Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002065

Physical Location & Seq

Genomic Coordinates Reverse (-)

16029209 .. 16038324

Gene Structure 9116 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G33240.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5274 bp

ATGGACTCACAAGATCACAAAGCACCTGGCTTTGTTGACATAGTCAAATCTTGGATCCCTAGAAAGAGTGAGTCCTCAAATATGTCGAGGGATTTTTGGATGCCTGACCAAAGCTGTCCTGTGTGTTATGAGTGTGATGCTCAGTTCACTGTGTTTAATCGAAGACATCATTGCCGCCTTTGTGGTCGAGTTTTTTGTGCCAAATGCGCTGCAAATTCCATTCCATCTCCATCAGATGAAACAAAGGATAGTCATGAGGAACCAGAAAGGATTAGGGTGTGTAATTACTGCTACAAACAGTGGGAACAGGGGATAGTTCCCCCTGATAATGGGGCTTCTATTATTAGCCTTCATTTTAGTTCATCGCCTTCTGCTAGAAGCGTCGCAAGTACTACCTCTAATAGTAGCAACTGCACCATTGATTCAACTGCTGGACCTTCCCCTAGACCCAAAATGAATCCCCGAGCTAGCCGTCGTGTCTCGTCAAACATGGATTCTGAAAAGTCTGAGCAGCAGAATGCAAAATCGCGTAGGAGCTCAGATCATTATGGGCATGTGTTAGATTCTTCTGATAATCAAGTTGAATTCTTTGTCAACAGTAGTGGCAGGAGTGATGGTGAAGCTGATGACGATGACGATTATCAATCTGATTTTGCACAATCTTACGCTCAAGGAAATGACTACTATGGTGCCATCAACCTCGATGAAGTAGACCATATCTATGGGTCACATGAAGCTCATGACGTTGGTGTAAAAATAGAACCAAACATAAGTGGCTTTCCCCCTGATCAAGATCTTGACTCACTGAATACAGAGACGATAGATAAAACCAGACAACAAGAAAATGGATGGAACGATGTAAAGGAGGGAAGCCCTCCTTGTGAAGAGTCCTTTGAGCCCGAAGTTGTTGATTTTGAGAGTGATGGGCTCTTATGGCTACCACCAGAGCCAGAGAACGAAGAAGATGAAAGAGAAGCAGTGCTATCTGATGATGACGGTGATGAAGGTGATAGAGGTGATTGGGGGTACCTTCGCCCATCAAATAGCTTTAACGAGAAGGATTTCCACTCTAAGGACAAGTCCAGTGGTGCTATGAAAAATGTTGTTGAAGGGCACTTTAGGGCTTTGGTAGCACAACTTTTGGAGGTTGATAATCTACCTATGGTCAACGAAGGTGATGAAGAGGGCTGGCTTGATATAATTACATCATTATCTTGGGAGGCTGCAACGCTTCTCAAGCCAGATACAAGTAAAAGTGGAGGAATGGATCCAGGAGGATACGTGAAGGTTAAATGCATCCCTTGTGGACGTCGCAGTGAGAGTATGGTCGTGAAAGGAGTTGTTTGTAAGAAAAATGTGGCTCATCGGCGAATGACTTCAAAGATCGAGAAGCCGCGTCTGCTAATCCTTGGAGGAGCTCTGGAGTATCAGCGCATCTCTAACCAGCTGTCTAGTTTTGACACTTTGTTGCAACAGGAAATGGACCATTTGAAGATGGCTGTTGCCAAAATTGATTCTCACAATCCTGACATTCTCTTGGTGGAGAAATCTGTCTCGCGGTTTGCGCAGGAATATCTTCTCGCGAAGGACATATCTCTCGTGTTAAATATTAAAAGGTCCCTTCTAGAGCGCATATCCCGCTGTACTGGTGCGCAGATTGTCCCTTCGATCGACCAGCTCACATCACCAAAGCTAGGTTATTGTGACCTGTTCCATGTGGAAAAGTTTGTGGAGACACATGTTAGTCCTTGTCAAGTTGCGAAGAAAATGGCCAAGACTTTAATGTTTTTTGATGGCTGCCCGAAACCTTTGGGTTGTACAATATTGCTCAAGGGGGCACATGAAGATGAGCTAAAGAAGGTGAAACATGTGATTCAGTATGGAGTTTTTGCAGCATATCACTTGGCTCTTGAGACATCCTTCCTAGCAGATGAAGGTGCTTCCATTCACGAACTTCCTCTGCAGACCCCAATTACTGTGGCGTTACCTGATAAACCATCAATGGTTAACAGATCAATATCCACAATACCTGGTTTTACTGTGTCAAGTGCTGAAAAGTCTCCAACTACTGAGTTAAGGGGTGAGCCACATAAAGCCAATGGCGACCTTACTGGTAATTTCACTTCTAGTAAGACTCATTTCCAAGGGAAATTGGATGGAAACGACAGGATTGACCCATCTGAAAGACTGCTTCACAACTTGGATACTGTTTACTGTAAGCCTCCAGAAACTATTACCTCTAAGGACGATGGGTTAGTTCCTACTCTAGAATCCAGGCAGCTATCATTTCACGTGGAAGAACCTTCTGTTCAAAAAGATCAGTGGTCTGTTTTATCCGGTGCCACAGAACAAGTAACAGATGGTGGTTACACGAATGACTCCGCAGTAATAGGAAATCAAAATTTTAATAGACAGGAACAAATGGAATCTTCAAAAGGAGACTTTCATCCGTCAGCTTCTGACCATCAAAGTATATTGGTTTCCTTATCAACAAGATGCGTATGGAAAGGATCTGTGTGTGAGCGGGCTCATCTACTCCGTATCAAATACTATGGGAGCTTTGACAAGCCTTTAGGACGGTTTTTAAGGGATAATCTCTTTGATCAGGATCAGTGCTGCCCGTCATGTACGATGCCAGCGGAAGCACACATTCATTGTTATACTCATAGGCAAGGTAGTCTGACAATATCTGTTAAGAAACTGCCTGAATTGCTACCTGGGCAACGTGAAGGGAAGATTTGGATGTGGCATCGGTGCCTGAAATGTCCTCGGATCAATGGCTTTCCTCCAGCCACACGCAGAATTGTAATGTCAGATGCTGCGTGGGGCCTGTCTTTTGGCAAATTTTTGGAGCTGAGCTTTTCTAACCATGCAGCGGCTAGTCGTGTGGCCAACTGTGGTCATTCCCTTCACAGAGACTGTCTCCGGTTCTACGGTTTTGGGAGAATGGTTGCTTGCTTCCGCTATGCTTCAATCAATATTTACGCAGTGACTCTGCCACCAGCAAAGCTTTATTTTAACTATGAGAACCAGGAATGGCTCCAAAAGGAATCAAAAGAGGTGATTAAAAAAGCGGAAGTCCTTTTTAATGAGGTTCAGGAGGCTCTTAGTCAAATTTCAGCGAAAACTATGGGCGCAGGTTCCAAGGGCAGCACTCCCAACAAGATCAAGCTTTCTCTTGAAGAACTTGCAGGACTTCTTGAGCAACGTAAAAAGGAATATAAGGATTCATTGCAGCAAATGTTAAATGTGGTTAAGGATGGACAACCTACTATTGATATCCTTCTGATAAATAAACTTCGAAGGCTGATAATTTTCGATTCATATGCTTGGGATGAATGCCTAGCAGGGGCGGCCAATATGGTAAGAAATAACTATTTGGAAGCTCCGAAGAATTCAGCCCCAAAAGTTATGGGTCGTAACGTCTCCTTAGAGAAGCTCAGTGATGAAAAAGTAAAGTCGATACCGACCCATGTTGCAATTTGTAATGACTCTCTTCTCCAGGATGCAGACTACGAAACGTGTCTTAACCAAGGTAAATCATTTGCTGATACTAGTGGCAAATTTGCTATTCCTGAAGATGTAGGCTCAGACAGACCCCCAGATTGTAGGATGGAGTTCGACCCTAGTGAAGGTGGTAAAGATAATTTTGTAGAGTCTTCGCAGGTGGTTAAACCAGCACACACCGAGAGCCAGTTTCAAGCAACAGACTTATCTGATACTCTTGATGCAGCATGGATAGGTGAACAAACTACTTCAGAGAATGGTATTTTCCGTCCGCCTAGCAGAGCTGCTTCAACAAATGGAACTCAGATCCCTGATTTAAGGCTGTTGGGTTCAGAAAGTGAGCTGAACTTTAAAGGAGGCCCTACCAATGATGAACATACAACACAAGTTCAGTTGCCTTCTCCTAGTTTCTACTATTCACTCAACAAGAATTATTCGCTTAATTCTCGCAAGCATATCATGGCTGAAGACCGGCCTGTTTATGTTTCTTCATATAGAGAGCTTGAATGGCGAAGTGGTGCAAGGCTGCTGCTTCCTCTGGGATGTAATGACTTAGTACTGCCAGTTTATGATGACGAACCTACTAGTATCATAGCTTATGCCCTTACATCATCAGAATATAAAGCTCAGATGTCTGGATCAGATAAGTCAAGAGATCGCTTGGATAGTGGAGGTTCCTTTTCACTTTTTGATTCTGTTAATCTTCTCTCATTGAACTCTTTGAGTGATTTGTCGGTCGACATGAGTAGAAGTCTTAGCTCTGCTGATGAACAAGTCTCGCAGCTGCTACATTCATCACTGTATTTGAAAGATCTGCATGCGAGGATTTCGTTTACAGATGAAGGTCCTCCTGGGAAAGTGAAGTACTCTGTGACGTGTTATTATGCTAAGGAGTTTGAAGCCCTGAGGATGATTTGCTGTCCTTCAGAAACAGATTTCATTAGATCTCTTGGTCGTTGTAGAAAATGGGGAGCCCAGGGTGGAAAGAGCAACGTCTTCTTTGCAAAAAGTTTGGATGACCGTTTTATCATCAAGCAAGTTACAAAGACAGAGCTTGAGTCCTTCATCAAATTTGGGCCAGCTTACTTCAAATACCTGACTGAGTCCATCAGTACTAAAAGCCCTACAAGCCTTGCAAAGATCTTGGGAATCTATCAGGTTTCATCCAAACACCTTAAAGGAGGAAAAGAGTTCAAAATGGACGTCTTGGTGATGGAGAATCTTCTGTTCAAGCGAAACTTCACTAGGCTTTATGACCTAAAAGGCTCCACTCGGGCTCGTTACAATCCCGATACAAGTGGTAGCAATACAGTTTTGCTGGATCAGAATCTTGTCGAAGCAATGCCAACATCTCCAATATTTGTTGGGAGCAAGGCAAAACGGCTTCTTGAAAGAGCAGTCTGGAATGATACATCATTTCTTGCTTCGATTCACGTAATGGATTACTCCTTACTAGTCGGGGTAGATGAGGAAAGAAACGAGCTGGTTCTAGGAATTATCGATTTCATGAGGCAATACACTTGGGACAAACATCTGGAGACTTGGGTCAAGACTTCAGGGCTCCTTGGAGGACCCAAGAACTCAACTCCCACAGTGATATCGCCGCAGCAATACAAGAAAAGATTCAGGAAAGCGATGACGGCTTATTTTCTGATGGTTCCTGACCAGTGGTCGCCTGCCGCGGTTGTGCCAAGCAACAGTTCTTCAGCAGAGGTGAAGGAGGAAGAAGAGAAAGACAATCCTCAAGCTGTTGGTAACAAGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000285 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005768 GO:0005773 GO:0005774 GO:0005942 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006810 GO:0006996 GO:0007033 GO:0007275 GO:0008150 GO:0008152 GO:0008289 GO:0009555 GO:0009987 GO:0010008 GO:0010118 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0016301 GO:0016307 GO:0016310 GO:0016482 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0019898 GO:0030258 GO:0031090 GO:0031410 GO:0031982 GO:0032266 GO:0032501 GO:0032502 GO:0032991 GO:0035032 GO:0035091 GO:0042147 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0046907 GO:0048229 GO:0048856 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061695 GO:0070772 GO:0071704 GO:0071840 GO:0090332 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:1901981 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00562 ko04070 ko04145 ko04810 map00562 map04070 map04145 map04810

Pfam Domains

Protein Families

Cpn60_TCP1 FYVE PIP5K

Protein Analysis

1757

Amino Acids

196.19

Weight (kDa)

5.69

Isoelectric Point (pI)

45.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FYVE	PF01363	33 - 102	8.3e-19	FYVE zinc finger
Cpn60_TCP1	PF00118	398 - 643	5.5e-32	TCP-1/cpn60 chaperonin family
PIP5K	PF01504	1491 - 1657	5.4e-34	Phosphatidylinositol-4-phosphate 5-Kinase
PIP5K	PF01504	1660 - 1712	7e-08	Phosphatidylinositol-4-phosphate 5-Kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33240 AT4G33240 AT4G33240 AT4G33240 AT4G33240 AT4G33240 AT4G33240
fragaria_vesca	FvH4_1g09530 FvH4_1g09530 FvH4_1g09530 FvH4_1g09530 FvH4_1g09530 FvH4_1g09530
malus_domestica	MD02G1103900.v1.1 MD15G1224300.v1.1
prunus_persica	Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1
pyrus_communis	pycom02g08170 pycom15g19930 pycom15g19940
rosa_chinensis	RchiOBHm_Chr2g0096101
rosa_laevigata	RLG00000016625
rosa_multiflora	Rmu_sc0005996.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145750
rosa_rugosa	Rorug02G0057000 Rorug02G0057100 Rorug02G0057200 Rorug02G0057200
rosa_samantha	Rh2AG104000 Rh2BG106100 Rh2CG108000 Rh2DG106700
rosa_wichuraiana	Rw2G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3655
AatII	GACGTC	2 cut(s)	1312, 4713
Acc16I	TGCGCA	2 cut(s)	1566, 1653
Acc36I	ACCTGC	2 cut(s)	3128, 3655
Acc65I	GGTACC	1 cut(s)	1026
AccB1I	GGYRCC	4 cut(s)	689, 1026, 2339, 2754
AccBSI	CCGCTC	1 cut(s)	2524
AccI	GTMKAC	2 cut(s)	711, 4245
AccII	CGCG	5 cut(s)	529, 1396, 1558, 1583, 5189
AcoI	YGGCCR	3 cut(s)	1770, 2889, 3354
AcsI	RAATTY	8 cut(s)	214, 584, 2401, 2843, 3114, 3394, 3563, 4577
AcuI	CTGAAG	6 cut(s)	3597, 3741, 3993, 4416, 5046, 5196
AcvI	CACGTG	1 cut(s)	2293
AcyI	GRCGYC	2 cut(s)	1309, 4710
AfaI	GTAC	8 cut(s)	391, 1028, 1645, 1819, 2629, 4065, 4373, 4621
AfiI	CCNNNNNNNGG	6 cut(s)	329, 1072, 1694, 2875, 3349, 3632
AflIII	ACRYGT	4 cut(s)	1738, 1867, 3521, 4382
AhdI	GACNNNNNGTC	1 cut(s)	5176
AhlI	ACTAGT	3 cut(s)	3554, 4091, 4960
AjiI	CACGTC	1 cut(s)	4383
AjnI	CCWGG	9 cut(s)	25, 1270, 2029, 2273, 2716, 3030, 3501, 4357, 4482
AjuI	GAANNNNNNNTTGG	2 cut(s)	5191, 5223
Alw21I	GWGCWC	2 cut(s)	539, 1420
AlwNI	CAGNNNCTG	3 cut(s)	2459, 2819, 2919
Ama87I	CYCGRG	2 cut(s)	462, 4779
AoxI	GGCC	7 cut(s)	1770, 2827, 2889, 3354, 3865, 3980, 4583
ApoI	RAATTY	8 cut(s)	214, 584, 2401, 2843, 3114, 3394, 3563, 4577
ArsI	GACNNNNNNTTYG	2 cut(s)	4695, 4727
Asp700I	GAANNNNTTC	4 cut(s)	1061, 1375, 1575, 5129
Asp718I	GGTACC	1 cut(s)	1026
AspLEI	GCGC	6 cut(s)	209, 1434, 1567, 1632, 1654, 3137
AspS9I	GGNCC	8 cut(s)	434, 1483, 1617, 2827, 3866, 4352, 4583, 5078
AsuII	TTCGAA	1 cut(s)	3301
AsuNHI	GCTAGC	1 cut(s)	467
AvaI	CYCGRG	2 cut(s)	462, 4779
AvaII	GGWCC	5 cut(s)	434, 1483, 1617, 4352, 5078
AxyI	CCTNAGG	1 cut(s)	4412
BaeGI	GKGCMC	2 cut(s)	1116, 1840
BalI	TGGCCA	2 cut(s)	1772, 2891
BamHI	GGATCC	2 cut(s)	54, 1267
BanI	GGYRCC	4 cut(s)	689, 1026, 2339, 2754
BanII	GRGCYC	8 cut(s)	539, 900, 930, 1420, 2530, 4483, 4786, 5070
BarI	GAAGNNNNNNTAC	2 cut(s)	2107, 2139
BauI	CACGAG	1 cut(s)	1598
BbrPI	CACGTG	1 cut(s)	2293
BbsI	GAAGAC	4 cut(s)	169, 3651, 3981, 4495
Bbv12I	GWGCWC	2 cut(s)	539, 1420
BceAI	ACGGC	3 cut(s)	456, 4904, 5163
BcgI	CGANNNNNNTGC	2 cut(s)	3308, 3342
BciT130I	CCWGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
BciVI	GTATCC	2 cut(s)	1271, 2197
BclI	TGATCA	2 cut(s)	787, 2602
BcuI	ACTAGT	3 cut(s)	3554, 4091, 4960
BfmI	CTRYAG	1 cut(s)	1961
BfuAI	ACCTGC	2 cut(s)	3128, 3655
BfuI	GTATCC	2 cut(s)	1271, 2197
BglII	AGATCT	4 cut(s)	793, 4318, 4451, 4647
BlpI	GCTNAGC	1 cut(s)	2855
BmcAI	AGTACT	4 cut(s)	391, 4065, 4373, 4621
Bme1390I	CCNGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
Bme18I	GGWCC	5 cut(s)	434, 1483, 1617, 4352, 5078
BmeRI	GACNNNNNGTC	1 cut(s)	5176
BmeT110I	CYCGRG	2 cut(s)	462, 4779
BmgBI	CACGTC	1 cut(s)	4383
BmgT120I	GGNCC	8 cut(s)	434, 1483, 1617, 2827, 3866, 4352, 4583, 5078
BmrFI	CCNGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
BmtI	GCTAGC	1 cut(s)	471
BoxI	GACNNNNGTC	1 cut(s)	5051
BpiI	GAAGAC	4 cut(s)	169, 3651, 3981, 4495
BplI	GAGNNNNNCTC	2 cut(s)	2907, 2939
BpmI	CTGGAG	5 cut(s)	1442, 2208, 2772, 3485, 5063
Bpu10I	CCTNAGC	1 cut(s)	4395
Bpu1102I	GCTNAGC	1 cut(s)	2855
Bpu14I	TTCGAA	1 cut(s)	3301
BpuEI	CTTGAG	7 cut(s)	654, 1220, 1814, 1931, 3221, 4583, 5235
Bsa29I	ATCGAT	1 cut(s)	5007
BsaAI	YACGTR	3 cut(s)	1282, 2293, 4942
BsaBI	GATNNNNATC	4 cut(s)	792, 2017, 2607, 4833
BsaHI	GRCGYC	2 cut(s)	1309, 4710
BsaWI	WCCGGW	2 cut(s)	2336, 2925
BsaXI	ACNNNNNCTCC	4 cut(s)	601, 631, 1266, 1296
Bsc4I	CCNNNNNNNGG	6 cut(s)	329, 1072, 1694, 2875, 3349, 3632
Bse118I	RCCGGY	1 cut(s)	3978
Bse1I	ACTGG	6 cut(s)	1083, 1651, 2116, 3694, 4070, 5173
Bse21I	CCTNAGG	1 cut(s)	4412
Bse3DI	GCAATG	3 cut(s)	169, 3230, 4854
Bse8I	GATNNNNATC	4 cut(s)	792, 2017, 2607, 4833
BseBI	CCWGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
BseCI	ATCGAT	1 cut(s)	5007
BseJI	GATNNNNATC	4 cut(s)	792, 2017, 2607, 4833
BseLI	CCNNNNNNNGG	6 cut(s)	329, 1072, 1694, 2875, 3349, 3632
BseMI	GCAATG	3 cut(s)	169, 3230, 4854
BseNI	ACTGG	6 cut(s)	1083, 1651, 2116, 3694, 4070, 5173
BseRI	GAGGAG	1 cut(s)	1428
BseSI	GKGCMC	2 cut(s)	1116, 1840
BsgI	GTGCAG	1 cut(s)	397
Bsh1236I	CGCG	5 cut(s)	529, 1396, 1558, 1583, 5189
Bsh1285I	CGRYCG	2 cut(s)	1671, 4245
BshFI	GGCC	7 cut(s)	1772, 2829, 2891, 3356, 3867, 3982, 4585
BshNI	GGYRCC	4 cut(s)	689, 1026, 2339, 2754
BshVI	ATCGAT	1 cut(s)	5007
BsiEI	CGRYCG	2 cut(s)	1671, 4245
BsiHKAI	GWGCWC	2 cut(s)	539, 1420
BsiHKCI	CYCGRG	2 cut(s)	462, 4779
BsiSI	CCGG	3 cut(s)	2337, 2926, 3979
BslFI	GGGAC	3 cut(s)	1603, 1646, 5045
BslI	CCNNNNNNNGG	6 cut(s)	329, 1072, 1694, 2875, 3349, 3632
BsmBI	CGTCTC	2 cut(s)	809, 3430
BsmFI	GGGAC	3 cut(s)	1603, 1646, 5045
BsmI	GAATGC	2 cut(s)	523, 3344
BsnI	GGCC	7 cut(s)	1772, 2829, 2891, 3356, 3867, 3982, 4585
BsoBI	CYCGRG	2 cut(s)	462, 4779
Bsp119I	TTCGAA	1 cut(s)	3301
Bsp1407I	TGTACA	1 cut(s)	1817
Bsp1720I	GCTNAGC	1 cut(s)	2855
Bsp68I	TCGCGA	1 cut(s)	1583
BspANI	GGCC	7 cut(s)	1772, 2829, 2891, 3356, 3867, 3982, 4585
BspDI	ATCGAT	1 cut(s)	5007
BspFNI	CGCG	5 cut(s)	529, 1396, 1558, 1583, 5189
BspHI	TCATGA	3 cut(s)	253, 739, 5013
BspMAI	CTGCAG	1 cut(s)	1965
BspMI	ACCTGC	2 cut(s)	3128, 3655
BspOI	GCTAGC	1 cut(s)	471
BspT104I	TTCGAA	1 cut(s)	3301
BspT107I	GGYRCC	4 cut(s)	689, 1026, 2339, 2754
BsrBI	CCGCTC	1 cut(s)	2524
BsrDI	GCAATG	3 cut(s)	169, 3230, 4854
BsrFI	RCCGGY	1 cut(s)	3978
BsrGI	TGTACA	1 cut(s)	1817
BsrI	ACTGG	6 cut(s)	1083, 1651, 2116, 3694, 4070, 5173
BssAI	RCCGGY	1 cut(s)	3978
BssNI	GRCGYC	2 cut(s)	1309, 4710
BssSI	CACGAG	1 cut(s)	1598
BssT1I	CCWWGG	5 cut(s)	1408, 2143, 3144, 3532, 5071
Bst2BI	CACGAG	1 cut(s)	1598
Bst2UI	CCWGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
Bst6I	CTCTTC	4 cut(s)	879, 1176, 3501, 5229
BstACI	GRCGYC	2 cut(s)	1309, 4710
BstAUI	TGTACA	1 cut(s)	1817
BstBAI	YACGTR	3 cut(s)	1282, 2293, 4942
BstBI	TTCGAA	1 cut(s)	3301
BstC8I	GCNNGC	9 cut(s)	469, 1190, 2526, 2637, 2956, 3959, 4326, 4587, 5184
BstDSI	CCRYGG	1 cut(s)	5187
BstENI	CCTNNNNNAGG	1 cut(s)	3630
BstFNI	CGCG	5 cut(s)	529, 1396, 1558, 1583, 5189
BstHHI	GCGC	6 cut(s)	209, 1434, 1567, 1632, 1654, 3137
BstMCI	CGRYCG	2 cut(s)	1671, 4245
BstNI	CCWGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
BstNSI	RCATGY	4 cut(s)	557, 1742, 1871, 4328
BstPAI	GACNNNNGTC	1 cut(s)	5051
BstSCI	CCNGG	9 cut(s)	25, 1270, 2029, 2273, 2716, 3030, 3501, 4357, 4482
BstSFI	CTRYAG	1 cut(s)	1961
BstSLI	GKGCMC	2 cut(s)	1116, 1840
BstUI	CGCG	5 cut(s)	529, 1396, 1558, 1583, 5189
BstV2I	GAAGAC	4 cut(s)	169, 3651, 3981, 4495
BstX2I	RGATCY	8 cut(s)	54, 793, 1267, 2510, 3813, 4318, 4451, 4647
BstXI	CCANNNNNNTGG	1 cut(s)	722
BstYI	RGATCY	8 cut(s)	54, 793, 1267, 2510, 3813, 4318, 4451, 4647
Bsu15I	ATCGAT	1 cut(s)	5007
Bsu36I	CCTNAGG	1 cut(s)	4412
BsuI	GTATCC	2 cut(s)	1271, 2197
BsuRI	GGCC	7 cut(s)	1772, 2829, 2891, 3356, 3867, 3982, 4585
BsuTUI	ATCGAT	1 cut(s)	5007
BtgI	CCRYGG	1 cut(s)	5187
BtgZI	GCGATG	2 cut(s)	348, 5156
BtrI	CACGTC	1 cut(s)	4383
BtsI	GCAGTG	3 cut(s)	984, 1321, 2994
BtuMI	TCGCGA	1 cut(s)	1583
BveI	ACCTGC	2 cut(s)	3128, 3655
Cac8I	GCNNGC	9 cut(s)	469, 1190, 2526, 2637, 2956, 3959, 4326, 4587, 5184
CaiI	CAGNNNCTG	3 cut(s)	2459, 2819, 2919
CciI	TCATGA	3 cut(s)	253, 739, 5013
CfoI	GCGC	6 cut(s)	209, 1434, 1567, 1632, 1654, 3137
Cfr10I	RCCGGY	1 cut(s)	3978
Cfr13I	GGNCC	8 cut(s)	434, 1483, 1617, 2827, 3866, 4352, 4583, 5078
Cfr42I	CCGCGG	1 cut(s)	5190
ClaI	ATCGAT	1 cut(s)	5007
CseI	GACGC	2 cut(s)	370, 1385
CsiI	ACCWGGT	1 cut(s)	2029
Csp6I	GTAC	8 cut(s)	390, 1027, 1644, 1818, 2628, 4064, 4372, 4620
CspCI	CAANNNNNGTGG	6 cut(s)	583, 618, 1066, 1101, 1959, 1994
CviQI	GTAC	8 cut(s)	390, 1027, 1644, 1818, 2628, 4064, 4372, 4620
DraI	TTTAAA	1 cut(s)	3859
DriI	GACNNNNNGTC	1 cut(s)	5176
EaeI	YGGCCR	3 cut(s)	1770, 2889, 3354
Eam1104I	CTCTTC	4 cut(s)	879, 1176, 3501, 5229
Eam1105I	GACNNNNNGTC	1 cut(s)	5176
EarI	CTCTTC	4 cut(s)	879, 1176, 3501, 5229
EciI	GGCGGA	1 cut(s)	3768
Ecl136II	GAGCTC	2 cut(s)	537, 1418
Eco130I	CCWWGG	5 cut(s)	1408, 2143, 3144, 3532, 5071
Eco24I	GRGCYC	8 cut(s)	539, 900, 930, 1420, 2530, 4483, 4786, 5070
Eco32I	GATATC	2 cut(s)	3280, 5106
Eco47I	GGWCC	5 cut(s)	434, 1483, 1617, 4352, 5078
Eco53kI	GAGCTC	2 cut(s)	537, 1418
Eco57I	CTGAAG	6 cut(s)	3597, 3741, 3993, 4416, 5046, 5196
Eco72I	CACGTG	1 cut(s)	2293
Eco81I	CCTNAGG	1 cut(s)	4412
Eco88I	CYCGRG	2 cut(s)	462, 4779
EcoICRI	GAGCTC	2 cut(s)	537, 1418
EcoNI	CCTNNNNNAGG	1 cut(s)	3630
EcoO109I	RGGNCCY	5 cut(s)	1617, 2827, 3866, 4352, 5078
EcoRI	GAATTC	2 cut(s)	584, 3394
EcoRII	CCWGG	9 cut(s)	25, 1270, 2029, 2273, 2716, 3030, 3501, 4357, 4482
EcoRV	GATATC	2 cut(s)	3280, 5106
EcoT14I	CCWWGG	5 cut(s)	1408, 2143, 3144, 3532, 5071
EcoT22I	ATGCAT	1 cut(s)	1298
EcoT38I	GRGCYC	8 cut(s)	539, 900, 930, 1420, 2530, 4483, 4786, 5070
ErhI	CCWWGG	5 cut(s)	1408, 2143, 3144, 3532, 5071
Esp3I	CGTCTC	2 cut(s)	809, 3430
FalI	AAGNNNNNCTT	4 cut(s)	862, 894, 4730, 4762
FaqI	GGGAC	3 cut(s)	1603, 1646, 5045
FauI	CCCGC	2 cut(s)	1646, 2517
FauNDI	CATATG	1 cut(s)	3325
FbaI	TGATCA	2 cut(s)	787, 2602
FblI	GTMKAC	2 cut(s)	711, 4245
FriOI	GRGCYC	8 cut(s)	539, 900, 930, 1420, 2530, 4483, 4786, 5070
FspI	TGCGCA	2 cut(s)	1566, 1653
GlaI	GCGC	6 cut(s)	208, 1433, 1566, 1631, 1653, 3136
GsuI	CTGGAG	5 cut(s)	1442, 2208, 2772, 3485, 5063
HaeIII	GGCC	7 cut(s)	1772, 2829, 2891, 3356, 3867, 3982, 4585
HapII	CCGG	3 cut(s)	2337, 2926, 3979
HgaI	GACGC	2 cut(s)	370, 1385
HhaI	GCGC	6 cut(s)	209, 1434, 1567, 1632, 1654, 3137
Hin1I	GRCGYC	2 cut(s)	1309, 4710
Hin6I	GCGC	6 cut(s)	207, 1432, 1565, 1630, 1652, 3135
HinP1I	GCGC	6 cut(s)	207, 1432, 1565, 1630, 1652, 3135
HincII	GTYRAC	5 cut(s)	37, 595, 1168, 2008, 4246
HindII	GTYRAC	5 cut(s)	37, 595, 1168, 2008, 4246
HindIII	AAGCTT	2 cut(s)	3008, 3170
HpaI	GTTAAC	1 cut(s)	2008
HpaII	CCGG	3 cut(s)	2337, 2926, 3979
Hpy99I	CGWCG	3 cut(s)	386, 477, 1314
Hsp92I	GRCGYC	2 cut(s)	1309, 4710
HspAI	GCGC	6 cut(s)	207, 1432, 1565, 1630, 1652, 3135
KpnI	GGTACC	1 cut(s)	1030
Ksp22I	TGATCA	2 cut(s)	787, 2602
KspAI	GTTAAC	1 cut(s)	2008
KspI	CCGCGG	1 cut(s)	5190
MabI	ACCWGGT	1 cut(s)	2029
MbiI	CCGCTC	1 cut(s)	2524
MflI	RGATCY	8 cut(s)	54, 793, 1267, 2510, 3813, 4318, 4451, 4647
MlsI	TGGCCA	2 cut(s)	1772, 2891
MluNI	TGGCCA	2 cut(s)	1772, 2891
MmeI	TCCRAC	1 cut(s)	2087
Mox20I	TGGCCA	2 cut(s)	1772, 2891
Mph1103I	ATGCAT	1 cut(s)	1298
MroXI	GAANNNNTTC	4 cut(s)	1061, 1375, 1575, 5129
MscI	TGGCCA	2 cut(s)	1772, 2891
MslI	CAYNNNNRTG	2 cut(s)	720, 1845
Msp20I	TGGCCA	2 cut(s)	1772, 2891
MspA1I	CMGCKG	6 cut(s)	1447, 1641, 2639, 2876, 4291, 5189
MspI	CCGG	3 cut(s)	2337, 2926, 3979
MspR9I	CCNGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
Mva1269I	GAATGC	2 cut(s)	523, 3344
MvaI	CCWGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
MvnI	CGCG	5 cut(s)	529, 1396, 1558, 1583, 5189
NdeI	CATATG	1 cut(s)	3325
NheI	GCTAGC	1 cut(s)	467
NmuCI	GTSAC	4 cut(s)	726, 1703, 2989, 4378
NruI	TCGCGA	1 cut(s)	1583
NsbI	TGCGCA	2 cut(s)	1566, 1653
NsiI	ATGCAT	1 cut(s)	1298
NspI	RCATGY	4 cut(s)	557, 1742, 1871, 4328
NspV	TTCGAA	1 cut(s)	3301
PaeI	GCATGC	1 cut(s)	4328
PagI	TCATGA	3 cut(s)	253, 739, 5013
PaqCI	CACCTGC	1 cut(s)	3655
PasI	CCCWGGG	1 cut(s)	4483
PciI	ACATGT	2 cut(s)	1738, 1867
PctI	GAATGC	2 cut(s)	523, 3344
PdmI	GAANNNNTTC	4 cut(s)	1061, 1375, 1575, 5129
PflFI	GACNNNGTC	2 cut(s)	41, 4609
PfoI	TCCNGGA	2 cut(s)	1270, 3501
Ple19I	CGATCG	1 cut(s)	1671
PmaCI	CACGTG	1 cut(s)	2293
PmlI	CACGTG	1 cut(s)	2293
Ppu21I	YACGTR	3 cut(s)	1282, 2293, 4942
PpuMI	RGGWCCY	3 cut(s)	1617, 4352, 5078
PscI	ACATGT	2 cut(s)	1738, 1867
PshAI	GACNNNNGTC	1 cut(s)	5051
Psp124BI	GAGCTC	2 cut(s)	539, 1420
Psp5II	RGGWCCY	3 cut(s)	1617, 4352, 5078
Psp6I	CCWGG	9 cut(s)	25, 1270, 2029, 2273, 2716, 3030, 3501, 4357, 4482
PspCI	CACGTG	1 cut(s)	2293
PspGI	CCWGG	9 cut(s)	25, 1270, 2029, 2273, 2716, 3030, 3501, 4357, 4482
PspPI	GGNCC	8 cut(s)	434, 1483, 1617, 2827, 3866, 4352, 4583, 5078
PspPPI	RGGWCCY	3 cut(s)	1617, 4352, 5078
PstI	CTGCAG	1 cut(s)	1965
PstNI	CAGNNNCTG	3 cut(s)	2459, 2819, 2919
PsuI	RGATCY	8 cut(s)	54, 793, 1267, 2510, 3813, 4318, 4451, 4647
PsyI	GACNNNGTC	2 cut(s)	41, 4609
PvuI	CGATCG	1 cut(s)	1671
PvuII	CAGCTG	2 cut(s)	1447, 4291
RruI	TCGCGA	1 cut(s)	1583
RsaI	GTAC	8 cut(s)	391, 1028, 1645, 1819, 2629, 4065, 4373, 4621
RsaNI	GTAC	8 cut(s)	390, 1027, 1644, 1818, 2628, 4064, 4372, 4620
RseI	CAYNNNNRTG	2 cut(s)	720, 1845
SacI	GAGCTC	2 cut(s)	539, 1420
SacII	CCGCGG	1 cut(s)	5190
SalI	GTCGAC	1 cut(s)	4244
Sau96I	GGNCC	8 cut(s)	434, 1483, 1617, 2827, 3866, 4352, 4583, 5078
ScaI	AGTACT	4 cut(s)	391, 4065, 4373, 4621
ScrFI	CCNGG	9 cut(s)	27, 1272, 2031, 2275, 2718, 3032, 3503, 4359, 4484
SexAI	ACCWGGT	1 cut(s)	2029
SfcI	CTRYAG	1 cut(s)	1961
Sfr303I	CCGCGG	1 cut(s)	5190
SfuI	TTCGAA	1 cut(s)	3301
SgrBI	CCGCGG	1 cut(s)	5190
SinI	GGWCC	5 cut(s)	434, 1483, 1617, 4352, 5078
SmiMI	CAYNNNNRTG	2 cut(s)	720, 1845
SmlI	CTYRAG	7 cut(s)	669, 1235, 1829, 1910, 3200, 4562, 5250
SmoI	CTYRAG	7 cut(s)	669, 1235, 1829, 1910, 3200, 4562, 5250
SpeI	ACTAGT	3 cut(s)	3554, 4091, 4960
SphI	GCATGC	1 cut(s)	4328
SspI	AATATT	4 cut(s)	1609, 1824, 2980, 4866
SstI	GAGCTC	2 cut(s)	539, 1420
StyD4I	CCNGG	9 cut(s)	25, 1270, 2029, 2273, 2716, 3030, 3501, 4357, 4482
StyI	CCWWGG	5 cut(s)	1408, 2143, 3144, 3532, 5071
TaqII	GACCGA	1 cut(s)	4231
TatI	WGTACW	6 cut(s)	389, 1643, 1817, 4063, 4371, 4619
TauI	GCSGC	6 cut(s)	177, 1396, 2879, 3356, 5113, 5189
TseFI	GTSAC	4 cut(s)	726, 1703, 2989, 4378
Tsp45I	GTSAC	4 cut(s)	726, 1703, 2989, 4378
TspGWI	ACGGA	3 cut(s)	2439, 2528, 3764
Tth111I	GACNNNGTC	2 cut(s)	41, 4609
VpaK11BI	GGWCC	5 cut(s)	434, 1483, 1617, 4352, 5078
XagI	CCTNNNNNAGG	1 cut(s)	3630
XapI	RAATTY	8 cut(s)	214, 584, 2401, 2843, 3114, 3394, 3563, 4577
XbaI	TCTAGA	2 cut(s)	1624, 2266
XceI	RCATGY	4 cut(s)	557, 1742, 1871, 4328
XmiI	GTMKAC	2 cut(s)	711, 4245
XmnI	GAANNNNTTC	4 cut(s)	1061, 1375, 1575, 5129
ZraI	GACGTC	2 cut(s)	1310, 4711
ZrmI	AGTACT	4 cut(s)	391, 4065, 4373, 4621
Zsp2I	ATGCAT	1 cut(s)	1298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.