AT4G34040

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0002668
Physical Location & Seq
Reverse (-)
16304215 .. 16308801
4587 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G34040.1

Sequence Viewer

Length: 2001 bp
ATGCAAGGTCCACGAAGCACTGGTGATTCATCGACTGGAATAAATTATGCAGATGGAGAACCCATCTGTAGCACCAATTCAGAGACTACTTCCAATAACATCCTGAATCCAGTGGATGTTCAGTTTCCAAACAATACTACAGGTTCAGGACGACCAACTTACGCAAGCTCTAGCTCGCATGTTGTTCAAAATCATAACTGGTGGAGTTTTGGTGAATCCAGCTCTAGATTGGGGCCTTCTGATCATTTAAATTCCAATGGTTCAAAGACTGATCGACAGCTTCTCTCAGATGGCTATGGATTTGAGGAAGGGCAATCAGGTATGTTGTTACCTGGAGAGTCCTTTTTGCGTGGGTCAAGCTCTAGTCATATGTTAAGTCATGTAAATCTGGGCAAGGACATGGACATTGGTAGTGGTCTGCAGACTTCTGGGGTCGTTATCCGCCATAATAACTGCGAGACTTCATTGGGAAGCTCAAGTCAAACCGCAGAGGAGAGAAGCAGTGGTCCAGGTTCTTCGTTGGGTGGTCTAGGTTCATCCTGCAAAAGAAAGGCTCTTGAAGGAGCTCCTAGCCATTCTTTCCCTGGTGAAAGTCATGGTTGCTTTTTTCAAACTGAGAATGGTGCTTGGAATGAGGGTCTTGCTCAATATGATGCTTCAAGTAGCTTAAGTTTGTCTATGCCCTCACAAAATTCTCCAAATGTTAATAATCAGTCTGGTCTACCAGAACCAAGATTTGGATTGGGTGGTGGGAGAGCAGTTACAGCAAGTGCTTTTCCTTCTACAAGAAGCACGGAAACCATCTCTAGACCTGGCAGGCGGTTAAATCCTGGGCAGCCACCAGAGTCAGTTGCATTCAGCTTCACACAGTCCGGTAGTTCTGTGCGTCAGCAACAGCAGTTACCAGCAACTTCTCCTTTTGTTGACCCTCTGGATGCAAGAGCAATACCAGTTACAGGTAGCTCAAGCAGTGGTGATGGTCAGCCAAGTATGATCCACCTTCCTGCATTGACAAGAAATATACACCAATTTGCTTGGAGTGCTTCGTCTAGTTCGAGAGCAAACAGTATGCCTGAAGAGGGATTGTCACCATGGGACGCGCCAAGAATAAACTCAGAGCAGCCAGTCTTTACTACACCTGCAAATGAAACGAGAAATCCAGTGCAGGATCAGTTTTGTTGGAGTTTCACTCGTGGAAACCCTAGTACATCTGGAGATTCTCCCTTTGTTCCTCGAGCAGGATCGAGTTCAGGGATCCATGGTTTGCAGCCGAATCCCACTTGGGTTACTCCCCATAATCAATCAAGAATATCAGAAGTTGCTCCGTGGTCTTTATTTCCTAGTATCGAATCTGAATCTGCTACTCATGGTGCTTCTCTTCCATTACTACCCACAGGGCCTTCTGTTTCCTCGAATGAAGCTGCAGCGCCGTCTGGATCTAGTAGTCGTAGTCATCGCTCTCGACAAAGAAGATCGGGATTATTACTGGAAAGGCAAAATGATCATCTCCATTTGCGTCACTTAGGAAGAAGCTTAGCTGCTGATAATGATGGAAGGAACCGGCTGATTTCCGAGATACGGCAGGTGTTGAGTGCCATGCGAAGAGGGGAGAATTTACGGTTTGAGGATTATATGGTATTCGATCCACTGATCTACCAAGGTATGGCCGAGATGCATGATAGGCATCGGGATATGCGTCTTGATGTTGATAACATGTCATATGAGGAGCTATTGGCACTTGGGGAACGCATAGGAGATGTGAGCACTGGTCTAAGCGAAGAGGTGATCCTGAAAGTAATGAAACAGCACAAACATACATCATCCGCTGCTGGCTCTCACCAGGACATGGAGCCTTGCTGTGTCTGTCAGGAAGAGTATGCAGAAGGAGATGATCTTGGAACACTGGGATGTGGTCATGAATTTCACACTGCCTGCGTCAAGCAATGGCTGATGCTCAAGAATCTCTGCCCAATTTGTAAGACTGTGGCTTTATCGACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006928 GO:0006935 GO:0007275 GO:0007399 GO:0007409 GO:0007411 GO:0007568 GO:0008045 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009653 GO:0009791 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010228 GO:0010259 GO:0010468 GO:0010498 GO:0010556 GO:0010646 GO:0010647 GO:0016043 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021675 GO:0022008 GO:0022414 GO:0023051 GO:0023056 GO:0030030 GO:0030154 GO:0030163 GO:0030182 GO:0030510 GO:0030513 GO:0031175 GO:0031323 GO:0031326 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0032990 GO:0032991 GO:0035107 GO:0035108 GO:0035136 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048468 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048608 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048736 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051603 GO:0060173 GO:0060255 GO:0060384 GO:0061061 GO:0061458 GO:0061564 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0097485 GO:0120036 GO:0120039 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

666

Amino Acids

71.54

Weight (kDa)

5.83

Isoelectric Point (pI)

65.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 615 - 660 6.1e-08 RING-H2 zinc finger domain
zf-RING_2 PF13639 619 - 660 4.4e-11 Ring finger domain
zf-RING_11 PF17123 619 - 646 2.5e-06 RING-like zinc finger
zf-C3HC4_2 PF13923 619 - 659 1.8e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1147, 1573
Acc36I ACCTGC 2 cut(s) 1147, 1573
AccB7I CCANNNNNTGG 3 cut(s) 737, 1663, 1846
AccI GTMKAC 1 cut(s) 721
AccII CGCG 1 cut(s) 1100
AciI CCGC 4 cut(s) 442, 486, 820, 1824
AclWI GGATC 8 cut(s) 988, 1176, 1249, 1249, 1262, 1444, 1637, 1780
AcoI YGGCCR 1 cut(s) 1665
AcsI RAATTY 4 cut(s) 250, 691, 1612, 1919
AcuI CTGAAG 1 cut(s) 1095
AfaI GTAC 1 cut(s) 1207
AfiI CCNNNNNNNGG 7 cut(s) 737, 956, 1079, 1238, 1578, 1663, 1846
AflII CTTAAG 1 cut(s) 667
AflIII ACRYGT 1 cut(s) 1713
AgsI TTSAA 5 cut(s) 188, 264, 560, 611, 660
AjnI CCWGG 6 cut(s) 331, 508, 583, 811, 829, 1839
AjuI GAANNNNNNNTTGG 2 cut(s) 720, 752
Alw21I GWGCWC 2 cut(s) 568, 1766
Alw26I GTCTC 2 cut(s) 77, 452
AlwI GGATC 8 cut(s) 988, 1176, 1249, 1249, 1262, 1444, 1637, 1780
Ama87I CYCGRG 1 cut(s) 1233
AoxI GGCC 3 cut(s) 233, 1397, 1665
ApeKI GCWGC 7 cut(s) 835, 1120, 1267, 1421, 1424, 1538, 1826
ApoI RAATTY 4 cut(s) 250, 691, 1612, 1919
AspLEI GCGC 2 cut(s) 1102, 1429
AspS9I GGNCC 4 cut(s) 8, 233, 506, 1397
AsuHPI GGTGA 7 cut(s) 35, 224, 599, 986, 1080, 1795, 1829
AvaI CYCGRG 1 cut(s) 1233
AvaII GGWCC 2 cut(s) 8, 506
BamHI GGATCC 1 cut(s) 1254
BanII GRGCYC 1 cut(s) 568
BauI CACGAG 1 cut(s) 1191
Bbv12I GWGCWC 2 cut(s) 568, 1766
BbvI GCAGC 7 cut(s) 847, 1132, 1279, 1408, 1436, 1525, 1813
BccI CCATC 6 cut(s) 47, 71, 284, 809, 971, 1544
BceAI ACGGC 2 cut(s) 1414, 1595
BciT130I CCWGG 6 cut(s) 333, 510, 585, 813, 831, 1841
BclI TGATCA 2 cut(s) 241, 1501
BcoDI GTCTC 2 cut(s) 77, 452
BfmI CTRYAG 4 cut(s) 67, 138, 419, 1422
BfoI RGCGCY 1 cut(s) 1430
BfrI CTTAAG 1 cut(s) 667
BfuAI ACCTGC 2 cut(s) 1147, 1573
BisI GCNGC 7 cut(s) 836, 1121, 1268, 1422, 1425, 1539, 1827
BlpI GCTNAGC 1 cut(s) 1534
BlsI GCNGC 7 cut(s) 837, 1122, 1269, 1423, 1426, 1540, 1828
Bme1390I CCNGG 6 cut(s) 333, 510, 585, 813, 831, 1841
Bme18I GGWCC 2 cut(s) 8, 506
BmeT110I CYCGRG 1 cut(s) 1233
BmgT120I GGNCC 4 cut(s) 8, 233, 506, 1397
BmiI GGNNCC 4 cut(s) 234, 1256, 1559, 1851
BmrFI CCNGG 6 cut(s) 333, 510, 585, 813, 831, 1841
BmrI ACTGGG 1 cut(s) 1913
BmsI GCATC 5 cut(s) 643, 925, 1662, 1693, 1941
BmuI ACTGGG 1 cut(s) 1913
BplI GAGNNNNNCTC 2 cut(s) 1174, 1206
BpmI CTGGAG 2 cut(s) 354, 1233
Bpu1102I GCTNAGC 1 cut(s) 1534
BpuEI CTTGAG 3 cut(s) 460, 949, 1940
BsaBI GATNNNNATC 1 cut(s) 1683
BsaJI CCNNGG 6 cut(s) 583, 830, 1091, 1258, 1325, 1657
BsaWI WCCGGW 1 cut(s) 872
BsaXI ACNNNNNCTCC 2 cut(s) 196, 226
Bsc4I CCNNNNNNNGG 7 cut(s) 737, 956, 1079, 1238, 1578, 1663, 1846
Bse118I RCCGGY 1 cut(s) 1560
Bse3DI GCAATG 1 cut(s) 1949
Bse8I GATNNNNATC 1 cut(s) 1683
BseBI CCWGG 6 cut(s) 333, 510, 585, 813, 831, 1841
BseDI CCNNGG 6 cut(s) 583, 830, 1091, 1258, 1325, 1657
BseGI GGATG 6 cut(s) 99, 121, 536, 940, 1820, 1913
BseJI GATNNNNATC 1 cut(s) 1683
BseLI CCNNNNNNNGG 7 cut(s) 737, 956, 1079, 1238, 1578, 1663, 1846
BseMI GCAATG 1 cut(s) 1949
BseMII CTCAG 3 cut(s) 300, 606, 1128
BseRI GAGGAG 2 cut(s) 506, 1739
BseXI GCAGC 7 cut(s) 847, 1132, 1279, 1408, 1436, 1525, 1813
BsgI GTGCAG 1 cut(s) 1184
Bsh1236I CGCG 1 cut(s) 1100
BshFI GGCC 3 cut(s) 235, 1399, 1667
BsiHKAI GWGCWC 2 cut(s) 568, 1766
BsiHKCI CYCGRG 1 cut(s) 1233
BsiSI CCGG 2 cut(s) 873, 1561
BslFI GGGAC 1 cut(s) 1109
BslI CCNNNNNNNGG 7 cut(s) 737, 956, 1079, 1238, 1578, 1663, 1846
BsmAI GTCTC 2 cut(s) 77, 452
BsmFI GGGAC 1 cut(s) 1109
BsmI GAATGC 1 cut(s) 854
BsnI GGCC 3 cut(s) 235, 1399, 1667
BsoBI CYCGRG 1 cut(s) 1233
Bsp1286I GDGCHC 2 cut(s) 568, 1766
Bsp1720I GCTNAGC 1 cut(s) 1534
Bsp19I CCATGG 2 cut(s) 1091, 1258
BspACI CCGC 4 cut(s) 442, 486, 820, 1824
BspANI GGCC 3 cut(s) 235, 1399, 1667
BspCNI CTCAG 3 cut(s) 299, 607, 1127
BspFNI CGCG 1 cut(s) 1100
BspHI TCATGA 1 cut(s) 1915
BspLI GGNNCC 4 cut(s) 234, 1256, 1559, 1851
BspMAI CTGCAG 2 cut(s) 423, 1426
BspMI ACCTGC 2 cut(s) 1147, 1573
BspPI GGATC 8 cut(s) 988, 1176, 1249, 1249, 1262, 1444, 1637, 1780
BspTI CTTAAG 1 cut(s) 667
BsrDI GCAATG 1 cut(s) 1949
BsrFI RCCGGY 1 cut(s) 1560
BssAI RCCGGY 1 cut(s) 1560
BssECI CCNNGG 6 cut(s) 583, 830, 1091, 1258, 1325, 1657
BssSI CACGAG 1 cut(s) 1191
BssT1I CCWWGG 3 cut(s) 1091, 1258, 1657
Bst2BI CACGAG 1 cut(s) 1191
Bst2UI CCWGG 6 cut(s) 333, 510, 585, 813, 831, 1841
Bst4CI ACNGT 4 cut(s) 870, 1067, 1620, 1984
Bst6I CTCTTC 5 cut(s) 1071, 1383, 1597, 1773, 1866
BstAFI CTTAAG 1 cut(s) 667
BstC8I GCNNGC 5 cut(s) 166, 176, 818, 1831, 1933
BstDEI CTNAG 6 cut(s) 286, 615, 1114, 1522, 1534, 1772
BstDSI CCRYGG 3 cut(s) 1091, 1258, 1325
BstENI CCTNNNNNAGG 1 cut(s) 1236
BstF5I GGATG 6 cut(s) 99, 121, 536, 940, 1820, 1913
BstFNI CGCG 1 cut(s) 1100
BstH2I RGCGCY 1 cut(s) 1430
BstHHI GCGC 2 cut(s) 1102, 1429
BstMAI GTCTC 2 cut(s) 77, 452
BstMWI GCNNNNNNNGC 3 cut(s) 764, 1040, 1681
BstNI CCWGG 6 cut(s) 333, 510, 585, 813, 831, 1841
BstNSI RCATGY 2 cut(s) 182, 1717
BstSCI CCNGG 6 cut(s) 331, 508, 583, 811, 829, 1839
BstSFI CTRYAG 4 cut(s) 67, 138, 419, 1422
BstUI CGCG 1 cut(s) 1100
BstV1I GCAGC 7 cut(s) 847, 1132, 1279, 1408, 1436, 1525, 1813
BstX2I RGATCY 2 cut(s) 1254, 1436
BstYI RGATCY 2 cut(s) 1254, 1436
BsuRI GGCC 3 cut(s) 235, 1399, 1667
BtgI CCRYGG 3 cut(s) 1091, 1258, 1325
BtgZI GCGATG 1 cut(s) 1439
BtsCI GGATG 6 cut(s) 99, 121, 536, 940, 1820, 1913
BtsI GCAGTG 3 cut(s) 508, 976, 1926
BtsIMutI CAGTG 9 cut(s) 18, 117, 508, 976, 1167, 1646, 1764, 1901, 1926
BveI ACCTGC 2 cut(s) 1147, 1573
Cac8I GCNNGC 5 cut(s) 166, 176, 818, 1831, 1933
CciI TCATGA 1 cut(s) 1915
CfoI GCGC 2 cut(s) 1102, 1429
Cfr10I RCCGGY 1 cut(s) 1560
Cfr13I GGNCC 4 cut(s) 8, 233, 506, 1397
CseI GACGC 5 cut(s) 875, 1106, 1505, 1685, 1924
Csp6I GTAC 1 cut(s) 1206
CviQI GTAC 1 cut(s) 1206
DdeI CTNAG 6 cut(s) 286, 615, 1114, 1522, 1534, 1772
DraI TTTAAA 1 cut(s) 249
EaeI YGGCCR 1 cut(s) 1665
Eam1104I CTCTTC 5 cut(s) 1071, 1383, 1597, 1773, 1866
EarI CTCTTC 5 cut(s) 1071, 1383, 1597, 1773, 1866
EciI GGCGGA 1 cut(s) 431
Ecl136II GAGCTC 1 cut(s) 566
Eco130I CCWWGG 3 cut(s) 1091, 1258, 1657
Eco24I GRGCYC 1 cut(s) 568
Eco47I GGWCC 2 cut(s) 8, 506
Eco53kI GAGCTC 1 cut(s) 566
Eco57I CTGAAG 1 cut(s) 1095
Eco88I CYCGRG 1 cut(s) 1233
EcoICRI GAGCTC 1 cut(s) 566
EcoNI CCTNNNNNAGG 1 cut(s) 1236
EcoO109I RGGNCCY 2 cut(s) 233, 1397
EcoRII CCWGG 6 cut(s) 331, 508, 583, 811, 829, 1839
EcoT14I CCWWGG 3 cut(s) 1091, 1258, 1657
EcoT22I ATGCAT 1 cut(s) 1677
EcoT38I GRGCYC 1 cut(s) 568
ErhI CCWWGG 3 cut(s) 1091, 1258, 1657
FaqI GGGAC 1 cut(s) 1109
FauNDI CATATG 2 cut(s) 369, 1720
FbaI TGATCA 2 cut(s) 241, 1501
FblI GTMKAC 1 cut(s) 721
Fnu4HI GCNGC 7 cut(s) 836, 1121, 1268, 1422, 1425, 1539, 1827
FokI GGATG 6 cut(s) 86, 128, 523, 947, 1807, 1920
FriOI GRGCYC 1 cut(s) 568
Fsp4HI GCNGC 7 cut(s) 836, 1121, 1268, 1422, 1425, 1539, 1827
GlaI GCGC 2 cut(s) 1101, 1428
GluI GCNGC 7 cut(s) 836, 1121, 1268, 1422, 1425, 1539, 1827
GsuI CTGGAG 2 cut(s) 354, 1233
HaeII RGCGCY 1 cut(s) 1430
HaeIII GGCC 3 cut(s) 235, 1399, 1667
HapII CCGG 2 cut(s) 873, 1561
HgaI GACGC 5 cut(s) 875, 1106, 1505, 1685, 1924
HhaI GCGC 2 cut(s) 1102, 1429
Hin6I GCGC 2 cut(s) 1100, 1427
HinP1I GCGC 2 cut(s) 1100, 1427
HincII GTYRAC 1 cut(s) 925
HindII GTYRAC 1 cut(s) 925
HindIII AAGCTT 1 cut(s) 1531
HpaII CCGG 2 cut(s) 873, 1561
HphI GGTGA 7 cut(s) 35, 224, 599, 986, 1080, 1795, 1829
Hpy166II GTNNAC 3 cut(s) 11, 722, 925
Hpy188I TCNGA 7 cut(s) 82, 241, 289, 1117, 1315, 1354, 1573
Hpy8I GTNNAC 3 cut(s) 11, 722, 925
HpyAV CCTTC 8 cut(s) 246, 302, 554, 789, 1010, 1410, 1548, 1877
HpyCH4III ACNGT 4 cut(s) 870, 1067, 1620, 1984
HpyF10VI GCNNNNNNNGC 3 cut(s) 764, 1040, 1681
HpyF3I CTNAG 6 cut(s) 286, 615, 1114, 1522, 1534, 1772
HspAI GCGC 2 cut(s) 1100, 1427
Ksp22I TGATCA 2 cut(s) 241, 1501
LmnI GCTCC 5 cut(s) 563, 571, 1327, 1726, 1849
Lsp1109I GCAGC 7 cut(s) 847, 1132, 1279, 1408, 1436, 1525, 1813
LweI GCATC 5 cut(s) 643, 925, 1662, 1693, 1941
MaeIII GTNAC 7 cut(s) 327, 760, 900, 952, 1086, 1285, 1517
MboII GAAGA 8 cut(s) 507, 1088, 1370, 1482, 1539, 1614, 1790, 1883
MflI RGATCY 2 cut(s) 1254, 1436
MhlI GDGCHC 2 cut(s) 568, 1766
MluCI AATT 8 cut(s) 43, 76, 250, 691, 1028, 1612, 1919, 1971
MlyI GAGTC 2 cut(s) 347, 854
MmeI TCCRAC 1 cut(s) 1160
Mph1103I ATGCAT 1 cut(s) 1677
MseI TTAA 5 cut(s) 248, 374, 668, 705, 824
MslI CAYNNNNRTG 1 cut(s) 1906
MspA1I CMGCKG 1 cut(s) 1826
MspCI CTTAAG 1 cut(s) 667
MspI CCGG 2 cut(s) 873, 1561
MspR9I CCNGG 6 cut(s) 333, 510, 585, 813, 831, 1841
Mva1269I GAATGC 1 cut(s) 854
MvaI CCWGG 6 cut(s) 333, 510, 585, 813, 831, 1841
MvnI CGCG 1 cut(s) 1100
MwoI GCNNNNNNNGC 3 cut(s) 764, 1040, 1681
NcoI CCATGG 2 cut(s) 1091, 1258
NdeI CATATG 2 cut(s) 369, 1720
NlaIV GGNNCC 4 cut(s) 234, 1256, 1559, 1851
NmeAIII GCCGAG 1 cut(s) 1693
NmuCI GTSAC 2 cut(s) 1086, 1517
NsiI ATGCAT 1 cut(s) 1677
NspI RCATGY 2 cut(s) 182, 1717
PaeR7I CTCGAG 1 cut(s) 1233
PagI TCATGA 1 cut(s) 1915
PaqCI CACCTGC 2 cut(s) 1147, 1573
PciI ACATGT 1 cut(s) 1713
PcsI WCGNNNNNNNCGW 2 cut(s) 1052, 1693
PctI GAATGC 1 cut(s) 854
PfeI GAWTC 8 cut(s) 26, 106, 215, 1217, 1273, 1349, 1355, 1960
PflMI CCANNNNNTGG 3 cut(s) 737, 1663, 1846
PkrI GCNGC 7 cut(s) 837, 1122, 1269, 1423, 1426, 1540, 1828
PleI GAGTC 2 cut(s) 346, 853
PpsI GAGTC 2 cut(s) 346, 853
PscI ACATGT 1 cut(s) 1713
Psp124BI GAGCTC 1 cut(s) 568
Psp6I CCWGG 6 cut(s) 331, 508, 583, 811, 829, 1839
PspGI CCWGG 6 cut(s) 331, 508, 583, 811, 829, 1839
PspN4I GGNNCC 4 cut(s) 234, 1256, 1559, 1851
PspPI GGNCC 4 cut(s) 8, 233, 506, 1397
PspXI VCTCGAGB 1 cut(s) 1233
PstI CTGCAG 2 cut(s) 423, 1426
PsuI RGATCY 2 cut(s) 1254, 1436
RsaI GTAC 1 cut(s) 1207
RsaNI GTAC 1 cut(s) 1206
RseI CAYNNNNRTG 1 cut(s) 1906
SacI GAGCTC 1 cut(s) 568
SaqAI TTAA 5 cut(s) 248, 374, 668, 705, 824
SatI GCNGC 7 cut(s) 836, 1121, 1268, 1422, 1425, 1539, 1827
Sau96I GGNCC 4 cut(s) 8, 233, 506, 1397
SchI GAGTC 2 cut(s) 347, 854
ScrFI CCNGG 6 cut(s) 333, 510, 585, 813, 831, 1841
SduI GDGCHC 2 cut(s) 568, 1766
SfaNI GCATC 5 cut(s) 643, 925, 1662, 1693, 1941
SfcI CTRYAG 4 cut(s) 67, 138, 419, 1422
Sfr274I CTCGAG 1 cut(s) 1233
SinI GGWCC 2 cut(s) 8, 506
SlaI CTCGAG 1 cut(s) 1233
SmiI ATTTAAAT 1 cut(s) 249
SmiMI CAYNNNNRTG 1 cut(s) 1906
SmlI CTYRAG 5 cut(s) 475, 667, 964, 1233, 1955
SmoI CTYRAG 5 cut(s) 475, 667, 964, 1233, 1955
Sse9I AATT 8 cut(s) 43, 76, 250, 691, 1028, 1612, 1919, 1971
SsiI CCGC 4 cut(s) 442, 486, 820, 1824
SstI GAGCTC 1 cut(s) 568
StyD4I CCNGG 6 cut(s) 331, 508, 583, 811, 829, 1839
StyI CCWWGG 3 cut(s) 1091, 1258, 1657
SwaI ATTTAAAT 1 cut(s) 249
TaaI ACNGT 4 cut(s) 870, 1067, 1620, 1984
TasI AATT 8 cut(s) 43, 76, 250, 691, 1028, 1612, 1919, 1971
TatI WGTACW 1 cut(s) 1205
TfiI GAWTC 8 cut(s) 26, 106, 215, 1217, 1273, 1349, 1355, 1960
Tru1I TTAA 5 cut(s) 248, 374, 668, 705, 824
Tru9I TTAA 5 cut(s) 248, 374, 668, 705, 824
TscAI CASTG 9 cut(s) 25, 117, 508, 976, 1167, 1653, 1771, 1908, 1933
TseFI GTSAC 2 cut(s) 1086, 1517
TseI GCWGC 7 cut(s) 835, 1120, 1267, 1421, 1424, 1538, 1826
Tsp45I GTSAC 2 cut(s) 1086, 1517
TspDTI ATGAA 7 cut(s) 18, 453, 525, 1161, 1431, 1814, 1932
TspGWI ACGGA 2 cut(s) 809, 1314
TspRI CASTG 9 cut(s) 25, 117, 508, 976, 1167, 1653, 1771, 1908, 1933
Van91I CCANNNNNTGG 3 cut(s) 737, 1663, 1846
Vha464I CTTAAG 1 cut(s) 667
VpaK11BI GGWCC 2 cut(s) 8, 506
XagI CCTNNNNNAGG 1 cut(s) 1236
XapI RAATTY 4 cut(s) 250, 691, 1612, 1919
XbaI TCTAGA 2 cut(s) 224, 806
XceI RCATGY 2 cut(s) 182, 1717
XcmI CCANNNNNNNNNTGG 2 cut(s) 226, 581
XhoI CTCGAG 1 cut(s) 1233
XmiI GTMKAC 1 cut(s) 721
Zsp2I ATGCAT 1 cut(s) 1677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.