AT4G33300

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0009528
Physical Location & Seq
Reverse (-)
16050456 .. 16056526
6071 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G33300.1

Sequence Viewer

Length: 2451 bp
ATGGCCATCACCGATTTTTTCGCCGGTGAAATTGCGACGGAGCTCCTGAAGCAGCTCTTTACGATATCTACAACGGCGTGGAGATACAAAAACACCGCCAAACAACTCCTCACCTTGATCGATAGCATTCGACCGACGATCAAGGAGATTCAATACAGCGGCGTGGAGCTTCCTGCTCACCGCCAAGCTCAAATCGGTATGCTCTTCGATACTTTAGAGAAAGGCAAGAAGCTCACTGACAAAGTCCTTAGCTCTAAGCGATGGAATTTATATCGACAGCTAACCCTAGCCAGAAAAATGGAGAAGCTAGAGAAGACCATCTCTAATTTCCTTAAAAATGAGGTCTTTACACATATCCTCGCTGACGTTCATCATCTCCGGGCCGATACCAGTGTGCGTTTGGATCGGGTTGACATGAGCCTCGACAGGGTGATTCAGCAAGTGGGTTCCATGAAAATTGGGGGAGGTGGCTTGATATCAGAGGCCATGAAGAGAGCCGAGGCTATGGAGATTGAGACCAACGACGATTCGGAGAAATTTGGGGTTGGATTGGAATTGGGAAAGGTTAAGGTTAAGAAGATGATGTTCGAATCTCAAGGAGGGGTTTTTGGGATCAGTGGAATGGGCGGTGTTGGTAAAACCACTCTTGCCAAAGAACTTCAACGGGACCATGAAGTCCAATGTCACTTTGAGAACCGGATTTTGTTTCTGACTGTATCACAATCTCCGCTTCTTGAGGAGCTGAGGGAACTTATATGGGGTTTCTTATCTGGTTGTGAAGCTGGAAATCCTGTTCCTGACTGTAATTTTCCGTTTGATGGCGCGCGTAAGCTCGTGATTCTTGATGATGTTTGGACCACACAGGCCCTGGACCGCTTGACCTCGTTTAAGTTTCCTGGTTGCACAACTCTTGTGGTCTCACGATCCAAACTCACTGAGCCTAAATTCACTTATGATGTCGAAGTACTGAGTGAAGATGAAGCAATCTCTCTCTTCTGTCTCTGTGCTTTCGGTCAGAAATCTATCCCTCTTGGTTTCTGCAAAGATCTGGTTAAGCAGGTTGCTAATGAATGTAAAGGGCTTCCTTTAGCTCTCAAAGTCACGGGTGCTTCATTAAATGGCAAACCTGAAATGTACTGGAAGGGCGTATTGCAGAGGTTATCAAAAGGTGAACCTGCTGATGACTCTCACGAGAGTAGATTGCTTCGTCAAATGGAAGCTAGTCTAGACAATCTCGACCAGACGACCAAAGATTGTTTCTTGGATCTTGGCGCCTTCCCTGAAGACAGGAAGATTCCTCTTGATGTTCTCATCAACATTTGGATTGAGTTACATGATATAGATGAAGGAAATGCTTTTGCCATCCTTGTTGATTTGTCACACAAGAATCTCCTTACTCTTGGGAAGGATCCACGGCTTGGCTCTTTGTACGCAAGCCACTATGATATATTTGTGACACAGCATGATGTTCTGCGAGACCTAGCTCTTCATTTAAGCAATGCAGGGAAAGTAAACAGAAGAAAGCGGTTGCTGATGCCGAAAAGAGAGTTAGATCTTCCAGGAGATTGGGAAAGGAACAATGATGAGCATTACATTGCCCAGATTGTCTCTATTCATACTGGGGAAATGAATGAAATGCAATGGTTTGACATGGAGTTCCCCAAGGCAGAGATTCTAATATTGAACTTCTCTTCAGACAAGTATGTTCTTCCGCCTTTTATCAGTAAGATGAGCCGGCTTAAGGTCCTAGTGATTATCAACAACGGCATGTCTCCCGCGGTTCTCCATGACTTTTCAATATTTGCTCATTTGTCGAAACTAAGAAGTCTCTGGCTAGAGAGGGTTCACGTCCCTCAACTCTCCAACTCAACCACCCCCTTGAAAAATCTCCACAAGATGTCTTTGATTCTGTGCAAGATCAATAAAAGTTTTGATCAAACCGGACTTGACGTGGCAGATATCTTCCCAAAATTGGGCGATCTGACAATAGATCACTGTGATGATCTCGTGGCACTACCTTCAAGCATTTGCGGACTGACCTCCCTTAGCTGCTTAAGCATAACAAATTGTCCACGCCTCGGTGAATTGCCCAAGAACCTCAGTAAGCTACAAGCTCTCGAAATCTTAAGGCTATATGCTTGCCCTGAGCTAAAGACATTACCTGGAGAAATATGTGAGCTTCCTGGGCTTAAGTATCTCGACATCTCACAATGTGTCAGCCTGAGTTGTCTTCCAGAGGAAATAGGAAAGCTAAAGAAGCTTGAGAAGATCGACATGAGAGAATGTTGCTTCTCGGATAGACCGAGCTCTGCTGTTTCACTGAAGTCTCTGCGCCATGTAATCTGCGATACCGACGTTGCATTTATGTGGGAAGAAGTTGAGAAGGCTGTTCCAGGGTTAAAGATCGAAGCTGCTGAGAAATGCTTCAGCCTAGACTGGCTTGACGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0042742 GO:0043207 GO:0048046 GO:0050896 GO:0051704 GO:0051707 GO:0098542
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC RPW8

Protein Analysis

816

Amino Acids

91.82

Weight (kDa)

5.93

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RPW8 PF05659 9 - 129 1.1e-10 Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC PF00931 190 - 340 3.2e-17 NB-ARC domain
LRR_Zer-1 PF25013 678 - 741 2.7e-06 Zer-1-like, Leucine-rich repeats
LRR_14 PF23598 723 - 786 8.6e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 674
Acc36I ACCTGC 2 cut(s) 1048, 1183
AccB1I GGYRCC 1 cut(s) 1271
AccB7I CCANNNNNTGG 1 cut(s) 1418
AccII CGCG 3 cut(s) 824, 826, 1778
AclWI GGATC 6 cut(s) 411, 620, 918, 1272, 1403, 1416
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 265, 536, 944
AcuI CTGAAG 5 cut(s) 68, 1302, 1677, 2342, 2410
AcyI GRCGYC 1 cut(s) 1272
AdeI CACNNNGTG 1 cut(s) 2213
AfaI GTAC 3 cut(s) 966, 1136, 1430
AfiI CCNNNNNNNGG 7 cut(s) 427, 818, 1418, 1741, 1972, 1973, 2078
AflII CTTAAG 4 cut(s) 1739, 2053, 2125, 2189
AgsI TTSAA 6 cut(s) 152, 662, 1684, 1797, 1882, 2022
AjiI CACGTC 2 cut(s) 1849, 1951
AjnI CCWGG 6 cut(s) 867, 895, 1558, 2161, 2182, 2392
AjuI GAANNNNNNNTTGG 2 cut(s) 1241, 1273
AloI GAACNNNNNNTCC 2 cut(s) 777, 809
Alw21I GWGCWC 2 cut(s) 45, 2309
Alw26I GTCTC 8 cut(s) 509, 922, 1004, 1470, 1612, 1776, 1832, 2331
AlwI GGATC 6 cut(s) 411, 620, 918, 1272, 1403, 1416
AlwNI CAGNNNCTG 1 cut(s) 868
AoxI GGCC 4 cut(s) 3, 381, 483, 864
ApeKI GCWGC 3 cut(s) 52, 2049, 2411
ApoI RAATTY 3 cut(s) 265, 536, 944
Asp700I GAANNNNTTC 1 cut(s) 2423
AspLEI GCGC 4 cut(s) 824, 826, 1274, 2334
AspS9I GGNCC 6 cut(s) 381, 667, 855, 865, 871, 1744
AsuC2I CCSGG 1 cut(s) 380
AsuHPI GGTGA 6 cut(s) 38, 103, 170, 442, 1181, 2093
AsuII TTCGAA 1 cut(s) 588
AvaII GGWCC 4 cut(s) 667, 855, 871, 1744
BaeI ACNNNNGTAYC 4 cut(s) 378, 411, 2340, 2373
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1408
BanI GGYRCC 1 cut(s) 1271
BanII GRGCYC 2 cut(s) 45, 2309
BauI CACGAG 3 cut(s) 833, 1190, 2006
BbsI GAAGAC 3 cut(s) 320, 1290, 2222
Bbv12I GWGCWC 2 cut(s) 45, 2309
BbvCI CCTCAGC 1 cut(s) 743
BbvI GCAGC 3 cut(s) 64, 2036, 2398
BccI CCATC 5 cut(s) 14, 255, 326, 812, 1370
BceAI ACGGC 3 cut(s) 90, 1430, 1780
BciT130I CCWGG 6 cut(s) 869, 897, 1560, 2163, 2184, 2394
BclI TGATCA 1 cut(s) 1933
BcnI CCSGG 1 cut(s) 380
BcoDI GTCTC 8 cut(s) 509, 922, 1004, 1470, 1612, 1776, 1832, 2331
BfaI CTAG 8 cut(s) 287, 308, 1221, 1226, 1481, 1748, 1835, 2432
BfoI RGCGCY 1 cut(s) 1275
BfrI CTTAAG 4 cut(s) 1739, 2053, 2125, 2189
BfuAI ACCTGC 2 cut(s) 1048, 1183
BglII AGATCT 2 cut(s) 1045, 1552
BisI GCNGC 4 cut(s) 53, 160, 2050, 2412
BlsI GCNGC 4 cut(s) 54, 161, 2051, 2413
BmcAI AGTACT 1 cut(s) 966
Bme1390I CCNGG 7 cut(s) 380, 869, 897, 1560, 2163, 2184, 2394
Bme18I GGWCC 4 cut(s) 667, 855, 871, 1744
BmgBI CACGTC 2 cut(s) 1849, 1951
BmgT120I GGNCC 6 cut(s) 381, 667, 855, 865, 871, 1744
BmiI GGNNCC 4 cut(s) 448, 668, 1273, 1410
BmrFI CCNGG 7 cut(s) 380, 869, 897, 1560, 2163, 2184, 2394
BmrI ACTGGG 1 cut(s) 1629
BmsI GCATC 1 cut(s) 1524
BmuI ACTGGG 1 cut(s) 1629
BpiI GAAGAC 3 cut(s) 320, 1290, 2222
BpmI CTGGAG 1 cut(s) 2184
Bpu10I CCTNAGC 4 cut(s) 248, 743, 2045, 2145
Bpu14I TTCGAA 1 cut(s) 588
BpuEI CTTGAG 3 cut(s) 579, 755, 2282
BpuMI CCSGG 1 cut(s) 380
Bsa29I ATCGAT 1 cut(s) 120
BsaHI GRCGYC 1 cut(s) 1272
BsaI GGTCTC 3 cut(s) 509, 922, 1470
BsaJI CCNNGG 8 cut(s) 498, 867, 1412, 1662, 1776, 2077, 2183, 2393
BsaWI WCCGGW 2 cut(s) 696, 1940
Bsc4I CCNNNNNNNGG 7 cut(s) 427, 818, 1418, 1741, 1972, 1973, 2078
Bse118I RCCGGY 2 cut(s) 23, 1734
Bse1I ACTGG 4 cut(s) 390, 1142, 1624, 2441
Bse3DI GCAATG 3 cut(s) 1504, 1593, 1646
BseBI CCWGG 6 cut(s) 869, 897, 1560, 2163, 2184, 2394
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 8 cut(s) 498, 867, 1412, 1662, 1776, 2077, 2183, 2393
BseGI GGATG 1 cut(s) 1362
BseLI CCNNNNNNNGG 7 cut(s) 427, 818, 1418, 1741, 1972, 1973, 2078
BseMI GCAATG 3 cut(s) 1504, 1593, 1646
BseMII CTCAG 7 cut(s) 734, 927, 959, 2113, 2136, 2213, 2406
BseNI ACTGG 4 cut(s) 390, 1142, 1624, 2441
BsePI GCGCGC 1 cut(s) 822
BseRI GAGGAG 2 cut(s) 98, 752
BseXI GCAGC 3 cut(s) 64, 2036, 2398
Bsh1236I CGCG 3 cut(s) 824, 826, 1778
Bsh1285I CGRYCG 1 cut(s) 134
BshFI GGCC 4 cut(s) 5, 383, 485, 866
BshNI GGYRCC 1 cut(s) 1271
BshVI ATCGAT 1 cut(s) 120
BsiEI CGRYCG 1 cut(s) 134
BsiHKAI GWGCWC 2 cut(s) 45, 2309
BsiSI CCGG 5 cut(s) 24, 379, 697, 1735, 1941
BslFI GGGAC 2 cut(s) 680, 1835
BslI CCNNNNNNNGG 7 cut(s) 427, 818, 1418, 1741, 1972, 1973, 2078
BsmAI GTCTC 8 cut(s) 509, 922, 1004, 1470, 1612, 1776, 1832, 2331
BsmFI GGGAC 2 cut(s) 680, 1835
BsmI GAATGC 1 cut(s) 126
BsnI GGCC 4 cut(s) 5, 383, 485, 866
Bso31I GGTCTC 3 cut(s) 509, 922, 1470
Bsp119I TTCGAA 1 cut(s) 588
Bsp1286I GDGCHC 2 cut(s) 45, 2309
BspANI GGCC 4 cut(s) 5, 383, 485, 866
BspCNI CTCAG 7 cut(s) 735, 928, 960, 2112, 2137, 2214, 2407
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 3 cut(s) 824, 826, 1778
BspLI GGNNCC 4 cut(s) 448, 668, 1273, 1410
BspMI ACCTGC 2 cut(s) 1048, 1183
BspPI GGATC 6 cut(s) 411, 620, 918, 1272, 1403, 1416
BspQI GCTCTTC 2 cut(s) 209, 1491
BspT104I TTCGAA 1 cut(s) 588
BspT107I GGYRCC 1 cut(s) 1271
BspTI CTTAAG 4 cut(s) 1739, 2053, 2125, 2189
BspTNI GGTCTC 3 cut(s) 509, 922, 1470
BsrDI GCAATG 3 cut(s) 1504, 1593, 1646
BsrFI RCCGGY 2 cut(s) 23, 1734
BsrI ACTGG 4 cut(s) 390, 1142, 1624, 2441
BssAI RCCGGY 2 cut(s) 23, 1734
BssECI CCNNGG 8 cut(s) 498, 867, 1412, 1662, 1776, 2077, 2183, 2393
BssHII GCGCGC 1 cut(s) 822
BssNI GRCGYC 1 cut(s) 1272
BssSI CACGAG 3 cut(s) 833, 1190, 2006
BssT1I CCWWGG 1 cut(s) 1662
Bst2BI CACGAG 3 cut(s) 833, 1190, 2006
Bst2UI CCWGG 6 cut(s) 869, 897, 1560, 2163, 2184, 2394
Bst4CI ACNGT 3 cut(s) 715, 803, 1997
Bst6I CTCTTC 5 cut(s) 209, 485, 998, 1491, 1696
BstACI GRCGYC 1 cut(s) 1272
BstAFI CTTAAG 4 cut(s) 1739, 2053, 2125, 2189
BstBI TTCGAA 1 cut(s) 588
BstC8I GCNNGC 4 cut(s) 824, 1435, 1736, 2140
BstDSI CCRYGG 2 cut(s) 1412, 1776
BstF5I GGATG 1 cut(s) 1362
BstFNI CGCG 3 cut(s) 824, 826, 1778
BstH2I RGCGCY 1 cut(s) 1275
BstHHI GCGC 4 cut(s) 824, 826, 1274, 2334
BstMAI GTCTC 8 cut(s) 509, 922, 1004, 1470, 1612, 1776, 1832, 2331
BstMCI CGRYCG 1 cut(s) 134
BstMWI GCNNNNNNNGC 4 cut(s) 49, 2055, 2185, 2257
BstNI CCWGG 6 cut(s) 869, 897, 1560, 2163, 2184, 2394
BstNSI RCATGY 1 cut(s) 1771
BstSCI CCNGG 7 cut(s) 378, 867, 895, 1558, 2161, 2182, 2392
BstUI CGCG 3 cut(s) 824, 826, 1778
BstV1I GCAGC 3 cut(s) 64, 2036, 2398
BstV2I GAAGAC 3 cut(s) 320, 1290, 2222
BstX2I RGATCY 4 cut(s) 1045, 1264, 1408, 1552
BstXI CCANNNNNNTGG 2 cut(s) 298, 1566
BstYI RGATCY 4 cut(s) 1045, 1264, 1408, 1552
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 4 cut(s) 5, 383, 485, 866
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 2 cut(s) 1412, 1776
BtgZI GCGATG 1 cut(s) 274
BtrI CACGTC 2 cut(s) 1849, 1951
BtsCI GGATG 1 cut(s) 1362
BtsIMutI CAGTG 6 cut(s) 234, 397, 622, 933, 1993, 2318
BveI ACCTGC 2 cut(s) 1048, 1183
Cac8I GCNNGC 4 cut(s) 824, 1435, 1736, 2140
CaiI CAGNNNCTG 1 cut(s) 868
CfoI GCGC 4 cut(s) 824, 826, 1274, 2334
Cfr10I RCCGGY 2 cut(s) 23, 1734
Cfr13I GGNCC 6 cut(s) 381, 667, 855, 865, 871, 1744
Cfr42I CCGCGG 1 cut(s) 1779
ClaI ATCGAT 1 cut(s) 120
Csp6I GTAC 3 cut(s) 965, 1135, 1429
CspCI CAANNNNNGTGG 2 cut(s) 894, 929
CviQI GTAC 3 cut(s) 965, 1135, 1429
DinI GGCGCC 1 cut(s) 1273
DraIII CACNNNGTG 1 cut(s) 2213
DrdI GACNNNNNNGTC 1 cut(s) 674
DseDI GACNNNNNNGTC 1 cut(s) 674
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 5 cut(s) 209, 485, 998, 1491, 1696
EarI CTCTTC 5 cut(s) 209, 485, 998, 1491, 1696
EciI GGCGGA 1 cut(s) 1701
Ecl136II GAGCTC 2 cut(s) 43, 2307
Eco130I CCWWGG 1 cut(s) 1662
Eco24I GRGCYC 2 cut(s) 45, 2309
Eco31I GGTCTC 3 cut(s) 509, 922, 1470
Eco32I GATATC 3 cut(s) 66, 477, 1960
Eco47I GGWCC 4 cut(s) 667, 855, 871, 1744
Eco53kI GAGCTC 2 cut(s) 43, 2307
Eco57I CTGAAG 5 cut(s) 68, 1302, 1677, 2342, 2410
EcoICRI GAGCTC 2 cut(s) 43, 2307
EcoO109I RGGNCCY 2 cut(s) 865, 1744
EcoRII CCWGG 6 cut(s) 867, 895, 1558, 2161, 2182, 2392
EcoRV GATATC 3 cut(s) 66, 477, 1960
EcoT14I CCWWGG 1 cut(s) 1662
EcoT38I GRGCYC 2 cut(s) 45, 2309
EgeI GGCGCC 1 cut(s) 1273
EheI GGCGCC 1 cut(s) 1273
ErhI CCWWGG 1 cut(s) 1662
FalI AAGNNNNNCTT 2 cut(s) 41, 73
FaqI GGGAC 2 cut(s) 680, 1835
FauI CCCGC 1 cut(s) 1783
FbaI TGATCA 1 cut(s) 1933
Fnu4HI GCNGC 4 cut(s) 53, 160, 2050, 2412
FokI GGATG 1 cut(s) 1349
FriOI GRGCYC 2 cut(s) 45, 2309
Fsp4HI GCNGC 4 cut(s) 53, 160, 2050, 2412
FspBI CTAG 8 cut(s) 287, 308, 1221, 1226, 1481, 1748, 1835, 2432
GlaI GCGC 4 cut(s) 823, 825, 1273, 2333
GluI GCNGC 4 cut(s) 53, 160, 2050, 2412
GsuI CTGGAG 1 cut(s) 2184
HaeII RGCGCY 1 cut(s) 1275
HaeIII GGCC 4 cut(s) 5, 383, 485, 866
HapII CCGG 5 cut(s) 24, 379, 697, 1735, 1941
HhaI GCGC 4 cut(s) 824, 826, 1274, 2334
Hin1I GRCGYC 1 cut(s) 1272
Hin6I GCGC 4 cut(s) 822, 824, 1272, 2332
HinP1I GCGC 4 cut(s) 822, 824, 1272, 2332
HincII GTYRAC 1 cut(s) 412
HindII GTYRAC 1 cut(s) 412
HindIII AAGCTT 1 cut(s) 2258
HpaII CCGG 5 cut(s) 24, 379, 697, 1735, 1941
HphI GGTGA 6 cut(s) 38, 103, 170, 442, 1181, 2093
Hpy166II GTNNAC 5 cut(s) 412, 1172, 1513, 1846, 2072
Hpy188I TCNGA 7 cut(s) 481, 532, 711, 1017, 1696, 1983, 2296
Hpy8I GTNNAC 5 cut(s) 412, 1172, 1513, 1846, 2072
Hpy99I CGWCG 4 cut(s) 40, 139, 527, 2357
HpyAV CCTTC 6 cut(s) 1135, 1285, 1340, 1399, 2028, 2377
HpyCH4III ACNGT 3 cut(s) 715, 803, 1997
HpyCH4IV ACGT 4 cut(s) 366, 1848, 1950, 2355
HpyCH4V TGCA 7 cut(s) 903, 1041, 1153, 1502, 1639, 1914, 2360
HpyF10VI GCNNNNNNNGC 4 cut(s) 49, 2055, 2185, 2257
HpySE526I ACGT 4 cut(s) 366, 1848, 1950, 2355
Hsp92I GRCGYC 1 cut(s) 1272
HspAI GCGC 4 cut(s) 822, 824, 1272, 2332
KasI GGCGCC 1 cut(s) 1271
KroI GCCGGC 1 cut(s) 1734
KroNI GCCGGC 1 cut(s) 1736
Ksp22I TGATCA 1 cut(s) 1933
KspI CCGCGG 1 cut(s) 1779
LguI GCTCTTC 2 cut(s) 209, 1491
LmnI GCTCC 4 cut(s) 40, 48, 166, 739
Lsp1109I GCAGC 3 cut(s) 64, 2036, 2398
LweI GCATC 1 cut(s) 1524
MaeI CTAG 8 cut(s) 287, 308, 1221, 1226, 1481, 1748, 1835, 2432
MaeII ACGT 4 cut(s) 366, 1848, 1950, 2355
MaeIII GTNAC 5 cut(s) 683, 1099, 1329, 1377, 1453
MflI RGATCY 4 cut(s) 1045, 1264, 1408, 1552
MhlI GDGCHC 2 cut(s) 45, 2309
MlsI TGGCCA 1 cut(s) 5
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 1272
MlyI GAGTC 1 cut(s) 1178
MmeI TCCRAC 2 cut(s) 526, 1887
Mox20I TGGCCA 1 cut(s) 5
MroNI GCCGGC 1 cut(s) 1734
MroXI GAANNNNTTC 1 cut(s) 2423
MscI TGGCCA 1 cut(s) 5
MslI CAYNNNNRTG 2 cut(s) 1998, 2365
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 2 cut(s) 159, 1778
MspCI CTTAAG 4 cut(s) 1739, 2053, 2125, 2189
MspI CCGG 5 cut(s) 24, 379, 697, 1735, 1941
MspR9I CCNGG 7 cut(s) 380, 869, 897, 1560, 2163, 2184, 2394
Mva1269I GAATGC 1 cut(s) 126
MvaI CCWGG 6 cut(s) 869, 897, 1560, 2163, 2184, 2394
MvnI CGCG 3 cut(s) 824, 826, 1778
MwoI GCNNNNNNNGC 4 cut(s) 49, 2055, 2185, 2257
NaeI GCCGGC 1 cut(s) 1736
NarI GGCGCC 1 cut(s) 1272
NciI CCSGG 1 cut(s) 380
NgoMIV GCCGGC 1 cut(s) 1734
NlaIV GGNNCC 4 cut(s) 448, 668, 1273, 1410
NmeAIII GCCGAG 1 cut(s) 523
NmuCI GTSAC 4 cut(s) 683, 1099, 1377, 1453
NspI RCATGY 1 cut(s) 1771
NspV TTCGAA 1 cut(s) 588
PauI GCGCGC 1 cut(s) 822
PciSI GCTCTTC 2 cut(s) 209, 1491
PcsI WCGNNNNNNNCGW 1 cut(s) 2300
PctI GAATGC 1 cut(s) 126
PdiI GCCGGC 1 cut(s) 1736
PdmI GAANNNNTTC 1 cut(s) 2423
PfeI GAWTC 9 cut(s) 148, 433, 527, 590, 838, 1294, 1387, 1672, 1906
PflFI GACNNNGTC 1 cut(s) 242
PflMI CCANNNNNTGG 1 cut(s) 1418
PfoI TCCNGGA 1 cut(s) 1558
PkrI GCNGC 4 cut(s) 54, 161, 2051, 2413
PleI GAGTC 1 cut(s) 1178
PluTI GGCGCC 1 cut(s) 1275
PpsI GAGTC 1 cut(s) 1178
PpuMI RGGWCCY 1 cut(s) 1744
Psp124BI GAGCTC 2 cut(s) 45, 2309
Psp5II RGGWCCY 1 cut(s) 1744
Psp6I CCWGG 6 cut(s) 867, 895, 1558, 2161, 2182, 2392
PspGI CCWGG 6 cut(s) 867, 895, 1558, 2161, 2182, 2392
PspN4I GGNNCC 4 cut(s) 448, 668, 1273, 1410
PspPI GGNCC 6 cut(s) 381, 667, 855, 865, 871, 1744
PspPPI RGGWCCY 1 cut(s) 1744
PstNI CAGNNNCTG 1 cut(s) 868
PsuI RGATCY 4 cut(s) 1045, 1264, 1408, 1552
PsyI GACNNNGTC 1 cut(s) 242
PteI GCGCGC 1 cut(s) 822
RsaI GTAC 3 cut(s) 966, 1136, 1430
RsaNI GTAC 3 cut(s) 965, 1135, 1429
RseI CAYNNNNRTG 2 cut(s) 1998, 2365
SacI GAGCTC 2 cut(s) 45, 2309
SacII CCGCGG 1 cut(s) 1779
SapI GCTCTTC 2 cut(s) 209, 1491
SatI GCNGC 4 cut(s) 53, 160, 2050, 2412
Sau96I GGNCC 6 cut(s) 381, 667, 855, 865, 871, 1744
ScaI AGTACT 1 cut(s) 966
SchI GAGTC 1 cut(s) 1178
ScrFI CCNGG 7 cut(s) 380, 869, 897, 1560, 2163, 2184, 2394
SduI GDGCHC 2 cut(s) 45, 2309
SfaNI GCATC 1 cut(s) 1524
SfoI GGCGCC 1 cut(s) 1273
Sfr303I CCGCGG 1 cut(s) 1779
SfuI TTCGAA 1 cut(s) 588
SgrAI CRCCGGYG 1 cut(s) 23
SgrBI CCGCGG 1 cut(s) 1779
SinI GGWCC 4 cut(s) 667, 855, 871, 1744
SmiMI CAYNNNNRTG 2 cut(s) 1998, 2365
SmlI CTYRAG 7 cut(s) 594, 734, 1739, 2053, 2125, 2189, 2261
SmoI CTYRAG 7 cut(s) 594, 734, 1739, 2053, 2125, 2189, 2261
SspDI GGCGCC 1 cut(s) 1271
SspI AATATT 2 cut(s) 1680, 1800
SspMI CTAG 8 cut(s) 287, 308, 1221, 1226, 1481, 1748, 1835, 2432
SstI GAGCTC 2 cut(s) 45, 2309
StyD4I CCNGG 7 cut(s) 378, 867, 895, 1558, 2161, 2182, 2392
StyI CCWWGG 1 cut(s) 1662
TaaI ACNGT 3 cut(s) 715, 803, 1997
TaiI ACGT 4 cut(s) 369, 1851, 1953, 2358
TaqII GACCGA 3 cut(s) 148, 1001, 2317
TatI WGTACW 2 cut(s) 964, 1134
TauI GCSGC 1 cut(s) 162
TfiI GAWTC 9 cut(s) 148, 433, 527, 590, 838, 1294, 1387, 1672, 1906
TscAI CASTG 6 cut(s) 241, 397, 622, 940, 2000, 2325
TseFI GTSAC 4 cut(s) 683, 1099, 1377, 1453
TseI GCWGC 3 cut(s) 52, 2049, 2411
Tsp45I GTSAC 4 cut(s) 683, 1099, 1377, 1453
TspGWI ACGGA 2 cut(s) 53, 801
TspRI CASTG 6 cut(s) 241, 397, 622, 940, 2000, 2325
Tth111I GACNNNGTC 1 cut(s) 242
Van91I CCANNNNNTGG 1 cut(s) 1418
Vha464I CTTAAG 4 cut(s) 1739, 2053, 2125, 2189
VpaK11BI GGWCC 4 cut(s) 667, 855, 871, 1744
XapI RAATTY 3 cut(s) 265, 536, 944
XbaI TCTAGA 1 cut(s) 1225
XceI RCATGY 1 cut(s) 1771
XcmI CCANNNNNNNNNTGG 2 cut(s) 397, 865
XmnI GAANNNNTTC 1 cut(s) 2423
XspI CTAG 8 cut(s) 287, 308, 1221, 1226, 1481, 1748, 1835, 2432
ZrmI AGTACT 1 cut(s) 966
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.