MD09G1193500.v1.1

WD-40 repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0003346
Physical Location & Seq
Forward (+)
17349011 .. 17354982
5972 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1193500.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGAAAGGGAAAGCTACGGAGGCGTCGGTGAACGATCGATACACGCAGTGGAAGTCGCTGGTGCCGGTGCTCTACGACTGGCTCGTCAATCACAACCTTGTTTGGCCTTCTCTCTCTTGCAGATGGGGACCGCAGCTGGAGCAAGCCACTTACAAGAGTCGTCAGCGCCTTTTTCTTTCGGAACAGACTGATGGCAGTGTTCCAAATACACTTGTCATTGCAAACTGTGAAGTTGTCAAACCCAGGGTTGCAGCTGCCGAGCACATATCACAGTTCAATGAAGAAGCACGCTCTCCCTTTGTGAAAAAGTATAAAACTATTATACATCCCGGTGAGGTGAACAGAATCAGGGAACTCCCTCAGAATAGTAAGATAGTGGCGACACACACTGACAGTCCTGATGTTCTCATTTGGGATATTGAGGCTCAACCTAATCGCCATGCTGTTCTGGGAGCTTCAGATTCTCGTCCAGATCTGCTATTGACAGGGCATCAAGATAATGCTGAATTTGCTCTTGCCATGTGCCCATCTGAACCCTTTGTGCTCTCTGGAGGGAAGGATAAATCAGTGATTTTGTGGAGTATTCATGATCATATCTCATCTTTAGCATCAGAACCAGGATCTGGAGGTGGCAGTGCTAAACATTCTTCTAAGACTGGTGGGAGTAACGATAAACTCAGAGACAGCCCTTCTGTTGAGCCACGGGGTGTCTATAAAGGGCATGAGGATACTGTTGAGGATGTGCAGTTCTGCCCATCTAGTTCGCAGGAGTTCTGTAGTGTAGGCGATGATTCTTGCCTCATACTATGGGATACAAGAGCTGGATCTAGTTCAGCTGTCAAGGTTGAGAAAGCTCATGATGCTGACCTTCATTGTGTTGATTGGAATCCACATGACGTCAATCTCATACTTACAGGGTCCGCTGATAATACTATTCGCTTGTTTGACCGCCGATATCTCACTTCTGGAGGAGTTGGATCACCCGTTCATACATTTGAGGGCCACAATGCAGCTGTCCTCTGTATACAGTGGTCTCCTCACAAGGCATCTGTTTTTGGAAGCTCTGCCGAGGATGGCTTACTAAACATCTGGGATCATGAAAAGGTTGGCAAGAATGGATCAAAGCCGTCAAATGCTCCTCCAGGATTGTTCTTTCGACATGCTGGGCATAGGGACAAGGTTGTTGACTTTCATTGGAATGCGTCTGATCCGTGGACGATATCTAGCGTCTCTGATGATTGCGGAAGTACCGGAGGTGGTGGTACCCTCCAGATATGGCGGATGATTGATTTGATTTACAGGCCCGAGGAAGAGGTCCTCGCGGAGCTGGATACGTTCAAATCGCACCTAACAACGTGCCAGGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04218 map04218
Pfam Domains
Protein Families
CAF1C_H4-bd WD40

Protein Analysis

456

Amino Acids

49.96

Weight (kDa)

5.75

Isoelectric Point (pI)

46.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CAF1C_H4-bd PF12265 12 - 79 9.3e-20 Histone-binding protein RBBP4 or subunit C of CAF1 complex
Beta-prop_WDR5 PF25175 235 - 368 3e-19 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 237 - 279 2.3e-06 THOC3 beta-propeller domain
Beta-prop_CAF1B_HIR1 PF24105 237 - 317 9e-06 CAF1B/HIR1 beta-propeller domain
Beta-prop_WDR3_1st PF25173 239 - 316 4.8e-06 WDR3 first beta-propeller domain
Beta-prop_EIPR1 PF23609 239 - 315 5.8e-10 EIPR1 beta-propeller
WDR55 PF24796 239 - 367 4.5e-07 WDR55
WD40_CDC20-Fz PF24807 241 - 367 4.7e-14 CDC20/Fizzy WD40 domain
Beta-prop_EML_2 PF23414 254 - 372 5e-08 Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_WDR3_1st PF25173 263 - 413 2.9e-11 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 284 - 413 2.1e-10 Prp19 WD40 domain
Beta-prop_EIPR1 PF23609 285 - 366 2.7e-06 EIPR1 beta-propeller
Beta-prop_THOC3 PF25174 286 - 368 3.9e-11 THOC3 beta-propeller domain
WD40_WDHD1_1st PF24817 289 - 368 1.7e-06 WDHD1 first WD40 domain
WD40 PF00400 326 - 365 4.3e-07 WD domain, G-beta repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 83
AatII GACGTC 1 cut(s) 900
Acc65I GGTACC 1 cut(s) 1262
AccB1I GGYRCC 2 cut(s) 61, 1262
AccB7I CCANNNNNTGG 1 cut(s) 623
AccI GTMKAC 1 cut(s) 1024
AccII CGCG 1 cut(s) 1322
AciI CCGC 6 cut(s) 131, 921, 949, 1242, 1279, 1322
AclWI GGATC 6 cut(s) 628, 832, 985, 1101, 1126, 1202
AcsI RAATTY 1 cut(s) 506
AcuI CTGAAG 1 cut(s) 441
AcyI GRCGYC 2 cut(s) 23, 897
AdeI CACNNNGTG 2 cut(s) 48, 707
AfaI GTAC 2 cut(s) 1249, 1264
AfiI CCNNNNNNNGG 1 cut(s) 623
AgsI TTSAA 2 cut(s) 277, 1339
AjnI CCWGG 4 cut(s) 242, 616, 1141, 1359
AloI GAACNNNNNNTCC 4 cut(s) 731, 763, 969, 1001
Alw21I GWGCWC 3 cut(s) 72, 264, 546
Alw26I GTCTC 3 cut(s) 675, 1038, 1234
AlwI GGATC 6 cut(s) 628, 832, 985, 1101, 1126, 1202
AlwNI CAGNNNCTG 1 cut(s) 623
Ama87I CYCGRG 1 cut(s) 1304
AoxI GGCC 3 cut(s) 104, 1000, 1301
ApeKI GCWGC 4 cut(s) 133, 251, 254, 1010
ApoI RAATTY 1 cut(s) 506
Asp718I GGTACC 1 cut(s) 1262
AspLEI GCGC 1 cut(s) 168
AspS9I GGNCC 5 cut(s) 128, 918, 1000, 1302, 1315
AsuC2I CCSGG 1 cut(s) 330
AsuHPI GGTGA 4 cut(s) 40, 344, 349, 972
AvaI CYCGRG 1 cut(s) 1304
AvaII GGWCC 3 cut(s) 128, 918, 1315
BaeGI GKGCMC 1 cut(s) 527
BanI GGYRCC 2 cut(s) 61, 1262
Bbv12I GWGCWC 3 cut(s) 72, 264, 546
BbvI GCAGC 4 cut(s) 145, 241, 263, 1022
BccI CCATC 5 cut(s) 117, 185, 535, 763, 1067
BceAI ACGGC 1 cut(s) 1111
BciT130I CCWGG 4 cut(s) 244, 618, 1143, 1361
BciVI GTATCC 3 cut(s) 721, 805, 1324
BclI TGATCA 1 cut(s) 589
BcnI CCSGG 1 cut(s) 330
BcoDI GTCTC 3 cut(s) 675, 1038, 1234
BfaI CTAG 3 cut(s) 759, 828, 1224
BfmI CTRYAG 1 cut(s) 775
BfoI RGCGCY 1 cut(s) 169
BfuI GTATCC 3 cut(s) 721, 805, 1324
BglII AGATCT 1 cut(s) 472
BisI GCNGC 4 cut(s) 134, 252, 255, 1011
BlsI GCNGC 4 cut(s) 135, 253, 256, 1012
Bme1390I CCNGG 5 cut(s) 244, 330, 618, 1143, 1361
Bme18I GGWCC 3 cut(s) 128, 918, 1315
BmeT110I CYCGRG 1 cut(s) 1304
BmgT120I GGNCC 5 cut(s) 128, 918, 1000, 1302, 1315
BmiI GGNNCC 4 cut(s) 63, 129, 919, 1264
BmrFI CCNGG 5 cut(s) 244, 330, 618, 1143, 1361
BmsI GCATC 4 cut(s) 499, 617, 850, 1055
BpmI CTGGAG 6 cut(s) 158, 570, 645, 987, 1125, 1253
BpuMI CCSGG 1 cut(s) 330
Bsa29I ATCGAT 1 cut(s) 37
BsaBI GATNNNNATC 1 cut(s) 885
BsaHI GRCGYC 2 cut(s) 23, 897
BsaI GGTCTC 1 cut(s) 1038
BsaJI CCNNGG 6 cut(s) 242, 243, 701, 1068, 1211, 1305
BsaWI WCCGGW 1 cut(s) 1250
Bsc4I CCNNNNNNNGG 1 cut(s) 623
Bse118I RCCGGY 1 cut(s) 64
Bse1I ACTGG 2 cut(s) 83, 661
Bse3DI GCAATG 1 cut(s) 216
Bse8I GATNNNNATC 1 cut(s) 885
BseBI CCWGG 4 cut(s) 244, 618, 1143, 1361
BseCI ATCGAT 1 cut(s) 37
BseDI CCNNGG 6 cut(s) 242, 243, 701, 1068, 1211, 1305
BseGI GGATG 4 cut(s) 325, 745, 1078, 1287
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 1 cut(s) 623
BseMI GCAATG 1 cut(s) 216
BseMII CTCAG 2 cut(s) 374, 691
BseNI ACTGG 2 cut(s) 83, 661
BseRI GAGGAG 3 cut(s) 984, 1026, 1128
BseSI GKGCMC 1 cut(s) 527
BseXI GCAGC 4 cut(s) 145, 241, 263, 1022
BseYI CCCAGC 1 cut(s) 1163
BsgI GTGCAG 1 cut(s) 764
Bsh1236I CGCG 1 cut(s) 1322
Bsh1285I CGRYCG 1 cut(s) 37
BshFI GGCC 3 cut(s) 106, 1002, 1303
BshNI GGYRCC 2 cut(s) 61, 1262
BshVI ATCGAT 1 cut(s) 37
BsiEI CGRYCG 1 cut(s) 37
BsiHKAI GWGCWC 3 cut(s) 72, 264, 546
BsiHKCI CYCGRG 1 cut(s) 1304
BsiSI CCGG 3 cut(s) 65, 330, 1251
BslFI GGGAC 2 cut(s) 141, 1187
BslI CCNNNNNNNGG 1 cut(s) 623
BsmAI GTCTC 3 cut(s) 675, 1038, 1234
BsmBI CGTCTC 1 cut(s) 1234
BsmFI GGGAC 2 cut(s) 141, 1187
BsmI GAATGC 1 cut(s) 1204
BsnI GGCC 3 cut(s) 106, 1002, 1303
Bso31I GGTCTC 1 cut(s) 1038
BsoBI CYCGRG 1 cut(s) 1304
Bsp1286I GDGCHC 4 cut(s) 72, 264, 527, 546
Bsp143I GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
BspACI CCGC 6 cut(s) 131, 921, 949, 1242, 1279, 1322
BspANI GGCC 3 cut(s) 106, 1002, 1303
BspCNI CTCAG 2 cut(s) 373, 690
BspDI ATCGAT 1 cut(s) 37
BspFNI CGCG 1 cut(s) 1322
BspHI TCATGA 3 cut(s) 586, 856, 1096
BspLI GGNNCC 4 cut(s) 63, 129, 919, 1264
BspPI GGATC 6 cut(s) 628, 832, 985, 1101, 1126, 1202
BspT107I GGYRCC 2 cut(s) 61, 1262
BspTNI GGTCTC 1 cut(s) 1038
BsrDI GCAATG 1 cut(s) 216
BsrFI RCCGGY 1 cut(s) 64
BsrI ACTGG 2 cut(s) 83, 661
BssAI RCCGGY 1 cut(s) 64
BssECI CCNNGG 6 cut(s) 242, 243, 701, 1068, 1211, 1305
BssMI GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
BssNAI GTATAC 1 cut(s) 1025
BssNI GRCGYC 2 cut(s) 23, 897
Bst1107I GTATAC 1 cut(s) 1025
Bst2UI CCWGG 4 cut(s) 244, 618, 1143, 1361
Bst4CI ACNGT 5 cut(s) 227, 273, 395, 733, 1029
Bst6I CTCTTC 1 cut(s) 1305
BstACI GRCGYC 2 cut(s) 23, 897
BstC8I GCNNGC 2 cut(s) 144, 289
BstDEI CTNAG 3 cut(s) 360, 651, 677
BstDSI CCRYGG 2 cut(s) 701, 1211
BstF5I GGATG 4 cut(s) 325, 745, 1078, 1287
BstFNI CGCG 1 cut(s) 1322
BstH2I RGCGCY 1 cut(s) 169
BstHHI GCGC 1 cut(s) 168
BstKTI GATC 9 cut(s) 37, 475, 592, 623, 827, 980, 1096, 1121, 1210
BstMAI GTCTC 3 cut(s) 675, 1038, 1234
BstMBI GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
BstMCI CGRYCG 1 cut(s) 37
BstMWI GCNNNNNNNGC 4 cut(s) 20, 139, 509, 860
BstNI CCWGG 4 cut(s) 244, 618, 1143, 1361
BstNSI RCATGY 1 cut(s) 1163
BstSCI CCNGG 5 cut(s) 242, 328, 616, 1141, 1359
BstSFI CTRYAG 1 cut(s) 775
BstSLI GKGCMC 1 cut(s) 527
BstUI CGCG 1 cut(s) 1322
BstV1I GCAGC 4 cut(s) 145, 241, 263, 1022
BstX2I RGATCY 3 cut(s) 472, 620, 824
BstYI RGATCY 3 cut(s) 472, 620, 824
BstZ17I GTATAC 1 cut(s) 1025
Bsu15I ATCGAT 1 cut(s) 37
BsuI GTATCC 3 cut(s) 721, 805, 1324
BsuRI GGCC 3 cut(s) 106, 1002, 1303
BsuTUI ATCGAT 1 cut(s) 37
BtgI CCRYGG 2 cut(s) 701, 1211
BtgZI GCGATG 1 cut(s) 801
BtsCI GGATG 4 cut(s) 325, 745, 1078, 1287
BtsI GCAGTG 3 cut(s) 53, 202, 640
BtsIMutI CAGTG 6 cut(s) 53, 202, 387, 573, 640, 1034
Cac8I GCNNGC 2 cut(s) 144, 289
CaiI CAGNNNCTG 1 cut(s) 623
CciI TCATGA 3 cut(s) 586, 856, 1096
CfoI GCGC 1 cut(s) 168
Cfr10I RCCGGY 1 cut(s) 64
Cfr13I GGNCC 5 cut(s) 128, 918, 1000, 1302, 1315
ClaI ATCGAT 1 cut(s) 37
CseI GACGC 3 cut(s) 12, 1191, 1216
Csp6I GTAC 2 cut(s) 1248, 1263
CviAII CATG 8 cut(s) 440, 520, 587, 722, 857, 893, 1097, 1160
CviQI GTAC 2 cut(s) 1248, 1263
DdeI CTNAG 3 cut(s) 360, 651, 677
DpnI GATC 9 cut(s) 36, 474, 591, 622, 826, 979, 1095, 1120, 1209
DpnII GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
DraIII CACNNNGTG 2 cut(s) 48, 707
DrdI GACNNNNNNGTC 1 cut(s) 83
DseDI GACNNNNNNGTC 1 cut(s) 83
Eam1104I CTCTTC 1 cut(s) 1305
EarI CTCTTC 1 cut(s) 1305
EciI GGCGGA 1 cut(s) 1294
Eco31I GGTCTC 1 cut(s) 1038
Eco32I GATATC 2 cut(s) 956, 1221
Eco47I GGWCC 3 cut(s) 128, 918, 1315
Eco57I CTGAAG 1 cut(s) 441
Eco88I CYCGRG 1 cut(s) 1304
EcoO109I RGGNCCY 1 cut(s) 1315
EcoRII CCWGG 4 cut(s) 242, 616, 1141, 1359
EcoRV GATATC 2 cut(s) 956, 1221
Esp3I CGTCTC 1 cut(s) 1234
FaeI CATG 8 cut(s) 443, 523, 590, 725, 860, 896, 1100, 1163
FaqI GGGAC 2 cut(s) 141, 1187
FatI CATG 8 cut(s) 439, 519, 586, 721, 856, 892, 1096, 1159
FbaI TGATCA 1 cut(s) 589
FblI GTMKAC 1 cut(s) 1024
Fnu4HI GCNGC 4 cut(s) 134, 252, 255, 1011
FokI GGATG 4 cut(s) 312, 752, 1085, 1294
Fsp4HI GCNGC 4 cut(s) 134, 252, 255, 1011
FspBI CTAG 3 cut(s) 759, 828, 1224
GlaI GCGC 1 cut(s) 167
GluI GCNGC 4 cut(s) 134, 252, 255, 1011
GsaI CCCAGC 1 cut(s) 1167
GsuI CTGGAG 6 cut(s) 158, 570, 645, 987, 1125, 1253
HaeII RGCGCY 1 cut(s) 169
HaeIII GGCC 3 cut(s) 106, 1002, 1303
HapII CCGG 3 cut(s) 65, 330, 1251
HgaI GACGC 3 cut(s) 12, 1191, 1216
HhaI GCGC 1 cut(s) 168
Hin1I GRCGYC 2 cut(s) 23, 897
Hin1II CATG 8 cut(s) 443, 523, 590, 725, 860, 896, 1100, 1163
Hin6I GCGC 1 cut(s) 166
HinP1I GCGC 1 cut(s) 166
HincII GTYRAC 1 cut(s) 1186
HindII GTYRAC 1 cut(s) 1186
HinfI GANTC 5 cut(s) 157, 345, 461, 791, 886
HpaII CCGG 3 cut(s) 65, 330, 1251
HphI GGTGA 4 cut(s) 40, 344, 349, 972
Hpy166II GTNNAC 5 cut(s) 31, 340, 1025, 1186, 1215
Hpy188I TCNGA 8 cut(s) 181, 363, 460, 532, 613, 680, 1207, 1234
Hpy8I GTNNAC 5 cut(s) 31, 340, 1025, 1186, 1215
Hpy99I CGWCG 1 cut(s) 28
HpyAV CCTTC 4 cut(s) 117, 550, 699, 878
HpyCH4III ACNGT 5 cut(s) 227, 273, 395, 733, 1029
HpyCH4IV ACGT 3 cut(s) 897, 1334, 1355
HpyCH4V TGCA 5 cut(s) 120, 221, 251, 745, 1010
HpyF10VI GCNNNNNNNGC 4 cut(s) 20, 139, 509, 860
HpyF3I CTNAG 3 cut(s) 360, 651, 677
HpySE526I ACGT 3 cut(s) 897, 1334, 1355
Hsp92I GRCGYC 2 cut(s) 23, 897
Hsp92II CATG 8 cut(s) 443, 523, 590, 725, 860, 896, 1100, 1163
HspAI GCGC 1 cut(s) 166
KpnI GGTACC 1 cut(s) 1266
Ksp22I TGATCA 1 cut(s) 589
Kzo9I GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
LmnI GCTCC 4 cut(s) 139, 452, 1141, 1324
Lsp1109I GCAGC 4 cut(s) 145, 241, 263, 1022
LweI GCATC 4 cut(s) 499, 617, 850, 1055
MaeI CTAG 3 cut(s) 759, 828, 1224
MaeII ACGT 3 cut(s) 897, 1334, 1355
MaeIII GTNAC 1 cut(s) 665
MalI GATC 9 cut(s) 36, 474, 591, 622, 826, 979, 1095, 1120, 1209
MboI GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
MboII GAAGA 3 cut(s) 293, 639, 1322
MflI RGATCY 3 cut(s) 472, 620, 824
MhlI GDGCHC 4 cut(s) 72, 264, 527, 546
MluCI AATT 1 cut(s) 506
MlyI GAGTC 1 cut(s) 166
MmeI TCCRAC 1 cut(s) 955
MslI CAYNNNNRTG 2 cut(s) 330, 1197
MspA1I CMGCKG 5 cut(s) 136, 254, 836, 923, 1013
MspI CCGG 3 cut(s) 65, 330, 1251
MspR9I CCNGG 5 cut(s) 244, 330, 618, 1143, 1361
Mva1269I GAATGC 1 cut(s) 1204
MvaI CCWGG 4 cut(s) 244, 618, 1143, 1361
MvnI CGCG 1 cut(s) 1322
MwoI GCNNNNNNNGC 4 cut(s) 20, 139, 509, 860
NciI CCSGG 1 cut(s) 330
NdeII GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
NlaIII CATG 8 cut(s) 443, 523, 590, 725, 860, 896, 1100, 1163
NlaIV GGNNCC 4 cut(s) 63, 129, 919, 1264
NmeAIII GCCGAG 2 cut(s) 283, 1093
NspI RCATGY 1 cut(s) 1163
PagI TCATGA 3 cut(s) 586, 856, 1096
PasI CCCWGGG 1 cut(s) 243
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 1361
PctI GAATGC 1 cut(s) 1204
PfeI GAWTC 4 cut(s) 345, 461, 791, 886
PflMI CCANNNNNTGG 1 cut(s) 623
PfoI TCCNGGA 1 cut(s) 1141
PkrI GCNGC 4 cut(s) 135, 253, 256, 1012
Ple19I CGATCG 1 cut(s) 37
PleI GAGTC 1 cut(s) 165
PpsI GAGTC 1 cut(s) 165
PpuMI RGGWCCY 1 cut(s) 1315
Psp5II RGGWCCY 1 cut(s) 1315
Psp6I CCWGG 4 cut(s) 242, 616, 1141, 1359
PspFI CCCAGC 1 cut(s) 1163
PspGI CCWGG 4 cut(s) 242, 616, 1141, 1359
PspN4I GGNNCC 4 cut(s) 63, 129, 919, 1264
PspPI GGNCC 5 cut(s) 128, 918, 1000, 1302, 1315
PspPPI RGGWCCY 1 cut(s) 1315
PsrI GAACNNNNNNTAC 2 cut(s) 23, 55
PstNI CAGNNNCTG 1 cut(s) 623
PsuI RGATCY 3 cut(s) 472, 620, 824
PvuI CGATCG 1 cut(s) 37
PvuII CAGCTG 4 cut(s) 136, 254, 836, 1013
RsaI GTAC 2 cut(s) 1249, 1264
RsaNI GTAC 2 cut(s) 1248, 1263
RseI CAYNNNNRTG 2 cut(s) 330, 1197
SatI GCNGC 4 cut(s) 134, 252, 255, 1011
Sau3AI GATC 9 cut(s) 34, 472, 589, 620, 824, 977, 1093, 1118, 1207
Sau96I GGNCC 5 cut(s) 128, 918, 1000, 1302, 1315
SchI GAGTC 1 cut(s) 166
ScrFI CCNGG 5 cut(s) 244, 330, 618, 1143, 1361
SduI GDGCHC 4 cut(s) 72, 264, 527, 546
SfaNI GCATC 4 cut(s) 499, 617, 850, 1055
SfcI CTRYAG 1 cut(s) 775
SinI GGWCC 3 cut(s) 128, 918, 1315
SmiMI CAYNNNNRTG 2 cut(s) 330, 1197
Sse9I AATT 1 cut(s) 506
SsiI CCGC 6 cut(s) 131, 921, 949, 1242, 1279, 1322
SspMI CTAG 3 cut(s) 759, 828, 1224
StyD4I CCNGG 5 cut(s) 242, 328, 616, 1141, 1359
TaaI ACNGT 5 cut(s) 227, 273, 395, 733, 1029
TaiI ACGT 3 cut(s) 900, 1337, 1358
TaqI TCGA 2 cut(s) 37, 1156
TasI AATT 1 cut(s) 506
TfiI GAWTC 4 cut(s) 345, 461, 791, 886
TscAI CASTG 6 cut(s) 53, 202, 394, 573, 640, 1034
TseI GCWGC 4 cut(s) 133, 251, 254, 1010
TspDTI ATGAA 7 cut(s) 17, 294, 575, 860, 977, 1113, 1181
TspGWI ACGGA 2 cut(s) 32, 1200
TspRI CASTG 6 cut(s) 53, 202, 394, 573, 640, 1034
Van91I CCANNNNNTGG 1 cut(s) 623
VpaK11BI GGWCC 3 cut(s) 128, 918, 1315
XapI RAATTY 1 cut(s) 506
XceI RCATGY 1 cut(s) 1163
XmiI GTMKAC 1 cut(s) 1024
XspI CTAG 3 cut(s) 759, 828, 1224
ZraI GACGTC 1 cut(s) 898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.