Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002065

Physical Location & Seq

Genomic Coordinates Forward (+)

14270673 .. 14273269

Gene Structure 2597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g19940.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGCCATCAGAAGCGCATGTTCATTGTTATACTCATAGACAAGGGAGCCTTACAATATCCGTTAAGAAGCTCCCAGAGATTTTGCTACCAGGGGAAAGGGAAGGAAAAATTTGGATGTGGCACAGGTGCTTGAAATGTCCTCGAACCAATGGCTTCCCTCCTGCAACTCGAAGAGTAGTCATGTCAGATGCTGCTTGGGGTTTGTCATTTGGGAAGTTTTTGGAGTTAAGCTTTTCAAATCATGCAGCTGCAAACAGAGTTGCAACTTGCGGTCATTCCCTTCACAGAGATTGTCTTCGGTTTTATGGTTTCGGAAGAATGGTTGCTTGCTTCAGCTATGCCTCCATTCATGTTCATTCTGTTTATCTTCCACCACAAAAACTCGAATTTCACAATGATAATCAGGAATGGATACAAAAAGAAGCGGAGGAGGTGGGTCATCGGGCAGAGCTTCTCTTTACTGAATTGCGCAATGCTCTTAATCAGATTCTGGAGAAGAGACCAATTTCGGGGACAGCAGATGGTGGTAAGAAAGCACCTGAATCAAGTCAAATTGTAGAACTTGAAGAGATGCTTCAAAAGGAAAGAGAAGACTTTGAGGAATCATTACAAAAAACGATGCATAAGGAGGTGAAGTTTGGCCAGCCTGCAGTTGATATTCTCGAGATCGATAGATTAAGGAGGCAGTTGCTTTTTCACTCTTACATTTGGGATCAACGCCTAATTCAGGCTGCCAGTTTAAGTAAAAAGAGTTTCCAGGAAGGTTTGAGCAGTTCCCTTCCAAAACTCAAGGAGAAACCTATCAGTTCTATGGAGAAGCTTGTCGACACAAATATAAACTCCATGCCAGGTAAAGGATTAAGTAGTAGTGATTCCTCTCTTCGGGAAACAAAGCCTGATGTAAGTATTTATCAAGGAGGAGATGTTGGCAGCTTTAGCCAGCCTGGAGGGGAGCAGAACACAAATGAAATGGTTCAGGACCAGAATCATAGTAATGAGGCAAAAAATTTCACACCTTCATCTGACAATTCCATTGATGAATCTGATCCATTGGAATCTGGAACAAGTGTACGAAGGACCCTCTCAGAAGGGAACGAGAGTCCAGTAGTGGCGAATTTATCTGATACCCTTGATGCGGCTTGGACTGGTGAAAGTCACCCAACAAGTACGATACCTAAAGAGAATGACTACTCTCTACCTGATTCAACCTTGGTAAATTCTGCAACTGTGTTGAGAAAAGTTGAATCGAATTCAGATTTGCAAAATTGTGCTGTTGACCAAGCTGGGGTAAAGGCAACTGCTCCAACTCATTCTCTTAGCTCTAAATCTCTCAAGGTGTTTGACAAAAATTATTCCTTTAATTCTCAAAAGATCATCATTGGTGAATACAATCCCGTCAATGTTTCGATGTTTCGGGAATTGGAAAGGCAAAGCGGTGCCAGACTGTTACTGCCCATTGGTGTTAATGACAGTGTCATCCCTGTTTTTGACGATGAACCCACTAGTGTTATTGCATATGCACTTGTCTCGTCAGATTACCATTTGCAGATTTCCGAGTCTGAGAGACCAAGAGATGCTCTGGATAGTTCAGTCTCATTACCTCTTTTTGATTCCGCAAATCTTCTCTCACTTAGCTCTTTTGATGAGTCGCTTTCTGAGACCTACAGAAATCTTGGTTCTTCTGATGAGGGCATGTTATCTTTGTCACAGTCACGGAGCTCTCAAGCTTTGGACTCACTTTTGTCAAAGGACATTCATGCTAGAGTTTCTTTTACCGATGGTGGCCCCCTTGGGAAGGTGAAGTATACAGTGACATGTTACTACGCAACGAGGTTTGAGGCTTTAAGGAGGACGTGTTGCCCTTCTGAAAGAGATTTCGTGCGATCTCTTAGCCGTTGTAAGAAGTGGGGCGCCCAGGGTGGCAAGAGCAACGTCTTCTTTGCAAAAACCTTGGATCGATCGGTTTATCATCAAACAAGTTACAAAGACAGAGCTGGAATCATTTATCAAGTTTGCACCATCTTATTTCAAGTATTTGTCGGAGTCAATCAGTACAAGAAGCCCAACTTGCCTGGCAAAGGTCCTGGGTATTTATCAGGTTTCGTCAAAGCATGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000285 GO:0000322 GO:0000323 GO:0000324 GO:0000329 GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005774 GO:0005942 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006810 GO:0006996 GO:0007033 GO:0008150 GO:0008152 GO:0008289 GO:0009987 GO:0010008 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016197 GO:0016301 GO:0016307 GO:0016310 GO:0016482 GO:0016740 GO:0016772 GO:0016773 GO:0019637 GO:0019898 GO:0030258 GO:0031090 GO:0031410 GO:0031982 GO:0032266 GO:0032991 GO:0035032 GO:0035091 GO:0042147 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0046486 GO:0046488 GO:0046834 GO:0046854 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061695 GO:0070772 GO:0071704 GO:0071840 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:1901981 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00562 ko04070 ko04145 ko04810 map00562 map04070 map04145 map04810

Pfam Domains

Protein Families

Cpn60_TCP1 FYVE PIP5K

Protein Analysis

706

Amino Acids

78.49

Weight (kDa)

6.37

Isoelectric Point (pI)

45.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002065)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33240 AT4G33240 AT4G33240 AT4G33240 AT4G33240 AT4G33240 AT4G33240
fragaria_vesca	FvH4_1g09530 FvH4_1g09530 FvH4_1g09530 FvH4_1g09530 FvH4_1g09530 FvH4_1g09530
malus_domestica	MD02G1103900.v1.1 MD15G1224300.v1.1
prunus_persica	Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1 Prupe.7G191000_v2.0.a1
pyrus_communis	pycom02g08170 pycom15g19930 pycom15g19940
rosa_chinensis	RchiOBHm_Chr2g0096101
rosa_laevigata	RLG00000016625
rosa_multiflora	Rmu_sc0005996.1_g000006
rosa_roxburghii	Rroxscaffold_2G00145750
rosa_rugosa	Rorug02G0057000 Rorug02G0057100 Rorug02G0057200 Rorug02G0057200
rosa_samantha	Rh2AG104000 Rh2BG106100 Rh2CG108000 Rh2DG106700
rosa_wichuraiana	Rw2G007990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	470
AccB1I	GGYRCC	2 cut(s)	1436, 1910
AccI	GTMKAC	2 cut(s)	825, 1805
AciI	CCGC	5 cut(s)	270, 425, 1136, 1434, 1614
AclWI	GGATC	3 cut(s)	720, 1040, 1962
AcoI	YGGCCR	1 cut(s)	640
AcsI	RAATTY	6 cut(s)	108, 386, 1006, 1114, 1216, 1249
AcuI	CTGAAG	1 cut(s)	316
AcyI	GRCGYC	1 cut(s)	1911
AfaI	GTAC	3 cut(s)	1071, 1168, 2054
AfiI	CCNNNNNNNGG	8 cut(s)	509, 727, 854, 882, 1135, 1285, 1795, 2078
AflIII	ACRYGT	2 cut(s)	1814, 1853
AgsI	TTSAA	7 cut(s)	133, 237, 566, 578, 1206, 1244, 2030
AhlI	ACTAGT	1 cut(s)	1502
AjiI	CACGTC	1 cut(s)	1854
AjnI	CCWGG	7 cut(s)	88, 756, 847, 943, 1914, 2071, 2083
Alw21I	GWGCWC	1 cut(s)	1721
Alw26I	GTCTC	5 cut(s)	493, 1531, 1558, 1597, 1652
AlwI	GGATC	3 cut(s)	720, 1040, 1962
AlwNI	CAGNNNCTG	2 cut(s)	191, 490
Ama87I	CYCGRG	1 cut(s)	662
AoxI	GGCC	2 cut(s)	640, 1783
ApeKI	GCWGC	5 cut(s)	191, 245, 248, 731, 930
ApoI	RAATTY	6 cut(s)	108, 386, 1006, 1114, 1216, 1249
Asp700I	GAANNNNTTC	1 cut(s)	972
AspLEI	GCGC	3 cut(s)	16, 471, 1913
AspS9I	GGNCC	4 cut(s)	979, 1077, 1784, 2081
AsuHPI	GGTGA	5 cut(s)	643, 1148, 1160, 1394, 1810
AvaI	CYCGRG	1 cut(s)	662
AvaII	GGWCC	3 cut(s)	979, 1077, 2081
BalI	TGGCCA	1 cut(s)	642
BanI	GGYRCC	2 cut(s)	1436, 1910
BanII	GRGCYC	1 cut(s)	1721
BbsI	GAAGAC	3 cut(s)	287, 597, 1927
Bbv12I	GWGCWC	1 cut(s)	1721
BbvI	GCAGC	5 cut(s)	178, 235, 257, 718, 942
BccI	CCATC	4 cut(s)	13, 515, 1772, 2027
BceAI	ACGGC	1 cut(s)	1878
BcgI	CGANNNNNNTGC	2 cut(s)	1509, 1543
BciT130I	CCWGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
BciVI	GTATCC	1 cut(s)	405
BcoDI	GTCTC	5 cut(s)	493, 1531, 1558, 1597, 1652
BcuI	ACTAGT	1 cut(s)	1502
BfaI	CTAG	2 cut(s)	1503, 1761
BfmI	CTRYAG	2 cut(s)	648, 1663
BfoI	RGCGCY	1 cut(s)	1914
BfuI	GTATCC	1 cut(s)	405
BisI	GCNGC	6 cut(s)	192, 246, 249, 732, 931, 1137
BlsI	GCNGC	6 cut(s)	193, 247, 250, 733, 932, 1138
Bme1390I	CCNGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
Bme18I	GGWCC	3 cut(s)	979, 1077, 2081
BmeT110I	CYCGRG	1 cut(s)	662
BmgBI	CACGTC	1 cut(s)	1854
BmgT120I	GGNCC	4 cut(s)	979, 1077, 1784, 2081
BmiI	GGNNCC	5 cut(s)	47, 1079, 1438, 1786, 1912
BmrFI	CCNGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
BmsI	GCATC	5 cut(s)	178, 561, 609, 1123, 1564
BpiI	GAAGAC	3 cut(s)	287, 597, 1927
BpmI	CTGGAG	2 cut(s)	512, 966
BpuEI	CTTGAG	3 cut(s)	773, 1316, 1707
Bsa29I	ATCGAT	2 cut(s)	669, 1957
BsaHI	GRCGYC	1 cut(s)	1911
BsaI	GGTCTC	3 cut(s)	493, 1558, 1652
BsaJI	CCNNGG	7 cut(s)	89, 1209, 1789, 1914, 1915, 1950, 2084
BsaXI	ACNNNNNCTCC	6 cut(s)	620, 650, 909, 939, 1840, 1870
Bsc4I	CCNNNNNNNGG	8 cut(s)	509, 727, 854, 882, 1135, 1285, 1795, 2078
Bse1I	ACTGG	3 cut(s)	735, 1103, 1150
Bse3DI	GCAATG	1 cut(s)	478
BseBI	CCWGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
BseCI	ATCGAT	2 cut(s)	669, 1957
BseDI	CCNNGG	7 cut(s)	89, 1209, 1789, 1914, 1915, 1950, 2084
BseGI	GGATG	2 cut(s)	120, 1476
BseLI	CCNNNNNNNGG	8 cut(s)	509, 727, 854, 882, 1135, 1285, 1795, 2078
BseMI	GCAATG	1 cut(s)	478
BseMII	CTCAG	3 cut(s)	1098, 1551, 1647
BseNI	ACTGG	3 cut(s)	735, 1103, 1150
BseRI	GAGGAG	2 cut(s)	443, 933
BseXI	GCAGC	5 cut(s)	178, 235, 257, 718, 942
BseYI	CCCAGC	1 cut(s)	1283
Bsh1285I	CGRYCG	1 cut(s)	1961
BshFI	GGCC	2 cut(s)	642, 1785
BshNI	GGYRCC	2 cut(s)	1436, 1910
BshVI	ATCGAT	2 cut(s)	669, 1957
BsiEI	CGRYCG	1 cut(s)	1961
BsiHKAI	GWGCWC	1 cut(s)	1721
BsiHKCI	CYCGRG	1 cut(s)	662
BslFI	GGGAC	1 cut(s)	526
BslI	CCNNNNNNNGG	8 cut(s)	509, 727, 854, 882, 1135, 1285, 1795, 2078
BsmAI	GTCTC	5 cut(s)	493, 1531, 1558, 1597, 1652
BsmFI	GGGAC	1 cut(s)	526
BsnI	GGCC	2 cut(s)	642, 1785
Bso31I	GGTCTC	3 cut(s)	493, 1558, 1652
BsoBI	CYCGRG	1 cut(s)	662
Bsp1286I	GDGCHC	1 cut(s)	1721
Bsp143I	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
BspACI	CCGC	5 cut(s)	270, 425, 1136, 1434, 1614
BspANI	GGCC	2 cut(s)	642, 1785
BspCNI	CTCAG	3 cut(s)	1097, 1552, 1648
BspDI	ATCGAT	2 cut(s)	669, 1957
BspLI	GGNNCC	5 cut(s)	47, 1079, 1438, 1786, 1912
BspMAI	CTGCAG	1 cut(s)	652
BspPI	GGATC	3 cut(s)	720, 1040, 1962
BspT107I	GGYRCC	2 cut(s)	1436, 1910
BspTNI	GGTCTC	3 cut(s)	493, 1558, 1652
BsrDI	GCAATG	1 cut(s)	478
BsrI	ACTGG	3 cut(s)	735, 1103, 1150
BssECI	CCNNGG	7 cut(s)	89, 1209, 1789, 1914, 1915, 1950, 2084
BssMI	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
BssNAI	GTATAC	1 cut(s)	1806
BssNI	GRCGYC	1 cut(s)	1911
BssT1I	CCWWGG	3 cut(s)	1209, 1789, 1950
Bst1107I	GTATAC	1 cut(s)	1806
Bst2UI	CCWGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
Bst4CI	ACNGT	5 cut(s)	1228, 1446, 1472, 1710, 1810
Bst6I	CTCTTC	4 cut(s)	166, 491, 561, 885
BstACI	GRCGYC	1 cut(s)	1911
BstC8I	GCNNGC	4 cut(s)	328, 644, 648, 941
BstDEI	CTNAG	6 cut(s)	1084, 1316, 1560, 1631, 1656, 1889
BstENI	CCTNNNNNAGG	3 cut(s)	725, 1793, 2076
BstF5I	GGATG	2 cut(s)	120, 1476
BstH2I	RGCGCY	1 cut(s)	1914
BstHHI	GCGC	3 cut(s)	16, 471, 1913
BstKTI	GATC	7 cut(s)	669, 715, 1048, 1374, 1886, 1957, 1961
BstMAI	GTCTC	5 cut(s)	493, 1531, 1558, 1597, 1652
BstMBI	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
BstMCI	CGRYCG	1 cut(s)	1961
BstMWI	GCNNNNNNNGC	2 cut(s)	936, 2068
BstNI	CCWGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
BstNSI	RCATGY	3 cut(s)	20, 1696, 1818
BstSCI	CCNGG	7 cut(s)	88, 756, 847, 943, 1914, 2071, 2083
BstSFI	CTRYAG	2 cut(s)	648, 1663
BstV1I	GCAGC	5 cut(s)	178, 235, 257, 718, 942
BstV2I	GAAGAC	3 cut(s)	287, 597, 1927
BstZ17I	GTATAC	1 cut(s)	1806
Bsu15I	ATCGAT	2 cut(s)	669, 1957
BsuI	GTATCC	1 cut(s)	405
BsuRI	GGCC	2 cut(s)	642, 1785
BsuTUI	ATCGAT	2 cut(s)	669, 1957
BtrI	CACGTC	1 cut(s)	1854
BtsCI	GGATG	2 cut(s)	120, 1476
BtsIMutI	CAGTG	2 cut(s)	1477, 1815
Cac8I	GCNNGC	4 cut(s)	328, 644, 648, 941
CaiI	CAGNNNCTG	2 cut(s)	191, 490
CfoI	GCGC	3 cut(s)	16, 471, 1913
Cfr13I	GGNCC	4 cut(s)	979, 1077, 1784, 2081
ClaI	ATCGAT	2 cut(s)	669, 1957
Csp6I	GTAC	3 cut(s)	1070, 1167, 2053
CviAII	CATG	9 cut(s)	17, 181, 242, 350, 844, 1693, 1757, 1815, 2112
CviQI	GTAC	3 cut(s)	1070, 1167, 2053
DdeI	CTNAG	6 cut(s)	1084, 1316, 1560, 1631, 1656, 1889
DinI	GGCGCC	1 cut(s)	1912
DpnI	GATC	7 cut(s)	668, 714, 1047, 1373, 1885, 1956, 1960
DpnII	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
EaeI	YGGCCR	1 cut(s)	640
Eam1104I	CTCTTC	4 cut(s)	166, 491, 561, 885
EarI	CTCTTC	4 cut(s)	166, 491, 561, 885
Ecl136II	GAGCTC	1 cut(s)	1719
Eco130I	CCWWGG	3 cut(s)	1209, 1789, 1950
Eco24I	GRGCYC	1 cut(s)	1721
Eco31I	GGTCTC	3 cut(s)	493, 1558, 1652
Eco47I	GGWCC	3 cut(s)	979, 1077, 2081
Eco53kI	GAGCTC	1 cut(s)	1719
Eco57I	CTGAAG	1 cut(s)	316
Eco88I	CYCGRG	1 cut(s)	662
EcoICRI	GAGCTC	1 cut(s)	1719
EcoNI	CCTNNNNNAGG	3 cut(s)	725, 1793, 2076
EcoO109I	RGGNCCY	2 cut(s)	1077, 2081
EcoRI	GAATTC	1 cut(s)	1249
EcoRII	CCWGG	7 cut(s)	88, 756, 847, 943, 1914, 2071, 2083
EcoT14I	CCWWGG	3 cut(s)	1209, 1789, 1950
EcoT22I	ATGCAT	1 cut(s)	624
EcoT38I	GRGCYC	1 cut(s)	1721
EgeI	GGCGCC	1 cut(s)	1912
EheI	GGCGCC	1 cut(s)	1912
ErhI	CCWWGG	3 cut(s)	1209, 1789, 1950
FaeI	CATG	9 cut(s)	20, 184, 245, 353, 847, 1696, 1760, 1818, 2115
FalI	AAGNNNNNCTT	6 cut(s)	33, 65, 558, 590, 2051, 2083
FaqI	GGGAC	1 cut(s)	526
FatI	CATG	9 cut(s)	16, 180, 241, 349, 843, 1692, 1756, 1814, 2111
FauNDI	CATATG	1 cut(s)	1516
FblI	GTMKAC	2 cut(s)	825, 1805
Fnu4HI	GCNGC	6 cut(s)	192, 246, 249, 732, 931, 1137
FokI	GGATG	2 cut(s)	127, 1463
FriOI	GRGCYC	1 cut(s)	1721
Fsp4HI	GCNGC	6 cut(s)	192, 246, 249, 732, 931, 1137
FspBI	CTAG	2 cut(s)	1503, 1761
FspI	TGCGCA	1 cut(s)	470
GlaI	GCGC	3 cut(s)	15, 470, 1912
GluI	GCNGC	6 cut(s)	192, 246, 249, 732, 931, 1137
GsaI	CCCAGC	1 cut(s)	1287
GsuI	CTGGAG	2 cut(s)	512, 966
HaeII	RGCGCY	1 cut(s)	1914
HaeIII	GGCC	2 cut(s)	642, 1785
HhaI	GCGC	3 cut(s)	16, 471, 1913
Hin1I	GRCGYC	1 cut(s)	1911
Hin1II	CATG	9 cut(s)	20, 184, 245, 353, 847, 1696, 1760, 1818, 2115
Hin6I	GCGC	3 cut(s)	14, 469, 1911
HinP1I	GCGC	3 cut(s)	14, 469, 1911
HincII	GTYRAC	2 cut(s)	826, 1276
HindII	GTYRAC	2 cut(s)	826, 1276
HindIII	AAGCTT	3 cut(s)	229, 818, 1725
HphI	GGTGA	5 cut(s)	643, 1148, 1160, 1394, 1810
Hpy166II	GTNNAC	4 cut(s)	826, 1070, 1276, 1806
Hpy188III	TCNNGA	9 cut(s)	404, 491, 662, 664, 884, 977, 1059, 1415, 1580
Hpy8I	GTNNAC	4 cut(s)	826, 1070, 1276, 1806
HpyAV	CCTTC	9 cut(s)	95, 290, 755, 788, 1026, 1068, 1082, 1789, 1872
HpyCH4III	ACNGT	5 cut(s)	1228, 1446, 1472, 1710, 1810
HpyCH4IV	ACGT	2 cut(s)	1853, 1932
HpyF10VI	GCNNNNNNNGC	2 cut(s)	936, 2068
HpyF3I	CTNAG	6 cut(s)	1084, 1316, 1560, 1631, 1656, 1889
HpySE526I	ACGT	2 cut(s)	1853, 1932
Hsp92I	GRCGYC	1 cut(s)	1911
Hsp92II	CATG	9 cut(s)	20, 184, 245, 353, 847, 1696, 1760, 1818, 2115
HspAI	GCGC	3 cut(s)	14, 469, 1911
KasI	GGCGCC	1 cut(s)	1910
Kzo9I	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
LmnI	GCTCC	5 cut(s)	45, 75, 952, 1306, 1716
Lsp1109I	GCAGC	5 cut(s)	178, 235, 257, 718, 942
LweI	GCATC	5 cut(s)	178, 561, 609, 1123, 1564
MaeI	CTAG	2 cut(s)	1503, 1761
MaeII	ACGT	2 cut(s)	1853, 1932
MaeIII	GTNAC	7 cut(s)	1154, 1446, 1704, 1710, 1810, 1817, 1979
MalI	GATC	7 cut(s)	668, 714, 1047, 1373, 1885, 1956, 1960
MboI	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
MhlI	GDGCHC	1 cut(s)	1721
MlsI	TGGCCA	1 cut(s)	642
MluNI	TGGCCA	1 cut(s)	642
Mly113I	GGCGCC	1 cut(s)	1911
MlyI	GAGTC	5 cut(s)	1108, 1565, 1655, 1727, 2052
MmeI	TCCRAC	2 cut(s)	1328, 2020
Mox20I	TGGCCA	1 cut(s)	642
Mph1103I	ATGCAT	1 cut(s)	624
MroXI	GAANNNNTTC	1 cut(s)	972
MscI	TGGCCA	1 cut(s)	642
MseI	TTAA	9 cut(s)	63, 227, 480, 677, 740, 860, 1359, 1464, 1844
MslI	CAYNNNNRTG	1 cut(s)	993
Msp20I	TGGCCA	1 cut(s)	642
MspA1I	CMGCKG	1 cut(s)	248
MspR9I	CCNGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
MvaI	CCWGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
MwoI	GCNNNNNNNGC	2 cut(s)	936, 2068
NarI	GGCGCC	1 cut(s)	1911
NdeI	CATATG	1 cut(s)	1516
NdeII	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
NlaIII	CATG	9 cut(s)	20, 184, 245, 353, 847, 1696, 1760, 1818, 2115
NlaIV	GGNNCC	5 cut(s)	47, 1079, 1438, 1786, 1912
NmuCI	GTSAC	4 cut(s)	1154, 1704, 1710, 1810
NsbI	TGCGCA	1 cut(s)	470
NsiI	ATGCAT	1 cut(s)	624
NspI	RCATGY	3 cut(s)	20, 1696, 1818
PaeR7I	CTCGAG	1 cut(s)	662
PasI	CCCWGGG	1 cut(s)	1915
PciI	ACATGT	1 cut(s)	1814
PdmI	GAANNNNTTC	1 cut(s)	972
PflFI	GACNNNGTC	1 cut(s)	1472
PfoI	TCCNGGA	1 cut(s)	756
PkrI	GCNGC	6 cut(s)	193, 247, 250, 733, 932, 1138
Ple19I	CGATCG	1 cut(s)	1961
PleI	GAGTC	5 cut(s)	1107, 1564, 1654, 1727, 2051
PluTI	GGCGCC	1 cut(s)	1914
PpsI	GAGTC	5 cut(s)	1107, 1564, 1654, 1727, 2051
PpuMI	RGGWCCY	2 cut(s)	1077, 2081
PscI	ACATGT	1 cut(s)	1814
Psp124BI	GAGCTC	1 cut(s)	1721
Psp5II	RGGWCCY	2 cut(s)	1077, 2081
Psp6I	CCWGG	7 cut(s)	88, 756, 847, 943, 1914, 2071, 2083
PspFI	CCCAGC	1 cut(s)	1283
PspGI	CCWGG	7 cut(s)	88, 756, 847, 943, 1914, 2071, 2083
PspN4I	GGNNCC	5 cut(s)	47, 1079, 1438, 1786, 1912
PspPI	GGNCC	4 cut(s)	979, 1077, 1784, 2081
PspPPI	RGGWCCY	2 cut(s)	1077, 2081
PstI	CTGCAG	1 cut(s)	652
PstNI	CAGNNNCTG	2 cut(s)	191, 490
PsyI	GACNNNGTC	1 cut(s)	1472
PvuI	CGATCG	1 cut(s)	1961
PvuII	CAGCTG	1 cut(s)	248
RsaI	GTAC	3 cut(s)	1071, 1168, 2054
RsaNI	GTAC	3 cut(s)	1070, 1167, 2053
RseI	CAYNNNNRTG	1 cut(s)	993
SacI	GAGCTC	1 cut(s)	1721
SalI	GTCGAC	1 cut(s)	824
SaqAI	TTAA	9 cut(s)	63, 227, 480, 677, 740, 860, 1359, 1464, 1844
SatI	GCNGC	6 cut(s)	192, 246, 249, 732, 931, 1137
Sau3AI	GATC	7 cut(s)	666, 712, 1045, 1371, 1883, 1954, 1958
Sau96I	GGNCC	4 cut(s)	979, 1077, 1784, 2081
SchI	GAGTC	5 cut(s)	1108, 1565, 1655, 1727, 2052
ScrFI	CCNGG	7 cut(s)	90, 758, 849, 945, 1916, 2073, 2085
SduI	GDGCHC	1 cut(s)	1721
SfaNI	GCATC	5 cut(s)	178, 561, 609, 1123, 1564
SfcI	CTRYAG	2 cut(s)	648, 1663
SfoI	GGCGCC	1 cut(s)	1912
Sfr274I	CTCGAG	1 cut(s)	662
SinI	GGWCC	3 cut(s)	979, 1077, 2081
SlaI	CTCGAG	1 cut(s)	662
SmiMI	CAYNNNNRTG	1 cut(s)	993
SmlI	CTYRAG	4 cut(s)	662, 788, 1331, 1722
SmoI	CTYRAG	4 cut(s)	662, 788, 1331, 1722
SpeI	ACTAGT	1 cut(s)	1502
SsiI	CCGC	5 cut(s)	270, 425, 1136, 1434, 1614
SspDI	GGCGCC	1 cut(s)	1910
SspMI	CTAG	2 cut(s)	1503, 1761
SstI	GAGCTC	1 cut(s)	1721
StyD4I	CCNGG	7 cut(s)	88, 756, 847, 943, 1914, 2071, 2083
StyI	CCWWGG	3 cut(s)	1209, 1789, 1950
TaaI	ACNGT	5 cut(s)	1228, 1446, 1472, 1710, 1810
TaiI	ACGT	2 cut(s)	1856, 1935
TaqI	TCGA	9 cut(s)	142, 169, 384, 663, 669, 825, 1247, 1406, 1957
TatI	WGTACW	1 cut(s)	2052
TauI	GCSGC	1 cut(s)	1139
Tru1I	TTAA	9 cut(s)	63, 227, 480, 677, 740, 860, 1359, 1464, 1844
Tru9I	TTAA	9 cut(s)	63, 227, 480, 677, 740, 860, 1359, 1464, 1844
TscAI	CASTG	2 cut(s)	1477, 1815
TseFI	GTSAC	4 cut(s)	1154, 1704, 1710, 1810
TseI	GCWGC	5 cut(s)	191, 245, 248, 731, 930
Tsp45I	GTSAC	4 cut(s)	1154, 1704, 1710, 1810
TspDTI	ATGAA	8 cut(s)	11, 338, 344, 981, 1008, 1053, 1509, 1745
TspGWI	ACGGA	2 cut(s)	49, 1729
TspRI	CASTG	2 cut(s)	1477, 1815
Tth111I	GACNNNGTC	1 cut(s)	1472
VpaK11BI	GGWCC	3 cut(s)	979, 1077, 2081
XagI	CCTNNNNNAGG	3 cut(s)	725, 1793, 2076
XapI	RAATTY	6 cut(s)	108, 386, 1006, 1114, 1216, 1249
XceI	RCATGY	3 cut(s)	20, 1696, 1818
XhoI	CTCGAG	1 cut(s)	662
XmiI	GTMKAC	2 cut(s)	825, 1805
XmnI	GAANNNNTTC	1 cut(s)	972
XspI	CTAG	2 cut(s)	1503, 1761
Zsp2I	ATGCAT	1 cut(s)	624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.