Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005150

Physical Location & Seq

Genomic Coordinates Forward (+)

190863 .. 192793

Gene Structure 1931 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G01470.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 726 bp

ATGGACATCGCCCTCTTCTCACCGGCGTCGCTCTTTGCTGCAGACGGTGACTCCTCTGATGGAGAGACGACGGAGACGAGCCAGAACTTCGTTGAGAGAAATCATCAGTTTCCTGGAATTGAACTGCAAATTCGGGAATTTGGTTTCCACCAGCTGAATGCAAACTTGCTGTGGCCAGGTACATTTGCCTTTGCTGATTGGTTACTGCAGCATCGATATTTGATCGAAAGGCGGCGCTGTCTCGAGATAGGAAGTGGCACAGGGGCACTAGCTATATTTCTTAAGAAAGAGTTTAATCTCGACATAACTACTTCAGATTACAATGATCAAGAGATTGAAGACAATATTGTTCATAACTGTATTGCAAACAAGATTATCCCTTCTCTGCCTCATATCAAGCATACATGGGGTGATGAATTTCCAATTTCGGAACCAGATTGGGATTTGATCATAGCCAGTGATATCCTTCTATATGTGAAACAGTACCCAAACTTGATTAAGTCTCTGACTTTTCTTCTCAAAAAATACAAACCAACCAATGTCGTTAGTCCAGCAGAAGGAGCAGACACAGAACTGCCTCGTCCTGTGTTCTTAATGAGCTGGAGACGAAGAATTGGGAAAGACGATGAGTCTCTATTCTTTACGGGCTGCGAAGAAGCTGGCCTGGAGGTGAAGCATCTCGGAAACCGAGTTTATTGTATCAAGCTTAGAGAAAGCAACCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_16

Protein Analysis

241

Amino Acids

27.56

Weight (kDa)

5.1

Isoelectric Point (pI)

51.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_16	PF10294	64 - 200	9.6e-13	Lysine methyltransferase
Methyltransf_23	PF13489	98 - 199	5e-07	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005150)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G01470 AT5G01470 AT5G01470 AT5G01470 AT5G01470 AT5G01470 AT5G01470
fragaria_vesca	FvH4_6g11480 FvH4_6g11480 FvH4_6g11480 FvH4_6g11480 FvH4_6g11480 FvH4_6g11480
malus_domestica	MD04G1152000.v1.1
prunus_persica	Prupe.6G277100_v2.0.a1
pyrus_communis	pycom04g13800
rosa_chinensis	RchiOBHm_Chr3g0463171
rosa_laevigata	RLG00000024806
rosa_multiflora	Rmu_sc0001916.1_g000012 Rmu_sc0008079.1_g000006 Rmu_sc0008124.1_g000004
rosa_roxburghii	Rroxscaffold_6G00416860 Rroxscaffold_6G00416910
rosa_rugosa	Rorug03G0061900 Rorug03G0062000
rosa_samantha	Rh3BG124600 Rh3CG126600 Rh3DG125600
rosa_wichuraiana	Rw3G010170 Rw3G010200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	232
AcoI	YGGCCR	1 cut(s)	173
AcsI	RAATTY	3 cut(s)	129, 137, 416
AcuI	CTGAAG	1 cut(s)	297
AcyI	GRCGYC	1 cut(s)	26
AfaI	GTAC	2 cut(s)	181, 485
AfiI	CCNNNNNNNGG	1 cut(s)	557
AflII	CTTAAG	1 cut(s)	281
AgsI	TTSAA	2 cut(s)	122, 338
AhdI	GACNNNNNGTC	1 cut(s)	628
AjnI	CCWGG	3 cut(s)	112, 175, 663
AluBI	AGCT	5 cut(s)	154, 272, 600, 659, 706
AluI	AGCT	5 cut(s)	154, 272, 600, 659, 706
Alw26I	GTCTC	6 cut(s)	59, 68, 245, 507, 598, 636
Ama87I	CYCGRG	1 cut(s)	242
AoxI	GGCC	2 cut(s)	173, 661
ApeKI	GCWGC	3 cut(s)	38, 208, 648
ApoI	RAATTY	3 cut(s)	129, 137, 416
AspLEI	GCGC	1 cut(s)	237
AsuHPI	GGTGA	4 cut(s)	12, 59, 422, 682
AvaI	CYCGRG	1 cut(s)	242
BaeGI	GKGCMC	1 cut(s)	268
BalI	TGGCCA	1 cut(s)	175
BbsI	GAAGAC	1 cut(s)	345
BbvI	GCAGC	3 cut(s)	25, 220, 635
BccI	CCATC	1 cut(s)	53
BciT130I	CCWGG	3 cut(s)	114, 177, 665
BclI	TGATCA	2 cut(s)	325, 447
BcoDI	GTCTC	6 cut(s)	59, 68, 245, 507, 598, 636
BfaI	CTAG	1 cut(s)	269
BfmI	CTRYAG	2 cut(s)	39, 206
BfoI	RGCGCY	1 cut(s)	238
BfrI	CTTAAG	1 cut(s)	281
BisI	GCNGC	4 cut(s)	39, 209, 233, 649
BlsI	GCNGC	4 cut(s)	40, 210, 234, 650
Bme1390I	CCNGG	3 cut(s)	114, 177, 665
BmeRI	GACNNNNNGTC	1 cut(s)	628
BmeT110I	CYCGRG	1 cut(s)	242
BmiI	GGNNCC	1 cut(s)	432
BmrFI	CCNGG	3 cut(s)	114, 177, 665
BmsI	GCATC	2 cut(s)	220, 685
BpiI	GAAGAC	1 cut(s)	345
BpmI	CTGGAG	2 cut(s)	622, 686
Bsa29I	ATCGAT	1 cut(s)	214
BsaHI	GRCGYC	1 cut(s)	26
BsaXI	ACNNNNNCTCC	2 cut(s)	35, 65
Bsc4I	CCNNNNNNNGG	1 cut(s)	557
Bse118I	RCCGGY	1 cut(s)	22
Bse1I	ACTGG	1 cut(s)	456
BseBI	CCWGG	3 cut(s)	114, 177, 665
BseCI	ATCGAT	1 cut(s)	214
BseLI	CCNNNNNNNGG	1 cut(s)	557
BseNI	ACTGG	1 cut(s)	456
BseRI	GAGGAG	1 cut(s)	43
BseSI	GKGCMC	1 cut(s)	268
BseXI	GCAGC	3 cut(s)	25, 220, 635
BshFI	GGCC	2 cut(s)	175, 663
BshVI	ATCGAT	1 cut(s)	214
BsiHKCI	CYCGRG	1 cut(s)	242
BsiSI	CCGG	1 cut(s)	23
BslI	CCNNNNNNNGG	1 cut(s)	557
BsmAI	GTCTC	6 cut(s)	59, 68, 245, 507, 598, 636
BsmBI	CGTCTC	3 cut(s)	59, 68, 598
BsmI	GAATGC	1 cut(s)	163
BsnI	GGCC	2 cut(s)	175, 663
BsoBI	CYCGRG	1 cut(s)	242
Bsp1286I	GDGCHC	1 cut(s)	268
Bsp143I	GATC	3 cut(s)	222, 325, 447
BspACI	CCGC	1 cut(s)	232
BspANI	GGCC	2 cut(s)	175, 663
BspDI	ATCGAT	1 cut(s)	214
BspLI	GGNNCC	1 cut(s)	432
BspMAI	CTGCAG	2 cut(s)	43, 210
BspTI	CTTAAG	1 cut(s)	281
BsrFI	RCCGGY	1 cut(s)	22
BsrI	ACTGG	1 cut(s)	456
BssAI	RCCGGY	1 cut(s)	22
BssMI	GATC	3 cut(s)	222, 325, 447
BssNI	GRCGYC	1 cut(s)	26
Bst2UI	CCWGG	3 cut(s)	114, 177, 665
Bst4CI	ACNGT	3 cut(s)	47, 359, 483
Bst6I	CTCTTC	1 cut(s)	20
BstACI	GRCGYC	1 cut(s)	26
BstAFI	CTTAAG	1 cut(s)	281
BstC8I	GCNNGC	1 cut(s)	661
BstDEI	CTNAG	1 cut(s)	707
BstH2I	RGCGCY	1 cut(s)	238
BstHHI	GCGC	1 cut(s)	237
BstKTI	GATC	3 cut(s)	225, 328, 450
BstMAI	GTCTC	6 cut(s)	59, 68, 245, 507, 598, 636
BstMBI	GATC	3 cut(s)	222, 325, 447
BstMWI	GCNNNNNNNGC	1 cut(s)	560
BstNI	CCWGG	3 cut(s)	114, 177, 665
BstSCI	CCNGG	3 cut(s)	112, 175, 663
BstSFI	CTRYAG	2 cut(s)	39, 206
BstSLI	GKGCMC	1 cut(s)	268
BstV1I	GCAGC	3 cut(s)	25, 220, 635
BstV2I	GAAGAC	1 cut(s)	345
Bsu15I	ATCGAT	1 cut(s)	214
BsuRI	GGCC	2 cut(s)	175, 663
BsuTUI	ATCGAT	1 cut(s)	214
BtsIMutI	CAGTG	1 cut(s)	463
Cac8I	GCNNGC	1 cut(s)	661
CfoI	GCGC	1 cut(s)	237
Cfr10I	RCCGGY	1 cut(s)	22
ClaI	ATCGAT	1 cut(s)	214
CseI	GACGC	1 cut(s)	15
Csp6I	GTAC	2 cut(s)	180, 484
CviAII	CATG	1 cut(s)	405
CviQI	GTAC	2 cut(s)	180, 484
DdeI	CTNAG	1 cut(s)	707
DpnI	GATC	3 cut(s)	224, 327, 449
DpnII	GATC	3 cut(s)	222, 325, 447
DriI	GACNNNNNGTC	1 cut(s)	628
EaeI	YGGCCR	1 cut(s)	173
Eam1104I	CTCTTC	1 cut(s)	20
Eam1105I	GACNNNNNGTC	1 cut(s)	628
EarI	CTCTTC	1 cut(s)	20
Eco32I	GATATC	1 cut(s)	463
Eco57I	CTGAAG	1 cut(s)	297
Eco88I	CYCGRG	1 cut(s)	242
EcoRII	CCWGG	3 cut(s)	112, 175, 663
EcoRV	GATATC	1 cut(s)	463
Esp3I	CGTCTC	3 cut(s)	59, 68, 598
FaeI	CATG	1 cut(s)	408
FaiI	YATR	9 cut(s)	275, 305, 354, 393, 402, 406, 452, 472, 474
FatI	CATG	1 cut(s)	404
FbaI	TGATCA	2 cut(s)	325, 447
Fnu4HI	GCNGC	4 cut(s)	39, 209, 233, 649
Fsp4HI	GCNGC	4 cut(s)	39, 209, 233, 649
FspBI	CTAG	1 cut(s)	269
GlaI	GCGC	1 cut(s)	236
GluI	GCNGC	4 cut(s)	39, 209, 233, 649
GsuI	CTGGAG	2 cut(s)	622, 686
HaeII	RGCGCY	1 cut(s)	238
HaeIII	GGCC	2 cut(s)	175, 663
HapII	CCGG	1 cut(s)	23
HgaI	GACGC	1 cut(s)	15
HhaI	GCGC	1 cut(s)	237
Hin1I	GRCGYC	1 cut(s)	26
Hin1II	CATG	1 cut(s)	408
Hin6I	GCGC	1 cut(s)	235
HinP1I	GCGC	1 cut(s)	235
HindIII	AAGCTT	1 cut(s)	704
HinfI	GANTC	2 cut(s)	50, 629
HpaII	CCGG	1 cut(s)	23
HphI	GGTGA	4 cut(s)	12, 59, 422, 682
Hpy188I	TCNGA	6 cut(s)	58, 316, 430, 507, 683, 725
Hpy188III	TCNNGA	5 cut(s)	134, 242, 244, 299, 329
Hpy99I	CGWCG	2 cut(s)	31, 73
HpyAV	CCTTC	3 cut(s)	390, 476, 551
HpyCH4III	ACNGT	3 cut(s)	47, 359, 483
HpyCH4V	TGCA	5 cut(s)	41, 127, 161, 208, 365
HpyF10VI	GCNNNNNNNGC	1 cut(s)	560
HpyF3I	CTNAG	1 cut(s)	707
Hsp92I	GRCGYC	1 cut(s)	26
Hsp92II	CATG	1 cut(s)	408
HspAI	GCGC	1 cut(s)	235
Ksp22I	TGATCA	2 cut(s)	325, 447
Kzo9I	GATC	3 cut(s)	222, 325, 447
LmnI	GCTCC	1 cut(s)	560
Lsp1109I	GCAGC	3 cut(s)	25, 220, 635
LweI	GCATC	2 cut(s)	220, 685
MaeI	CTAG	1 cut(s)	269
MaeIII	GTNAC	2 cut(s)	47, 201
MalI	GATC	3 cut(s)	224, 327, 449
MboI	GATC	3 cut(s)	222, 325, 447
MboII	GAAGA	5 cut(s)	7, 350, 506, 621, 665
MhlI	GDGCHC	1 cut(s)	268
MlsI	TGGCCA	1 cut(s)	175
MluCI	AATT	6 cut(s)	117, 129, 137, 416, 423, 612
MluNI	TGGCCA	1 cut(s)	175
MlyI	GAGTC	2 cut(s)	44, 638
MnlI	CCTC	5 cut(s)	23, 64, 399, 588, 661
Mox20I	TGGCCA	1 cut(s)	175
MscI	TGGCCA	1 cut(s)	175
MseI	TTAA	4 cut(s)	282, 294, 498, 593
Msp20I	TGGCCA	1 cut(s)	175
MspA1I	CMGCKG	1 cut(s)	154
MspCI	CTTAAG	1 cut(s)	281
MspI	CCGG	1 cut(s)	23
MspR9I	CCNGG	3 cut(s)	114, 177, 665
Mva1269I	GAATGC	1 cut(s)	163
MvaI	CCWGG	3 cut(s)	114, 177, 665
MwoI	GCNNNNNNNGC	1 cut(s)	560
NdeII	GATC	3 cut(s)	222, 325, 447
NlaIII	CATG	1 cut(s)	408
NlaIV	GGNNCC	1 cut(s)	432
NmuCI	GTSAC	1 cut(s)	47
PaeR7I	CTCGAG	1 cut(s)	242
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PctI	GAATGC	1 cut(s)	163
PfoI	TCCNGGA	1 cut(s)	112
PkrI	GCNGC	4 cut(s)	40, 210, 234, 650
PleI	GAGTC	2 cut(s)	44, 637
PpsI	GAGTC	2 cut(s)	44, 637
Psp6I	CCWGG	3 cut(s)	112, 175, 663
PspGI	CCWGG	3 cut(s)	112, 175, 663
PspN4I	GGNNCC	1 cut(s)	432
PstI	CTGCAG	2 cut(s)	43, 210
PvuII	CAGCTG	1 cut(s)	154
RsaI	GTAC	2 cut(s)	181, 485
RsaNI	GTAC	2 cut(s)	180, 484
SaqAI	TTAA	4 cut(s)	282, 294, 498, 593
SatI	GCNGC	4 cut(s)	39, 209, 233, 649
Sau3AI	GATC	3 cut(s)	222, 325, 447
SchI	GAGTC	2 cut(s)	44, 638
ScrFI	CCNGG	3 cut(s)	114, 177, 665
SduI	GDGCHC	1 cut(s)	268
SetI	ASST	8 cut(s)	156, 181, 274, 602, 661, 672, 708, 723
SfaNI	GCATC	2 cut(s)	220, 685
SfcI	CTRYAG	2 cut(s)	39, 206
Sfr274I	CTCGAG	1 cut(s)	242
SgrAI	CRCCGGYG	1 cut(s)	22
SlaI	CTCGAG	1 cut(s)	242
SmlI	CTYRAG	2 cut(s)	242, 281
SmoI	CTYRAG	2 cut(s)	242, 281
Sse9I	AATT	6 cut(s)	117, 129, 137, 416, 423, 612
SsiI	CCGC	1 cut(s)	232
SspI	AATATT	1 cut(s)	346
SspMI	CTAG	1 cut(s)	269
StyD4I	CCNGG	3 cut(s)	112, 175, 663
TaaI	ACNGT	3 cut(s)	47, 359, 483
TaqI	TCGA	4 cut(s)	214, 225, 243, 300
TasI	AATT	6 cut(s)	117, 129, 137, 416, 423, 612
TauI	GCSGC	1 cut(s)	235
Tru1I	TTAA	4 cut(s)	282, 294, 498, 593
Tru9I	TTAA	4 cut(s)	282, 294, 498, 593
TscAI	CASTG	1 cut(s)	463
TseFI	GTSAC	1 cut(s)	47
TseI	GCWGC	3 cut(s)	38, 208, 648
Tsp45I	GTSAC	1 cut(s)	47
TspDTI	ATGAA	2 cut(s)	341, 429
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	1 cut(s)	463
Vha464I	CTTAAG	1 cut(s)	281
XapI	RAATTY	3 cut(s)	129, 137, 416
XhoI	CTCGAG	1 cut(s)	242
XspI	CTAG	1 cut(s)	269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.