Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000077.1

Orthogroup ID

OG0002668

Physical Location & Seq

Genomic Coordinates Reverse (-)

176228 .. 182288

Gene Structure 6061 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000077.1_g000045.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

atgcaaggtcaagggagtggaattgatactttttcagaaatcactgatgttggtcttggacctgtttccaacagcactggtgaacctagctctagattgaatttgcaaaacacggtcaatgatggtgggacaagaatggaacatggttggtcggctccatatagtgcttgtccagtgattgctcaaagatcggaagatagacgaattgagccaaatatcctttttcctgggagatctcttattggccttggtggcaatcagataccaggtgggccttctttttcagaaggttctagctctagttatatccctcagcatgtaaatttaaatgcaggatatgttgaaaatagtggtaactatgggcatggtatggaagctgatgcagaccctaaattctacaagtcaagtggattagaaggagaacagacatctcgtggcagtgcttcacatgatattgttgggacttcatctggaagctctgattatatggttggggaagatgatggtaatccaggctcttcctttggcaattggggtttatcctgcaagcgaaaggctcttgagggtacgtcagggcagtcttatcccggtggaagttctagctcattttctcaacctgaaaatcgagcattgaatactggtcctgcatgttataatccttctagtggtttaagtttatctacgccccgtaattctcctagtggcattccttcagagcagcagaactcaagaaccaggattggtttgagagttggagcatctgatacctttccttcattaggtgttacgggaaatgcagagagcccactgagacaatatgttaggggtttctgtagtactgggtctcagcaagaatctgcaccatcaaacttatcatcagctggaagatcaacaacagtagctgcaacaaattcgggtggtcctcaaagccagtctcctgctatgcatattaacagttcgtcaggaaacatgcttcctttcccttggaatggtgcttccagttcacgagtgggcagcttatcaggctctgttatgtccggatatagaggtgctgagttaagagaagaagcaagctcacgaagcatttctagaaacaatgtggagcaccccatgtttgtagctgttactgatatgagaaattcagcacaggatccaacaggttggagtttagccccgggaaacttaagcacttctgtaggaggtccttcctctgctagaattggctccagttccagcattcattctttgcctaatccctcatggatccctaacatccctccaacagaaaatcaaaggataactgaatttgcaccttggtctttgtttccatctatagattctcaacccggaggtcataatcattataatccaataccatcaggaccttctgcttcctctcaggattctggaacttcttctggatcaaataatcagggtcgtcaacaatcacatcctaggtcagcattcttgttggacagacaaggtgatgatgttcttaatatgccccattcactacgggcgttagcagctgacattgatgggaggcgccgacttatatctgagattcgtcaagttttgaatgctatgcgcaggggtgagaacttacgagtcgaggattatatgctctttgacccattcatatatcatggcatggccgagatgcatgataggcacagagacatgcgccttgatgttgataacatgtcttacgaggaactgttagcattggaggaacgtataggagatgttagcactggactgagtgaggagaccatattgaaattgatgaaacagagaaaatgtctgtctgttacaacagaattcccagcagatatggaaccctgctgtatctgtcaggagcaatatgctgatggggatgacattggcagactggattgtgggcacgacttccacaccaactgcattaaacagtggctaatgcagaagaatctgtgcccgatttatcgagcagagcgagaaccactaggaagtgaggagaacttgctaaagcgtgactttagcttggctgggttgctagggcgttacccttgcttggctggttctgtaaccgttgtggtcgcggcactaccgtcggctcccgaggagactaggaccgaaccattgacattggctcaatttctccaagacgtgccttatcaggccaaaatgctcattttgggtccaaacaatgagctcattctagttgacgtccatagttgtgaaaattcttctacccacctaggtgggtggtcacctaatgcgttgtcaggagatctagctttctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006928 GO:0006935 GO:0007275 GO:0007399 GO:0007409 GO:0007411 GO:0007568 GO:0008045 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009653 GO:0009791 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010228 GO:0010259 GO:0010468 GO:0010498 GO:0010556 GO:0010646 GO:0010647 GO:0016043 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021675 GO:0022008 GO:0022414 GO:0023051 GO:0023056 GO:0030030 GO:0030154 GO:0030163 GO:0030182 GO:0030510 GO:0030513 GO:0031175 GO:0031323 GO:0031326 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0032990 GO:0032991 GO:0035107 GO:0035108 GO:0035136 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048468 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048608 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048736 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051603 GO:0060173 GO:0060255 GO:0060384 GO:0061061 GO:0061458 GO:0061564 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0097485 GO:0120036 GO:0120039 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

761

Amino Acids

81.44

Weight (kDa)

5.22

Isoelectric Point (pI)

61.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT4G34040
fragaria_vesca	FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790
malus_domestica	MD00G1050100.v1.1 MD05G1083400.v1.1
prunus_persica	Prupe.8G127800_v2.0.a1 Prupe.8G127800_v2.0.a1 Prupe.8G127800_v2.0.a1 Prupe.8G127800_v2.0.a1
pyrus_communis	pycom05g08030 pycom10g08090
rosa_chinensis	RchiOBHm_Chr6g0257951
rosa_laevigata	RLG00000014738
rosa_multiflora	Rmu_sc0000077.1_g000045
rosa_roxburghii	Rroxscaffold_7G00209060
rosa_rugosa	Rorug05G0566000 Rorug05G0566100 Rorug05G0566100 Rorug05G0566200 Rorug05G0566300 Rorug05G0566300 Rorug05G0566300 Rorug05G0566400
rosa_samantha	Rh6AG084000 Rh6BG078600 Rh6CG073200 Rh6DG070200
rosa_wichuraiana	Rw6G007550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	654, 1365
AatII	GACGTC	1 cut(s)	2211
Acc16I	TGCGCA	1 cut(s)	1589
AccB1I	GGYRCC	1 cut(s)	1545
AccII	CGCG	1 cut(s)	2081
AccIII	TCCGGA	1 cut(s)	1037
AciI	CCGC	1 cut(s)	2081
AclWI	GGATC	5 cut(s)	1145, 1158, 1258, 1271, 1429
AcoI	YGGCCR	1 cut(s)	1653
AcsI	RAATTY	8 cut(s)	100, 322, 392, 910, 1138, 1304, 1820, 2224
AcuI	CTGAAG	1 cut(s)	696
AcyI	GRCGYC	2 cut(s)	1546, 2208
AfaI	GTAC	2 cut(s)	568, 838
AfiI	CCNNNNNNNGG	4 cut(s)	665, 779, 989, 2053
AflII	CTTAAG	1 cut(s)	1183
AflIII	ACRYGT	1 cut(s)	1701
AgsI	TTSAA	5 cut(s)	100, 344, 634, 1579, 1780
AjiI	CACGTC	1 cut(s)	2149
AjnI	CCWGG	4 cut(s)	226, 265, 511, 734
AleI	CACNNNNGTG	1 cut(s)	2241
Alw21I	GWGCWC	2 cut(s)	1107, 2196
Alw26I	GTCTC	6 cut(s)	805, 849, 939, 1671, 1763, 2099
AlwI	GGATC	5 cut(s)	1145, 1158, 1258, 1271, 1429
AlwNI	CAGNNNCTG	2 cut(s)	902, 1028
Ama87I	CYCGRG	2 cut(s)	1174, 2099
Aor13HI	TCCGGA	1 cut(s)	1037
AoxI	GGCC	4 cut(s)	244, 272, 1653, 2160
ApeKI	GCWGC	4 cut(s)	718, 902, 1014, 1526
ApoI	RAATTY	8 cut(s)	100, 322, 392, 910, 1138, 1304, 1820, 2224
Asp700I	GAANNNNTTC	2 cut(s)	1084, 1414
AspA2I	CCTAGG	2 cut(s)	1454, 2239
AspLEI	GCGC	3 cut(s)	1548, 1590, 1686
AspS9I	GGNCC	8 cut(s)	59, 272, 641, 920, 1202, 1382, 2112, 2180
AsuC2I	CCSGG	4 cut(s)	588, 1175, 1176, 1347
AsuHPI	GGTGA	4 cut(s)	92, 1496, 1607, 2244
AvaI	CYCGRG	2 cut(s)	1174, 2099
AvaII	GGWCC	7 cut(s)	59, 641, 920, 1202, 1382, 2112, 2180
AvrII	CCTAGG	2 cut(s)	1454, 2239
BaeGI	GKGCMC	2 cut(s)	1905, 1958
BamHI	GGATCC	2 cut(s)	1150, 1263
BanI	GGYRCC	1 cut(s)	1545
BanII	GRGCYC	2 cut(s)	806, 2196
BauI	CACGAG	2 cut(s)	432, 1005
Bbv12I	GWGCWC	2 cut(s)	1107, 2196
BbvCI	CCTCAGC	1 cut(s)	312
BbvI	GCAGC	4 cut(s)	730, 889, 1026, 1538
BccI	CCATC	7 cut(s)	116, 497, 871, 1336, 1384, 1532, 1865
BcgI	CGANNNNNNTGC	4 cut(s)	894, 928, 2073, 2107
BciT130I	CCWGG	4 cut(s)	228, 267, 513, 736
BcnI	CCSGG	4 cut(s)	588, 1175, 1176, 1347
BcoDI	GTCTC	6 cut(s)	805, 849, 939, 1671, 1763, 2099
BfmI	CTRYAG	3 cut(s)	832, 1194, 1332
BfoI	RGCGCY	1 cut(s)	1549
BfrI	CTTAAG	1 cut(s)	1183
BglI	GCCNNNNNGGC	1 cut(s)	252
BglII	AGATCT	2 cut(s)	233, 2272
BisI	GCNGC	5 cut(s)	719, 903, 1015, 1527, 2082
BlnI	CCTAGG	2 cut(s)	1454, 2239
BlsI	GCNGC	5 cut(s)	720, 904, 1016, 1528, 2083
BmcAI	AGTACT	1 cut(s)	838
Bme1390I	CCNGG	8 cut(s)	228, 267, 513, 588, 736, 1175, 1176, 1347
Bme18I	GGWCC	7 cut(s)	59, 641, 920, 1202, 1382, 2112, 2180
BmeT110I	CYCGRG	2 cut(s)	1174, 2099
BmgBI	CACGTC	1 cut(s)	2149
BmgT120I	GGNCC	8 cut(s)	59, 272, 641, 920, 1202, 1382, 2112, 2180
BmiI	GGNNCC	8 cut(s)	156, 1152, 1225, 1265, 1547, 1839, 2097, 2181
BmrFI	CCNGG	8 cut(s)	228, 267, 513, 588, 736, 1175, 1176, 1347
BmrI	ACTGGG	1 cut(s)	849
BmsI	GCATC	3 cut(s)	370, 767, 1650
BmuI	ACTGGG	1 cut(s)	849
BpmI	CTGGAG	1 cut(s)	1210
Bpu10I	CCTNAGC	1 cut(s)	312
BpuEI	CTTGAG	2 cut(s)	581, 712
BpuMI	CCSGG	4 cut(s)	588, 1175, 1176, 1347
BsaBI	GATNNNNATC	1 cut(s)	507
BsaHI	GRCGYC	2 cut(s)	1546, 2208
BsaI	GGTCTC	2 cut(s)	849, 1763
BsaJI	CCNNGG	9 cut(s)	227, 247, 983, 1173, 1174, 1313, 1454, 2100, 2239
BsaWI	WCCGGW	1 cut(s)	1037
Bsc4I	CCNNNNNNNGG	4 cut(s)	665, 779, 989, 2053
Bse1I	ACTGG	9 cut(s)	82, 173, 643, 844, 931, 999, 1227, 1759, 1896
Bse8I	GATNNNNATC	1 cut(s)	507
BseAI	TCCGGA	1 cut(s)	1037
BseBI	CCWGG	4 cut(s)	228, 267, 513, 736
BseDI	CCNNGG	9 cut(s)	227, 247, 983, 1173, 1174, 1313, 1454, 2100, 2239
BseGI	GGATG	3 cut(s)	1272, 1450, 1882
BseJI	GATNNNNATC	1 cut(s)	507
BseLI	CCNNNNNNNGG	4 cut(s)	665, 779, 989, 2053
BseMII	CTCAG	7 cut(s)	326, 800, 860, 1044, 1412, 1551, 1751
BseNI	ACTGG	9 cut(s)	82, 173, 643, 844, 931, 999, 1227, 1759, 1896
BseRI	GAGGAG	3 cut(s)	1781, 2009, 2117
BseSI	GKGCMC	2 cut(s)	1905, 1958
BseXI	GCAGC	4 cut(s)	730, 889, 1026, 1538
BseYI	CCCAGC	2 cut(s)	1825, 2027
BsgI	GTGCAG	1 cut(s)	843
Bsh1236I	CGCG	1 cut(s)	2081
BshFI	GGCC	4 cut(s)	246, 274, 1655, 2162
BshNI	GGYRCC	1 cut(s)	1545
BsiHKAI	GWGCWC	2 cut(s)	1107, 2196
BsiHKCI	CYCGRG	2 cut(s)	1174, 2099
BsiSI	CCGG	4 cut(s)	588, 1038, 1175, 1347
BslFI	GGGAC	2 cut(s)	142, 475
BslI	CCNNNNNNNGG	4 cut(s)	665, 779, 989, 2053
BsmAI	GTCTC	6 cut(s)	805, 849, 939, 1671, 1763, 2099
BsmFI	GGGAC	2 cut(s)	142, 475
BsmI	GAATGC	4 cut(s)	705, 1236, 1463, 1585
BsnI	GGCC	4 cut(s)	246, 274, 1655, 2162
Bso31I	GGTCTC	2 cut(s)	849, 1763
BsoBI	CYCGRG	2 cut(s)	1174, 2099
Bsp1286I	GDGCHC	5 cut(s)	806, 1107, 1905, 1958, 2196
Bsp13I	TCCGGA	1 cut(s)	1037
Bsp143I	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
BspACI	CCGC	1 cut(s)	2081
BspANI	GGCC	4 cut(s)	246, 274, 1655, 2162
BspCNI	CTCAG	7 cut(s)	325, 801, 859, 1045, 1411, 1552, 1752
BspEI	TCCGGA	1 cut(s)	1037
BspFNI	CGCG	1 cut(s)	2081
BspLI	GGNNCC	8 cut(s)	156, 1152, 1225, 1265, 1547, 1839, 2097, 2181
BspPI	GGATC	5 cut(s)	1145, 1158, 1258, 1271, 1429
BspQI	GCTCTTC	1 cut(s)	523
BspT107I	GGYRCC	1 cut(s)	1545
BspTI	CTTAAG	1 cut(s)	1183
BspTNI	GGTCTC	2 cut(s)	849, 1763
BsrI	ACTGG	9 cut(s)	82, 173, 643, 844, 931, 999, 1227, 1759, 1896
BssECI	CCNNGG	9 cut(s)	227, 247, 983, 1173, 1174, 1313, 1454, 2100, 2239
BssMI	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
BssNI	GRCGYC	2 cut(s)	1546, 2208
BssSI	CACGAG	2 cut(s)	432, 1005
BssT1I	CCWWGG	5 cut(s)	247, 983, 1313, 1454, 2239
Bst2BI	CACGAG	2 cut(s)	432, 1005
Bst2UI	CCWGG	4 cut(s)	228, 267, 513, 736
Bst4CI	ACNGT	7 cut(s)	115, 898, 956, 1719, 1932, 2071, 2091
Bst6I	CTCTTC	1 cut(s)	523
BstACI	GRCGYC	2 cut(s)	1546, 2208
BstAFI	CTTAAG	1 cut(s)	1183
BstC8I	GCNNGC	2 cut(s)	548, 1072
BstDEI	CTNAG	7 cut(s)	312, 809, 846, 1053, 1398, 1560, 1760
BstEII	GGTNACC	1 cut(s)	2250
BstENI	CCTNNNNNAGG	1 cut(s)	777
BstF5I	GGATG	3 cut(s)	1272, 1450, 1882
BstFNI	CGCG	1 cut(s)	2081
BstH2I	RGCGCY	1 cut(s)	1549
BstHHI	GCGC	3 cut(s)	1548, 1590, 1686
BstKTI	GATC	7 cut(s)	191, 236, 890, 1153, 1266, 1424, 2275
BstMAI	GTCTC	6 cut(s)	805, 849, 939, 1671, 1763, 2099
BstMBI	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
BstMWI	GCNNNNNNNGC	5 cut(s)	252, 1023, 1080, 1526, 1669
BstNI	CCWGG	4 cut(s)	228, 267, 513, 736
BstNSI	RCATGY	5 cut(s)	320, 651, 973, 1684, 1705
BstPI	GGTNACC	1 cut(s)	2250
BstSCI	CCNGG	8 cut(s)	226, 265, 511, 586, 734, 1173, 1174, 1345
BstSFI	CTRYAG	3 cut(s)	832, 1194, 1332
BstSLI	GKGCMC	2 cut(s)	1905, 1958
BstUI	CGCG	1 cut(s)	2081
BstV1I	GCAGC	4 cut(s)	730, 889, 1026, 1538
BstX2I	RGATCY	4 cut(s)	233, 1150, 1263, 2272
BstXI	CCANNNNNNTGG	2 cut(s)	1161, 2243
BstYI	RGATCY	4 cut(s)	233, 1150, 1263, 2272
BsuRI	GGCC	4 cut(s)	246, 274, 1655, 2162
BtrI	CACGTC	1 cut(s)	2149
BtsCI	GGATG	3 cut(s)	1272, 1450, 1882
BtsI	GCAGTG	1 cut(s)	445
BtsIMutI	CAGTG	7 cut(s)	42, 75, 180, 445, 806, 1752, 1937
Cac8I	GCNNGC	2 cut(s)	548, 1072
CaiI	CAGNNNCTG	2 cut(s)	902, 1028
CfoI	GCGC	3 cut(s)	1548, 1590, 1686
Cfr13I	GGNCC	8 cut(s)	59, 272, 641, 920, 1202, 1382, 2112, 2180
Cfr9I	CCCGGG	1 cut(s)	1174
CsiI	ACCWGGT	1 cut(s)	265
Csp6I	GTAC	2 cut(s)	567, 837
CspCI	CAANNNNNGTGG	4 cut(s)	106, 141, 388, 423
CviQI	GTAC	2 cut(s)	567, 837
DdeI	CTNAG	7 cut(s)	312, 809, 846, 1053, 1398, 1560, 1760
DinI	GGCGCC	1 cut(s)	1547
DpnI	GATC	7 cut(s)	190, 235, 889, 1152, 1265, 1423, 2274
DpnII	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
DraI	TTTAAA	1 cut(s)	327
EaeI	YGGCCR	1 cut(s)	1653
Eam1104I	CTCTTC	1 cut(s)	523
EarI	CTCTTC	1 cut(s)	523
Ecl136II	GAGCTC	1 cut(s)	2194
Eco130I	CCWWGG	5 cut(s)	247, 983, 1313, 1454, 2239
Eco24I	GRGCYC	2 cut(s)	806, 2196
Eco31I	GGTCTC	2 cut(s)	849, 1763
Eco47I	GGWCC	7 cut(s)	59, 641, 920, 1202, 1382, 2112, 2180
Eco53kI	GAGCTC	1 cut(s)	2194
Eco57I	CTGAAG	1 cut(s)	696
Eco88I	CYCGRG	2 cut(s)	1174, 2099
Eco91I	GGTNACC	1 cut(s)	2250
EcoICRI	GAGCTC	1 cut(s)	2194
EcoNI	CCTNNNNNAGG	1 cut(s)	777
EcoO109I	RGGNCCY	2 cut(s)	1202, 1382
EcoO65I	GGTNACC	1 cut(s)	2250
EcoRI	GAATTC	1 cut(s)	1820
EcoRII	CCWGG	4 cut(s)	226, 265, 511, 734
EcoT14I	CCWWGG	5 cut(s)	247, 983, 1313, 1454, 2239
EcoT22I	ATGCAT	2 cut(s)	948, 1665
EcoT38I	GRGCYC	2 cut(s)	806, 2196
EgeI	GGCGCC	1 cut(s)	1547
EheI	GGCGCC	1 cut(s)	1547
ErhI	CCWWGG	5 cut(s)	247, 983, 1313, 1454, 2239
FalI	AAGNNNNNCTT	2 cut(s)	2000, 2032
FaqI	GGGAC	2 cut(s)	142, 475
Fnu4HI	GCNGC	5 cut(s)	719, 903, 1015, 1527, 2082
FokI	GGATG	3 cut(s)	1259, 1437, 1889
FriOI	GRGCYC	2 cut(s)	806, 2196
Fsp4HI	GCNGC	5 cut(s)	719, 903, 1015, 1527, 2082
FspI	TGCGCA	1 cut(s)	1589
GlaI	GCGC	3 cut(s)	1547, 1589, 1685
GluI	GCNGC	5 cut(s)	719, 903, 1015, 1527, 2082
GsaI	CCCAGC	2 cut(s)	1829, 2031
GsuI	CTGGAG	1 cut(s)	1210
HaeII	RGCGCY	1 cut(s)	1549
HaeIII	GGCC	4 cut(s)	246, 274, 1655, 2162
HapII	CCGG	4 cut(s)	588, 1038, 1175, 1347
HhaI	GCGC	3 cut(s)	1548, 1590, 1686
Hin1I	GRCGYC	2 cut(s)	1546, 2208
Hin6I	GCGC	3 cut(s)	1546, 1588, 1684
HinP1I	GCGC	3 cut(s)	1546, 1588, 1684
HincII	GTYRAC	2 cut(s)	1442, 2206
HindII	GTYRAC	2 cut(s)	1442, 2206
HinfI	GANTC	6 cut(s)	854, 1337, 1403, 1564, 1608, 1948
HpaII	CCGG	4 cut(s)	588, 1038, 1175, 1347
HphI	GGTGA	4 cut(s)	92, 1496, 1607, 2244
Hpy166II	GTNNAC	4 cut(s)	83, 1004, 1442, 2206
Hpy188I	TCNGA	9 cut(s)	37, 193, 261, 286, 481, 715, 763, 1561, 2285
Hpy8I	GTNNAC	4 cut(s)	83, 1004, 1442, 2206
Hpy99I	CGWCG	1 cut(s)	2095
HpyAV	CCTTC	8 cut(s)	281, 285, 410, 669, 720, 783, 1215, 1395
HpyCH4III	ACNGT	7 cut(s)	115, 898, 956, 1719, 1932, 2071, 2091
HpyCH4IV	ACGT	4 cut(s)	569, 1735, 2148, 2208
HpyF10VI	GCNNNNNNNGC	5 cut(s)	252, 1023, 1080, 1526, 1669
HpyF3I	CTNAG	7 cut(s)	312, 809, 846, 1053, 1398, 1560, 1760
HpySE526I	ACGT	4 cut(s)	569, 1735, 2148, 2208
Hsp92I	GRCGYC	2 cut(s)	1546, 2208
HspAI	GCGC	3 cut(s)	1546, 1588, 1684
KasI	GGCGCC	1 cut(s)	1545
Kpn2I	TCCGGA	1 cut(s)	1037
Kzo9I	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
LguI	GCTCTTC	1 cut(s)	523
LmnI	GCTCC	6 cut(s)	160, 755, 1102, 1229, 1858, 2101
Lsp1109I	GCAGC	4 cut(s)	730, 889, 1026, 1538
LweI	GCATC	3 cut(s)	370, 767, 1650
MabI	ACCWGGT	1 cut(s)	265
MaeII	ACGT	4 cut(s)	569, 1735, 2148, 2208
MaeIII	GTNAC	8 cut(s)	353, 784, 1123, 1810, 2012, 2042, 2065, 2250
MalI	GATC	7 cut(s)	190, 235, 889, 1152, 1265, 1423, 2274
MboI	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
MboII	GAAGA	8 cut(s)	206, 509, 510, 897, 1076, 1407, 1957, 2220
MfeI	CAATTG	1 cut(s)	529
MflI	RGATCY	4 cut(s)	233, 1150, 1263, 2272
MhlI	GDGCHC	5 cut(s)	806, 1107, 1905, 1958, 2196
Mly113I	GGCGCC	1 cut(s)	1546
MlyI	GAGTC	1 cut(s)	1617
MmeI	TCCRAC	6 cut(s)	93, 733, 1142, 1178, 1304, 1452
Mph1103I	ATGCAT	2 cut(s)	948, 1665
MroI	TCCGGA	1 cut(s)	1037
MroXI	GAANNNNTTC	2 cut(s)	1084, 1414
MseI	TTAA	7 cut(s)	326, 671, 951, 1058, 1184, 1497, 1926
MslI	CAYNNNNRTG	2 cut(s)	2217, 2241
MspA1I	CMGCKG	2 cut(s)	881, 1529
MspCI	CTTAAG	1 cut(s)	1183
MspI	CCGG	4 cut(s)	588, 1038, 1175, 1347
MspR9I	CCNGG	8 cut(s)	228, 267, 513, 588, 736, 1175, 1176, 1347
MunI	CAATTG	1 cut(s)	529
Mva1269I	GAATGC	4 cut(s)	705, 1236, 1463, 1585
MvaI	CCWGG	4 cut(s)	228, 267, 513, 736
MvnI	CGCG	1 cut(s)	2081
MwoI	GCNNNNNNNGC	5 cut(s)	252, 1023, 1080, 1526, 1669
NarI	GGCGCC	1 cut(s)	1546
NciI	CCSGG	4 cut(s)	588, 1175, 1176, 1347
NdeII	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
NlaIV	GGNNCC	8 cut(s)	156, 1152, 1225, 1265, 1547, 1839, 2097, 2181
NmeAIII	GCCGAG	1 cut(s)	1681
NmuCI	GTSAC	2 cut(s)	2012, 2250
NsbI	TGCGCA	1 cut(s)	1589
NsiI	ATGCAT	2 cut(s)	948, 1665
NspI	RCATGY	5 cut(s)	320, 651, 973, 1684, 1705
OliI	CACNNNNGTG	1 cut(s)	2241
PciI	ACATGT	1 cut(s)	1701
PciSI	GCTCTTC	1 cut(s)	523
PcsI	WCGNNNNNNNCGW	1 cut(s)	1972
PctI	GAATGC	4 cut(s)	705, 1236, 1463, 1585
PdmI	GAANNNNTTC	2 cut(s)	1084, 1414
PfeI	GAWTC	5 cut(s)	854, 1337, 1403, 1564, 1948
PkrI	GCNGC	5 cut(s)	720, 904, 1016, 1528, 2083
PleI	GAGTC	1 cut(s)	1616
PluTI	GGCGCC	1 cut(s)	1549
PpsI	GAGTC	1 cut(s)	1616
PpuMI	RGGWCCY	2 cut(s)	1202, 1382
PscI	ACATGT	1 cut(s)	1701
PsiI	TTATAA	2 cut(s)	654, 1365
Psp124BI	GAGCTC	1 cut(s)	2196
Psp5II	RGGWCCY	2 cut(s)	1202, 1382
Psp6I	CCWGG	4 cut(s)	226, 265, 511, 734
PspEI	GGTNACC	1 cut(s)	2250
PspFI	CCCAGC	2 cut(s)	1825, 2027
PspGI	CCWGG	4 cut(s)	226, 265, 511, 734
PspN4I	GGNNCC	8 cut(s)	156, 1152, 1225, 1265, 1547, 1839, 2097, 2181
PspPI	GGNCC	8 cut(s)	59, 272, 641, 920, 1202, 1382, 2112, 2180
PspPPI	RGGWCCY	2 cut(s)	1202, 1382
PstNI	CAGNNNCTG	2 cut(s)	902, 1028
PsuI	RGATCY	4 cut(s)	233, 1150, 1263, 2272
PvuII	CAGCTG	2 cut(s)	881, 1529
RsaI	GTAC	2 cut(s)	568, 838
RsaNI	GTAC	2 cut(s)	567, 837
RseI	CAYNNNNRTG	2 cut(s)	2217, 2241
SacI	GAGCTC	1 cut(s)	2196
SapI	GCTCTTC	1 cut(s)	523
SaqAI	TTAA	7 cut(s)	326, 671, 951, 1058, 1184, 1497, 1926
SatI	GCNGC	5 cut(s)	719, 903, 1015, 1527, 2082
Sau3AI	GATC	7 cut(s)	188, 233, 887, 1150, 1263, 1421, 2272
Sau96I	GGNCC	8 cut(s)	59, 272, 641, 920, 1202, 1382, 2112, 2180
ScaI	AGTACT	1 cut(s)	838
SchI	GAGTC	1 cut(s)	1617
ScrFI	CCNGG	8 cut(s)	228, 267, 513, 588, 736, 1175, 1176, 1347
SduI	GDGCHC	5 cut(s)	806, 1107, 1905, 1958, 2196
SexAI	ACCWGGT	1 cut(s)	265
SfaNI	GCATC	3 cut(s)	370, 767, 1650
SfcI	CTRYAG	3 cut(s)	832, 1194, 1332
SfoI	GGCGCC	1 cut(s)	1547
SinI	GGWCC	7 cut(s)	59, 641, 920, 1202, 1382, 2112, 2180
SmaI	CCCGGG	1 cut(s)	1176
SmiI	ATTTAAAT	1 cut(s)	327
SmiMI	CAYNNNNRTG	2 cut(s)	2217, 2241
SmlI	CTYRAG	3 cut(s)	560, 727, 1183
SmoI	CTYRAG	3 cut(s)	560, 727, 1183
SsiI	CCGC	1 cut(s)	2081
SspDI	GGCGCC	1 cut(s)	1545
SstI	GAGCTC	1 cut(s)	2196
StyD4I	CCNGG	8 cut(s)	226, 265, 511, 586, 734, 1173, 1174, 1345
StyI	CCWWGG	5 cut(s)	247, 983, 1313, 1454, 2239
SwaI	ATTTAAAT	1 cut(s)	327
TaaI	ACNGT	7 cut(s)	115, 898, 956, 1719, 1932, 2071, 2091
TaiI	ACGT	4 cut(s)	572, 1738, 2151, 2211
TaqI	TCGA	3 cut(s)	625, 1611, 1966
TaqII	GACCGA	1 cut(s)	2129
TatI	WGTACW	1 cut(s)	836
TauI	GCSGC	1 cut(s)	2084
TfiI	GAWTC	5 cut(s)	854, 1337, 1403, 1564, 1948
Tru1I	TTAA	7 cut(s)	326, 671, 951, 1058, 1184, 1497, 1926
Tru9I	TTAA	7 cut(s)	326, 671, 951, 1058, 1184, 1497, 1926
TscAI	CASTG	7 cut(s)	49, 82, 180, 445, 813, 1759, 1937
TseFI	GTSAC	2 cut(s)	2012, 2250
TseI	GCWGC	4 cut(s)	718, 902, 1014, 1526
Tsp45I	GTSAC	2 cut(s)	2012, 2250
TspDTI	ATGAA	5 cut(s)	456, 765, 1229, 1627, 1802
TspMI	CCCGGG	1 cut(s)	1174
TspRI	CASTG	7 cut(s)	49, 82, 180, 445, 813, 1759, 1937
Vha464I	CTTAAG	1 cut(s)	1183
VpaK11BI	GGWCC	7 cut(s)	59, 641, 920, 1202, 1382, 2112, 2180
XagI	CCTNNNNNAGG	1 cut(s)	777
XapI	RAATTY	8 cut(s)	100, 322, 392, 910, 1138, 1304, 1820, 2224
XbaI	TCTAGA	2 cut(s)	92, 1088
XceI	RCATGY	5 cut(s)	320, 651, 973, 1684, 1705
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1006
XmaI	CCCGGG	1 cut(s)	1174
XmaJI	CCTAGG	2 cut(s)	1454, 2239
XmnI	GAANNNNTTC	2 cut(s)	1084, 1414
ZraI	GACGTC	1 cut(s)	2209
ZrmI	AGTACT	1 cut(s)	838
Zsp2I	ATGCAT	2 cut(s)	948, 1665

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.