Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002668

Physical Location & Seq

Genomic Coordinates Reverse (-)

59326960 .. 59333675

Gene Structure 6716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00209060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGCAAGGTCAAGGGAGTGGACTTGATACTTTTTCAGAAATCACTGATGTTGGTCTTGGACCTGTTTCCAACAGCACTGTCATGACACCCATAGCTTCACTGTTTCCAGGTGAACCTAGCTCTAGATTGAATTTGCAAAACACGGTCAATGATGGTGGGACCAGAATGGAACATGGTTGGTCTGCTCCATATAATGCTTGTCCTGTGATTGCTCAAAGATCAGAAGATAGACGAATTGAGCCAAATATCCTTTTTCCTGGTAGATCTCTTATTGGCCTTGGTGGCAATCAGATACCAGGTGGGCCTTCTTTTTCAGAAGGTTCTAGCTCAAGTTATATCCATCAGCATGTAAATTTAAATGCAGGATACGTTGAAAATAGTGGTAACTATGGGCATGGTATGGAAGCTGATGCAGACCCTAAATTCTACAAGTCAAGTGGATTAGAAGCAGAACAGACATCTCCAGGCAGTGCTTCACATGATATTGTTGGGACTTCATCTGGAAGCTCTGATTATATGGTTGGGGAAGACGATGGTAATCCAGGCTCTTCTTTTGGCAATTGGGGTTTATCCTGCAAGCGAAAGGCTCTTGAGGGTACGTCAGGGCAGTCTTATCCCGGTGGAAGTTCTAGCTCATTTCCTCAACCTGAAAGTCGATCATGGAATGCTGGTCCTGCATGTTATAATCCTTCTAGTAGTTTAAGTTTATCTACGCCCCGTAATTCTCCCAGTGGCATTCCTTCAGAGCAGCAGACCTCAAGAACCAGGATTGGTTTGAGAGTTGGAGCATCTGATACCTTTCCTTCATTAGGTGTTACAGGAAATGCAGAGAGCCCACTGAGACAATATGTTAGGGGTTTCTGTAGTACTGGGTCTCAGCAAGAATCTGCACCATCAAACTTATCATCAGCTGGAAGATCGACAACAGTAGCTGCAACAAATTCGGGTGGTCCTCAAAGCCAGTCTCCTGCTATGCATATCAACAGTTCGTCAGGAAACATGCTTCCTTTCCCTTGGAATGGTGCTTCCAGTTCACGAGTGGGCAGCTTATCAGGCTCTGTTATGTCCGGATATAGAGGTGCTGAGTTAAGAGAAGAAACAAGCTCACGAAGCATTTCTAGAAACAATGTGGAGCACCCCATGTTTGTAGCTGTTACTGATATGAGAAATTCAGCACAGGATCCAACAGATTCTCAACCCGGAGGTCATAATCATTATAATCCAATACCATCAGGACCTTCTGCTTCCTCTCAGGATTCTGGAACTTCTTCTGGATCAAATAATCAGGGTCGTCAACAACCACATCCTAGGTCGGCATTCTTGTTGGACAGACAAGGTGATGATGTTCTTAATATGCCCCATTCGCTACGGGCGTTAGCAGCTGACATTGATGGGAGGCGCCGACTTATATCTGAGATTCGTCAAGTTTTGAATGCTATGCGCAGGGGTGAGAACTTACGAGTCGAGGAACTATTAGCATTGGAGGAACGTATAGGAGATGTTAGCACTGGATTGAGTGAGGAGACCATATTGAAATTGATGAAACAGAGAAAATGTTTGTCTGTTACAACAGAGTTCCCAGCAGATATTGAACCCTGCTGTATCTGTCAGTATGAACCATTTGTCATTTGCTACGTTTGTGGAATATGGACTGTTTCGCTTATTGTTGTACTATGCAAGGATTTTACTGTAATTCAACTGCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000209 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006357 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006928 GO:0006935 GO:0007275 GO:0007399 GO:0007409 GO:0007411 GO:0007568 GO:0008045 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009653 GO:0009791 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010228 GO:0010259 GO:0010468 GO:0010498 GO:0010556 GO:0010646 GO:0010647 GO:0016043 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0021675 GO:0022008 GO:0022414 GO:0023051 GO:0023056 GO:0030030 GO:0030154 GO:0030163 GO:0030182 GO:0030510 GO:0030513 GO:0031175 GO:0031323 GO:0031326 GO:0032446 GO:0032501 GO:0032502 GO:0032989 GO:0032990 GO:0032991 GO:0035107 GO:0035108 GO:0035136 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0048468 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048608 GO:0048666 GO:0048667 GO:0048699 GO:0048731 GO:0048736 GO:0048812 GO:0048856 GO:0048858 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051603 GO:0060173 GO:0060255 GO:0060384 GO:0061061 GO:0061458 GO:0061564 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0097485 GO:0120036 GO:0120039 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-RING_2

Protein Analysis

568

Amino Acids

60.27

Weight (kDa)

5.53

Isoelectric Point (pI)

64.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002668)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT2G15530 AT4G34040
fragaria_vesca	FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790 FvH4_2g05790
malus_domestica	MD00G1050100.v1.1 MD05G1083400.v1.1
prunus_persica	Prupe.8G127800_v2.0.a1 Prupe.8G127800_v2.0.a1 Prupe.8G127800_v2.0.a1 Prupe.8G127800_v2.0.a1
pyrus_communis	pycom05g08030 pycom10g08090
rosa_chinensis	RchiOBHm_Chr6g0257951
rosa_laevigata	RLG00000014738
rosa_multiflora	Rmu_sc0000077.1_g000045
rosa_roxburghii	Rroxscaffold_7G00209060
rosa_rugosa	Rorug05G0566000 Rorug05G0566100 Rorug05G0566100 Rorug05G0566200 Rorug05G0566300 Rorug05G0566300 Rorug05G0566300 Rorug05G0566400
rosa_samantha	Rh6AG084000 Rh6BG078600 Rh6CG073200 Rh6DG070200
rosa_wichuraiana	Rw6G007550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	684, 1218
Acc16I	TGCGCA	1 cut(s)	1442
AccB1I	GGYRCC	1 cut(s)	1398
AccIII	TCCGGA	1 cut(s)	1067
AclWI	GGATC	3 cut(s)	1175, 1188, 1282
AcsI	RAATTY	5 cut(s)	130, 352, 422, 940, 1168
AcuI	CTGAAG	1 cut(s)	726
AcyI	GRCGYC	1 cut(s)	1399
AfaI	GTAC	3 cut(s)	598, 868, 1671
AfiI	CCNNNNNNNGG	2 cut(s)	809, 1019
AgsI	TTSAA	6 cut(s)	130, 374, 1432, 1534, 1592, 1697
AjnI	CCWGG	6 cut(s)	106, 256, 295, 463, 541, 764
Alw21I	GWGCWC	1 cut(s)	1137
Alw26I	GTCTC	4 cut(s)	835, 879, 969, 1517
AlwI	GGATC	3 cut(s)	1175, 1188, 1282
AlwNI	CAGNNNCTG	2 cut(s)	932, 1058
Aor13HI	TCCGGA	1 cut(s)	1067
AoxI	GGCC	2 cut(s)	274, 302
ApeKI	GCWGC	4 cut(s)	748, 932, 1044, 1379
ApoI	RAATTY	5 cut(s)	130, 352, 422, 940, 1168
Asp700I	GAANNNNTTC	2 cut(s)	1114, 1267
AspA2I	CCTAGG	1 cut(s)	1307
AspLEI	GCGC	2 cut(s)	1401, 1443
AspS9I	GGNCC	6 cut(s)	59, 159, 302, 671, 950, 1235
AsuC2I	CCSGG	2 cut(s)	618, 1200
AsuHPI	GGTGA	3 cut(s)	122, 1349, 1460
AvaII	GGWCC	5 cut(s)	59, 159, 671, 950, 1235
AvrII	CCTAGG	1 cut(s)	1307
BamHI	GGATCC	1 cut(s)	1180
BanI	GGYRCC	1 cut(s)	1398
BanII	GRGCYC	1 cut(s)	836
BauI	CACGAG	1 cut(s)	1035
BbsI	GAAGAC	1 cut(s)	534
Bbv12I	GWGCWC	1 cut(s)	1137
BbvI	GCAGC	4 cut(s)	760, 919, 1056, 1391
BccI	CCATC	6 cut(s)	146, 348, 527, 901, 1237, 1385
BcgI	CGANNNNNNTGC	2 cut(s)	924, 958
BciT130I	CCWGG	6 cut(s)	108, 258, 297, 465, 543, 766
BciVI	GTATCC	1 cut(s)	359
BcnI	CCSGG	2 cut(s)	618, 1200
BcoDI	GTCTC	4 cut(s)	835, 879, 969, 1517
BfaI	CTAG	7 cut(s)	117, 123, 324, 630, 693, 1119, 1308
BfmI	CTRYAG	1 cut(s)	862
BfoI	RGCGCY	1 cut(s)	1402
BfuI	GTATCC	1 cut(s)	359
BglI	GCCNNNNNGGC	1 cut(s)	282
BglII	AGATCT	1 cut(s)	263
BisI	GCNGC	4 cut(s)	749, 933, 1045, 1380
BlnI	CCTAGG	1 cut(s)	1307
BlsI	GCNGC	4 cut(s)	750, 934, 1046, 1381
BmcAI	AGTACT	1 cut(s)	868
Bme1390I	CCNGG	8 cut(s)	108, 258, 297, 465, 543, 618, 766, 1200
Bme18I	GGWCC	5 cut(s)	59, 159, 671, 950, 1235
BmgT120I	GGNCC	6 cut(s)	59, 159, 302, 671, 950, 1235
BmiI	GGNNCC	3 cut(s)	160, 1182, 1400
BmrFI	CCNGG	8 cut(s)	108, 258, 297, 465, 543, 618, 766, 1200
BmrI	ACTGGG	2 cut(s)	723, 879
BmsI	GCATC	2 cut(s)	400, 797
BmuI	ACTGGG	2 cut(s)	723, 879
BpiI	GAAGAC	1 cut(s)	534
BpmI	CTGGAG	1 cut(s)	447
BpuEI	CTTGAG	3 cut(s)	313, 611, 742
BpuMI	CCSGG	2 cut(s)	618, 1200
BsaBI	GATNNNNATC	1 cut(s)	537
BsaHI	GRCGYC	1 cut(s)	1399
BsaI	GGTCTC	2 cut(s)	879, 1517
BsaJI	CCNNGG	3 cut(s)	277, 1013, 1307
BsaWI	WCCGGW	1 cut(s)	1067
Bsc4I	CCNNNNNNNGG	2 cut(s)	809, 1019
Bse1I	ACTGG	5 cut(s)	729, 874, 961, 1029, 1513
Bse8I	GATNNNNATC	1 cut(s)	537
BseAI	TCCGGA	1 cut(s)	1067
BseBI	CCWGG	6 cut(s)	108, 258, 297, 465, 543, 766
BseDI	CCNNGG	3 cut(s)	277, 1013, 1307
BseGI	GGATG	1 cut(s)	1303
BseJI	GATNNNNATC	1 cut(s)	537
BseLI	CCNNNNNNNGG	2 cut(s)	809, 1019
BseMII	CTCAG	5 cut(s)	830, 890, 1074, 1265, 1404
BseNI	ACTGG	5 cut(s)	729, 874, 961, 1029, 1513
BseRI	GAGGAG	1 cut(s)	1535
BseXI	GCAGC	4 cut(s)	760, 919, 1056, 1391
BseYI	CCCAGC	1 cut(s)	1579
BsgI	GTGCAG	1 cut(s)	873
BshFI	GGCC	2 cut(s)	276, 304
BshNI	GGYRCC	1 cut(s)	1398
BsiHKAI	GWGCWC	1 cut(s)	1137
BsiSI	CCGG	3 cut(s)	618, 1068, 1200
BslFI	GGGAC	2 cut(s)	172, 505
BslI	CCNNNNNNNGG	2 cut(s)	809, 1019
BsmAI	GTCTC	4 cut(s)	835, 879, 969, 1517
BsmFI	GGGAC	2 cut(s)	172, 505
BsmI	GAATGC	4 cut(s)	670, 735, 1316, 1438
BsnI	GGCC	2 cut(s)	276, 304
Bso31I	GGTCTC	2 cut(s)	879, 1517
Bsp1286I	GDGCHC	2 cut(s)	836, 1137
Bsp13I	TCCGGA	1 cut(s)	1067
Bsp143I	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
BspANI	GGCC	2 cut(s)	276, 304
BspCNI	CTCAG	5 cut(s)	831, 889, 1075, 1264, 1405
BspEI	TCCGGA	1 cut(s)	1067
BspHI	TCATGA	1 cut(s)	81
BspLI	GGNNCC	3 cut(s)	160, 1182, 1400
BspPI	GGATC	3 cut(s)	1175, 1188, 1282
BspQI	GCTCTTC	1 cut(s)	553
BspT107I	GGYRCC	1 cut(s)	1398
BspTNI	GGTCTC	2 cut(s)	879, 1517
BsrI	ACTGG	5 cut(s)	729, 874, 961, 1029, 1513
BssECI	CCNNGG	3 cut(s)	277, 1013, 1307
BssMI	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
BssNI	GRCGYC	1 cut(s)	1399
BssSI	CACGAG	1 cut(s)	1035
BssT1I	CCWWGG	3 cut(s)	277, 1013, 1307
Bst2BI	CACGAG	1 cut(s)	1035
Bst2UI	CCWGG	6 cut(s)	108, 258, 297, 465, 543, 766
Bst4CI	ACNGT	7 cut(s)	79, 102, 145, 928, 986, 1654, 1690
Bst6I	CTCTTC	1 cut(s)	553
BstACI	GRCGYC	1 cut(s)	1399
BstC8I	GCNNGC	1 cut(s)	578
BstDEI	CTNAG	5 cut(s)	839, 876, 1083, 1251, 1413
BstENI	CCTNNNNNAGG	1 cut(s)	807
BstF5I	GGATG	1 cut(s)	1303
BstH2I	RGCGCY	1 cut(s)	1402
BstHHI	GCGC	2 cut(s)	1401, 1443
BstKTI	GATC	6 cut(s)	221, 266, 659, 920, 1183, 1277
BstMAI	GTCTC	4 cut(s)	835, 879, 969, 1517
BstMBI	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
BstMWI	GCNNNNNNNGC	6 cut(s)	282, 674, 1053, 1110, 1363, 1379
BstNI	CCWGG	6 cut(s)	108, 258, 297, 465, 543, 766
BstNSI	RCATGY	3 cut(s)	350, 681, 1003
BstSCI	CCNGG	8 cut(s)	106, 256, 295, 463, 541, 616, 764, 1198
BstSFI	CTRYAG	1 cut(s)	862
BstV1I	GCAGC	4 cut(s)	760, 919, 1056, 1391
BstV2I	GAAGAC	1 cut(s)	534
BstX2I	RGATCY	2 cut(s)	263, 1180
BstYI	RGATCY	2 cut(s)	263, 1180
BsuI	GTATCC	1 cut(s)	359
BsuRI	GGCC	2 cut(s)	276, 304
BtsCI	GGATG	1 cut(s)	1303
BtsI	GCAGTG	1 cut(s)	475
BtsIMutI	CAGTG	7 cut(s)	42, 75, 98, 475, 736, 836, 1506
Cac8I	GCNNGC	1 cut(s)	578
CaiI	CAGNNNCTG	2 cut(s)	932, 1058
CciI	TCATGA	1 cut(s)	81
CfoI	GCGC	2 cut(s)	1401, 1443
Cfr13I	GGNCC	6 cut(s)	59, 159, 302, 671, 950, 1235
CsiI	ACCWGGT	1 cut(s)	295
Csp6I	GTAC	3 cut(s)	597, 867, 1670
CspCI	CAANNNNNGTGG	4 cut(s)	136, 171, 418, 453
CviAII	CATG	9 cut(s)	82, 173, 347, 395, 479, 660, 678, 1000, 1141
CviQI	GTAC	3 cut(s)	597, 867, 1670
DdeI	CTNAG	5 cut(s)	839, 876, 1083, 1251, 1413
DinI	GGCGCC	1 cut(s)	1400
DpnI	GATC	6 cut(s)	220, 265, 658, 919, 1182, 1276
DpnII	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
DraI	TTTAAA	1 cut(s)	357
Eam1104I	CTCTTC	1 cut(s)	553
EarI	CTCTTC	1 cut(s)	553
Eco130I	CCWWGG	3 cut(s)	277, 1013, 1307
Eco24I	GRGCYC	1 cut(s)	836
Eco31I	GGTCTC	2 cut(s)	879, 1517
Eco47I	GGWCC	5 cut(s)	59, 159, 671, 950, 1235
Eco57I	CTGAAG	1 cut(s)	726
EcoNI	CCTNNNNNAGG	1 cut(s)	807
EcoO109I	RGGNCCY	1 cut(s)	1235
EcoRII	CCWGG	6 cut(s)	106, 256, 295, 463, 541, 764
EcoT14I	CCWWGG	3 cut(s)	277, 1013, 1307
EcoT22I	ATGCAT	1 cut(s)	978
EcoT38I	GRGCYC	1 cut(s)	836
EgeI	GGCGCC	1 cut(s)	1400
EheI	GGCGCC	1 cut(s)	1400
ErhI	CCWWGG	3 cut(s)	277, 1013, 1307
FaeI	CATG	9 cut(s)	85, 176, 350, 398, 482, 663, 681, 1003, 1144
FaqI	GGGAC	2 cut(s)	172, 505
FatI	CATG	9 cut(s)	81, 172, 346, 394, 478, 659, 677, 999, 1140
Fnu4HI	GCNGC	4 cut(s)	749, 933, 1045, 1380
FokI	GGATG	1 cut(s)	1290
FriOI	GRGCYC	1 cut(s)	836
Fsp4HI	GCNGC	4 cut(s)	749, 933, 1045, 1380
FspBI	CTAG	7 cut(s)	117, 123, 324, 630, 693, 1119, 1308
FspI	TGCGCA	1 cut(s)	1442
GlaI	GCGC	2 cut(s)	1400, 1442
GluI	GCNGC	4 cut(s)	749, 933, 1045, 1380
GsaI	CCCAGC	1 cut(s)	1583
GsuI	CTGGAG	1 cut(s)	447
HaeII	RGCGCY	1 cut(s)	1402
HaeIII	GGCC	2 cut(s)	276, 304
HapII	CCGG	3 cut(s)	618, 1068, 1200
HhaI	GCGC	2 cut(s)	1401, 1443
Hin1I	GRCGYC	1 cut(s)	1399
Hin1II	CATG	9 cut(s)	85, 176, 350, 398, 482, 663, 681, 1003, 1144
Hin6I	GCGC	2 cut(s)	1399, 1441
HinP1I	GCGC	2 cut(s)	1399, 1441
HincII	GTYRAC	1 cut(s)	1295
HindII	GTYRAC	1 cut(s)	1295
HinfI	GANTC	5 cut(s)	884, 1190, 1256, 1417, 1461
HpaII	CCGG	3 cut(s)	618, 1068, 1200
HphI	GGTGA	3 cut(s)	122, 1349, 1460
Hpy166II	GTNNAC	4 cut(s)	20, 113, 1034, 1295
Hpy188I	TCNGA	8 cut(s)	37, 223, 291, 316, 511, 745, 793, 1414
Hpy8I	GTNNAC	4 cut(s)	20, 113, 1034, 1295
HpyAV	CCTTC	6 cut(s)	311, 315, 699, 750, 813, 1248
HpyCH4III	ACNGT	7 cut(s)	79, 102, 145, 928, 986, 1654, 1690
HpyCH4IV	ACGT	4 cut(s)	369, 599, 1489, 1635
HpyF10VI	GCNNNNNNNGC	6 cut(s)	282, 674, 1053, 1110, 1363, 1379
HpyF3I	CTNAG	5 cut(s)	839, 876, 1083, 1251, 1413
HpySE526I	ACGT	4 cut(s)	369, 599, 1489, 1635
Hsp92I	GRCGYC	1 cut(s)	1399
Hsp92II	CATG	9 cut(s)	85, 176, 350, 398, 482, 663, 681, 1003, 1144
HspAI	GCGC	2 cut(s)	1399, 1441
KasI	GGCGCC	1 cut(s)	1398
Kpn2I	TCCGGA	1 cut(s)	1067
Kzo9I	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
LguI	GCTCTTC	1 cut(s)	553
LmnI	GCTCC	3 cut(s)	190, 785, 1132
Lsp1109I	GCAGC	4 cut(s)	760, 919, 1056, 1391
LweI	GCATC	2 cut(s)	400, 797
MabI	ACCWGGT	1 cut(s)	295
MaeI	CTAG	7 cut(s)	117, 123, 324, 630, 693, 1119, 1308
MaeII	ACGT	4 cut(s)	369, 599, 1489, 1635
MaeIII	GTNAC	4 cut(s)	383, 814, 1153, 1564
MalI	GATC	6 cut(s)	220, 265, 658, 919, 1182, 1276
MboI	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
MboII	GAAGA	6 cut(s)	236, 539, 540, 927, 1106, 1260
MfeI	CAATTG	1 cut(s)	559
MflI	RGATCY	2 cut(s)	263, 1180
MhlI	GDGCHC	2 cut(s)	836, 1137
Mly113I	GGCGCC	1 cut(s)	1399
MlyI	GAGTC	1 cut(s)	1470
MmeI	TCCRAC	4 cut(s)	93, 763, 1208, 1305
Mph1103I	ATGCAT	1 cut(s)	978
MroI	TCCGGA	1 cut(s)	1067
MroXI	GAANNNNTTC	2 cut(s)	1114, 1267
MseI	TTAA	4 cut(s)	356, 701, 1088, 1350
MslI	CAYNNNNRTG	2 cut(s)	80, 345
MspA1I	CMGCKG	2 cut(s)	911, 1382
MspI	CCGG	3 cut(s)	618, 1068, 1200
MspR9I	CCNGG	8 cut(s)	108, 258, 297, 465, 543, 618, 766, 1200
MunI	CAATTG	1 cut(s)	559
Mva1269I	GAATGC	4 cut(s)	670, 735, 1316, 1438
MvaI	CCWGG	6 cut(s)	108, 258, 297, 465, 543, 766
MwoI	GCNNNNNNNGC	6 cut(s)	282, 674, 1053, 1110, 1363, 1379
NarI	GGCGCC	1 cut(s)	1399
NciI	CCSGG	2 cut(s)	618, 1200
NdeII	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
NlaIII	CATG	9 cut(s)	85, 176, 350, 398, 482, 663, 681, 1003, 1144
NlaIV	GGNNCC	3 cut(s)	160, 1182, 1400
NsbI	TGCGCA	1 cut(s)	1442
NsiI	ATGCAT	1 cut(s)	978
NspI	RCATGY	3 cut(s)	350, 681, 1003
PagI	TCATGA	1 cut(s)	81
PciSI	GCTCTTC	1 cut(s)	553
PcsI	WCGNNNNNNNCGW	1 cut(s)	1370
PctI	GAATGC	4 cut(s)	670, 735, 1316, 1438
PdmI	GAANNNNTTC	2 cut(s)	1114, 1267
PfeI	GAWTC	4 cut(s)	884, 1190, 1256, 1417
PkrI	GCNGC	4 cut(s)	750, 934, 1046, 1381
PleI	GAGTC	1 cut(s)	1469
PluTI	GGCGCC	1 cut(s)	1402
PpsI	GAGTC	1 cut(s)	1469
PpuMI	RGGWCCY	1 cut(s)	1235
PsiI	TTATAA	2 cut(s)	684, 1218
Psp5II	RGGWCCY	1 cut(s)	1235
Psp6I	CCWGG	6 cut(s)	106, 256, 295, 463, 541, 764
PspFI	CCCAGC	1 cut(s)	1579
PspGI	CCWGG	6 cut(s)	106, 256, 295, 463, 541, 764
PspN4I	GGNNCC	3 cut(s)	160, 1182, 1400
PspPI	GGNCC	6 cut(s)	59, 159, 302, 671, 950, 1235
PspPPI	RGGWCCY	1 cut(s)	1235
PstNI	CAGNNNCTG	2 cut(s)	932, 1058
PsuI	RGATCY	2 cut(s)	263, 1180
PvuII	CAGCTG	2 cut(s)	911, 1382
RsaI	GTAC	3 cut(s)	598, 868, 1671
RsaNI	GTAC	3 cut(s)	597, 867, 1670
RseI	CAYNNNNRTG	2 cut(s)	80, 345
SapI	GCTCTTC	1 cut(s)	553
SaqAI	TTAA	4 cut(s)	356, 701, 1088, 1350
SatI	GCNGC	4 cut(s)	749, 933, 1045, 1380
Sau3AI	GATC	6 cut(s)	218, 263, 656, 917, 1180, 1274
Sau96I	GGNCC	6 cut(s)	59, 159, 302, 671, 950, 1235
ScaI	AGTACT	1 cut(s)	868
SchI	GAGTC	1 cut(s)	1470
ScrFI	CCNGG	8 cut(s)	108, 258, 297, 465, 543, 618, 766, 1200
SduI	GDGCHC	2 cut(s)	836, 1137
SexAI	ACCWGGT	1 cut(s)	295
SfaNI	GCATC	2 cut(s)	400, 797
SfcI	CTRYAG	1 cut(s)	862
SfoI	GGCGCC	1 cut(s)	1400
SinI	GGWCC	5 cut(s)	59, 159, 671, 950, 1235
SmiI	ATTTAAAT	1 cut(s)	357
SmiMI	CAYNNNNRTG	2 cut(s)	80, 345
SmlI	CTYRAG	3 cut(s)	328, 590, 757
SmoI	CTYRAG	3 cut(s)	328, 590, 757
SspDI	GGCGCC	1 cut(s)	1398
SspMI	CTAG	7 cut(s)	117, 123, 324, 630, 693, 1119, 1308
StyD4I	CCNGG	8 cut(s)	106, 256, 295, 463, 541, 616, 764, 1198
StyI	CCWWGG	3 cut(s)	277, 1013, 1307
SwaI	ATTTAAAT	1 cut(s)	357
TaaI	ACNGT	7 cut(s)	79, 102, 145, 928, 986, 1654, 1690
TaiI	ACGT	4 cut(s)	372, 602, 1492, 1638
TaqI	TCGA	3 cut(s)	655, 920, 1464
TatI	WGTACW	2 cut(s)	866, 1669
TfiI	GAWTC	4 cut(s)	884, 1190, 1256, 1417
Tru1I	TTAA	4 cut(s)	356, 701, 1088, 1350
Tru9I	TTAA	4 cut(s)	356, 701, 1088, 1350
TscAI	CASTG	7 cut(s)	49, 82, 105, 475, 736, 843, 1513
TseI	GCWGC	4 cut(s)	748, 932, 1044, 1379
TspDTI	ATGAA	4 cut(s)	486, 795, 1556, 1629
TspRI	CASTG	7 cut(s)	49, 82, 105, 475, 736, 843, 1513
VpaK11BI	GGWCC	5 cut(s)	59, 159, 671, 950, 1235
XagI	CCTNNNNNAGG	1 cut(s)	807
XapI	RAATTY	5 cut(s)	130, 352, 422, 940, 1168
XbaI	TCTAGA	2 cut(s)	122, 1118
XceI	RCATGY	3 cut(s)	350, 681, 1003
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1036
XmaJI	CCTAGG	1 cut(s)	1307
XmnI	GAANNNNTTC	2 cut(s)	1114, 1267
XspI	CTAG	7 cut(s)	117, 123, 324, 630, 693, 1119, 1308
ZrmI	AGTACT	1 cut(s)	868
Zsp2I	ATGCAT	1 cut(s)	978

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.