Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0003346

Physical Location & Seq

Genomic Coordinates Reverse (-)

3987832 .. 3992683

Gene Structure 4852 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g07500.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGAAACTCCGTCGCAGCAACCTCCGGCGAAGAAGAAGGAGACGCGGGGCCGCAAGCCCAAGCCCAAGGAGGACAAGACCGAGGCCCACTCGGCTTCGAAAACGAAGAAGGCCCAGCAGCAACAGCAACAGCAGCAGCAGCACAGCGTCGACGAGAAGTACACTCAGTGGAAGTCTCTCGTCCCCGTCCTCTACGACTGGCTCGCCAACCACAACCTCGTCTGGCCTTCCCTCTCTTGCCGGTGGGGCCCGCAGCTGGAGCAAGCTACCTACAAGAATCGCCAGCGGCTCTATCTCTCTGAGCAGACTGATGGCACGGTTCCGAATACTCTGGTTATTGCGAATTGCGAGGTTGTCAAACGCAGAGTTGCGGCTGCAGAGCACATTTCTCAGTTCAATGAGGAAGCGCGCTCGCCGTTTGTGAAGAAGTACAAGACCATCATACATCCTGGGGAGGTAAACAGAATTAGAGAGCTTCCGCAGAACACTCAGATAGTGGCAACACATACTGATAGTCCTGATGTCCTTATTTGGGATGTTGAAGCTCAACCTAACCGTCATGCTGTCAATGGGGCTACAAACTCACGTCCGGATTTGATTTTGACTGGACATCAAGATAATGCAGAATTTGCTCTTGCAATGTGTCCAACTGAACCCTATGTGCTCTCTGGAGGTAAGGACAAAACAGTGGTTCTGTGGAGTATTCAGGACCATATAGCAGCATCTACCACAGATCCAGCAGCAACCAAGTCTCCAGGATCTGGTGGATCAATTATTAAGCCTGAGGGTGGTAATGAAAAGATCGCTGATGGTCCTTCTGTTGCACCAAGAGGTGTCTACCAGGGCCATGAGGATACAGTGGAAGATGTGGCATTTTGCCCAACTAGCTCACAGGAGTTCTGTAGTGTTGGTGACGATTCTTGCCTTATACTATGGGATGCACGTGTGGGTTCTAGCCCTGCTGTTAAGGTTGAAAAAGCGCACGATGGCGATCTTCACTGTGTTGATTGGAATCCCCATGATGATAACCTTATCCTAACAGGGTCAGCAGATCATTCTGTTCGCATGTTTGATCGGCGGAATCTCACTTCTGGTGGAGTTGGGGCACCTATTTATAAGTTTGTGGGTCATACAGCTGCTGTTCTTTGTGTCCAGTGGTCTCCAGACAAATCATCCGTCTTTGGAAGTTCTGCAGAGGATGGTCTGTTAAACATTTGGGATTATGAGAAGGTCAGTAAAAAGGAGCGAACTTCCAAGAACTCAACTTCTCCTCCTGGATTGTTTTTCCAGCATGCTGGACACAGGGACAAAGTTGTTGATTTTCATTGGAATGCATCTGACCCATGGACTGTTGTTAGTGTGTCTGATGACTGTGATACTACTGGTGGAGGGGGTACATTGCAGATATGGCGCATGAGTGATTTGATCTACAGGCCTGAAGAAGAGGTTTTGGAAGAGCTCGAGAAGTTCAAGTCACATGTGATTTCTTGTGCAAAGCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009892 GO:0009987 GO:0010224 GO:0010468 GO:0010605 GO:0010629 GO:0019222 GO:0031461 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046872 GO:0048519 GO:0050789 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080008 GO:0090304 GO:1901360 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

CAF1C_H4-bd WD40

Protein Analysis

501

Amino Acids

55.39

Weight (kDa)

5.96

Isoelectric Point (pI)

46.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CAF1C_H4-bd	PF12265	52 - 119	1.3e-19	Histone-binding protein RBBP4 or subunit C of CAF1 complex
Beta-prop_TEP1_2nd	PF25047	273 - 413	2.6e-10	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	279 - 412	6.8e-19	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	279 - 417	2.5e-13	CDC20/Fizzy WD40 domain
Beta-prop_CAF1B_HIR1	PF24105	279 - 360	2.5e-06	CAF1B/HIR1 beta-propeller domain
Beta-prop_THOC3	PF25174	280 - 319	5.9e-06	THOC3 beta-propeller domain
Beta-prop_WDR3_1st	PF25173	281 - 358	7.1e-06	WDR3 first beta-propeller domain
Beta-prop_EIPR1	PF23609	283 - 357	2.3e-09	EIPR1 beta-propeller
Beta-prop_Aladin	PF25460	286 - 411	1.9e-06	Aladin seven-bladed propeller
Beta-prop_EML_2	PF23414	294 - 423	1.2e-08	Echinoderm microtubule-associated protein second beta-propeller
WD40_Prp19	PF24814	326 - 456	2e-10	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	328 - 417	1.3e-11	THOC3 beta-propeller domain
WD40_WDHD1_1st	PF24817	333 - 415	3.4e-06	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	337 - 415	2.5e-06	WDR3 first beta-propeller domain
WD40	PF00400	369 - 407	7.8e-07	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003346)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G19520 AT4G29730 AT4G29730 AT4G29730
fragaria_vesca	FvH4_1g07500 FvH4_6g33340 FvH4_6g33340
malus_domestica	MD02G1079600.v1.1 MD09G1193500.v1.1 MD15G1207100.v1.1
prunus_persica	Prupe.3G049900_v2.0.a1 Prupe.7G209600_v2.0.a1 Prupe.7G209600_v2.0.a1
pyrus_communis	pycom02g06340 pycom09g11000 pycom15g18350
rosa_chinensis	RchiOBHm_Chr2g0093391 RchiOBHm_Chr2g0143191
rosa_laevigata	RLG00000016395 RLG00000020012
rosa_multiflora	Rmu_sc0005227.1_g000015 Rmu_sc0032382.1_g000001 Rmu_ssc0000301.1_g000001
rosa_roxburghii	Rroxscaffold_2G00102060 Rroxscaffold_2G00148140
rosa_rugosa	Rorug02G0035100 Rorug02G0379000
rosa_samantha	Rh2AG431800 Rh2BG082700 Rh2BG440400 Rh2CG084700 Rh2CG417700 Rh2DG080400 Rh2DG450600
rosa_wichuraiana	Rw2G006520 Rw2G035280

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1116
AccB1I	GGYRCC	1 cut(s)	1105
AccB7I	CCANNNNNTGG	1 cut(s)	761
AccI	GTMKAC	2 cut(s)	150, 837
AccII	CGCG	2 cut(s)	46, 409
AccIII	TCCGGA	1 cut(s)	589
AciI	CCGC	7 cut(s)	46, 52, 251, 286, 371, 479, 1078
AclWI	GGATC	3 cut(s)	728, 766, 775
AcsI	RAATTY	1 cut(s)	626
AcuI	CTGAAG	1 cut(s)	1458
AcvI	CACGTG	1 cut(s)	944
AdeI	CACNNNGTG	1 cut(s)	168
AfaI	GTAC	3 cut(s)	161, 431, 1396
AfiI	CCNNNNNNNGG	4 cut(s)	256, 532, 761, 788
AflIII	ACRYGT	2 cut(s)	943, 1477
AgsI	TTSAA	4 cut(s)	397, 542, 974, 1471
AjiI	CACGTC	1 cut(s)	587
AjnI	CCWGG	4 cut(s)	448, 754, 840, 1273
AluBI	AGCT	7 cut(s)	256, 266, 475, 545, 888, 1136, 1459
AluI	AGCT	7 cut(s)	256, 266, 475, 545, 888, 1136, 1459
Alw21I	GWGCWC	3 cut(s)	384, 666, 1461
Alw26I	GTCTC	4 cut(s)	35, 180, 756, 1164
AlwI	GGATC	3 cut(s)	728, 766, 775
AlwNI	CAGNNNCTG	2 cut(s)	761, 1139
Ama87I	CYCGRG	1 cut(s)	1460
Aor13HI	TCCGGA	1 cut(s)	589
AoxI	GGCC	7 cut(s)	49, 84, 111, 224, 247, 844, 1433
ApaI	GGGCCC	1 cut(s)	251
ApoI	RAATTY	1 cut(s)	626
ArsI	GACNNNNNNTTYG	2 cut(s)	1161, 1193
AspLEI	GCGC	4 cut(s)	409, 411, 982, 1413
AspS9I	GGNCC	8 cut(s)	49, 85, 112, 247, 248, 709, 812, 844
AsuHPI	GGTGA	1 cut(s)	923
AsuII	TTCGAA	1 cut(s)	98
AvaI	CYCGRG	1 cut(s)	1460
AvaII	GGWCC	2 cut(s)	709, 812
AxyI	CCTNAGG	1 cut(s)	783
BaeGI	GKGCMC	2 cut(s)	251, 1108
BanI	GGYRCC	1 cut(s)	1105
BanII	GRGCYC	2 cut(s)	251, 1461
BbrPI	CACGTG	1 cut(s)	944
Bbv12I	GWGCWC	3 cut(s)	384, 666, 1461
BccI	CCATC	5 cut(s)	305, 446, 803, 980, 1193
BceAI	ACGGC	1 cut(s)	400
BciT130I	CCWGG	4 cut(s)	450, 756, 842, 1275
BciVI	GTATCC	1 cut(s)	847
BcoDI	GTCTC	4 cut(s)	35, 180, 756, 1164
BfaI	CTAG	2 cut(s)	885, 954
BfmI	CTRYAG	4 cut(s)	375, 901, 1191, 1429
BfuI	GTATCC	1 cut(s)	847
BglI	GCCNNNNNGGC	2 cut(s)	92, 246
Bme1390I	CCNGG	4 cut(s)	450, 756, 842, 1275
Bme18I	GGWCC	2 cut(s)	709, 812
BmeT110I	CYCGRG	1 cut(s)	1460
BmgBI	CACGTC	1 cut(s)	587
BmgT120I	GGNCC	8 cut(s)	49, 85, 112, 247, 248, 709, 812, 844
BmiI	GGNNCC	5 cut(s)	50, 248, 249, 321, 1107
BmrFI	CCNGG	4 cut(s)	450, 756, 842, 1275
BmsI	GCATC	3 cut(s)	731, 928, 1343
BplI	GAGNNNNNCTC	2 cut(s)	74, 106
BpmI	CTGGAG	4 cut(s)	278, 690, 738, 1146
Bpu14I	TTCGAA	1 cut(s)	98
BsaAI	YACGTR	1 cut(s)	944
BsaBI	GATNNNNATC	2 cut(s)	990, 1011
BsaI	GGTCTC	1 cut(s)	1164
BsaJI	CCNNGG	5 cut(s)	66, 81, 449, 841, 1343
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	4 cut(s)	736, 766, 1255, 1285
Bsc4I	CCNNNNNNNGG	4 cut(s)	256, 532, 761, 788
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	4 cut(s)	203, 610, 1153, 1387
Bse21I	CCTNAGG	1 cut(s)	783
Bse3DI	GCAATG	2 cut(s)	645, 1397
Bse8I	GATNNNNATC	2 cut(s)	990, 1011
BseAI	TCCGGA	1 cut(s)	589
BseBI	CCWGG	4 cut(s)	450, 756, 842, 1275
BseDI	CCNNGG	5 cut(s)	66, 81, 449, 841, 1343
BseGI	GGATG	5 cut(s)	445, 541, 943, 1172, 1204
BseJI	GATNNNNATC	2 cut(s)	990, 1011
BseLI	CCNNNNNNNGG	4 cut(s)	256, 532, 761, 788
BseMI	GCAATG	2 cut(s)	645, 1397
BseMII	CTCAG	5 cut(s)	179, 291, 404, 503, 774
BseNI	ACTGG	4 cut(s)	203, 610, 1153, 1387
BsePI	GCGCGC	1 cut(s)	407
BseRI	GAGGAG	1 cut(s)	1260
BseSI	GKGCMC	2 cut(s)	251, 1108
BseYI	CCCAGC	1 cut(s)	114
Bsh1236I	CGCG	2 cut(s)	46, 409
BshFI	GGCC	7 cut(s)	51, 86, 113, 226, 249, 846, 1435
BshNI	GGYRCC	1 cut(s)	1105
BsiHKAI	GWGCWC	3 cut(s)	384, 666, 1461
BsiHKCI	CYCGRG	1 cut(s)	1460
BsiSI	CCGG	3 cut(s)	26, 241, 590
BslFI	GGGAC	2 cut(s)	167, 1319
BslI	CCNNNNNNNGG	4 cut(s)	256, 532, 761, 788
BsmAI	GTCTC	4 cut(s)	35, 180, 756, 1164
BsmBI	CGTCTC	1 cut(s)	35
BsmFI	GGGAC	2 cut(s)	167, 1319
BsmI	GAATGC	1 cut(s)	1336
BsnI	GGCC	7 cut(s)	51, 86, 113, 226, 249, 846, 1435
Bso31I	GGTCTC	1 cut(s)	1164
BsoBI	CYCGRG	1 cut(s)	1460
Bsp119I	TTCGAA	1 cut(s)	98
Bsp120I	GGGCCC	1 cut(s)	247
Bsp1286I	GDGCHC	5 cut(s)	251, 384, 666, 1108, 1461
Bsp13I	TCCGGA	1 cut(s)	589
Bsp143I	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
Bsp19I	CCATGG	1 cut(s)	1343
BspACI	CCGC	7 cut(s)	46, 52, 251, 286, 371, 479, 1078
BspANI	GGCC	7 cut(s)	51, 86, 113, 226, 249, 846, 1435
BspCNI	CTCAG	5 cut(s)	178, 292, 403, 502, 775
BspEI	TCCGGA	1 cut(s)	589
BspFNI	CGCG	2 cut(s)	46, 409
BspLI	GGNNCC	5 cut(s)	50, 248, 249, 321, 1107
BspMAI	CTGCAG	2 cut(s)	379, 1195
BspPI	GGATC	3 cut(s)	728, 766, 775
BspQI	GCTCTTC	1 cut(s)	1449
BspT104I	TTCGAA	1 cut(s)	98
BspT107I	GGYRCC	1 cut(s)	1105
BspTNI	GGTCTC	1 cut(s)	1164
BsrDI	GCAATG	2 cut(s)	645, 1397
BsrFI	RCCGGY	1 cut(s)	240
BsrI	ACTGG	4 cut(s)	203, 610, 1153, 1387
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	5 cut(s)	66, 81, 449, 841, 1343
BssHII	GCGCGC	1 cut(s)	407
BssMI	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
BssT1I	CCWWGG	2 cut(s)	66, 1343
Bst2UI	CCWGG	4 cut(s)	450, 756, 842, 1275
Bst4CI	ACNGT	7 cut(s)	319, 557, 688, 859, 1001, 1351, 1373
Bst6I	CTCTTC	2 cut(s)	1437, 1449
BstAPI	GCANNNNNTGC	1 cut(s)	629
BstBAI	YACGTR	1 cut(s)	944
BstBI	TTCGAA	1 cut(s)	98
BstC8I	GCNNGC	8 cut(s)	56, 204, 251, 264, 284, 409, 413, 1293
BstDEI	CTNAG	5 cut(s)	165, 300, 390, 489, 783
BstDSI	CCRYGG	1 cut(s)	1343
BstF5I	GGATG	5 cut(s)	445, 541, 943, 1172, 1204
BstFNI	CGCG	2 cut(s)	46, 409
BstHHI	GCGC	4 cut(s)	409, 411, 982, 1413
BstKTI	GATC	8 cut(s)	736, 761, 770, 804, 994, 1054, 1075, 1428
BstMAI	GTCTC	4 cut(s)	35, 180, 756, 1164
BstMBI	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
BstMWI	GCNNNNNNNGC	9 cut(s)	92, 124, 133, 139, 246, 259, 629, 885, 1408
BstNI	CCWGG	4 cut(s)	450, 756, 842, 1275
BstNSI	RCATGY	3 cut(s)	1069, 1295, 1481
BstSCI	CCNGG	4 cut(s)	448, 754, 840, 1273
BstSFI	CTRYAG	4 cut(s)	375, 901, 1191, 1429
BstSLI	GKGCMC	2 cut(s)	251, 1108
BstUI	CGCG	2 cut(s)	46, 409
BstX2I	RGATCY	2 cut(s)	733, 758
BstXI	CCANNNNNNTGG	1 cut(s)	1295
BstYI	RGATCY	2 cut(s)	733, 758
Bsu36I	CCTNAGG	1 cut(s)	783
BsuI	GTATCC	1 cut(s)	847
BsuRI	GGCC	7 cut(s)	51, 86, 113, 226, 249, 846, 1435
BtgI	CCRYGG	1 cut(s)	1343
BtrI	CACGTC	1 cut(s)	587
BtsCI	GGATG	5 cut(s)	445, 541, 943, 1172, 1204
BtsIMutI	CAGTG	5 cut(s)	173, 693, 864, 997, 1160
Cac8I	GCNNGC	8 cut(s)	56, 204, 251, 264, 284, 409, 413, 1293
CaiI	CAGNNNCTG	2 cut(s)	761, 1139
CfoI	GCGC	4 cut(s)	409, 411, 982, 1413
Cfr10I	RCCGGY	1 cut(s)	240
Cfr13I	GGNCC	8 cut(s)	49, 85, 112, 247, 248, 709, 812, 844
CseI	GACGC	2 cut(s)	52, 136
Csp6I	GTAC	3 cut(s)	160, 430, 1395
CviAII	CATG	8 cut(s)	560, 848, 1019, 1066, 1292, 1344, 1414, 1478
CviQI	GTAC	3 cut(s)	160, 430, 1395
DdeI	CTNAG	5 cut(s)	165, 300, 390, 489, 783
DpnI	GATC	8 cut(s)	735, 760, 769, 803, 993, 1053, 1074, 1427
DpnII	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
DraIII	CACNNNGTG	1 cut(s)	168
Eam1104I	CTCTTC	2 cut(s)	1437, 1449
EarI	CTCTTC	2 cut(s)	1437, 1449
EciI	GGCGGA	1 cut(s)	1093
Ecl136II	GAGCTC	1 cut(s)	1459
Eco130I	CCWWGG	2 cut(s)	66, 1343
Eco147I	AGGCCT	1 cut(s)	1435
Eco24I	GRGCYC	2 cut(s)	251, 1461
Eco31I	GGTCTC	1 cut(s)	1164
Eco47I	GGWCC	2 cut(s)	709, 812
Eco53kI	GAGCTC	1 cut(s)	1459
Eco57I	CTGAAG	1 cut(s)	1458
Eco72I	CACGTG	1 cut(s)	944
Eco81I	CCTNAGG	1 cut(s)	783
Eco88I	CYCGRG	1 cut(s)	1460
EcoICRI	GAGCTC	1 cut(s)	1459
EcoO109I	RGGNCCY	1 cut(s)	247
EcoRII	CCWGG	4 cut(s)	448, 754, 840, 1273
EcoT14I	CCWWGG	2 cut(s)	66, 1343
EcoT22I	ATGCAT	1 cut(s)	1336
EcoT38I	GRGCYC	2 cut(s)	251, 1461
ErhI	CCWWGG	2 cut(s)	66, 1343
Esp3I	CGTCTC	1 cut(s)	35
FaeI	CATG	8 cut(s)	563, 851, 1022, 1069, 1295, 1347, 1417, 1481
FaqI	GGGAC	2 cut(s)	167, 1319
FatI	CATG	8 cut(s)	559, 847, 1018, 1065, 1291, 1343, 1413, 1477
FauI	CCCGC	2 cut(s)	39, 258
FblI	GTMKAC	2 cut(s)	150, 837
FokI	GGATG	5 cut(s)	432, 548, 950, 1159, 1211
FriOI	GRGCYC	2 cut(s)	251, 1461
FspBI	CTAG	2 cut(s)	885, 954
GlaI	GCGC	4 cut(s)	408, 410, 981, 1412
GsaI	CCCAGC	1 cut(s)	118
GsuI	CTGGAG	4 cut(s)	278, 690, 738, 1146
HaeIII	GGCC	7 cut(s)	51, 86, 113, 226, 249, 846, 1435
HapII	CCGG	3 cut(s)	26, 241, 590
HgaI	GACGC	2 cut(s)	52, 136
HhaI	GCGC	4 cut(s)	409, 411, 982, 1413
Hin1II	CATG	8 cut(s)	563, 851, 1022, 1069, 1295, 1347, 1417, 1481
Hin6I	GCGC	4 cut(s)	407, 409, 980, 1411
HinP1I	GCGC	4 cut(s)	407, 409, 980, 1411
HincII	GTYRAC	1 cut(s)	151
HindII	GTYRAC	1 cut(s)	151
HinfI	GANTC	4 cut(s)	277, 917, 1012, 1081
HpaII	CCGG	3 cut(s)	26, 241, 590
HphI	GGTGA	1 cut(s)	923
Hpy166II	GTNNAC	4 cut(s)	151, 162, 460, 838
Hpy188I	TCNGA	5 cut(s)	301, 324, 492, 1339, 1366
Hpy188III	TCNNGA	7 cut(s)	518, 590, 614, 669, 707, 1163, 1462
Hpy8I	GTNNAC	4 cut(s)	151, 162, 460, 838
Hpy99I	CGWCG	3 cut(s)	16, 152, 155
HpyAV	CCTTC	5 cut(s)	31, 103, 237, 825, 1222
HpyCH4III	ACNGT	7 cut(s)	319, 557, 688, 859, 1001, 1351, 1373
HpyCH4IV	ACGT	2 cut(s)	586, 943
HpyCH4V	TGCA	9 cut(s)	377, 623, 638, 824, 941, 1193, 1334, 1402, 1493
HpyF10VI	GCNNNNNNNGC	9 cut(s)	92, 124, 133, 139, 246, 259, 629, 885, 1408
HpyF3I	CTNAG	5 cut(s)	165, 300, 390, 489, 783
HpySE526I	ACGT	2 cut(s)	586, 943
Hsp92II	CATG	8 cut(s)	563, 851, 1022, 1069, 1295, 1347, 1417, 1481
HspAI	GCGC	4 cut(s)	407, 409, 980, 1411
Kpn2I	TCCGGA	1 cut(s)	589
Kzo9I	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
LguI	GCTCTTC	1 cut(s)	1449
LmnI	GCTCC	2 cut(s)	259, 1243
LweI	GCATC	3 cut(s)	731, 928, 1343
MaeI	CTAG	2 cut(s)	885, 954
MaeII	ACGT	2 cut(s)	586, 943
MaeIII	GTNAC	2 cut(s)	911, 1473
MalI	GATC	8 cut(s)	735, 760, 769, 803, 993, 1053, 1074, 1427
MboI	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
MboII	GAAGA	9 cut(s)	43, 46, 118, 436, 875, 986, 1451, 1454, 1466
MflI	RGATCY	2 cut(s)	733, 758
MhlI	GDGCHC	5 cut(s)	251, 384, 666, 1108, 1461
MluCI	AATT	4 cut(s)	343, 465, 626, 771
MmeI	TCCRAC	1 cut(s)	671
Mph1103I	ATGCAT	1 cut(s)	1336
MroI	TCCGGA	1 cut(s)	589
MseI	TTAA	3 cut(s)	777, 966, 1208
MslI	CAYNNNNRTG	1 cut(s)	1329
MspA1I	CMGCKG	3 cut(s)	256, 286, 1136
MspI	CCGG	3 cut(s)	26, 241, 590
MspR9I	CCNGG	4 cut(s)	450, 756, 842, 1275
Mva1269I	GAATGC	1 cut(s)	1336
MvaI	CCWGG	4 cut(s)	450, 756, 842, 1275
MvnI	CGCG	2 cut(s)	46, 409
MwoI	GCNNNNNNNGC	9 cut(s)	92, 124, 133, 139, 246, 259, 629, 885, 1408
NcoI	CCATGG	1 cut(s)	1343
NdeII	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
NlaIII	CATG	8 cut(s)	563, 851, 1022, 1069, 1295, 1347, 1417, 1481
NlaIV	GGNNCC	5 cut(s)	50, 248, 249, 321, 1107
NmeAIII	GCCGAG	1 cut(s)	71
NmuCI	GTSAC	2 cut(s)	911, 1473
NsiI	ATGCAT	1 cut(s)	1336
NspI	RCATGY	3 cut(s)	1069, 1295, 1481
NspV	TTCGAA	1 cut(s)	98
PaeI	GCATGC	1 cut(s)	1295
PaeR7I	CTCGAG	1 cut(s)	1460
PauI	GCGCGC	1 cut(s)	407
PceI	AGGCCT	1 cut(s)	1435
PciI	ACATGT	1 cut(s)	1477
PciSI	GCTCTTC	1 cut(s)	1449
PctI	GAATGC	1 cut(s)	1336
PfeI	GAWTC	4 cut(s)	277, 917, 1012, 1081
PflMI	CCANNNNNTGG	1 cut(s)	761
PfoI	TCCNGGA	2 cut(s)	754, 1273
PmaCI	CACGTG	1 cut(s)	944
PmlI	CACGTG	1 cut(s)	944
Ppu21I	YACGTR	1 cut(s)	944
PscI	ACATGT	1 cut(s)	1477
PsiI	TTATAA	1 cut(s)	1116
Psp124BI	GAGCTC	1 cut(s)	1461
Psp6I	CCWGG	4 cut(s)	448, 754, 840, 1273
PspCI	CACGTG	1 cut(s)	944
PspFI	CCCAGC	1 cut(s)	114
PspGI	CCWGG	4 cut(s)	448, 754, 840, 1273
PspN4I	GGNNCC	5 cut(s)	50, 248, 249, 321, 1107
PspOMI	GGGCCC	1 cut(s)	247
PspPI	GGNCC	8 cut(s)	49, 85, 112, 247, 248, 709, 812, 844
PstI	CTGCAG	2 cut(s)	379, 1195
PstNI	CAGNNNCTG	2 cut(s)	761, 1139
PsuI	RGATCY	2 cut(s)	733, 758
PteI	GCGCGC	1 cut(s)	407
PvuII	CAGCTG	2 cut(s)	256, 1136
RsaI	GTAC	3 cut(s)	161, 431, 1396
RsaNI	GTAC	3 cut(s)	160, 430, 1395
RseI	CAYNNNNRTG	1 cut(s)	1329
SacI	GAGCTC	1 cut(s)	1461
SalI	GTCGAC	1 cut(s)	149
SapI	GCTCTTC	1 cut(s)	1449
SaqAI	TTAA	3 cut(s)	777, 966, 1208
Sau3AI	GATC	8 cut(s)	733, 758, 767, 801, 991, 1051, 1072, 1425
Sau96I	GGNCC	8 cut(s)	49, 85, 112, 247, 248, 709, 812, 844
ScrFI	CCNGG	4 cut(s)	450, 756, 842, 1275
SduI	GDGCHC	5 cut(s)	251, 384, 666, 1108, 1461
SfaNI	GCATC	3 cut(s)	731, 928, 1343
SfcI	CTRYAG	4 cut(s)	375, 901, 1191, 1429
Sfr274I	CTCGAG	1 cut(s)	1460
SfuI	TTCGAA	1 cut(s)	98
SgrDI	CGTCGACG	1 cut(s)	149
SinI	GGWCC	2 cut(s)	709, 812
SlaI	CTCGAG	1 cut(s)	1460
SmiMI	CAYNNNNRTG	1 cut(s)	1329
SmlI	CTYRAG	1 cut(s)	1460
SmoI	CTYRAG	1 cut(s)	1460
SphI	GCATGC	1 cut(s)	1295
Sse9I	AATT	4 cut(s)	343, 465, 626, 771
SseBI	AGGCCT	1 cut(s)	1435
SsiI	CCGC	7 cut(s)	46, 52, 251, 286, 371, 479, 1078
SspMI	CTAG	2 cut(s)	885, 954
SstI	GAGCTC	1 cut(s)	1461
StuI	AGGCCT	1 cut(s)	1435
StyD4I	CCNGG	4 cut(s)	448, 754, 840, 1273
StyI	CCWWGG	2 cut(s)	66, 1343
TaaI	ACNGT	7 cut(s)	319, 557, 688, 859, 1001, 1351, 1373
TaiI	ACGT	2 cut(s)	589, 946
TaqI	TCGA	3 cut(s)	98, 150, 1461
TaqII	GACCGA	1 cut(s)	95
TasI	AATT	4 cut(s)	343, 465, 626, 771
TatI	WGTACW	2 cut(s)	159, 429
TauI	GCSGC	3 cut(s)	54, 289, 374
TfiI	GAWTC	4 cut(s)	277, 917, 1012, 1081
Tru1I	TTAA	3 cut(s)	777, 966, 1208
Tru9I	TTAA	3 cut(s)	777, 966, 1208
TscAI	CASTG	5 cut(s)	173, 693, 864, 1004, 1160
TseFI	GTSAC	2 cut(s)	911, 1473
Tsp45I	GTSAC	2 cut(s)	911, 1473
TspDTI	ATGAA	2 cut(s)	810, 1313
TspGWI	ACGGA	1 cut(s)	1165
TspRI	CASTG	5 cut(s)	173, 693, 864, 1004, 1160
Van91I	CCANNNNNTGG	1 cut(s)	761
VpaK11BI	GGWCC	2 cut(s)	709, 812
XapI	RAATTY	1 cut(s)	626
XceI	RCATGY	3 cut(s)	1069, 1295, 1481
XhoI	CTCGAG	1 cut(s)	1460
XmiI	GTMKAC	2 cut(s)	150, 837
XspI	CTAG	2 cut(s)	885, 954
Zsp2I	ATGCAT	1 cut(s)	1336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.