Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0009528

Physical Location & Seq

Genomic Coordinates Forward (+)

59926388 .. 59928331

Gene Structure 1944 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G035380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGCAGTTGCAGACTTCTTCGCCGGAGAGATTATCACGGAGCTCCTGAAGAACCTGATAGCCATATCCAAAAAATCATGGCAGTTCAAAGACAGCGCCAACGGCCTCAAAGACTCCATAGAACAGCTCCTCCCCATAATCCAAGAAATCAAGTACCCCGGCGTCGAGTTGACGGCCATCCGCCAGTTTCAGCTCGACCGTATCTCGGAGACTCTCCGGCAGGGACATGAGCTGGCCCACAAGGTCCTCCTCTCCTCTCGCTACAACATTTACAAGAACCTCCAATATGCCCGCAAGATGGAGAGGATCGAAAAGACCGTCGCCAAGTTTTCCAGGGCCCATTGCAGGCCCATCTTGGCCGACGTCCACCACATAAGGTTCCAGACCACCGAGCGCTTCGACCGCCTTGAAGGCTCCAGCTACCGCCTGGAGCAGAGTCTCAGCGCTATGAAGATTGGAGCTTGCAGTGGCGGCGGAGGTGTGTCGTGGGTGGAAGAGGCTGTGAGGCGCGTGGAGGAGGAGGGTCGGATGCAATGGGAGAGCAGCAGTGAGTTGGTTTTGGGCTTGGGTTTCGGGTTGAAGAAAGTCAAGGAAATGGTTCTTGGCAGAGATGACTTGTTCGTTGGAATTAGTGGGATTGGCGGCTCGGGAAAAACCACTCTTGTTAAGGAGTTGATTAAGGATGATCATGTTCGATCTTACTTTGGTGAGAGGATCCTGTTCCTAACGGTGTCACAATCTCCGGATATAGAGGATTTGAAGGCCAAGATCTTGGGGTTCATTATGGGGAGTCAAGTTTTGAGTCCCAGTTCTGTGCTTCCTCAAATTAACTTTCAGTTTGAATGGAGAAACCCAACAAAGACCCTGGTGGTTTTGGATGATGTTTGGTCACTTTCAACGCTTCAGCCACTGATCTTCAACATTCCTGGTTGTAAAACCCTTGTGGTTTCACGTTTCAAATTCCAAACAGTAACAAAAGCCACCTATGACGTGGAGTTGCTGGGTGAAGATGAAGCAGTCTCTCTGTTTTGCCACTCTGCTTTTGGCCAAAAGTTCATTCCTCCTGGTGCTGATAAGAAATTGGTCAAGCAGATTGTTGATGAGTGTAAGAGGCTTCCTTTGGCTCTCAAAGTGATTGGGTCTTCTTTACGAGACCAGCCTGAAATGATTTGGGTAAATGCAAGCAAAAGGTTGTCACGAGGGGAAAGCATCGGCGAGTCGCATGAGAACAACCTACTTGATCGGATGGCAATCAGTGTGAAATGCTTAAGCCCCAGAGTCAGGGAATGTTTCCTGGATTTGGGTGCCTTTCCAGAAGGCAAGAAGATCCCACTGGATGTTCTTATCAACATTTGGGTTGAAACCCATGATCACATTGATGAAGAACAAGCCTATGCCATTCTTCACAAGCTTTCGGACAAGAATCTTGTCACCCTAGTAAAAGATGCAAGAGATGGAGACATATATACCAGTTTCTGTGACATCTCAGTTACACAACATGATGTCTTGCGAGACCTTGCTCTTCATTTGAGTAATAATGGCTCTGTAAATCAACGCAGCCGATTACTGATGCCGATTAATAATGGCTGTGCCCTGTTTCCACCATCTTCTCCATCTTCTTGTTTTAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006793 GO:0006796 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009987 GO:0010035 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0023052 GO:0042221 GO:0042742 GO:0043207 GO:0044237 GO:0044464 GO:0048046 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0080167 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC RPW8

Protein Analysis

543

Amino Acids

61.01

Weight (kDa)

7.19

Isoelectric Point (pI)

47.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	9 - 112	5.1e-11	Arabidopsis broad-spectrum mildew resistance protein RPW8
NB-ARC	PF00931	195 - 350	1e-15	NB-ARC domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009528)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33300 AT4G33300
fragaria_vesca	FvH4_2g40720
malus_domestica	MD08G1041800.v1.1 MD08G1042400.v1.1 MD08G1042500.v1.1
prunus_persica	Prupe.1G389500_v2.0.a1
pyrus_communis	pycom08g03380 pycom08g03410 pycom08g03430 pycom08g03440
rosa_chinensis	RchiOBHm_Chr6g0299881
rosa_laevigata	RLG00000011379
rosa_multiflora	Rmu_ssc0000158.1_g000014
rosa_roxburghii	Rroxscaffold_7G00168310
rosa_rugosa	Rorug06G0293000
rosa_samantha	Rh6AG404300 Rh6BG412500 Rh6CG418500 Rh6DG405400
rosa_wichuraiana	Rw6G035360 Rw6G035380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	366
AccB1I	GGYRCC	1 cut(s)	1304
AccII	CGCG	1 cut(s)	510
AccIII	TCCGGA	1 cut(s)	742
AciI	CCGC	7 cut(s)	181, 292, 403, 424, 471, 474, 642
AclWI	GGATC	4 cut(s)	314, 709, 722, 1321
AcoI	YGGCCR	3 cut(s)	174, 357, 1045
AcsI	RAATTY	1 cut(s)	959
AcuI	CTGAAG	2 cut(s)	68, 887
AcyI	GRCGYC	2 cut(s)	162, 363
AfaI	GTAC	1 cut(s)	155
AfeI	AGCGCT	2 cut(s)	395, 445
AfiI	CCNNNNNNNGG	5 cut(s)	205, 298, 345, 1281, 1300
AflII	CTTAAG	1 cut(s)	1267
AgsI	TTSAA	9 cut(s)	88, 410, 580, 760, 842, 897, 919, 958, 1361
AjiI	CACGTC	1 cut(s)	991
AjnI	CCWGG	6 cut(s)	332, 426, 864, 925, 1063, 1293
AjuI	GAANNNNNNNTTGG	4 cut(s)	585, 617, 1041, 1073
AloI	GAACNNNNNNTCC	2 cut(s)	114, 146
AluBI	AGCT	7 cut(s)	43, 127, 193, 232, 420, 461, 1411
AluI	AGCT	7 cut(s)	43, 127, 193, 232, 420, 461, 1411
Alw21I	GWGCWC	1 cut(s)	45
Alw26I	GTCTC	6 cut(s)	203, 443, 1024, 1146, 1452, 1506
AlwI	GGATC	4 cut(s)	314, 709, 722, 1321
AlwNI	CAGNNNCTG	2 cut(s)	910, 1476
Ama87I	CYCGRG	1 cut(s)	646
Aor13HI	TCCGGA	1 cut(s)	742
Aor51HI	AGCGCT	2 cut(s)	395, 445
AoxI	GGCC	8 cut(s)	103, 174, 234, 336, 347, 357, 762, 1045
ApaI	GGGCCC	1 cut(s)	340
ApeKI	GCWGC	2 cut(s)	543, 1557
ApoI	RAATTY	1 cut(s)	959
ArsI	GACNNNNNNTTYG	2 cut(s)	303, 335
AseI	ATTAAT	1 cut(s)	1578
Asp700I	GAANNNNTTC	1 cut(s)	597
AspLEI	GCGC	4 cut(s)	98, 396, 446, 510
AspS9I	GGNCC	5 cut(s)	235, 244, 336, 337, 348
AsuC2I	CCSGG	1 cut(s)	159
AsuHPI	GGTGA	3 cut(s)	719, 1016, 1423
AvaI	CYCGRG	1 cut(s)	646
AvaII	GGWCC	1 cut(s)	244
BaeGI	GKGCMC	2 cut(s)	340, 1594
BalI	TGGCCA	1 cut(s)	1047
BamHI	GGATCC	1 cut(s)	714
BanI	GGYRCC	1 cut(s)	1304
BanII	GRGCYC	2 cut(s)	45, 340
BauI	CACGAG	1 cut(s)	1197
BbsI	GAAGAC	1 cut(s)	1134
Bbv12I	GWGCWC	1 cut(s)	45
BbvI	GCAGC	2 cut(s)	555, 1569
BccI	CCATC	7 cut(s)	185, 292, 359, 1240, 1448, 1612, 1621
BceAI	ACGGC	2 cut(s)	118, 189
BciT130I	CCWGG	6 cut(s)	334, 428, 866, 927, 1065, 1295
BclI	TGATCA	2 cut(s)	685, 1369
BcnI	CCSGG	1 cut(s)	159
BcoDI	GTCTC	6 cut(s)	203, 443, 1024, 1146, 1452, 1506
BfaI	CTAG	2 cut(s)	1436, 1630
BfoI	RGCGCY	3 cut(s)	99, 397, 447
BfrI	CTTAAG	1 cut(s)	1267
BglI	GCCNNNNNGGC	1 cut(s)	411
BglII	AGATCT	1 cut(s)	768
BisI	GCNGC	4 cut(s)	472, 544, 643, 1558
BlsI	GCNGC	4 cut(s)	473, 545, 644, 1559
Bme1390I	CCNGG	7 cut(s)	159, 334, 428, 866, 927, 1065, 1295
Bme18I	GGWCC	1 cut(s)	244
BmeT110I	CYCGRG	1 cut(s)	646
BmgBI	CACGTC	1 cut(s)	991
BmgT120I	GGNCC	5 cut(s)	235, 244, 336, 337, 348
BmiI	GGNNCC	5 cut(s)	338, 380, 415, 716, 1306
BmrFI	CCNGG	7 cut(s)	159, 334, 428, 866, 927, 1065, 1295
BmrI	ACTGGG	1 cut(s)	801
BmsI	GCATC	4 cut(s)	519, 1218, 1435, 1560
BmuI	ACTGGG	1 cut(s)	801
BpiI	GAAGAC	1 cut(s)	1134
BpmI	CTGGAG	2 cut(s)	400, 449
BpuMI	CCSGG	1 cut(s)	159
BsaBI	GATNNNNATC	1 cut(s)	1250
BsaHI	GRCGYC	2 cut(s)	162, 363
BsaI	GGTCTC	2 cut(s)	1146, 1506
BsaJI	CCNNGG	3 cut(s)	157, 333, 864
BsaWI	WCCGGW	1 cut(s)	742
BsaXI	ACNNNNNCTCC	2 cut(s)	114, 144
Bsc4I	CCNNNNNNNGG	5 cut(s)	205, 298, 345, 1281, 1300
Bse1I	ACTGG	4 cut(s)	184, 807, 1338, 1470
Bse3DI	GCAATG	2 cut(s)	340, 539
Bse8I	GATNNNNATC	1 cut(s)	1250
BseAI	TCCGGA	1 cut(s)	742
BseBI	CCWGG	6 cut(s)	334, 428, 866, 927, 1065, 1295
BseDI	CCNNGG	3 cut(s)	157, 333, 864
BseGI	GGATG	6 cut(s)	177, 534, 688, 883, 1251, 1342
BseJI	GATNNNNATC	1 cut(s)	1250
BseLI	CCNNNNNNNGG	5 cut(s)	205, 298, 345, 1281, 1300
BseMI	GCAATG	2 cut(s)	340, 539
BseMII	CTCAG	2 cut(s)	454, 1500
BseNI	ACTGG	4 cut(s)	184, 807, 1338, 1470
BseRI	GAGGAG	5 cut(s)	119, 239, 244, 530, 533
BseSI	GKGCMC	2 cut(s)	340, 1594
BseXI	GCAGC	2 cut(s)	555, 1569
BseYI	CCCAGC	1 cut(s)	1000
Bsh1236I	CGCG	1 cut(s)	510
Bsh1285I	CGRYCG	2 cut(s)	199, 403
BshFI	GGCC	8 cut(s)	105, 176, 236, 338, 349, 359, 764, 1047
BshNI	GGYRCC	1 cut(s)	1304
BsiEI	CGRYCG	2 cut(s)	199, 403
BsiHKAI	GWGCWC	1 cut(s)	45
BsiHKCI	CYCGRG	1 cut(s)	646
BsiSI	CCGG	4 cut(s)	24, 159, 217, 743
BslFI	GGGAC	2 cut(s)	237, 789
BslI	CCNNNNNNNGG	5 cut(s)	205, 298, 345, 1281, 1300
BsmAI	GTCTC	6 cut(s)	203, 443, 1024, 1146, 1452, 1506
BsmFI	GGGAC	2 cut(s)	237, 789
BsnI	GGCC	8 cut(s)	105, 176, 236, 338, 349, 359, 764, 1047
Bso31I	GGTCTC	2 cut(s)	1146, 1506
BsoBI	CYCGRG	1 cut(s)	646
Bsp120I	GGGCCC	1 cut(s)	336
Bsp1286I	GDGCHC	3 cut(s)	45, 340, 1594
Bsp13I	TCCGGA	1 cut(s)	742
Bsp143I	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
BspACI	CCGC	7 cut(s)	181, 292, 403, 424, 471, 474, 642
BspANI	GGCC	8 cut(s)	105, 176, 236, 338, 349, 359, 764, 1047
BspCNI	CTCAG	2 cut(s)	453, 1499
BspEI	TCCGGA	1 cut(s)	742
BspFNI	CGCG	1 cut(s)	510
BspLI	GGNNCC	5 cut(s)	338, 380, 415, 716, 1306
BspPI	GGATC	4 cut(s)	314, 709, 722, 1321
BspQI	GCTCTTC	1 cut(s)	1527
BspT107I	GGYRCC	1 cut(s)	1304
BspTI	CTTAAG	1 cut(s)	1267
BspTNI	GGTCTC	2 cut(s)	1146, 1506
BsrDI	GCAATG	2 cut(s)	340, 539
BsrI	ACTGG	4 cut(s)	184, 807, 1338, 1470
BssECI	CCNNGG	3 cut(s)	157, 333, 864
BssMI	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
BssNI	GRCGYC	2 cut(s)	162, 363
BssSI	CACGAG	1 cut(s)	1197
Bst2BI	CACGAG	1 cut(s)	1197
Bst2UI	CCWGG	6 cut(s)	334, 428, 866, 927, 1065, 1295
Bst4CI	ACNGT	4 cut(s)	200, 319, 730, 970
Bst6I	CTCTTC	2 cut(s)	489, 1527
BstACI	GRCGYC	2 cut(s)	162, 363
BstAFI	CTTAAG	1 cut(s)	1267
BstC8I	GCNNGC	5 cut(s)	234, 292, 347, 463, 1183
BstDEI	CTNAG	2 cut(s)	440, 1486
BstF5I	GGATG	6 cut(s)	177, 534, 688, 883, 1251, 1342
BstFNI	CGCG	1 cut(s)	510
BstH2I	RGCGCY	3 cut(s)	99, 397, 447
BstHHI	GCGC	4 cut(s)	98, 396, 446, 510
BstKTI	GATC	9 cut(s)	309, 688, 698, 717, 771, 915, 1243, 1329, 1372
BstMAI	GTCTC	6 cut(s)	203, 443, 1024, 1146, 1452, 1506
BstMBI	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
BstMCI	CGRYCG	2 cut(s)	199, 403
BstMWI	GCNNNNNNNGC	4 cut(s)	102, 402, 411, 471
BstNI	CCWGG	6 cut(s)	334, 428, 866, 927, 1065, 1295
BstSCI	CCNGG	7 cut(s)	157, 332, 426, 864, 925, 1063, 1293
BstSLI	GKGCMC	2 cut(s)	340, 1594
BstUI	CGCG	1 cut(s)	510
BstV1I	GCAGC	2 cut(s)	555, 1569
BstV2I	GAAGAC	1 cut(s)	1134
BstX2I	RGATCY	3 cut(s)	714, 768, 1326
BstXI	CCANNNNNNTGG	1 cut(s)	772
BstYI	RGATCY	3 cut(s)	714, 768, 1326
BsuRI	GGCC	8 cut(s)	105, 176, 236, 338, 349, 359, 764, 1047
BtrI	CACGTC	1 cut(s)	991
BtsCI	GGATG	6 cut(s)	177, 534, 688, 883, 1251, 1342
BtsI	GCAGTG	2 cut(s)	472, 553
BtsIMutI	CAGTG	5 cut(s)	472, 553, 908, 1261, 1331
Cac8I	GCNNGC	5 cut(s)	234, 292, 347, 463, 1183
CaiI	CAGNNNCTG	2 cut(s)	910, 1476
CfoI	GCGC	4 cut(s)	98, 396, 446, 510
Cfr13I	GGNCC	5 cut(s)	235, 244, 336, 337, 348
CseI	GACGC	1 cut(s)	151
Csp6I	GTAC	1 cut(s)	154
CviAII	CATG	6 cut(s)	78, 227, 689, 1223, 1367, 1499
CviQI	GTAC	1 cut(s)	154
DdeI	CTNAG	2 cut(s)	440, 1486
DpnI	GATC	9 cut(s)	308, 687, 697, 716, 770, 914, 1242, 1328, 1371
DpnII	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
EaeI	YGGCCR	3 cut(s)	174, 357, 1045
Eam1104I	CTCTTC	2 cut(s)	489, 1527
EarI	CTCTTC	2 cut(s)	489, 1527
EciI	GGCGGA	2 cut(s)	170, 489
Ecl136II	GAGCTC	1 cut(s)	43
Eco24I	GRGCYC	2 cut(s)	45, 340
Eco31I	GGTCTC	2 cut(s)	1146, 1506
Eco47I	GGWCC	1 cut(s)	244
Eco47III	AGCGCT	2 cut(s)	395, 445
Eco53kI	GAGCTC	1 cut(s)	43
Eco57I	CTGAAG	2 cut(s)	68, 887
Eco88I	CYCGRG	1 cut(s)	646
EcoICRI	GAGCTC	1 cut(s)	43
EcoO109I	RGGNCCY	2 cut(s)	244, 336
EcoRII	CCWGG	6 cut(s)	332, 426, 864, 925, 1063, 1293
EcoT38I	GRGCYC	2 cut(s)	45, 340
FaeI	CATG	6 cut(s)	81, 230, 692, 1226, 1370, 1502
FaqI	GGGAC	2 cut(s)	237, 789
FatI	CATG	6 cut(s)	77, 226, 688, 1222, 1366, 1498
FauI	CCCGC	1 cut(s)	299
FbaI	TGATCA	2 cut(s)	685, 1369
Fnu4HI	GCNGC	4 cut(s)	472, 544, 643, 1558
FokI	GGATG	6 cut(s)	164, 541, 695, 890, 1258, 1349
FriOI	GRGCYC	2 cut(s)	45, 340
Fsp4HI	GCNGC	4 cut(s)	472, 544, 643, 1558
FspBI	CTAG	2 cut(s)	1436, 1630
GlaI	GCGC	4 cut(s)	97, 395, 445, 509
GluI	GCNGC	4 cut(s)	472, 544, 643, 1558
GsaI	CCCAGC	1 cut(s)	1004
GsuI	CTGGAG	2 cut(s)	400, 449
HaeII	RGCGCY	3 cut(s)	99, 397, 447
HaeIII	GGCC	8 cut(s)	105, 176, 236, 338, 349, 359, 764, 1047
HapII	CCGG	4 cut(s)	24, 159, 217, 743
HgaI	GACGC	1 cut(s)	151
HhaI	GCGC	4 cut(s)	98, 396, 446, 510
Hin1I	GRCGYC	2 cut(s)	162, 363
Hin1II	CATG	6 cut(s)	81, 230, 692, 1226, 1370, 1502
Hin6I	GCGC	4 cut(s)	96, 394, 444, 508
HinP1I	GCGC	4 cut(s)	96, 394, 444, 508
HincII	GTYRAC	1 cut(s)	171
HindII	GTYRAC	1 cut(s)	171
HindIII	AAGCTT	1 cut(s)	1409
HinfI	GANTC	8 cut(s)	113, 211, 436, 790, 802, 1217, 1278, 1423
HpaII	CCGG	4 cut(s)	24, 159, 217, 743
HphI	GGTGA	3 cut(s)	719, 1016, 1423
Hpy166II	GTNNAC	2 cut(s)	171, 367
Hpy188I	TCNGA	4 cut(s)	208, 528, 1245, 1417
Hpy188III	TCNNGA	6 cut(s)	46, 382, 648, 743, 1197, 1313
Hpy8I	GTNNAC	2 cut(s)	171, 367
Hpy99I	CGWCG	3 cut(s)	167, 323, 365
HpyAV	CCTTC	3 cut(s)	404, 754, 1310
HpyCH4III	ACNGT	4 cut(s)	200, 319, 730, 970
HpyCH4IV	ACGT	3 cut(s)	363, 952, 990
HpyCH4V	TGCA	6 cut(s)	11, 345, 465, 532, 1181, 1448
HpyF10VI	GCNNNNNNNGC	4 cut(s)	102, 402, 411, 471
HpyF3I	CTNAG	2 cut(s)	440, 1486
HpySE526I	ACGT	3 cut(s)	363, 952, 990
Hsp92I	GRCGYC	2 cut(s)	162, 363
Hsp92II	CATG	6 cut(s)	81, 230, 692, 1226, 1370, 1502
HspAI	GCGC	4 cut(s)	96, 394, 444, 508
Kpn2I	TCCGGA	1 cut(s)	742
Ksp22I	TGATCA	2 cut(s)	685, 1369
Kzo9I	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
LguI	GCTCTTC	1 cut(s)	1527
LmnI	GCTCC	6 cut(s)	40, 48, 132, 419, 430, 458
Lsp1109I	GCAGC	2 cut(s)	555, 1569
LweI	GCATC	4 cut(s)	519, 1218, 1435, 1560
MaeI	CTAG	2 cut(s)	1436, 1630
MaeII	ACGT	3 cut(s)	363, 952, 990
MaeIII	GTNAC	7 cut(s)	732, 888, 970, 1194, 1429, 1478, 1489
MalI	GATC	9 cut(s)	308, 687, 697, 716, 770, 914, 1242, 1328, 1371
MboI	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
MflI	RGATCY	3 cut(s)	714, 768, 1326
MhlI	GDGCHC	3 cut(s)	45, 340, 1594
MlsI	TGGCCA	1 cut(s)	1047
MluCI	AATT	4 cut(s)	627, 825, 959, 1079
MluNI	TGGCCA	1 cut(s)	1047
MlyI	GAGTC	7 cut(s)	107, 205, 445, 799, 811, 1226, 1287
MmeI	TCCRAC	2 cut(s)	506, 604
Mox20I	TGGCCA	1 cut(s)	1047
MroI	TCCGGA	1 cut(s)	742
MroXI	GAANNNNTTC	1 cut(s)	597
MscI	TGGCCA	1 cut(s)	1047
MseI	TTAA	6 cut(s)	666, 678, 828, 1268, 1578, 1626
MslI	CAYNNNNRTG	1 cut(s)	1377
Msp20I	TGGCCA	1 cut(s)	1047
MspCI	CTTAAG	1 cut(s)	1267
MspI	CCGG	4 cut(s)	24, 159, 217, 743
MspR9I	CCNGG	7 cut(s)	159, 334, 428, 866, 927, 1065, 1295
MvaI	CCWGG	6 cut(s)	334, 428, 866, 927, 1065, 1295
MvnI	CGCG	1 cut(s)	510
MwoI	GCNNNNNNNGC	4 cut(s)	102, 402, 411, 471
NciI	CCSGG	1 cut(s)	159
NdeII	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
NlaIII	CATG	6 cut(s)	81, 230, 692, 1226, 1370, 1502
NlaIV	GGNNCC	5 cut(s)	338, 380, 415, 716, 1306
NmuCI	GTSAC	5 cut(s)	732, 888, 1194, 1429, 1478
PciSI	GCTCTTC	1 cut(s)	1527
PcsI	WCGNNNNNNNCGW	1 cut(s)	315
PdmI	GAANNNNTTC	1 cut(s)	597
PfeI	GAWTC	1 cut(s)	1423
PfoI	TCCNGGA	1 cut(s)	1293
PkrI	GCNGC	4 cut(s)	473, 545, 644, 1559
PleI	GAGTC	7 cut(s)	107, 205, 444, 798, 810, 1225, 1286
PpsI	GAGTC	7 cut(s)	107, 205, 444, 798, 810, 1225, 1286
PpuMI	RGGWCCY	1 cut(s)	244
PshBI	ATTAAT	1 cut(s)	1578
Psp124BI	GAGCTC	1 cut(s)	45
Psp5II	RGGWCCY	1 cut(s)	244
Psp6I	CCWGG	6 cut(s)	332, 426, 864, 925, 1063, 1293
PspFI	CCCAGC	1 cut(s)	1000
PspGI	CCWGG	6 cut(s)	332, 426, 864, 925, 1063, 1293
PspN4I	GGNNCC	5 cut(s)	338, 380, 415, 716, 1306
PspOMI	GGGCCC	1 cut(s)	336
PspPI	GGNCC	5 cut(s)	235, 244, 336, 337, 348
PspPPI	RGGWCCY	1 cut(s)	244
PstNI	CAGNNNCTG	2 cut(s)	910, 1476
PsuI	RGATCY	3 cut(s)	714, 768, 1326
RsaI	GTAC	1 cut(s)	155
RsaNI	GTAC	1 cut(s)	154
RseI	CAYNNNNRTG	1 cut(s)	1377
SacI	GAGCTC	1 cut(s)	45
SapI	GCTCTTC	1 cut(s)	1527
SaqAI	TTAA	6 cut(s)	666, 678, 828, 1268, 1578, 1626
SatI	GCNGC	4 cut(s)	472, 544, 643, 1558
Sau3AI	GATC	9 cut(s)	306, 685, 695, 714, 768, 912, 1240, 1326, 1369
Sau96I	GGNCC	5 cut(s)	235, 244, 336, 337, 348
SchI	GAGTC	7 cut(s)	107, 205, 445, 799, 811, 1226, 1287
ScrFI	CCNGG	7 cut(s)	159, 334, 428, 866, 927, 1065, 1295
SduI	GDGCHC	3 cut(s)	45, 340, 1594
SfaNI	GCATC	4 cut(s)	519, 1218, 1435, 1560
SinI	GGWCC	1 cut(s)	244
SmiMI	CAYNNNNRTG	1 cut(s)	1377
SmlI	CTYRAG	1 cut(s)	1267
SmoI	CTYRAG	1 cut(s)	1267
Sse9I	AATT	4 cut(s)	627, 825, 959, 1079
SsiI	CCGC	7 cut(s)	181, 292, 403, 424, 471, 474, 642
SspMI	CTAG	2 cut(s)	1436, 1630
SstI	GAGCTC	1 cut(s)	45
StyD4I	CCNGG	7 cut(s)	157, 332, 426, 864, 925, 1063, 1293
TaaI	ACNGT	4 cut(s)	200, 319, 730, 970
TaiI	ACGT	3 cut(s)	366, 955, 993
TaqI	TCGA	5 cut(s)	165, 195, 309, 399, 694
TasI	AATT	4 cut(s)	627, 825, 959, 1079
TauI	GCSGC	2 cut(s)	474, 645
TfiI	GAWTC	1 cut(s)	1423
Tru1I	TTAA	6 cut(s)	666, 678, 828, 1268, 1578, 1626
Tru9I	TTAA	6 cut(s)	666, 678, 828, 1268, 1578, 1626
TscAI	CASTG	5 cut(s)	472, 553, 915, 1261, 1338
TseFI	GTSAC	5 cut(s)	732, 888, 1194, 1429, 1478
TseI	GCWGC	2 cut(s)	543, 1557
Tsp45I	GTSAC	5 cut(s)	732, 888, 1194, 1429, 1478
TspDTI	ATGAA	6 cut(s)	464, 769, 1026, 1045, 1395, 1514
TspGWI	ACGGA	1 cut(s)	53
TspRI	CASTG	5 cut(s)	472, 553, 915, 1261, 1338
Vha464I	CTTAAG	1 cut(s)	1267
VpaK11BI	GGWCC	1 cut(s)	244
VspI	ATTAAT	1 cut(s)	1578
XapI	RAATTY	1 cut(s)	959
XcmI	CCANNNNNNNNNTGG	3 cut(s)	424, 988, 1040
XmnI	GAANNNNTTC	1 cut(s)	597
XspI	CTAG	2 cut(s)	1436, 1630
ZraI	GACGTC	1 cut(s)	364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.