Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0009528

Physical Location & Seq

Genomic Coordinates Forward (+)

60874323 .. 60877435

Gene Structure 3113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ26927

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2466 bp

ATGGCAGTTGCAGACTTCTTCGCCGGAGAGATTATCACGGAGCTCCTGAAGAACCTGATAGCCATATCCAAAAAATCATGGCAGTTCAAAGACAGCGCCAACGGCCTCAAAGACTCCATAGAACAGCTCCTCCCCATAATCCAAGAAATCAAGTACTCCGGCGTCGAGTTGCCGGCCATCCGCCAGTTTCAGCTCGACCGTATCTCGGAGACTCTCCGGAAGGGACATGAGCTGGCCCACAAGGTCCTCCTCTCCTCTCGCTACAACATTTACAAGAACCTCCAATATGCCCGCAAGATGGAGACGATCGAAAAGACCGTCGCCAAGTTCATCCAGGGCCCATTGCAGGCCCATATCTTGGCCGACGTCCACCACATAAGGTTCCAGACCACCGAGCGCTTCGACCGCCTTGAAGGCTCCAGCTACCGCCTGGAGCAGACGCTCGGCGCTATGAAGATTGGAGCTTGCAGTGGCGGCGGAGGTGTGTCGTGGGTGGAAGAGGCTGTGAGGCGCGTGGAGGAGGAGGGTCGGATGCAATGGGAGAGCAGCAGTGAGTTGGTTTTGGGCTTGGGTTTCGGGTTGAAGAAAGTCAAGGAAATGGTTCTTGGTACAGATGACTTGTTCGTTGGGATTAGTGGGATTGGCGGCTCGGGAAAAACCACTCTCGTTAAGGAGTTGATTAAGGATGATCATGTTCGATCTTACTTTGGCGAGAGAATCCTGTTCCTAACGGTGTCACAATCTCCGGATACAGAGGATTTGAAGGCCAAGATCTTAGGGTTCATTATGGGGAATCAAGTTTTGAGTCCCAGTTCTGTGCTTCCTCAAATGAACTTTCAGTTTGAATGGAGAAACCCAACAAAGACCCTGGTGGTTTTGGATGATGTTTGGTCACTTTCAACGCTTCAGCCACTGCTTTTCAACATTCCTGGTTGTAAAACCCTTGTGGTTTCACGTTTCAAATTCCAAACAGTAACAAAAACCACCTATGACGTGGAGTTGCTGGGTGAAGATGAAGCAGTCTCTCTGTTTTGCCATTCTGCTTTTGGCCAAAAGTTCATTCCTCCTGGTGCTGATAAGAAATTGGTCAAGCAGATTGTTGATGAGTGTAAGAGGCTTCCTTTGGCTCTCAAAGTGATTGGGTCTTCTTTACGAGACCAGCCTGAAATGATTTGGGCAAATGCAAGCAAAAGGTTGTCACGAGGGGAAAGCATCGGCGAGTCGCATGAAAACAACCTACTTGATCGGATGGCAATCAGTGTGAAATGCTTAAGCCCCAGAGTCAGGGAATGTTTCCTGGATTTGGGTGCCTTTCCAGAAGACAAGAAGATCCCACTGGATGTTCTTATCAACATTTGGGTTGAAACCCATGATCACATTGATGAAGAACAAGCCTTTGCTATTCTTCACGAGCTTTCGGACAAGAATCTTGTCACCCTAGTAAAAGATGCAAGAGATGGAGACATATATAGCAGTTGCTATGACATCTCAGTTACACAACATGATGTCTTGCGAGACCTTGCTCTTCATTTGAGTAATAATGGCTCTGTAAATCAACGCAGCCGATTACTGATGCCAAGAAGAGAGATAGAACTTCCAAGAGAATGGGACAGGCATTCTGATGAACCATTTCAAGCTCGAATTGTGTCAATTCATACAGGTGAAATGACAGAGATGGATTGGTTCGAGATGGAATTCCCCAAGGCTGAAGTGCTCATCTTGAATTTCGCCTCCAACGAGTACTTGTTACCTCCTTTTATTCGTAACATGCCAAAGTTGAAGGCATTGATCTTGATAAATTACAGTGCATTCAATGCAATTCTCCATGGTTTTTCTGTCTTGTCAAATTTGGGCAACTTGAGAAGCCTATGGCTTGAAAAAGTCTCAGTGCCTCCCTTATCCCCTGCTACCTTCCCTTCCAAAAAATTACGCAAGATTTCGTTAATCTTGTGTAAGATTAATAACAGCCTCGATCAATCAGTATTTCCTCGGCTCTTAGAACTCACAATTGATCATTGTGATGATTTGTTCGAGCTACCTGCAAGCATTTGTTGGATGCATATGCTTAACAATCTAAGCATAACCAACTGTCACCATCTATGGCAACTGCCAGTGGATTTAAGTAAGCTGAAATCTCTACAAATCCTAAGGCTATATGCGTGCCCATATCTGCAAAAACTTCCTCCTGACATTTGTGAGCTCTGTTGCTTGAAGTATCTAAACATTTCCCAATGCTGTAGTTTGAGGGGCCTTCCCTTAGACATTGGTAAGTTGGCAAGTTTGGAAAAGATTGACATGAGGGAATGCTCACAAATCAGGAACCTTCCAAATTCTACAGCAGCTTTACCATCTCTTGGTCGTGTAGTATGTGATGAAGAGATTTCTTGGTTCTGGAAGAAGGCATTGCCAGACCTTCATGTTCAGGTTGCAGAGAAACGTTTCGATCTTGACTGGCTTGATGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009987 GO:0010035 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0023052 GO:0042221 GO:0042742 GO:0043207 GO:0044237 GO:0044464 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0080167 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC RPW8

Protein Analysis

821

Amino Acids

93.25

Weight (kDa)

6.14

Isoelectric Point (pI)

48.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	9 - 129	5.8e-14	Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC	PF00931	196 - 351	1.5e-15	NB-ARC domain
LRR_14	PF23598	642 - 770	2.7e-10	Leucine-rich repeat region
LRR_14	PF23598	730 - 793	1.1e-06	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33300 AT4G33300
fragaria_vesca	FvH4_2g40720
malus_domestica	MD08G1041800.v1.1 MD08G1042400.v1.1 MD08G1042500.v1.1
prunus_persica	Prupe.1G389500_v2.0.a1
pyrus_communis	pycom08g03380 pycom08g03410 pycom08g03430 pycom08g03440
rosa_chinensis	RchiOBHm_Chr6g0299881
rosa_laevigata	RLG00000011379
rosa_multiflora	Rmu_ssc0000158.1_g000014
rosa_roxburghii	Rroxscaffold_7G00168310
rosa_rugosa	Rorug06G0293000
rosa_samantha	Rh6AG404300 Rh6BG412500 Rh6CG418500 Rh6DG405400
rosa_wichuraiana	Rw6G035360 Rw6G035380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	369
Acc36I	ACCTGC	1 cut(s)	2047
AccB1I	GGYRCC	1 cut(s)	1307
AccB7I	CCANNNNNTGG	2 cut(s)	358, 2354
AccII	CGCG	1 cut(s)	513
AccIII	TCCGGA	2 cut(s)	216, 745
AciI	CCGC	7 cut(s)	181, 292, 406, 427, 474, 477, 645
AclI	AACGTT	1 cut(s)	2437
AclWI	GGATC	1 cut(s)	1324
AcoI	YGGCCR	3 cut(s)	174, 360, 1048
AcsI	RAATTY	5 cut(s)	962, 1694, 1723, 1846, 2329
AcuI	CTGAAG	3 cut(s)	68, 890, 1728
AcyI	GRCGYC	2 cut(s)	162, 366
AfaI	GTAC	3 cut(s)	155, 610, 1742
AfeI	AGCGCT	1 cut(s)	398
AfiI	CCNNNNNNNGG	7 cut(s)	205, 298, 346, 358, 1284, 1303, 2354
AflII	CTTAAG	1 cut(s)	1270
AjiI	CACGTC	1 cut(s)	994
AjnI	CCWGG	6 cut(s)	333, 429, 867, 928, 1066, 1296
AjuI	GAANNNNNNNTTGG	4 cut(s)	588, 620, 1044, 1076
AloI	GAACNNNNNNTCC	2 cut(s)	114, 146
Alw21I	GWGCWC	3 cut(s)	45, 1716, 2202
Alw26I	GTCTC	7 cut(s)	203, 296, 1027, 1149, 1455, 1509, 1888
AlwI	GGATC	1 cut(s)	1324
AlwNI	CAGNNNCTG	1 cut(s)	913
Ama87I	CYCGRG	1 cut(s)	649
Aor13HI	TCCGGA	2 cut(s)	216, 745
Aor51HI	AGCGCT	1 cut(s)	398
AoxI	GGCC	9 cut(s)	103, 174, 234, 337, 348, 360, 765, 1048, 2248
ApaI	GGGCCC	1 cut(s)	341
ApeKI	GCWGC	3 cut(s)	546, 1560, 2339
ApoI	RAATTY	5 cut(s)	962, 1694, 1723, 1846, 2329
ArsI	GACNNNNNNTTYG	2 cut(s)	303, 335
AseI	ATTAAT	1 cut(s)	1959
Asp700I	GAANNNNTTC	3 cut(s)	600, 1629, 2438
AspLEI	GCGC	4 cut(s)	98, 399, 449, 513
AspS9I	GGNCC	6 cut(s)	235, 244, 337, 338, 349, 2248
AsuHPI	GGTGA	4 cut(s)	1019, 1426, 1673, 2084
AvaI	CYCGRG	1 cut(s)	649
AvaII	GGWCC	1 cut(s)	244
AxyI	CCTNAGG	1 cut(s)	2147
BaeGI	GKGCMC	2 cut(s)	341, 2165
BalI	TGGCCA	1 cut(s)	1050
BanI	GGYRCC	1 cut(s)	1307
BanII	GRGCYC	3 cut(s)	45, 341, 2202
BauI	CACGAG	2 cut(s)	1200, 1409
BbsI	GAAGAC	2 cut(s)	1137, 1326
Bbv12I	GWGCWC	3 cut(s)	45, 1716, 2202
BbvI	GCAGC	3 cut(s)	558, 1572, 2351
BccI	CCATC	8 cut(s)	185, 292, 1243, 1451, 1669, 1684, 2103, 2356
BceAI	ACGGC	1 cut(s)	118
BcgI	CGANNNNNNTGC	2 cut(s)	2021, 2055
BciT130I	CCWGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
BciVI	GTATCC	1 cut(s)	742
BclI	TGATCA	3 cut(s)	688, 1372, 2011
BcoDI	GTCTC	7 cut(s)	203, 296, 1027, 1149, 1455, 1509, 1888
BfaI	CTAG	1 cut(s)	1439
BfmI	CTRYAG	2 cut(s)	2236, 2334
BfoI	RGCGCY	3 cut(s)	99, 400, 450
BfrI	CTTAAG	1 cut(s)	1270
BfuAI	ACCTGC	1 cut(s)	2047
BfuI	GTATCC	1 cut(s)	742
BglI	GCCNNNNNGGC	1 cut(s)	414
BglII	AGATCT	1 cut(s)	771
BisI	GCNGC	5 cut(s)	475, 547, 646, 1561, 2340
BlsI	GCNGC	5 cut(s)	476, 548, 647, 1562, 2341
BmcAI	AGTACT	2 cut(s)	155, 1742
Bme1390I	CCNGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
Bme18I	GGWCC	1 cut(s)	244
BmeT110I	CYCGRG	1 cut(s)	649
BmgBI	CACGTC	1 cut(s)	994
BmgT120I	GGNCC	6 cut(s)	235, 244, 337, 338, 349, 2248
BmiI	GGNNCC	6 cut(s)	339, 383, 418, 1309, 2249, 2321
BmrFI	CCNGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
BmrI	ACTGGG	1 cut(s)	804
BmsI	GCATC	5 cut(s)	522, 1221, 1438, 1563, 2046
BmuI	ACTGGG	1 cut(s)	804
BpiI	GAAGAC	2 cut(s)	1137, 1326
BpmI	CTGGAG	2 cut(s)	403, 452
BpuEI	CTTGAG	1 cut(s)	1879
BsaBI	GATNNNNATC	1 cut(s)	1253
BsaHI	GRCGYC	2 cut(s)	162, 366
BsaI	GGTCTC	2 cut(s)	1149, 1509
BsaJI	CCNNGG	5 cut(s)	334, 867, 1701, 1825, 1988
BsaWI	WCCGGW	2 cut(s)	216, 745
BsaXI	ACNNNNNCTCC	2 cut(s)	114, 144
Bsc4I	CCNNNNNNNGG	7 cut(s)	205, 298, 346, 358, 1284, 1303, 2354
Bse118I	RCCGGY	1 cut(s)	172
Bse1I	ACTGG	5 cut(s)	184, 810, 1341, 2111, 2456
Bse21I	CCTNAGG	1 cut(s)	2147
Bse3DI	GCAATG	3 cut(s)	341, 542, 2402
Bse8I	GATNNNNATC	1 cut(s)	1253
BseAI	TCCGGA	2 cut(s)	216, 745
BseBI	CCWGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
BseDI	CCNNGG	5 cut(s)	334, 867, 1701, 1825, 1988
BseGI	GGATG	8 cut(s)	177, 330, 537, 691, 886, 1254, 1345, 2061
BseJI	GATNNNNATC	1 cut(s)	1253
BseLI	CCNNNNNNNGG	7 cut(s)	205, 298, 346, 358, 1284, 1303, 2354
BseMI	GCAATG	3 cut(s)	341, 542, 2402
BseMII	CTCAG	2 cut(s)	1503, 1899
BseNI	ACTGG	5 cut(s)	184, 810, 1341, 2111, 2456
BseRI	GAGGAG	5 cut(s)	119, 239, 244, 533, 536
BseSI	GKGCMC	2 cut(s)	341, 2165
BseXI	GCAGC	3 cut(s)	558, 1572, 2351
BseYI	CCCAGC	1 cut(s)	1003
Bsh1236I	CGCG	1 cut(s)	513
Bsh1285I	CGRYCG	3 cut(s)	199, 309, 406
BshFI	GGCC	9 cut(s)	105, 176, 236, 339, 350, 362, 767, 1050, 2250
BshNI	GGYRCC	1 cut(s)	1307
BsiEI	CGRYCG	3 cut(s)	199, 309, 406
BsiHKAI	GWGCWC	3 cut(s)	45, 1716, 2202
BsiHKCI	CYCGRG	1 cut(s)	649
BsiSI	CCGG	5 cut(s)	24, 159, 173, 217, 746
BslFI	GGGAC	3 cut(s)	237, 792, 1622
BslI	CCNNNNNNNGG	7 cut(s)	205, 298, 346, 358, 1284, 1303, 2354
BsmAI	GTCTC	7 cut(s)	203, 296, 1027, 1149, 1455, 1509, 1888
BsmBI	CGTCTC	1 cut(s)	296
BsmFI	GGGAC	3 cut(s)	237, 792, 1622
BsmI	GAATGC	3 cut(s)	1615, 1808, 2309
BsnI	GGCC	9 cut(s)	105, 176, 236, 339, 350, 362, 767, 1050, 2250
Bso31I	GGTCTC	2 cut(s)	1149, 1509
BsoBI	CYCGRG	1 cut(s)	649
Bsp120I	GGGCCC	1 cut(s)	337
Bsp1286I	GDGCHC	5 cut(s)	45, 341, 1716, 2165, 2202
Bsp13I	TCCGGA	2 cut(s)	216, 745
Bsp19I	CCATGG	1 cut(s)	1825
BspACI	CCGC	7 cut(s)	181, 292, 406, 427, 474, 477, 645
BspANI	GGCC	9 cut(s)	105, 176, 236, 339, 350, 362, 767, 1050, 2250
BspCNI	CTCAG	2 cut(s)	1502, 1898
BspEI	TCCGGA	2 cut(s)	216, 745
BspFNI	CGCG	1 cut(s)	513
BspLI	GGNNCC	6 cut(s)	339, 383, 418, 1309, 2249, 2321
BspMI	ACCTGC	1 cut(s)	2047
BspPI	GGATC	1 cut(s)	1324
BspQI	GCTCTTC	1 cut(s)	1530
BspT107I	GGYRCC	1 cut(s)	1307
BspTI	CTTAAG	1 cut(s)	1270
BspTNI	GGTCTC	2 cut(s)	1149, 1509
BsrDI	GCAATG	3 cut(s)	341, 542, 2402
BsrFI	RCCGGY	1 cut(s)	172
BsrI	ACTGG	5 cut(s)	184, 810, 1341, 2111, 2456
BssAI	RCCGGY	1 cut(s)	172
BssECI	CCNNGG	5 cut(s)	334, 867, 1701, 1825, 1988
BssNI	GRCGYC	2 cut(s)	162, 366
BssSI	CACGAG	2 cut(s)	1200, 1409
BssT1I	CCWWGG	2 cut(s)	1701, 1825
Bst2BI	CACGAG	2 cut(s)	1200, 1409
Bst2UI	CCWGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
Bst4CI	ACNGT	6 cut(s)	200, 319, 733, 973, 1805, 2090
Bst6I	CTCTTC	4 cut(s)	492, 1530, 1576, 2370
BstACI	GRCGYC	2 cut(s)	162, 366
BstAFI	CTTAAG	1 cut(s)	1270
BstAPI	GCANNNNNTGC	1 cut(s)	1814
BstC8I	GCNNGC	8 cut(s)	174, 234, 292, 348, 466, 1186, 2044, 2161
BstDEI	CTNAG	7 cut(s)	775, 1489, 1885, 1996, 2075, 2147, 2257
BstDSI	CCRYGG	1 cut(s)	1825
BstF5I	GGATG	8 cut(s)	177, 330, 537, 691, 886, 1254, 1345, 2061
BstFNI	CGCG	1 cut(s)	513
BstH2I	RGCGCY	3 cut(s)	99, 400, 450
BstHHI	GCGC	4 cut(s)	98, 399, 449, 513
BstMAI	GTCTC	7 cut(s)	203, 296, 1027, 1149, 1455, 1509, 1888
BstMCI	CGRYCG	3 cut(s)	199, 309, 406
BstMWI	GCNNNNNNNGC	5 cut(s)	102, 405, 414, 474, 1814
BstNI	CCWGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
BstNSI	RCATGY	1 cut(s)	1771
BstSCI	CCNGG	6 cut(s)	333, 429, 867, 928, 1066, 1296
BstSFI	CTRYAG	2 cut(s)	2236, 2334
BstSLI	GKGCMC	2 cut(s)	341, 2165
BstUI	CGCG	1 cut(s)	513
BstV1I	GCAGC	3 cut(s)	558, 1572, 2351
BstV2I	GAAGAC	2 cut(s)	1137, 1326
BstX2I	RGATCY	2 cut(s)	771, 1329
BstXI	CCANNNNNNTGG	1 cut(s)	1605
BstYI	RGATCY	2 cut(s)	771, 1329
Bsu36I	CCTNAGG	1 cut(s)	2147
BsuI	GTATCC	1 cut(s)	742
BsuRI	GGCC	9 cut(s)	105, 176, 236, 339, 350, 362, 767, 1050, 2250
BtgI	CCRYGG	1 cut(s)	1825
BtrI	CACGTC	1 cut(s)	994
BtsCI	GGATG	8 cut(s)	177, 330, 537, 691, 886, 1254, 1345, 2061
BtsI	GCAGTG	3 cut(s)	475, 556, 911
BtsIMutI	CAGTG	8 cut(s)	475, 556, 911, 1264, 1334, 1810, 1893, 2118
BveI	ACCTGC	1 cut(s)	2047
Cac8I	GCNNGC	8 cut(s)	174, 234, 292, 348, 466, 1186, 2044, 2161
CaiI	CAGNNNCTG	1 cut(s)	913
CfoI	GCGC	4 cut(s)	98, 399, 449, 513
Cfr10I	RCCGGY	1 cut(s)	172
Cfr13I	GGNCC	6 cut(s)	235, 244, 337, 338, 349, 2248
CseI	GACGC	2 cut(s)	151, 448
Csp6I	GTAC	3 cut(s)	154, 609, 1741
CviQI	GTAC	3 cut(s)	154, 609, 1741
DdeI	CTNAG	7 cut(s)	775, 1489, 1885, 1996, 2075, 2147, 2257
EaeI	YGGCCR	3 cut(s)	174, 360, 1048
Eam1104I	CTCTTC	4 cut(s)	492, 1530, 1576, 2370
EarI	CTCTTC	4 cut(s)	492, 1530, 1576, 2370
EciI	GGCGGA	2 cut(s)	170, 492
Ecl136II	GAGCTC	2 cut(s)	43, 2200
Eco130I	CCWWGG	2 cut(s)	1701, 1825
Eco24I	GRGCYC	3 cut(s)	45, 341, 2202
Eco31I	GGTCTC	2 cut(s)	1149, 1509
Eco47I	GGWCC	1 cut(s)	244
Eco47III	AGCGCT	1 cut(s)	398
Eco53kI	GAGCTC	2 cut(s)	43, 2200
Eco57I	CTGAAG	3 cut(s)	68, 890, 1728
Eco81I	CCTNAGG	1 cut(s)	2147
Eco88I	CYCGRG	1 cut(s)	649
EcoICRI	GAGCTC	2 cut(s)	43, 2200
EcoO109I	RGGNCCY	3 cut(s)	244, 337, 2248
EcoRI	GAATTC	1 cut(s)	1694
EcoRII	CCWGG	6 cut(s)	333, 429, 867, 928, 1066, 1296
EcoT14I	CCWWGG	2 cut(s)	1701, 1825
EcoT22I	ATGCAT	1 cut(s)	2061
EcoT38I	GRGCYC	3 cut(s)	45, 341, 2202
ErhI	CCWWGG	2 cut(s)	1701, 1825
Esp3I	CGTCTC	1 cut(s)	296
FaqI	GGGAC	3 cut(s)	237, 792, 1622
FauI	CCCGC	1 cut(s)	299
FauNDI	CATATG	1 cut(s)	2061
FbaI	TGATCA	3 cut(s)	688, 1372, 2011
Fnu4HI	GCNGC	5 cut(s)	475, 547, 646, 1561, 2340
FokI	GGATG	8 cut(s)	164, 317, 544, 698, 893, 1261, 1352, 2068
FriOI	GRGCYC	3 cut(s)	45, 341, 2202
Fsp4HI	GCNGC	5 cut(s)	475, 547, 646, 1561, 2340
FspBI	CTAG	1 cut(s)	1439
GlaI	GCGC	4 cut(s)	97, 398, 448, 512
GluI	GCNGC	5 cut(s)	475, 547, 646, 1561, 2340
GsaI	CCCAGC	1 cut(s)	1007
GsuI	CTGGAG	2 cut(s)	403, 452
HaeII	RGCGCY	3 cut(s)	99, 400, 450
HaeIII	GGCC	9 cut(s)	105, 176, 236, 339, 350, 362, 767, 1050, 2250
HapII	CCGG	5 cut(s)	24, 159, 173, 217, 746
HgaI	GACGC	2 cut(s)	151, 448
HhaI	GCGC	4 cut(s)	98, 399, 449, 513
Hin1I	GRCGYC	2 cut(s)	162, 366
Hin6I	GCGC	4 cut(s)	96, 397, 447, 511
HinP1I	GCGC	4 cut(s)	96, 397, 447, 511
HinfI	GANTC	8 cut(s)	113, 211, 717, 793, 805, 1220, 1281, 1426
HpaII	CCGG	5 cut(s)	24, 159, 173, 217, 746
HphI	GGTGA	4 cut(s)	1019, 1426, 1673, 2084
Hpy166II	GTNNAC	1 cut(s)	370
Hpy188I	TCNGA	5 cut(s)	208, 531, 1248, 1420, 1621
Hpy8I	GTNNAC	1 cut(s)	370
Hpy99I	CGWCG	3 cut(s)	167, 323, 368
HpyCH4III	ACNGT	6 cut(s)	200, 319, 733, 973, 1805, 2090
HpyCH4IV	ACGT	4 cut(s)	366, 955, 993, 2437
HpyF10VI	GCNNNNNNNGC	5 cut(s)	102, 405, 414, 474, 1814
HpyF3I	CTNAG	7 cut(s)	775, 1489, 1885, 1996, 2075, 2147, 2257
HpySE526I	ACGT	4 cut(s)	366, 955, 993, 2437
Hsp92I	GRCGYC	2 cut(s)	162, 366
HspAI	GCGC	4 cut(s)	96, 397, 447, 511
Kpn2I	TCCGGA	2 cut(s)	216, 745
KroI	GCCGGC	1 cut(s)	172
KroNI	GCCGGC	1 cut(s)	174
Ksp22I	TGATCA	3 cut(s)	688, 1372, 2011
LguI	GCTCTTC	1 cut(s)	1530
LmnI	GCTCC	6 cut(s)	40, 48, 132, 422, 433, 461
Lsp1109I	GCAGC	3 cut(s)	558, 1572, 2351
LweI	GCATC	5 cut(s)	522, 1221, 1438, 1563, 2046
MaeI	CTAG	1 cut(s)	1439
MaeII	ACGT	4 cut(s)	366, 955, 993, 2437
MaeIII	GTNAC	9 cut(s)	735, 891, 973, 1197, 1432, 1492, 1746, 1763, 2090
MfeI	CAATTG	1 cut(s)	2007
MflI	RGATCY	2 cut(s)	771, 1329
MhlI	GDGCHC	5 cut(s)	45, 341, 1716, 2165, 2202
MlsI	TGGCCA	1 cut(s)	1050
MluNI	TGGCCA	1 cut(s)	1050
MlyI	GAGTC	5 cut(s)	107, 205, 814, 1229, 1290
MmeI	TCCRAC	3 cut(s)	509, 1758, 2033
Mox20I	TGGCCA	1 cut(s)	1050
Mph1103I	ATGCAT	1 cut(s)	2061
MroI	TCCGGA	2 cut(s)	216, 745
MroNI	GCCGGC	1 cut(s)	172
MroXI	GAANNNNTTC	3 cut(s)	600, 1629, 2438
MscI	TGGCCA	1 cut(s)	1050
MseI	TTAA	7 cut(s)	669, 681, 1271, 1943, 1959, 2067, 2120
MslI	CAYNNNNRTG	4 cut(s)	1380, 1620, 1659, 2019
Msp20I	TGGCCA	1 cut(s)	1050
MspCI	CTTAAG	1 cut(s)	1270
MspI	CCGG	5 cut(s)	24, 159, 173, 217, 746
MspR9I	CCNGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
MunI	CAATTG	1 cut(s)	2007
Mva1269I	GAATGC	3 cut(s)	1615, 1808, 2309
MvaI	CCWGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
MvnI	CGCG	1 cut(s)	513
MwoI	GCNNNNNNNGC	5 cut(s)	102, 405, 414, 474, 1814
NaeI	GCCGGC	1 cut(s)	174
NcoI	CCATGG	1 cut(s)	1825
NdeI	CATATG	1 cut(s)	2061
NgoMIV	GCCGGC	1 cut(s)	172
NlaIV	GGNNCC	6 cut(s)	339, 383, 418, 1309, 2249, 2321
NmeAIII	GCCGAG	2 cut(s)	423, 1969
NmuCI	GTSAC	5 cut(s)	735, 891, 1197, 1432, 2090
NsiI	ATGCAT	1 cut(s)	2061
NspI	RCATGY	1 cut(s)	1771
PciSI	GCTCTTC	1 cut(s)	1530
PcsI	WCGNNNNNNNCGW	2 cut(s)	315, 1734
PctI	GAATGC	3 cut(s)	1615, 1808, 2309
PdiI	GCCGGC	1 cut(s)	174
PdmI	GAANNNNTTC	3 cut(s)	600, 1629, 2438
PfeI	GAWTC	3 cut(s)	717, 793, 1426
PflMI	CCANNNNNTGG	2 cut(s)	358, 2354
PfoI	TCCNGGA	1 cut(s)	1296
PkrI	GCNGC	5 cut(s)	476, 548, 647, 1562, 2341
Ple19I	CGATCG	1 cut(s)	309
PleI	GAGTC	5 cut(s)	107, 205, 813, 1228, 1289
PpsI	GAGTC	5 cut(s)	107, 205, 813, 1228, 1289
PpuMI	RGGWCCY	1 cut(s)	244
PshBI	ATTAAT	1 cut(s)	1959
Psp124BI	GAGCTC	2 cut(s)	45, 2202
Psp1406I	AACGTT	1 cut(s)	2437
Psp5II	RGGWCCY	1 cut(s)	244
Psp6I	CCWGG	6 cut(s)	333, 429, 867, 928, 1066, 1296
PspFI	CCCAGC	1 cut(s)	1003
PspGI	CCWGG	6 cut(s)	333, 429, 867, 928, 1066, 1296
PspN4I	GGNNCC	6 cut(s)	339, 383, 418, 1309, 2249, 2321
PspOMI	GGGCCC	1 cut(s)	337
PspPI	GGNCC	6 cut(s)	235, 244, 337, 338, 349, 2248
PspPPI	RGGWCCY	1 cut(s)	244
PstNI	CAGNNNCTG	1 cut(s)	913
PsuI	RGATCY	2 cut(s)	771, 1329
PvuI	CGATCG	1 cut(s)	309
RsaI	GTAC	3 cut(s)	155, 610, 1742
RsaNI	GTAC	3 cut(s)	154, 609, 1741
RseI	CAYNNNNRTG	4 cut(s)	1380, 1620, 1659, 2019
SacI	GAGCTC	2 cut(s)	45, 2202
SapI	GCTCTTC	1 cut(s)	1530
SaqAI	TTAA	7 cut(s)	669, 681, 1271, 1943, 1959, 2067, 2120
SatI	GCNGC	5 cut(s)	475, 547, 646, 1561, 2340
Sau96I	GGNCC	6 cut(s)	235, 244, 337, 338, 349, 2248
ScaI	AGTACT	2 cut(s)	155, 1742
SchI	GAGTC	5 cut(s)	107, 205, 814, 1229, 1290
ScrFI	CCNGG	6 cut(s)	335, 431, 869, 930, 1068, 1298
SduI	GDGCHC	5 cut(s)	45, 341, 1716, 2165, 2202
SfaNI	GCATC	5 cut(s)	522, 1221, 1438, 1563, 2046
SfcI	CTRYAG	2 cut(s)	2236, 2334
SinI	GGWCC	1 cut(s)	244
SmiMI	CAYNNNNRTG	4 cut(s)	1380, 1620, 1659, 2019
SmlI	CTYRAG	2 cut(s)	1270, 1858
SmoI	CTYRAG	2 cut(s)	1270, 1858
SsiI	CCGC	7 cut(s)	181, 292, 406, 427, 474, 477, 645
SspMI	CTAG	1 cut(s)	1439
SstI	GAGCTC	2 cut(s)	45, 2202
StyD4I	CCNGG	6 cut(s)	333, 429, 867, 928, 1066, 1296
StyI	CCWWGG	2 cut(s)	1701, 1825
TaaI	ACNGT	6 cut(s)	200, 319, 733, 973, 1805, 2090
TaiI	ACGT	4 cut(s)	369, 958, 996, 2440
TatI	WGTACW	2 cut(s)	153, 1740
TauI	GCSGC	2 cut(s)	477, 648
TfiI	GAWTC	3 cut(s)	717, 793, 1426
Tru1I	TTAA	7 cut(s)	669, 681, 1271, 1943, 1959, 2067, 2120
Tru9I	TTAA	7 cut(s)	669, 681, 1271, 1943, 1959, 2067, 2120
TscAI	CASTG	8 cut(s)	475, 556, 918, 1264, 1341, 1810, 1893, 2118
TseFI	GTSAC	5 cut(s)	735, 891, 1197, 1432, 2090
TseI	GCWGC	3 cut(s)	546, 1560, 2339
Tsp45I	GTSAC	5 cut(s)	735, 891, 1197, 1432, 2090
TspGWI	ACGGA	1 cut(s)	53
TspRI	CASTG	8 cut(s)	475, 556, 918, 1264, 1341, 1810, 1893, 2118
Van91I	CCANNNNNTGG	2 cut(s)	358, 2354
Vha464I	CTTAAG	1 cut(s)	1270
VpaK11BI	GGWCC	1 cut(s)	244
VspI	ATTAAT	1 cut(s)	1959
XapI	RAATTY	5 cut(s)	962, 1694, 1723, 1846, 2329
XceI	RCATGY	1 cut(s)	1771
XcmI	CCANNNNNNNNNTGG	3 cut(s)	427, 991, 1043
XmnI	GAANNNNTTC	3 cut(s)	600, 1629, 2438
XspI	CTAG	1 cut(s)	1439
ZraI	GACGTC	1 cut(s)	367
ZrmI	AGTACT	2 cut(s)	155, 1742
Zsp2I	ATGCAT	1 cut(s)	2061

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.