Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009528

Physical Location & Seq

Genomic Coordinates Forward (+)

59917586 .. 59920463

Gene Structure 2878 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G035360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGCAGTTGCAGACTTCTTCGCCGGAGAGATTATCACGGAGCTCCTGAAGAACCTGATAGCCATATCCAAAAAATCATGGCAGTTCAAAGACAGCGCCAACGGCCTCAAAGACTCCATAGAACAGCTCCTCCCCATAATCCAAGAAATCAAGTACTCCGGCGGACATGAGCTGGCCCACAAGGTCCTCCTCTCCTCTCGCTACAACATTTACAAGAACCTCCAATATGCCCGCAAGATGGAGAGGATCGAAAAGACCGTCGCCAAGTTCATCCAGGGCCCATTGCAGACCCATATCTTGGCCGACGTCCACCACATAAGGTTCCAGACCACCGAGCGCTTCGACCGCCTTGAAGGCTCCAGCTACCGCCTGGAGCAGAGTCTCAGCGCTATGAAGATTGGAGCTTGCAGTGGCGGCGGAGGTGTGTCGTGGGTGGAAGAGGCTGTGAGGCGCGTGGAGGAGGAGGGTCGGATGCAATGGGAGAGCAGCAGTGATCAAGGAAATGGTCTTGGCAGAGATGACTTGTTCGTTGGAATTAGTGGGATTGGCGGCTCGGGAAAAACCACTCTTGTTAAGGAGTTGATTAAGGATGATCATGTTCGATCTTACTTTGGTGAGAGGATCCTGTTCCTAACGGTGTCACAATCTCCGGATATAGAGGATTTGAAGGCCAAGATCTTGGGGTTCATTATGGGGAGTCAAGTTTTGAGTCCCAGTTCTGTGCTTCCTCAAATTAACTTTCAGTTTGAATGGAGAAACCCAACAAAGACCCTGGTGGTTTTGGATGATGTTTGGTCACTTTCAACGCTTCAGCCACTGCTCTTCAACATTCCTGGTTGTAAAACCCTTGTGGTTTCACGTTTCAAATTCCAAACAGTAACAAAAGCCACCTATGACGTGGAGTTGCTGGGTGAAGATGAAGCAGTCTCTCTGTTTTGCCACTCTGCTTTTGGCCAAAAGTTCATTCCTCCTGGTGCTGATAAGAAATTGGTCAAGCAGATTGTTGATGAGTGTAAGAGGCTTCCTTTGGCTCTCAAAGTGATTGGGTCATCTTTACGAGACCAGCCTGAAATGATTTGGTCAAATGCAAGCAAAAGGTTGTCACGAGGGGAAAGCATCGGCGAGTCGCATGAGAACAACCTACTTGATCGGATGGCAATCAGTGTGAAATGTTTAAGCCCCAGAGTCAGGGAATGTTTCCTGGATTTGGGTGCCTTTCCAGAAGACAAGAAGATCCCACTGGATGTTCTTATCAACATTTGGGTTGAAACCCATGATCACATTGATGAAGAACAAGCCTTTGCTATTCTTCACGAGCTTTCGGACAAGAATCTTGTCACCCTAGTAAAAGATGCAAGAGATGGAGACATATATAGCAGTTGCTATGACATCTCAGTTACACAACATGATGTCTTGCGAGACCTTGCTCTTCATTTGAGTAATAATGGGTCCGTAAATCAACGCAGCCGATTACTGATGCCAAGAAGAGAGATAGAACTTCCAAGAGAATGGGACAGGCATTCCGATGAACCATTTCAAGCTCGAATTGTATCGATTCATACAGGTGAAATGACAGAGATGGATTGGTTCGAGATGGAATTCCCCAAGGCTGAAGTGCTCATCTTGAATTTTGCCTCCAACGAGTACTTGTTACCTCCTTTTATTCGTAACATGCCAAAGTTGAAGGCATTGATCTTGATAAATTACAGTGCATCCAATGCAATTCTCCATGGTTTTTCTGTGTTGTCAAATTTGGGCAACTTGAGAAGCCTATGGCTTGAAAAAGTCTCAGTCCCTCCCTTATCCCCTGCTACCTTCCCTTCCAAAAAATTACGCAAGATTTCGTTAATCTTGTGTAAGATTAATAACAGCCTCGATCAATCAGTATTTCCTCGGCTCTTAGAACTCACAATTGATCATTGTGATGATTTGTTCGAGCTACCTTCAAGCATTTGTTGGATGCATATGCTTAACAATCTAAGCATAACCAACTGTCACCATCTATGGCAACTGCCAGCGGATTTAAGTAAGCTGAAATCTCTACAAATCCTAAGGCTATATGCGTGCCCATATCTGCAAAAACTTCCTCCTGACATTTGTGAGCTCTGTTGCTTGAAGTATCTAAACATTTCCCAATGCTGTAGTTTGAGGGGCCTTCCCTTAGGCATTGGTAAGTTGGCAAGTTTGGAAAAGATTGACATGAGGGAATGCTCACAAATCAGGAGCCTTCCAAATTCTACAGCAGCTTTACCATCTCTTGGTCGTGTAGTATGTGATGAAGAGATTTCTTGGTTCTGGGAGAAGGCATTGCCCGACCTTCATGTTCAGGTTGCAGAGAAACGTTTCGATCTTGACTGGCTTGATGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009987 GO:0010035 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0023052 GO:0042221 GO:0042742 GO:0043207 GO:0044237 GO:0044464 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0080167 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC RPW8

Protein Analysis

789

Amino Acids

89.44

Weight (kDa)

6.01

Isoelectric Point (pI)

51.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	176 - 319	7.4e-15	NB-ARC domain
LRR_14	PF23598	610 - 738	3.5e-12	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33300 AT4G33300
fragaria_vesca	FvH4_2g40720
malus_domestica	MD08G1041800.v1.1 MD08G1042400.v1.1 MD08G1042500.v1.1
prunus_persica	Prupe.1G389500_v2.0.a1
pyrus_communis	pycom08g03380 pycom08g03410 pycom08g03430 pycom08g03440
rosa_chinensis	RchiOBHm_Chr6g0299881
rosa_laevigata	RLG00000011379
rosa_multiflora	Rmu_ssc0000158.1_g000014
rosa_roxburghii	Rroxscaffold_7G00168310
rosa_rugosa	Rorug06G0293000
rosa_samantha	Rh6AG404300 Rh6BG412500 Rh6CG418500 Rh6DG405400
rosa_wichuraiana	Rw6G035360 Rw6G035380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	309
AccB1I	GGYRCC	1 cut(s)	1211
AccB7I	CCANNNNNTGG	2 cut(s)	298, 2258
AccII	CGCG	1 cut(s)	453
AccIII	TCCGGA	1 cut(s)	649
AciI	CCGC	8 cut(s)	162, 232, 346, 367, 414, 417, 549, 2018
AclI	AACGTT	1 cut(s)	2341
AclWI	GGATC	4 cut(s)	254, 616, 629, 1228
AcoI	YGGCCR	2 cut(s)	300, 952
AcsI	RAATTY	5 cut(s)	866, 1598, 1627, 1750, 2233
AcuI	CTGAAG	3 cut(s)	68, 794, 1632
AcyI	GRCGYC	1 cut(s)	306
AfaI	GTAC	2 cut(s)	155, 1646
AfeI	AGCGCT	2 cut(s)	338, 388
AfiI	CCNNNNNNNGG	5 cut(s)	238, 298, 1188, 1207, 2258
AjiI	CACGTC	1 cut(s)	898
AjnI	CCWGG	6 cut(s)	273, 369, 771, 832, 970, 1200
AjuI	GAANNNNNNNTTGG	2 cut(s)	948, 980
AloI	GAACNNNNNNTCC	2 cut(s)	114, 146
Alw21I	GWGCWC	3 cut(s)	45, 1620, 2106
Alw26I	GTCTC	6 cut(s)	386, 931, 1053, 1359, 1413, 1792
AlwI	GGATC	4 cut(s)	254, 616, 629, 1228
AlwNI	CAGNNNCTG	1 cut(s)	817
Ama87I	CYCGRG	1 cut(s)	553
Aor13HI	TCCGGA	1 cut(s)	649
Aor51HI	AGCGCT	2 cut(s)	338, 388
AoxI	GGCC	7 cut(s)	103, 174, 277, 300, 669, 952, 2152
ApaI	GGGCCC	1 cut(s)	281
ApeKI	GCWGC	3 cut(s)	486, 1464, 2243
ApoI	RAATTY	5 cut(s)	866, 1598, 1627, 1750, 2233
ArsI	GACNNNNNNTTYG	2 cut(s)	243, 275
AseI	ATTAAT	1 cut(s)	1863
Asp700I	GAANNNNTTC	2 cut(s)	1533, 2342
AspLEI	GCGC	4 cut(s)	98, 339, 389, 453
AspS9I	GGNCC	6 cut(s)	175, 184, 277, 278, 1449, 2152
AsuHPI	GGTGA	5 cut(s)	626, 923, 1330, 1577, 1988
AvaI	CYCGRG	1 cut(s)	553
AvaII	GGWCC	2 cut(s)	184, 1449
AxyI	CCTNAGG	2 cut(s)	2051, 2161
BaeGI	GKGCMC	2 cut(s)	281, 2069
BalI	TGGCCA	1 cut(s)	954
BamHI	GGATCC	1 cut(s)	621
BanI	GGYRCC	1 cut(s)	1211
BanII	GRGCYC	3 cut(s)	45, 281, 2106
BauI	CACGAG	2 cut(s)	1104, 1313
BbsI	GAAGAC	1 cut(s)	1230
Bbv12I	GWGCWC	3 cut(s)	45, 1620, 2106
BbvI	GCAGC	3 cut(s)	498, 1476, 2255
BccI	CCATC	7 cut(s)	232, 1147, 1355, 1573, 1588, 2007, 2260
BceAI	ACGGC	1 cut(s)	118
BciT130I	CCWGG	6 cut(s)	275, 371, 773, 834, 972, 1202
BclI	TGATCA	4 cut(s)	493, 592, 1276, 1915
BcoDI	GTCTC	6 cut(s)	386, 931, 1053, 1359, 1413, 1792
BfaI	CTAG	1 cut(s)	1343
BfmI	CTRYAG	2 cut(s)	2140, 2238
BfoI	RGCGCY	3 cut(s)	99, 340, 390
BglI	GCCNNNNNGGC	1 cut(s)	354
BglII	AGATCT	1 cut(s)	675
BisI	GCNGC	5 cut(s)	415, 487, 550, 1465, 2244
BlsI	GCNGC	5 cut(s)	416, 488, 551, 1466, 2245
BmcAI	AGTACT	2 cut(s)	155, 1646
Bme1390I	CCNGG	6 cut(s)	275, 371, 773, 834, 972, 1202
Bme18I	GGWCC	2 cut(s)	184, 1449
BmeT110I	CYCGRG	1 cut(s)	553
BmgBI	CACGTC	1 cut(s)	898
BmgT120I	GGNCC	6 cut(s)	175, 184, 277, 278, 1449, 2152
BmiI	GGNNCC	8 cut(s)	279, 323, 358, 623, 1213, 1450, 2153, 2225
BmrFI	CCNGG	6 cut(s)	275, 371, 773, 834, 972, 1202
BmrI	ACTGGG	1 cut(s)	708
BmsI	GCATC	6 cut(s)	462, 1125, 1342, 1467, 1721, 1950
BmuI	ACTGGG	1 cut(s)	708
BpiI	GAAGAC	1 cut(s)	1230
BpmI	CTGGAG	2 cut(s)	343, 392
BpuEI	CTTGAG	1 cut(s)	1783
Bsa29I	ATCGAT	1 cut(s)	1553
BsaBI	GATNNNNATC	1 cut(s)	1157
BsaHI	GRCGYC	1 cut(s)	306
BsaI	GGTCTC	2 cut(s)	1053, 1413
BsaJI	CCNNGG	5 cut(s)	274, 771, 1605, 1729, 1892
BsaWI	WCCGGW	1 cut(s)	649
BsaXI	ACNNNNNCTCC	2 cut(s)	114, 144
Bsc4I	CCNNNNNNNGG	5 cut(s)	238, 298, 1188, 1207, 2258
Bse1I	ACTGG	3 cut(s)	714, 1245, 2360
Bse21I	CCTNAGG	2 cut(s)	2051, 2161
Bse3DI	GCAATG	3 cut(s)	281, 482, 2306
Bse8I	GATNNNNATC	1 cut(s)	1157
BseAI	TCCGGA	1 cut(s)	649
BseBI	CCWGG	6 cut(s)	275, 371, 773, 834, 972, 1202
BseCI	ATCGAT	1 cut(s)	1553
BseDI	CCNNGG	5 cut(s)	274, 771, 1605, 1729, 1892
BseGI	GGATG	8 cut(s)	270, 477, 595, 790, 1158, 1249, 1712, 1965
BseJI	GATNNNNATC	1 cut(s)	1157
BseLI	CCNNNNNNNGG	5 cut(s)	238, 298, 1188, 1207, 2258
BseMI	GCAATG	3 cut(s)	281, 482, 2306
BseMII	CTCAG	3 cut(s)	397, 1407, 1803
BseNI	ACTGG	3 cut(s)	714, 1245, 2360
BseRI	GAGGAG	5 cut(s)	119, 179, 184, 473, 476
BseSI	GKGCMC	2 cut(s)	281, 2069
BseXI	GCAGC	3 cut(s)	498, 1476, 2255
BseYI	CCCAGC	1 cut(s)	907
Bsh1236I	CGCG	1 cut(s)	453
Bsh1285I	CGRYCG	1 cut(s)	346
BshFI	GGCC	7 cut(s)	105, 176, 279, 302, 671, 954, 2154
BshNI	GGYRCC	1 cut(s)	1211
BshVI	ATCGAT	1 cut(s)	1553
BsiEI	CGRYCG	1 cut(s)	346
BsiHKAI	GWGCWC	3 cut(s)	45, 1620, 2106
BsiHKCI	CYCGRG	1 cut(s)	553
BsiSI	CCGG	3 cut(s)	24, 159, 650
BslFI	GGGAC	3 cut(s)	696, 1526, 1778
BslI	CCNNNNNNNGG	5 cut(s)	238, 298, 1188, 1207, 2258
BsmAI	GTCTC	6 cut(s)	386, 931, 1053, 1359, 1413, 1792
BsmFI	GGGAC	3 cut(s)	696, 1526, 1778
BsmI	GAATGC	2 cut(s)	1519, 2213
BsnI	GGCC	7 cut(s)	105, 176, 279, 302, 671, 954, 2154
Bso31I	GGTCTC	2 cut(s)	1053, 1413
BsoBI	CYCGRG	1 cut(s)	553
Bsp120I	GGGCCC	1 cut(s)	277
Bsp1286I	GDGCHC	5 cut(s)	45, 281, 1620, 2069, 2106
Bsp13I	TCCGGA	1 cut(s)	649
Bsp19I	CCATGG	1 cut(s)	1729
BspACI	CCGC	8 cut(s)	162, 232, 346, 367, 414, 417, 549, 2018
BspANI	GGCC	7 cut(s)	105, 176, 279, 302, 671, 954, 2154
BspCNI	CTCAG	3 cut(s)	396, 1406, 1802
BspDI	ATCGAT	1 cut(s)	1553
BspEI	TCCGGA	1 cut(s)	649
BspFNI	CGCG	1 cut(s)	453
BspLI	GGNNCC	8 cut(s)	279, 323, 358, 623, 1213, 1450, 2153, 2225
BspPI	GGATC	4 cut(s)	254, 616, 629, 1228
BspQI	GCTCTTC	2 cut(s)	827, 1434
BspT107I	GGYRCC	1 cut(s)	1211
BspTNI	GGTCTC	2 cut(s)	1053, 1413
BsrDI	GCAATG	3 cut(s)	281, 482, 2306
BsrI	ACTGG	3 cut(s)	714, 1245, 2360
BssECI	CCNNGG	5 cut(s)	274, 771, 1605, 1729, 1892
BssNI	GRCGYC	1 cut(s)	306
BssSI	CACGAG	2 cut(s)	1104, 1313
BssT1I	CCWWGG	2 cut(s)	1605, 1729
Bst2BI	CACGAG	2 cut(s)	1104, 1313
Bst2UI	CCWGG	6 cut(s)	275, 371, 773, 834, 972, 1202
Bst4CI	ACNGT	5 cut(s)	259, 637, 877, 1709, 1994
Bst6I	CTCTTC	5 cut(s)	432, 827, 1434, 1480, 2274
BstACI	GRCGYC	1 cut(s)	306
BstAPI	GCANNNNNTGC	1 cut(s)	1718
BstC8I	GCNNGC	6 cut(s)	174, 232, 406, 1090, 2016, 2065
BstDEI	CTNAG	7 cut(s)	383, 1393, 1789, 1900, 1979, 2051, 2161
BstDSI	CCRYGG	1 cut(s)	1729
BstF5I	GGATG	8 cut(s)	270, 477, 595, 790, 1158, 1249, 1712, 1965
BstFNI	CGCG	1 cut(s)	453
BstH2I	RGCGCY	3 cut(s)	99, 340, 390
BstHHI	GCGC	4 cut(s)	98, 339, 389, 453
BstMAI	GTCTC	6 cut(s)	386, 931, 1053, 1359, 1413, 1792
BstMCI	CGRYCG	1 cut(s)	346
BstMWI	GCNNNNNNNGC	5 cut(s)	102, 345, 354, 414, 1718
BstNI	CCWGG	6 cut(s)	275, 371, 773, 834, 972, 1202
BstNSI	RCATGY	1 cut(s)	1675
BstSCI	CCNGG	6 cut(s)	273, 369, 771, 832, 970, 1200
BstSFI	CTRYAG	2 cut(s)	2140, 2238
BstSLI	GKGCMC	2 cut(s)	281, 2069
BstUI	CGCG	1 cut(s)	453
BstV1I	GCAGC	3 cut(s)	498, 1476, 2255
BstV2I	GAAGAC	1 cut(s)	1230
BstX2I	RGATCY	3 cut(s)	621, 675, 1233
BstXI	CCANNNNNNTGG	2 cut(s)	679, 1509
BstYI	RGATCY	3 cut(s)	621, 675, 1233
Bsu15I	ATCGAT	1 cut(s)	1553
Bsu36I	CCTNAGG	2 cut(s)	2051, 2161
BsuRI	GGCC	7 cut(s)	105, 176, 279, 302, 671, 954, 2154
BsuTUI	ATCGAT	1 cut(s)	1553
BtgI	CCRYGG	1 cut(s)	1729
BtrI	CACGTC	1 cut(s)	898
BtsCI	GGATG	8 cut(s)	270, 477, 595, 790, 1158, 1249, 1712, 1965
BtsI	GCAGTG	3 cut(s)	415, 496, 815
BtsIMutI	CAGTG	6 cut(s)	415, 496, 815, 1168, 1238, 1714
Cac8I	GCNNGC	6 cut(s)	174, 232, 406, 1090, 2016, 2065
CaiI	CAGNNNCTG	1 cut(s)	817
CfoI	GCGC	4 cut(s)	98, 339, 389, 453
Cfr13I	GGNCC	6 cut(s)	175, 184, 277, 278, 1449, 2152
ClaI	ATCGAT	1 cut(s)	1553
Csp6I	GTAC	2 cut(s)	154, 1645
CviQI	GTAC	2 cut(s)	154, 1645
DdeI	CTNAG	7 cut(s)	383, 1393, 1789, 1900, 1979, 2051, 2161
EaeI	YGGCCR	2 cut(s)	300, 952
Eam1104I	CTCTTC	5 cut(s)	432, 827, 1434, 1480, 2274
EarI	CTCTTC	5 cut(s)	432, 827, 1434, 1480, 2274
EciI	GGCGGA	2 cut(s)	177, 432
Ecl136II	GAGCTC	2 cut(s)	43, 2104
Eco130I	CCWWGG	2 cut(s)	1605, 1729
Eco24I	GRGCYC	3 cut(s)	45, 281, 2106
Eco31I	GGTCTC	2 cut(s)	1053, 1413
Eco47I	GGWCC	2 cut(s)	184, 1449
Eco47III	AGCGCT	2 cut(s)	338, 388
Eco53kI	GAGCTC	2 cut(s)	43, 2104
Eco57I	CTGAAG	3 cut(s)	68, 794, 1632
Eco81I	CCTNAGG	2 cut(s)	2051, 2161
Eco88I	CYCGRG	1 cut(s)	553
EcoICRI	GAGCTC	2 cut(s)	43, 2104
EcoO109I	RGGNCCY	3 cut(s)	184, 277, 2152
EcoRI	GAATTC	1 cut(s)	1598
EcoRII	CCWGG	6 cut(s)	273, 369, 771, 832, 970, 1200
EcoT14I	CCWWGG	2 cut(s)	1605, 1729
EcoT22I	ATGCAT	1 cut(s)	1965
EcoT38I	GRGCYC	3 cut(s)	45, 281, 2106
ErhI	CCWWGG	2 cut(s)	1605, 1729
FaqI	GGGAC	3 cut(s)	696, 1526, 1778
FauI	CCCGC	1 cut(s)	239
FauNDI	CATATG	1 cut(s)	1965
FbaI	TGATCA	4 cut(s)	493, 592, 1276, 1915
Fnu4HI	GCNGC	5 cut(s)	415, 487, 550, 1465, 2244
FokI	GGATG	8 cut(s)	257, 484, 602, 797, 1165, 1256, 1699, 1972
FriOI	GRGCYC	3 cut(s)	45, 281, 2106
Fsp4HI	GCNGC	5 cut(s)	415, 487, 550, 1465, 2244
FspBI	CTAG	1 cut(s)	1343
GlaI	GCGC	4 cut(s)	97, 338, 388, 452
GluI	GCNGC	5 cut(s)	415, 487, 550, 1465, 2244
GsaI	CCCAGC	1 cut(s)	911
GsuI	CTGGAG	2 cut(s)	343, 392
HaeII	RGCGCY	3 cut(s)	99, 340, 390
HaeIII	GGCC	7 cut(s)	105, 176, 279, 302, 671, 954, 2154
HapII	CCGG	3 cut(s)	24, 159, 650
HhaI	GCGC	4 cut(s)	98, 339, 389, 453
Hin1I	GRCGYC	1 cut(s)	306
Hin6I	GCGC	4 cut(s)	96, 337, 387, 451
HinP1I	GCGC	4 cut(s)	96, 337, 387, 451
HinfI	GANTC	8 cut(s)	113, 379, 697, 709, 1124, 1185, 1330, 1555
HpaII	CCGG	3 cut(s)	24, 159, 650
HphI	GGTGA	5 cut(s)	626, 923, 1330, 1577, 1988
Hpy166II	GTNNAC	1 cut(s)	310
Hpy188I	TCNGA	4 cut(s)	471, 1152, 1324, 1525
Hpy8I	GTNNAC	1 cut(s)	310
Hpy99I	CGWCG	2 cut(s)	263, 308
HpyCH4III	ACNGT	5 cut(s)	259, 637, 877, 1709, 1994
HpyCH4IV	ACGT	4 cut(s)	306, 859, 897, 2341
HpyF10VI	GCNNNNNNNGC	5 cut(s)	102, 345, 354, 414, 1718
HpyF3I	CTNAG	7 cut(s)	383, 1393, 1789, 1900, 1979, 2051, 2161
HpySE526I	ACGT	4 cut(s)	306, 859, 897, 2341
Hsp92I	GRCGYC	1 cut(s)	306
HspAI	GCGC	4 cut(s)	96, 337, 387, 451
Kpn2I	TCCGGA	1 cut(s)	649
Ksp22I	TGATCA	4 cut(s)	493, 592, 1276, 1915
LguI	GCTCTTC	2 cut(s)	827, 1434
LmnI	GCTCC	7 cut(s)	40, 48, 132, 362, 373, 401, 2223
Lsp1109I	GCAGC	3 cut(s)	498, 1476, 2255
LweI	GCATC	6 cut(s)	462, 1125, 1342, 1467, 1721, 1950
MaeI	CTAG	1 cut(s)	1343
MaeII	ACGT	4 cut(s)	306, 859, 897, 2341
MaeIII	GTNAC	9 cut(s)	639, 795, 877, 1101, 1336, 1396, 1650, 1667, 1994
MfeI	CAATTG	1 cut(s)	1911
MflI	RGATCY	3 cut(s)	621, 675, 1233
MhlI	GDGCHC	5 cut(s)	45, 281, 1620, 2069, 2106
MlsI	TGGCCA	1 cut(s)	954
MluNI	TGGCCA	1 cut(s)	954
MlyI	GAGTC	6 cut(s)	107, 388, 706, 718, 1133, 1194
MmeI	TCCRAC	4 cut(s)	449, 511, 1662, 1937
Mox20I	TGGCCA	1 cut(s)	954
Mph1103I	ATGCAT	1 cut(s)	1965
MroI	TCCGGA	1 cut(s)	649
MroXI	GAANNNNTTC	2 cut(s)	1533, 2342
MscI	TGGCCA	1 cut(s)	954
MseI	TTAA	8 cut(s)	573, 585, 735, 1175, 1847, 1863, 1971, 2024
MslI	CAYNNNNRTG	4 cut(s)	1284, 1524, 1563, 1923
Msp20I	TGGCCA	1 cut(s)	954
MspA1I	CMGCKG	1 cut(s)	2018
MspI	CCGG	3 cut(s)	24, 159, 650
MspR9I	CCNGG	6 cut(s)	275, 371, 773, 834, 972, 1202
MunI	CAATTG	1 cut(s)	1911
Mva1269I	GAATGC	2 cut(s)	1519, 2213
MvaI	CCWGG	6 cut(s)	275, 371, 773, 834, 972, 1202
MvnI	CGCG	1 cut(s)	453
MwoI	GCNNNNNNNGC	5 cut(s)	102, 345, 354, 414, 1718
NcoI	CCATGG	1 cut(s)	1729
NdeI	CATATG	1 cut(s)	1965
NlaIV	GGNNCC	8 cut(s)	279, 323, 358, 623, 1213, 1450, 2153, 2225
NmeAIII	GCCGAG	1 cut(s)	1873
NmuCI	GTSAC	5 cut(s)	639, 795, 1101, 1336, 1994
NsiI	ATGCAT	1 cut(s)	1965
NspI	RCATGY	1 cut(s)	1675
PciSI	GCTCTTC	2 cut(s)	827, 1434
PcsI	WCGNNNNNNNCGW	1 cut(s)	255
PctI	GAATGC	2 cut(s)	1519, 2213
PdmI	GAANNNNTTC	2 cut(s)	1533, 2342
PfeI	GAWTC	2 cut(s)	1330, 1555
PflMI	CCANNNNNTGG	2 cut(s)	298, 2258
PfoI	TCCNGGA	1 cut(s)	1200
PkrI	GCNGC	5 cut(s)	416, 488, 551, 1466, 2245
PleI	GAGTC	6 cut(s)	107, 387, 705, 717, 1132, 1193
PpsI	GAGTC	6 cut(s)	107, 387, 705, 717, 1132, 1193
PpuMI	RGGWCCY	1 cut(s)	184
PshBI	ATTAAT	1 cut(s)	1863
Psp124BI	GAGCTC	2 cut(s)	45, 2106
Psp1406I	AACGTT	1 cut(s)	2341
Psp5II	RGGWCCY	1 cut(s)	184
Psp6I	CCWGG	6 cut(s)	273, 369, 771, 832, 970, 1200
PspFI	CCCAGC	1 cut(s)	907
PspGI	CCWGG	6 cut(s)	273, 369, 771, 832, 970, 1200
PspN4I	GGNNCC	8 cut(s)	279, 323, 358, 623, 1213, 1450, 2153, 2225
PspOMI	GGGCCC	1 cut(s)	277
PspPI	GGNCC	6 cut(s)	175, 184, 277, 278, 1449, 2152
PspPPI	RGGWCCY	1 cut(s)	184
PstNI	CAGNNNCTG	1 cut(s)	817
PsuI	RGATCY	3 cut(s)	621, 675, 1233
RsaI	GTAC	2 cut(s)	155, 1646
RsaNI	GTAC	2 cut(s)	154, 1645
RseI	CAYNNNNRTG	4 cut(s)	1284, 1524, 1563, 1923
SacI	GAGCTC	2 cut(s)	45, 2106
SapI	GCTCTTC	2 cut(s)	827, 1434
SaqAI	TTAA	8 cut(s)	573, 585, 735, 1175, 1847, 1863, 1971, 2024
SatI	GCNGC	5 cut(s)	415, 487, 550, 1465, 2244
Sau96I	GGNCC	6 cut(s)	175, 184, 277, 278, 1449, 2152
ScaI	AGTACT	2 cut(s)	155, 1646
SchI	GAGTC	6 cut(s)	107, 388, 706, 718, 1133, 1194
ScrFI	CCNGG	6 cut(s)	275, 371, 773, 834, 972, 1202
SduI	GDGCHC	5 cut(s)	45, 281, 1620, 2069, 2106
SfaNI	GCATC	6 cut(s)	462, 1125, 1342, 1467, 1721, 1950
SfcI	CTRYAG	2 cut(s)	2140, 2238
SinI	GGWCC	2 cut(s)	184, 1449
SmiMI	CAYNNNNRTG	4 cut(s)	1284, 1524, 1563, 1923
SmlI	CTYRAG	1 cut(s)	1762
SmoI	CTYRAG	1 cut(s)	1762
SsiI	CCGC	8 cut(s)	162, 232, 346, 367, 414, 417, 549, 2018
SspMI	CTAG	1 cut(s)	1343
SstI	GAGCTC	2 cut(s)	45, 2106
StyD4I	CCNGG	6 cut(s)	273, 369, 771, 832, 970, 1200
StyI	CCWWGG	2 cut(s)	1605, 1729
TaaI	ACNGT	5 cut(s)	259, 637, 877, 1709, 1994
TaiI	ACGT	4 cut(s)	309, 862, 900, 2344
TaqI	TCGA	9 cut(s)	249, 342, 601, 1543, 1553, 1590, 1875, 1935, 2346
TatI	WGTACW	2 cut(s)	153, 1644
TauI	GCSGC	2 cut(s)	417, 552
TfiI	GAWTC	2 cut(s)	1330, 1555
Tru1I	TTAA	8 cut(s)	573, 585, 735, 1175, 1847, 1863, 1971, 2024
Tru9I	TTAA	8 cut(s)	573, 585, 735, 1175, 1847, 1863, 1971, 2024
TscAI	CASTG	6 cut(s)	415, 496, 822, 1168, 1245, 1714
TseFI	GTSAC	5 cut(s)	639, 795, 1101, 1336, 1994
TseI	GCWGC	3 cut(s)	486, 1464, 2243
Tsp45I	GTSAC	5 cut(s)	639, 795, 1101, 1336, 1994
TspGWI	ACGGA	2 cut(s)	53, 1441
TspRI	CASTG	6 cut(s)	415, 496, 822, 1168, 1245, 1714
Van91I	CCANNNNNTGG	2 cut(s)	298, 2258
VpaK11BI	GGWCC	2 cut(s)	184, 1449
VspI	ATTAAT	1 cut(s)	1863
XapI	RAATTY	5 cut(s)	866, 1598, 1627, 1750, 2233
XceI	RCATGY	1 cut(s)	1675
XcmI	CCANNNNNNNNNTGG	3 cut(s)	367, 895, 947
XmnI	GAANNNNTTC	2 cut(s)	1533, 2342
XspI	CTAG	1 cut(s)	1343
ZraI	GACGTC	1 cut(s)	307
ZrmI	AGTACT	2 cut(s)	155, 1646
Zsp2I	ATGCAT	1 cut(s)	1965

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.