RLG00000014738

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0002668
Physical Location & Seq
Reverse (-)
57001559 .. 57005259
3701 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014738

Sequence Viewer

Length: 1992 bp
ATGCAAGGTCAAGGGAGTGGAATTGATACTTTTTCAGAAATCACTGATGTTGGTCTTGGACCTGTTTCCAACAGCACTGGTGAACCTAGCTCTAGATTGAATTTGCAAAACACGGTCAATGATGGTGGGACCAGAATGGAACATGGTTGGTCTGCTCCATATAGTGCTTGTCCTCTGATTGCTCAAAGATCAGAAGATAGACGAATTGAGCCAAATATCCTTTTTCCTGGGAGATCTCTTATTGGCCTTGGTGGCAATCAGATACCAGGTGGGCCTTCTTTTTCAGAAGGTTCTAGCTCTAGTTATATCCCTCAGCATGTAAATTTAAATGCAGGATATGTTGAAAGTAGTGGTAACTATGGGCATGGTATGGAAGCTGATGCAGACCCTAAATTCTACAAGTCAAGTGGATTAGAAGCAGAACAGACATCTCCCGGCAGTGCTTCACATGATATTGTTCAGACTTCATCTGGAAGCTCTGATTATATGGTTGGGGAAGACGATGGTAATCCAGGCTCTTCTTTTGGCAATTGGGGTTTATCCTGCAAGCGAAAGGCTCTTGAGGGTACGTCAGGGCAGTCTTATCCCGGTGGAAGTTCTAGCTCATTTCCTCAACCTGAAAATCGAGCATGGAATGCTGGTCCTGCATGTTATAATCCTTCTAGTAGTTTAAGTTTATCTACGCCCCGTAATTCTCCTAGTGGCATTCCTTCAGAGCAGCAGAACTCAAGAACCAGGATTGGTTTGAGAGTTGGAGCATCTGATACCTTTCCTTCATTAGGTGTTACAGGAAATGCAGAGAGCCCACTGAGACAATACGTTAGGGGTTTCTGTAGCACTGGGTCTCAGCAAGAATCTGCACCATCAAACTTATCATCAGCTGGAAGATCAACAACAGTAGCTGCAACAAATTCGGGTGGTCCTCAAAGCCAGTCTCCTGCTATGCATATCAACAGTTCGTCAGGAAACATGCTTCCTTTCCCTTGGAATGGTGCTTCCAGTTCACGAGTGGGCAGCTTATCAGGCTCTGTTATGTCCGGATATAGAGGTGCAGAGTTAAGAGAAGAAGCAAGCTCACGAAGCATTTCTAGAAGCAATGTGGAGCACCCCATGTTTGTAGCTGTTACTGATATGAGAAATTCAGCACAGGATCCAACAGGTTGGAGTTTAGCCCCAGGAAACTTAAGCAGTTCTGTAGGTGGTCCTTCCTCTGCTAGAATTGGCTCCAGTTCTGGCGTTCATTCTTTGTCTAATCCCTCATGGATCCCTCTCAACAGCCCTCCAACGGAAAATCAAAGGATTACTGAATTTGCACCTTGGTCTTTGTTTCCATCTATAGATTCTCAACCCGGAGGTCATAATCATTATAATCCAATACCATCAGGACCTTCTGCTTCCTCTCCGGATTCTGGAACTTCTTCTGGATCAAATAATCAGGGTCGTCAACAACCACATCCTAGGTCAGCATTCTTGTTGGATAGACAAGGTGATGATGTTCTTAATATGCCCCATTCACTACGGGCGTTAGCAGCTGACATTGATGGGAGGCGCCGACTTATATCTGAGATTCGTCAAGTTTTGAATGCTATGCGCAGGGGTGAGAACTTACGAGTCGAGGATTATATGCTCTTTGACCCATTCATATATCATGGCATGGCCGAGATGCAGGATAGGCACAGAGACATGCGCCTTGATGTTGATAACATGTCTTACGAGGAACTATTAGCATTGGAGGAACGTATAGGAGATGTTAGCACTGGATTGAGTGAGGAGACCATATTGAAATTGATGAAACAGAGAAAATGTCTGTCTGTTACAACAGAATTCCCAGCAGATATGGAACCCTGCTGTATCTGTCAGGAGCAATATGCTGATGGGGATGATATTGGCAGACTGGATTGTGGGCATGACTTCCACACCAACTGCATTAAACAGTGGCTAATGCAGAAGAATCTGTGCCCGATTTGTAAAACGCCAGCCTTGCTGACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006928 GO:0006935 GO:0007275 GO:0007399 GO:0007409 GO:0007411 GO:0007568 GO:0008045 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009653 GO:0009791 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010228 GO:0010259 GO:0010468 GO:0010498 GO:0010556 GO:0010646 GO:0010647 GO:0016043 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021675 GO:0022008 GO:0022414 GO:0023051 GO:0023056 GO:0030030 GO:0030154 GO:0030163 GO:0030182 GO:0030510 GO:0030513 GO:0031175 GO:0031323 GO:0031326 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0032990 GO:0032991 GO:0035107 GO:0035108 GO:0035136 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048468 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048608 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048736 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051603 GO:0060173 GO:0060255 GO:0060384 GO:0061061 GO:0061458 GO:0061564 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0097485 GO:0120036 GO:0120039 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

664

Amino Acids

70.79

Weight (kDa)

5.33

Isoelectric Point (pI)

63.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 613 - 657 5.8e-09 RING-H2 zinc finger domain
zf-RING_2 PF13639 616 - 657 3.5e-12 Ring finger domain
zf-C3HC4_2 PF13923 616 - 656 1.1e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 616 - 656 2.9e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 616 - 643 7.5e-06 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 654, 1368
Acc16I TGCGCA 1 cut(s) 1592
AccB1I GGYRCC 1 cut(s) 1548
AccIII TCCGGA 2 cut(s) 1037, 1402
AclWI GGATC 5 cut(s) 1145, 1158, 1258, 1271, 1432
AcoI YGGCCR 1 cut(s) 1656
AcsI RAATTY 7 cut(s) 100, 322, 392, 910, 1138, 1307, 1823
AcuI CTGAAG 1 cut(s) 696
AcyI GRCGYC 1 cut(s) 1549
AfaI GTAC 1 cut(s) 568
AfiI CCNNNNNNNGG 4 cut(s) 779, 989, 1285, 1409
AflII CTTAAG 1 cut(s) 1183
AflIII ACRYGT 1 cut(s) 1704
AgsI TTSAA 4 cut(s) 100, 344, 1582, 1783
AjnI CCWGG 5 cut(s) 226, 265, 511, 734, 1174
Alw21I GWGCWC 1 cut(s) 1107
Alw26I GTCTC 5 cut(s) 805, 849, 939, 1674, 1766
AlwI GGATC 5 cut(s) 1145, 1158, 1258, 1271, 1432
AlwNI CAGNNNCTG 2 cut(s) 902, 1028
Aor13HI TCCGGA 2 cut(s) 1037, 1402
AoxI GGCC 3 cut(s) 244, 272, 1656
ApeKI GCWGC 4 cut(s) 718, 902, 1014, 1529
ApoI RAATTY 7 cut(s) 100, 322, 392, 910, 1138, 1307, 1823
Asp700I GAANNNNTTC 2 cut(s) 1084, 1417
AspA2I CCTAGG 1 cut(s) 1457
AspLEI GCGC 3 cut(s) 1551, 1593, 1689
AspS9I GGNCC 7 cut(s) 59, 129, 272, 641, 920, 1202, 1385
AsuC2I CCSGG 3 cut(s) 435, 588, 1350
AsuHPI GGTGA 3 cut(s) 92, 1499, 1610
AvaII GGWCC 6 cut(s) 59, 129, 641, 920, 1202, 1385
AvrII CCTAGG 1 cut(s) 1457
BaeGI GKGCMC 1 cut(s) 1961
BamHI GGATCC 2 cut(s) 1150, 1263
BanI GGYRCC 1 cut(s) 1548
BanII GRGCYC 1 cut(s) 806
BauI CACGAG 1 cut(s) 1005
BbsI GAAGAC 1 cut(s) 504
Bbv12I GWGCWC 1 cut(s) 1107
BbvCI CCTCAGC 1 cut(s) 312
BbvI GCAGC 4 cut(s) 730, 889, 1026, 1541
BccI CCATC 7 cut(s) 116, 497, 871, 1339, 1387, 1535, 1868
BcgI CGANNNNNNTGC 2 cut(s) 894, 928
BciT130I CCWGG 5 cut(s) 228, 267, 513, 736, 1176
BcnI CCSGG 3 cut(s) 435, 588, 1350
BcoDI GTCTC 5 cut(s) 805, 849, 939, 1674, 1766
BfmI CTRYAG 3 cut(s) 832, 1194, 1335
BfoI RGCGCY 1 cut(s) 1552
BfrI CTTAAG 1 cut(s) 1183
BglI GCCNNNNNGGC 1 cut(s) 252
BglII AGATCT 1 cut(s) 233
BisI GCNGC 4 cut(s) 719, 903, 1015, 1530
BlnI CCTAGG 1 cut(s) 1457
BlsI GCNGC 4 cut(s) 720, 904, 1016, 1531
Bme1390I CCNGG 8 cut(s) 228, 267, 435, 513, 588, 736, 1176, 1350
Bme18I GGWCC 6 cut(s) 59, 129, 641, 920, 1202, 1385
BmgT120I GGNCC 7 cut(s) 59, 129, 272, 641, 920, 1202, 1385
BmiI GGNNCC 6 cut(s) 130, 1152, 1225, 1265, 1550, 1842
BmrFI CCNGG 8 cut(s) 228, 267, 435, 513, 588, 736, 1176, 1350
BmrI ACTGGG 1 cut(s) 849
BmsI GCATC 3 cut(s) 370, 767, 1653
BmuI ACTGGG 1 cut(s) 849
BpiI GAAGAC 1 cut(s) 504
BpmI CTGGAG 1 cut(s) 1210
Bpu10I CCTNAGC 1 cut(s) 312
BpuEI CTTGAG 2 cut(s) 581, 712
BpuMI CCSGG 3 cut(s) 435, 588, 1350
BsaBI GATNNNNATC 1 cut(s) 507
BsaHI GRCGYC 1 cut(s) 1549
BsaI GGTCTC 2 cut(s) 849, 1766
BsaJI CCNNGG 6 cut(s) 227, 247, 983, 1174, 1316, 1457
BsaWI WCCGGW 2 cut(s) 1037, 1402
Bsc4I CCNNNNNNNGG 4 cut(s) 779, 989, 1285, 1409
Bse1I ACTGG 7 cut(s) 82, 844, 931, 999, 1227, 1762, 1899
Bse3DI GCAATG 1 cut(s) 1102
Bse8I GATNNNNATC 1 cut(s) 507
BseAI TCCGGA 2 cut(s) 1037, 1402
BseBI CCWGG 5 cut(s) 228, 267, 513, 736, 1176
BseDI CCNNGG 6 cut(s) 227, 247, 983, 1174, 1316, 1457
BseGI GGATG 2 cut(s) 1453, 1885
BseJI GATNNNNATC 1 cut(s) 507
BseLI CCNNNNNNNGG 4 cut(s) 779, 989, 1285, 1409
BseMI GCAATG 1 cut(s) 1102
BseMII CTCAG 4 cut(s) 326, 800, 860, 1554
BseNI ACTGG 7 cut(s) 82, 844, 931, 999, 1227, 1762, 1899
BseRI GAGGAG 1 cut(s) 1784
BseSI GKGCMC 1 cut(s) 1961
BseXI GCAGC 4 cut(s) 730, 889, 1026, 1541
BseYI CCCAGC 1 cut(s) 1828
BsgI GTGCAG 2 cut(s) 843, 1071
BshFI GGCC 3 cut(s) 246, 274, 1658
BshNI GGYRCC 1 cut(s) 1548
BsiHKAI GWGCWC 1 cut(s) 1107
BsiSI CCGG 5 cut(s) 435, 588, 1038, 1350, 1403
BslFI GGGAC 1 cut(s) 142
BslI CCNNNNNNNGG 4 cut(s) 779, 989, 1285, 1409
BsmAI GTCTC 5 cut(s) 805, 849, 939, 1674, 1766
BsmFI GGGAC 1 cut(s) 142
BsmI GAATGC 4 cut(s) 640, 705, 1466, 1588
BsnI GGCC 3 cut(s) 246, 274, 1658
Bso31I GGTCTC 2 cut(s) 849, 1766
Bsp1286I GDGCHC 3 cut(s) 806, 1107, 1961
Bsp13I TCCGGA 2 cut(s) 1037, 1402
Bsp143I GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
BspANI GGCC 3 cut(s) 246, 274, 1658
BspCNI CTCAG 4 cut(s) 325, 801, 859, 1555
BspEI TCCGGA 2 cut(s) 1037, 1402
BspLI GGNNCC 6 cut(s) 130, 1152, 1225, 1265, 1550, 1842
BspPI GGATC 5 cut(s) 1145, 1158, 1258, 1271, 1432
BspQI GCTCTTC 1 cut(s) 523
BspT107I GGYRCC 1 cut(s) 1548
BspTI CTTAAG 1 cut(s) 1183
BspTNI GGTCTC 2 cut(s) 849, 1766
BsrDI GCAATG 1 cut(s) 1102
BsrI ACTGG 7 cut(s) 82, 844, 931, 999, 1227, 1762, 1899
BssECI CCNNGG 6 cut(s) 227, 247, 983, 1174, 1316, 1457
BssMI GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
BssNI GRCGYC 1 cut(s) 1549
BssSI CACGAG 1 cut(s) 1005
BssT1I CCWWGG 4 cut(s) 247, 983, 1316, 1457
Bst2BI CACGAG 1 cut(s) 1005
Bst2UI CCWGG 5 cut(s) 228, 267, 513, 736, 1176
Bst4CI ACNGT 4 cut(s) 115, 898, 956, 1935
Bst6I CTCTTC 1 cut(s) 523
BstACI GRCGYC 1 cut(s) 1549
BstAFI CTTAAG 1 cut(s) 1183
BstAPI GCANNNNNTGC 1 cut(s) 635
BstC8I GCNNGC 3 cut(s) 548, 1072, 1977
BstDEI CTNAG 4 cut(s) 312, 809, 846, 1563
BstENI CCTNNNNNAGG 1 cut(s) 777
BstF5I GGATG 2 cut(s) 1453, 1885
BstH2I RGCGCY 1 cut(s) 1552
BstHHI GCGC 3 cut(s) 1551, 1593, 1689
BstKTI GATC 6 cut(s) 191, 236, 890, 1153, 1266, 1427
BstMAI GTCTC 5 cut(s) 805, 849, 939, 1674, 1766
BstMBI GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
BstMWI GCNNNNNNNGC 8 cut(s) 252, 635, 644, 1023, 1080, 1529, 1672, 1981
BstNI CCWGG 5 cut(s) 228, 267, 513, 736, 1176
BstNSI RCATGY 5 cut(s) 320, 651, 973, 1687, 1708
BstSCI CCNGG 8 cut(s) 226, 265, 433, 511, 586, 734, 1174, 1348
BstSFI CTRYAG 3 cut(s) 832, 1194, 1335
BstSLI GKGCMC 1 cut(s) 1961
BstV1I GCAGC 4 cut(s) 730, 889, 1026, 1541
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 3 cut(s) 233, 1150, 1263
BstXI CCANNNNNNTGG 1 cut(s) 1161
BstYI RGATCY 3 cut(s) 233, 1150, 1263
BsuRI GGCC 3 cut(s) 246, 274, 1658
BtsCI GGATG 2 cut(s) 1453, 1885
BtsI GCAGTG 1 cut(s) 445
BtsIMutI CAGTG 7 cut(s) 42, 75, 445, 806, 837, 1755, 1940
Cac8I GCNNGC 3 cut(s) 548, 1072, 1977
CaiI CAGNNNCTG 2 cut(s) 902, 1028
CfoI GCGC 3 cut(s) 1551, 1593, 1689
Cfr13I GGNCC 7 cut(s) 59, 129, 272, 641, 920, 1202, 1385
CsiI ACCWGGT 1 cut(s) 265
Csp6I GTAC 1 cut(s) 567
CspCI CAANNNNNGTGG 4 cut(s) 106, 141, 388, 423
CviQI GTAC 1 cut(s) 567
DdeI CTNAG 4 cut(s) 312, 809, 846, 1563
DinI GGCGCC 1 cut(s) 1550
DpnI GATC 6 cut(s) 190, 235, 889, 1152, 1265, 1426
DpnII GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
DraI TTTAAA 1 cut(s) 327
EaeI YGGCCR 1 cut(s) 1656
Eam1104I CTCTTC 1 cut(s) 523
EarI CTCTTC 1 cut(s) 523
Eco130I CCWWGG 4 cut(s) 247, 983, 1316, 1457
Eco24I GRGCYC 1 cut(s) 806
Eco31I GGTCTC 2 cut(s) 849, 1766
Eco47I GGWCC 6 cut(s) 59, 129, 641, 920, 1202, 1385
Eco57I CTGAAG 1 cut(s) 696
EcoNI CCTNNNNNAGG 1 cut(s) 777
EcoO109I RGGNCCY 1 cut(s) 1385
EcoRI GAATTC 1 cut(s) 1823
EcoRII CCWGG 5 cut(s) 226, 265, 511, 734, 1174
EcoT14I CCWWGG 4 cut(s) 247, 983, 1316, 1457
EcoT22I ATGCAT 1 cut(s) 948
EcoT38I GRGCYC 1 cut(s) 806
EgeI GGCGCC 1 cut(s) 1550
EheI GGCGCC 1 cut(s) 1550
ErhI CCWWGG 4 cut(s) 247, 983, 1316, 1457
FaqI GGGAC 1 cut(s) 142
Fnu4HI GCNGC 4 cut(s) 719, 903, 1015, 1530
FokI GGATG 2 cut(s) 1440, 1892
FriOI GRGCYC 1 cut(s) 806
Fsp4HI GCNGC 4 cut(s) 719, 903, 1015, 1530
FspI TGCGCA 1 cut(s) 1592
GlaI GCGC 3 cut(s) 1550, 1592, 1688
GluI GCNGC 4 cut(s) 719, 903, 1015, 1530
GsaI CCCAGC 1 cut(s) 1832
GsuI CTGGAG 1 cut(s) 1210
HaeII RGCGCY 1 cut(s) 1552
HaeIII GGCC 3 cut(s) 246, 274, 1658
HapII CCGG 5 cut(s) 435, 588, 1038, 1350, 1403
HhaI GCGC 3 cut(s) 1551, 1593, 1689
Hin1I GRCGYC 1 cut(s) 1549
Hin6I GCGC 3 cut(s) 1549, 1591, 1687
HinP1I GCGC 3 cut(s) 1549, 1591, 1687
HincII GTYRAC 1 cut(s) 1445
HindII GTYRAC 1 cut(s) 1445
HinfI GANTC 6 cut(s) 854, 1340, 1406, 1567, 1611, 1951
HpaII CCGG 5 cut(s) 435, 588, 1038, 1350, 1403
HphI GGTGA 3 cut(s) 92, 1499, 1610
Hpy166II GTNNAC 3 cut(s) 83, 1004, 1445
Hpy8I GTNNAC 3 cut(s) 83, 1004, 1445
HpyAV CCTTC 7 cut(s) 281, 285, 669, 720, 783, 1215, 1398
HpyCH4III ACNGT 4 cut(s) 115, 898, 956, 1935
HpyCH4IV ACGT 3 cut(s) 569, 819, 1738
HpyF10VI GCNNNNNNNGC 8 cut(s) 252, 635, 644, 1023, 1080, 1529, 1672, 1981
HpyF3I CTNAG 4 cut(s) 312, 809, 846, 1563
HpySE526I ACGT 3 cut(s) 569, 819, 1738
Hsp92I GRCGYC 1 cut(s) 1549
HspAI GCGC 3 cut(s) 1549, 1591, 1687
KasI GGCGCC 1 cut(s) 1548
Kpn2I TCCGGA 2 cut(s) 1037, 1402
Kzo9I GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
LguI GCTCTTC 1 cut(s) 523
LmnI GCTCC 5 cut(s) 160, 755, 1102, 1229, 1861
Lsp1109I GCAGC 4 cut(s) 730, 889, 1026, 1541
LweI GCATC 3 cut(s) 370, 767, 1653
MabI ACCWGGT 1 cut(s) 265
MaeII ACGT 3 cut(s) 569, 819, 1738
MaeIII GTNAC 4 cut(s) 353, 784, 1123, 1813
MalI GATC 6 cut(s) 190, 235, 889, 1152, 1265, 1426
MboI GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
MboII GAAGA 7 cut(s) 206, 509, 510, 897, 1076, 1410, 1960
MfeI CAATTG 1 cut(s) 529
MflI RGATCY 3 cut(s) 233, 1150, 1263
MhlI GDGCHC 3 cut(s) 806, 1107, 1961
Mly113I GGCGCC 1 cut(s) 1549
MlyI GAGTC 1 cut(s) 1620
MmeI TCCRAC 6 cut(s) 93, 733, 1142, 1178, 1307, 1455
Mph1103I ATGCAT 1 cut(s) 948
MroI TCCGGA 2 cut(s) 1037, 1402
MroXI GAANNNNTTC 2 cut(s) 1084, 1417
MseI TTAA 6 cut(s) 326, 671, 1058, 1184, 1500, 1929
MspA1I CMGCKG 2 cut(s) 881, 1532
MspCI CTTAAG 1 cut(s) 1183
MspI CCGG 5 cut(s) 435, 588, 1038, 1350, 1403
MspR9I CCNGG 8 cut(s) 228, 267, 435, 513, 588, 736, 1176, 1350
MunI CAATTG 1 cut(s) 529
Mva1269I GAATGC 4 cut(s) 640, 705, 1466, 1588
MvaI CCWGG 5 cut(s) 228, 267, 513, 736, 1176
MwoI GCNNNNNNNGC 8 cut(s) 252, 635, 644, 1023, 1080, 1529, 1672, 1981
NarI GGCGCC 1 cut(s) 1549
NciI CCSGG 3 cut(s) 435, 588, 1350
NdeII GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
NlaIV GGNNCC 6 cut(s) 130, 1152, 1225, 1265, 1550, 1842
NmeAIII GCCGAG 1 cut(s) 1684
NsbI TGCGCA 1 cut(s) 1592
NsiI ATGCAT 1 cut(s) 948
NspI RCATGY 5 cut(s) 320, 651, 973, 1687, 1708
PciI ACATGT 1 cut(s) 1704
PciSI GCTCTTC 1 cut(s) 523
PctI GAATGC 4 cut(s) 640, 705, 1466, 1588
PdmI GAANNNNTTC 2 cut(s) 1084, 1417
PfeI GAWTC 5 cut(s) 854, 1340, 1406, 1567, 1951
PkrI GCNGC 4 cut(s) 720, 904, 1016, 1531
PleI GAGTC 1 cut(s) 1619
PluTI GGCGCC 1 cut(s) 1552
PpsI GAGTC 1 cut(s) 1619
PpuMI RGGWCCY 1 cut(s) 1385
PscI ACATGT 1 cut(s) 1704
PsiI TTATAA 2 cut(s) 654, 1368
Psp5II RGGWCCY 1 cut(s) 1385
Psp6I CCWGG 5 cut(s) 226, 265, 511, 734, 1174
PspFI CCCAGC 1 cut(s) 1828
PspGI CCWGG 5 cut(s) 226, 265, 511, 734, 1174
PspN4I GGNNCC 6 cut(s) 130, 1152, 1225, 1265, 1550, 1842
PspPI GGNCC 7 cut(s) 59, 129, 272, 641, 920, 1202, 1385
PspPPI RGGWCCY 1 cut(s) 1385
PstNI CAGNNNCTG 2 cut(s) 902, 1028
PsuI RGATCY 3 cut(s) 233, 1150, 1263
PvuII CAGCTG 2 cut(s) 881, 1532
RsaI GTAC 1 cut(s) 568
RsaNI GTAC 1 cut(s) 567
SapI GCTCTTC 1 cut(s) 523
SaqAI TTAA 6 cut(s) 326, 671, 1058, 1184, 1500, 1929
SatI GCNGC 4 cut(s) 719, 903, 1015, 1530
Sau3AI GATC 6 cut(s) 188, 233, 887, 1150, 1263, 1424
Sau96I GGNCC 7 cut(s) 59, 129, 272, 641, 920, 1202, 1385
SchI GAGTC 1 cut(s) 1620
ScrFI CCNGG 8 cut(s) 228, 267, 435, 513, 588, 736, 1176, 1350
SduI GDGCHC 3 cut(s) 806, 1107, 1961
SexAI ACCWGGT 1 cut(s) 265
SfaNI GCATC 3 cut(s) 370, 767, 1653
SfcI CTRYAG 3 cut(s) 832, 1194, 1335
SfoI GGCGCC 1 cut(s) 1550
SinI GGWCC 6 cut(s) 59, 129, 641, 920, 1202, 1385
SmiI ATTTAAAT 1 cut(s) 327
SmlI CTYRAG 3 cut(s) 560, 727, 1183
SmoI CTYRAG 3 cut(s) 560, 727, 1183
SspDI GGCGCC 1 cut(s) 1548
StyD4I CCNGG 8 cut(s) 226, 265, 433, 511, 586, 734, 1174, 1348
StyI CCWWGG 4 cut(s) 247, 983, 1316, 1457
SwaI ATTTAAAT 1 cut(s) 327
TaaI ACNGT 4 cut(s) 115, 898, 956, 1935
TaiI ACGT 3 cut(s) 572, 822, 1741
TaqI TCGA 2 cut(s) 625, 1614
TfiI GAWTC 5 cut(s) 854, 1340, 1406, 1567, 1951
Tru1I TTAA 6 cut(s) 326, 671, 1058, 1184, 1500, 1929
Tru9I TTAA 6 cut(s) 326, 671, 1058, 1184, 1500, 1929
TscAI CASTG 7 cut(s) 49, 82, 445, 813, 844, 1762, 1940
TseI GCWGC 4 cut(s) 718, 902, 1014, 1529
TspDTI ATGAA 5 cut(s) 456, 765, 1229, 1630, 1805
TspGWI ACGGA 1 cut(s) 1301
TspRI CASTG 7 cut(s) 49, 82, 445, 813, 844, 1762, 1940
Vha464I CTTAAG 1 cut(s) 1183
VpaK11BI GGWCC 6 cut(s) 59, 129, 641, 920, 1202, 1385
XagI CCTNNNNNAGG 1 cut(s) 777
XapI RAATTY 7 cut(s) 100, 322, 392, 910, 1138, 1307, 1823
XbaI TCTAGA 2 cut(s) 92, 1088
XceI RCATGY 5 cut(s) 320, 651, 973, 1687, 1708
XcmI CCANNNNNNNNNTGG 1 cut(s) 1006
XmaJI CCTAGG 1 cut(s) 1457
XmnI GAANNNNTTC 2 cut(s) 1084, 1417
Zsp2I ATGCAT 1 cut(s) 948
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.