTC	1 cut(s)	832
AjnI	CCWGG	4 cut(s)	35, 430, 594, 727
AluBI	AGCT	7 cut(s)	268, 376, 482, 557, 738, 1100, 1417
AluI	AGCT	7 cut(s)	268, 376, 482, 557, 738, 1100, 1417
Alw21I	GWGCWC	3 cut(s)	52, 559, 856
Alw26I	GTCTC	5 cut(s)	123, 302, 518, 1128, 1172
Alw44I	GTGCAC	1 cut(s)	852
AlwI	GGATC	3 cut(s)	726, 739, 991
AlwNI	CAGNNNCTG	1 cut(s)	23
Ama87I	CYCGRG	1 cut(s)	792
AoxI	GGCC	7 cut(s)	38, 153, 236, 260, 787, 808, 1090
ApaLI	GTGCAC	1 cut(s)	852
ApeKI	GCWGC	4 cut(s)	14, 17, 373, 1100
ApoI	RAATTY	4 cut(s)	608, 860, 1082, 1424
ArsI	GACNNNNNNTTYG	2 cut(s)	58, 90
AsiGI	ACCGGT	1 cut(s)	537
AspA2I	CCTAGG	1 cut(s)	53
AspS9I	GGNCC	4 cut(s)	237, 260, 776, 788
AsuHPI	GGTGA	4 cut(s)	76, 764, 887, 1062
AvaI	CYCGRG	1 cut(s)	792
AvaII	GGWCC	1 cut(s)	776
AvrII	CCTAGG	1 cut(s)	53
BaeGI	GKGCMC	3 cut(s)	594, 629, 856
BalI	TGGCCA	1 cut(s)	810
BamHI	GGATCC	1 cut(s)	731
BanI	GGYRCC	1 cut(s)	591
BanII	GRGCYC	1 cut(s)	559
BbsI	GAAGAC	3 cut(s)	97, 191, 834
Bbv12I	GWGCWC	3 cut(s)	52, 559, 856
BbvI	GCAGC	4 cut(s)	26, 29, 385, 1087
BccI	CCATC	5 cut(s)	249, 428, 853, 1157, 1226
BciT130I	CCWGG	4 cut(s)	37, 432, 596, 729
BcoDI	GTCTC	5 cut(s)	123, 302, 518, 1128, 1172
BcuI	ACTAGT	1 cut(s)	917
BfaI	CTAG	4 cut(s)	54, 849, 918, 1418
BfmI	CTRYAG	3 cut(s)	137, 865, 1155
BfuAI	ACCTGC	1 cut(s)	269
BglI	GCCNNNNNGGC	1 cut(s)	795
BisI	GCNGC	4 cut(s)	15, 18, 374, 1101
BlnI	CCTAGG	1 cut(s)	53
BlsI	GCNGC	4 cut(s)	16, 19, 375, 1102
Bme1390I	CCNGG	4 cut(s)	37, 432, 596, 729
Bme18I	GGWCC	1 cut(s)	776
BmeRI	GACNNNNNGTC	1 cut(s)	294
BmeT110I	CYCGRG	1 cut(s)	792
BmgBI	CACGTC	1 cut(s)	832
BmgT120I	GGNCC	4 cut(s)	237, 260, 776, 788
BmiI	GGNNCC	4 cut(s)	261, 593, 733, 1289
BmrFI	CCNGG	4 cut(s)	37, 432, 596, 729
BmrI	ACTGGG	1 cut(s)	1014
BmsI	GCATC	2 cut(s)	592, 940
BmuI	ACTGGG	1 cut(s)	1014
BoxI	GACNNNNGTC	1 cut(s)	1310
BpiI	GAAGAC	3 cut(s)	97, 191, 834
BpmI	CTGGAG	4 cut(s)	453, 543, 672, 1306
BpuEI	CTTGAG	1 cut(s)	290
BsaBI	GATNNNNATC	2 cut(s)	954, 975
BsaI	GGTCTC	2 cut(s)	1128, 1172
BsaJI	CCNNGG	4 cut(s)	53, 430, 727, 1301
BsaWI	WCCGGW	3 cut(s)	61, 537, 1393
BsaXI	ACNNNNNCTCC	2 cut(s)	1210, 1240
Bsc4I	CCNNNNNNNGG	3 cut(s)	234, 436, 785
Bse118I	RCCGGY	1 cut(s)	537
Bse1I	ACTGG	5 cut(s)	754, 775, 916, 1009, 1289
Bse3DI	GCAATG	2 cut(s)	627, 1355
Bse8I	GATNNNNATC	2 cut(s)	954, 975
BseBI	CCWGG	4 cut(s)	37, 432, 596, 729
BseDI	CCNNGG	4 cut(s)	53, 430, 727, 1301
BseGI	GGATG	3 cut(s)	423, 604, 1377
BseJI	GATNNNNATC	2 cut(s)	954, 975
BseLI	CCNNNNNNNGG	3 cut(s)	234, 436, 785
BseMI	GCAATG	2 cut(s)	627, 1355
BseMII	CTCAG	4 cut(s)	134, 191, 513, 1200
BseNI	ACTGG	5 cut(s)	754, 775, 916, 1009, 1289
BseSI	GKGCMC	3 cut(s)	594, 629, 856
BseXI	GCAGC	4 cut(s)	26, 29, 385, 1087
BshFI	GGCC	7 cut(s)	40, 155, 238, 262, 789, 810, 1092
BshNI	GGYRCC	1 cut(s)	591
BshTI	ACCGGT	1 cut(s)	537
BsiHKAI	GWGCWC	3 cut(s)	52, 559, 856
BsiHKCI	CYCGRG	1 cut(s)	792
BsiSI	CCGG	3 cut(s)	62, 538, 1394
BslFI	GGGAC	2 cut(s)	914, 1277
BslI	CCNNNNNNNGG	3 cut(s)	234, 436, 785
BsmAI	GTCTC	5 cut(s)	123, 302, 518, 1128, 1172
BsmBI	CGTCTC	1 cut(s)	302
BsmFI	GGGAC	2 cut(s)	914, 1277
BsmI	GAATGC	1 cut(s)	836
BsnI	GGCC	7 cut(s)	40, 155, 238, 262, 789, 810, 1092
Bso31I	GGTCTC	2 cut(s)	1128, 1172
BsoBI	CYCGRG	1 cut(s)	792
Bsp1286I	GDGCHC	5 cut(s)	52, 559, 594, 629, 856
Bsp143I	GATC	3 cut(s)	731, 955, 996
BspACI	CCGC	2 cut(s)	1039, 1369
BspANI	GGCC	7 cut(s)	40, 155, 238, 262, 789, 810, 1092
BspCNI	CTCAG	4 cut(s)	133, 190, 514, 1201
BspHI	TCATGA	1 cut(s)	982
BspLI	GGNNCC	4 cut(s)	261, 593, 733, 1289
BspMAI	CTGCAG	2 cut(s)	869, 1159
BspMI	ACCTGC	1 cut(s)	269
BspPI	GGATC	3 cut(s)	726, 739, 991
BspQI	GCTCTTC	1 cut(s)	40
BspT107I	GGYRCC	1 cut(s)	591
BspTNI	GGTCTC	2 cut(s)	1128, 1172
BsrDI	GCAATG	2 cut(s)	627, 1355
BsrFI	RCCGGY	1 cut(s)	537
BsrI	ACTGG	5 cut(s)	754, 775, 916, 1009, 1289
BssAI	RCCGGY	1 cut(s)	537
BssECI	CCNNGG	4 cut(s)	53, 430, 727, 1301
BssMI	GATC	3 cut(s)	731, 955, 996
BssT1I	CCWWGG	2 cut(s)	53, 1301
Bst2UI	CCWGG	4 cut(s)	37, 432, 596, 729
Bst4CI	ACNGT	7 cut(s)	25, 160, 364, 497, 823, 965, 1024
Bst6I	CTCTTC	2 cut(s)	40, 195
BstAPI	GCANNNNNTGC	1 cut(s)	950
BstC8I	GCNNGC	3 cut(s)	276, 1215, 1251
BstDEI	CTNAG	6 cut(s)	102, 120, 177, 285, 522, 1209
BstF5I	GGATG	3 cut(s)	423, 604, 1377
BstKTI	GATC	3 cut(s)	734, 958, 999
BstMAI	GTCTC	5 cut(s)	123, 302, 518, 1128, 1172
BstMBI	GATC	3 cut(s)	731, 955, 996
BstMWI	GCNNNNNNNGC	4 cut(s)	611, 795, 950, 1366
BstNI	CCWGG	4 cut(s)	37, 432, 596, 729
BstNSI	RCATGY	3 cut(s)	1253, 1439, 1449
BstPAI	GACNNNNGTC	1 cut(s)	1310
BstSCI	CCNGG	4 cut(s)	35, 430, 594, 727
BstSFI	CTRYAG	3 cut(s)	137, 865, 1155
BstSLI	GKGCMC	3 cut(s)	594, 629, 856
BstV1I	GCAGC	4 cut(s)	26, 29, 385, 1087
BstV2I	GAAGAC	3 cut(s)	97, 191, 834
BstX2I	RGATCY	1 cut(s)	731
BstXI	CCANNNNNNTGG	1 cut(s)	1253
BstYI	RGATCY	1 cut(s)	731
BsuRI	GGCC	7 cut(s)	40, 155, 238, 262, 789, 810, 1092
BtrI	CACGTC	1 cut(s)	832
BtsCI	GGATG	3 cut(s)	423, 604, 1377
BtsI	GCAGTG	2 cut(s)	331, 874
BtsIMutI	CAGTG	9 cut(s)	185, 331, 519, 874, 961, 1020, 1124, 1282, 1321
BveI	ACCTGC	1 cut(s)	269
Cac8I	GCNNGC	3 cut(s)	276, 1215, 1251
CaiI	CAGNNNCTG	1 cut(s)	23
CciI	TCATGA	1 cut(s)	982
Cfr10I	RCCGGY	1 cut(s)	537
Cfr13I	GGNCC	4 cut(s)	237, 260, 776, 788
CseI	GACGC	1 cut(s)	911
Csp6I	GTAC	3 cut(s)	412, 1353, 1449
CspAI	ACCGGT	1 cut(s)	537
CviAII	CATG	6 cut(s)	928, 947, 983, 1250, 1436, 1446
CviQI	GTAC	3 cut(s)	412, 1353, 1449
DdeI	CTNAG	6 cut(s)	102, 120, 177, 285, 522, 1209
DpnI	GATC	3 cut(s)	733, 957, 998
DpnII	GATC	3 cut(s)	731, 955, 996
DrdI	GACNNNNNNGTC	1 cut(s)	1271
DriI	GACNNNNNGTC	1 cut(s)	294
DseDI	GACNNNNNNGTC	1 cut(s)	1271
EaeI	YGGCCR	1 cut(s)	808
Eam1104I	CTCTTC	2 cut(s)	40, 195
Eam1105I	GACNNNNNGTC	1 cut(s)	294
EarI	CTCTTC	2 cut(s)	40, 195
EciI	GGCGGA	1 cut(s)	1384
Ecl136II	GAGCTC	1 cut(s)	557
Eco130I	CCWWGG	2 cut(s)	53, 1301
Eco24I	GRGCYC	1 cut(s)	559
Eco31I	GGTCTC	2 cut(s)	1128, 1172
Eco47I	GGWCC	1 cut(s)	776
Eco53kI	GAGCTC	1 cut(s)	557
Eco88I	CYCGRG	1 cut(s)	792
EcoICRI	GAGCTC	1 cut(s)	557
EcoRI	GAATTC	1 cut(s)	860
EcoRII	CCWGG	4 cut(s)	35, 430, 594, 727
EcoT14I	CCWWGG	2 cut(s)	53, 1301
EcoT38I	GRGCYC	1 cut(s)	559
ErhI	CCWWGG	2 cut(s)	53, 1301
Esp3I	CGTCTC	1 cut(s)	302
FaeI	CATG	6 cut(s)	931, 950, 986, 1253, 1439, 1449
FaqI	GGGAC	2 cut(s)	914, 1277
FatI	CATG	6 cut(s)	927, 946, 982, 1249, 1435, 1445
FauNDI	CATATG	1 cut(s)	1178
FblI	GTMKAC	1 cut(s)	1275
Fnu4HI	GCNGC	4 cut(s)	15, 18, 374, 1101
FokI	GGATG	3 cut(s)	410, 611, 1384
FriOI	GRGCYC	1 cut(s)	559
Fsp4HI	GCNGC	4 cut(s)	15, 18, 374, 1101
FspBI	CTAG	4 cut(s)	54, 849, 918, 1418
GluI	GCNGC	4 cut(s)	15, 18, 374, 1101
GsuI	CTGGAG	4 cut(s)	453, 543, 672, 1306
HaeIII	GGCC	7 cut(s)	40, 155, 238, 262, 789, 810, 1092
HapII	CCGG	3 cut(s)	62, 538, 1394
HgaI	GACGC	1 cut(s)	911
Hin1II	CATG	6 cut(s)	931, 950, 986, 1253, 1439, 1449
HincII	GTYRAC	3 cut(s)	163, 442, 1276
HindII	GTYRAC	3 cut(s)	163, 442, 1276
HpaII	CCGG	3 cut(s)	62, 538, 1394
HphI	GGTGA	4 cut(s)	76, 764, 887, 1062
Hpy166II	GTNNAC	6 cut(s)	163, 442, 854, 1070, 1078, 1276
Hpy188I	TCNGA	5 cut(s)	310, 715, 996, 1210, 1324
Hpy8I	GTNNAC	6 cut(s)	163, 442, 854, 1070, 1078, 1276
HpyAV	CCTTC	5 cut(s)	749, 789, 925, 934, 1082
HpyCH4III	ACNGT	7 cut(s)	25, 160, 364, 497, 823, 965, 1024
HpyCH4IV	ACGT	2 cut(s)	295, 831
HpyCH4V	TGCA	7 cut(s)	252, 620, 854, 867, 1157, 1217, 1360
HpyF10VI	GCNNNNNNNGC	4 cut(s)	611, 795, 950, 1366
HpyF3I	CTNAG	6 cut(s)	102, 120, 177, 285, 522, 1209
HpySE526I	ACGT	2 cut(s)	295, 831
Hsp92II	CATG	6 cut(s)	931, 950, 986, 1253, 1439, 1449
Kzo9I	GATC	3 cut(s)	731, 955, 996
LguI	GCTCTTC	1 cut(s)	40
LmnI	GCTCC	3 cut(s)	554, 562, 1287
Lsp1109I	GCAGC	4 cut(s)	26, 29, 385, 1087
LweI	GCATC	2 cut(s)	592, 940
MaeI	CTAG	4 cut(s)	54, 849, 918, 1418
MaeII	ACGT	2 cut(s)	295, 831
MaeIII	GTNAC	7 cut(s)	64, 123, 579, 875, 1256, 1376, 1431
MalI	GATC	3 cut(s)	733, 957, 998
MboI	GATC	3 cut(s)	731, 955, 996
MfeI	CAATTG	1 cut(s)	352
MflI	RGATCY	1 cut(s)	731
MhlI	GDGCHC	5 cut(s)	52, 559, 594, 629, 856
MlsI	TGGCCA	1 cut(s)	810
MluCI	AATT	8 cut(s)	352, 447, 585, 608, 860, 1082, 1327, 1424
MluNI	TGGCCA	1 cut(s)	810
MlyI	GAGTC	6 cut(s)	52, 125, 154, 181, 283, 520
Mox20I	TGGCCA	1 cut(s)	810
MscI	TGGCCA	1 cut(s)	810
MseI	TTAA	3 cut(s)	219, 366, 378
MslI	CAYNNNNRTG	1 cut(s)	597
Msp20I	TGGCCA	1 cut(s)	810
MspI	CCGG	3 cut(s)	62, 538, 1394
MspR9I	CCNGG	4 cut(s)	37, 432, 596, 729
MunI	CAATTG	1 cut(s)	352
Mva1269I	GAATGC	1 cut(s)	836
MvaI	CCWGG	4 cut(s)	37, 432, 596, 729
MwoI	GCNNNNNNNGC	4 cut(s)	611, 795, 950, 1366
NdeI	CATATG	1 cut(s)	1178
NdeII	GATC	3 cut(s)	731, 955, 996
NlaIII	CATG	6 cut(s)	931, 950, 986, 1253, 1439, 1449
NlaIV	GGNNCC	4 cut(s)	261, 593, 733, 1289
NmeAIII	GCCGAG	1 cut(s)	66
NmuCI	GTSAC	5 cut(s)	64, 875, 1256, 1376, 1431
NspI	RCATGY	3 cut(s)	1253, 1439, 1449
PaeI	GCATGC	1 cut(s)	1253
PaeR7I	CTCGAG	1 cut(s)	792
PagI	TCATGA	1 cut(s)	982
PciI	ACATGT	2 cut(s)	1435, 1445
PciSI	GCTCTTC	1 cut(s)	40
PcsI	WCGNNNNNNNCGW	1 cut(s)	314
PctI	GAATGC	1 cut(s)	836
PfeI	GAWTC	5 cut(s)	209, 563, 716, 881, 976
PflFI	GACNNNGTC	1 cut(s)	1006
PinAI	ACCGGT	1 cut(s)	537
PkrI	GCNGC	4 cut(s)	16, 19, 375, 1102
PleI	GAGTC	6 cut(s)	52, 124, 153, 181, 283, 520
PpsI	GAGTC	6 cut(s)	52, 124, 153, 181, 283, 520
PscI	ACATGT	2 cut(s)	1435, 1445
PshAI	GACNNNNGTC	1 cut(s)	1310
Psp124BI	GAGCTC	1 cut(s)	559
Psp6I	CCWGG	4 cut(s)	35, 430, 594, 727
PspGI	CCWGG	4 cut(s)	35, 430, 594, 727
PspN4I	GGNNCC	4 cut(s)	261, 593, 733, 1289
PspPI	GGNCC	4 cut(s)	237, 260, 776, 788
PspXI	VCTCGAGB	1 cut(s)	792
PstI	CTGCAG	2 cut(s)	869, 1159
PstNI	CAGNNNCTG	1 cut(s)	23
PsuI	RGATCY	1 cut(s)	731
PsyI	GACNNNGTC	1 cut(s)	1006
RsaI	GTAC	3 cut(s)	413, 1354, 1450
RsaNI	GTAC	3 cut(s)	412, 1353, 1449
RseI	CAYNNNNRTG	1 cut(s)	597
SacI	GAGCTC	1 cut(s)	559
SalI	GTCGAC	1 cut(s)	1274
SapI	GCTCTTC	1 cut(s)	40
SaqAI	TTAA	3 cut(s)	219, 366, 378
SatI	GCNGC	4 cut(s)	15, 18, 374, 1101
Sau3AI	GATC	3 cut(s)	731, 955, 996
Sau96I	GGNCC	4 cut(s)	237, 260, 776, 788
SchI	GAGTC	6 cut(s)	52, 125, 154, 181, 283, 520
ScrFI	CCNGG	4 cut(s)	37, 432, 596, 729
SduI	GDGCHC	5 cut(s)	52, 559, 594, 629, 856
SfaNI	GCATC	2 cut(s)	592, 940
SfcI	CTRYAG	3 cut(s)	137, 865, 1155
Sfr274I	CTCGAG	1 cut(s)	792
SinI	GGWCC	1 cut(s)	776
SlaI	CTCGAG	1 cut(s)	792
SmiMI	CAYNNNNRTG	1 cut(s)	597
SmlI	CTYRAG	2 cut(s)	269, 792
SmoI	CTYRAG	2 cut(s)	269, 792
SpeI	ACTAGT	1 cut(s)	917
SphI	GCATGC	1 cut(s)	1253
Sse9I	AATT	8 cut(s)	352, 447, 585, 608, 860, 1082, 1327, 1424
SsiI	CCGC	2 cut(s)	1039, 1369
SspMI	CTAG	4 cut(s)	54, 849, 918, 1418
SstI	GAGCTC	1 cut(s)	559
StyD4I	CCNGG	4 cut(s)	35, 430, 594, 727
StyI	CCWWGG	2 cut(s)	53, 1301
TaaI	ACNGT	7 cut(s)	25, 160, 364, 497, 823, 965, 1024
TaiI	ACGT	2 cut(s)	298, 834
TaqI	TCGA	3 cut(s)	793, 969, 1275
TasI	AATT	8 cut(s)	352, 447, 585, 608, 860, 1082, 1327, 1424
TatI	WGTACW	1 cut(s)	411
TfiI	GAWTC	5 cut(s)	209, 563, 716, 881, 976
Tru1I	TTAA	3 cut(s)	219, 366, 378
Tru9I	TTAA	3 cut(s)	219, 366, 378
TscAI	CASTG	9 cut(s)	185, 331, 526, 874, 968, 1027, 1124, 1289, 1321
TseFI	GTSAC	5 cut(s)	64, 875, 1256, 1376, 1431
TseI	GCWGC	4 cut(s)	14, 17, 373, 1100
Tsp45I	GTSAC	5 cut(s)	64, 875, 1256, 1376, 1431
TspDTI	ATGAA	3 cut(s)	396, 944, 1416
TspGWI	ACGGA	4 cut(s)	95, 109, 658, 1016
TspRI	CASTG	9 cut(s)	185, 331, 526, 874, 968, 1027, 1124, 1289, 1321
Tth111I	GACNNNGTC	1 cut(s)	1006
VneI	GTGCAC	1 cut(s)	852
VpaK11BI	GGWCC	1 cut(s)	776
XapI	RAATTY	4 cut(s)	608, 860, 1082, 1424
XceI	RCATGY	3 cut(s)	1253, 1439, 1449
XhoI	CTCGAG	1 cut(s)	792
XmaJI	CCTAGG	1 cut(s)	53
XmiI	GTMKAC	1 cut(s)	1275
XspI	CTAG	4 cut(s)	54, 849, 918, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.