RLG00000024806

Protein-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0005150
Physical Location & Seq
Reverse (-)
39244810 .. 39247465
2656 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024806

Sequence Viewer

Length: 768 bp
ATGGATATAGCTCTCTTTTCCCCATCTTCCCTTTTTGCCAACGACGACGACTCTTCCAGTGGTGAGGAAAACACAGAGACCCAGCAAAGCTTCGTAGAGAGGAAGCATCAGTTTCCTGGAATGTTGATCGTTCGAGAATTTTCATTTCATCAGCTGAATGCCAATTTACTCTGGCCGGGGACATTTGCATTTGCAGAATGGTTAATTCAAAACAGGCCATTGATTGAGGGAAGACATTGTATTGAACTGGGCAGTGCTACTGGTGCTTTGGCCATTTTCCTACGAAGATTGTGTAATCTTGACATCACTACATCAGACTATAATGATCAAGAAATTGAAGAGAATATAGCTTACAACTGCAGGGTAAATGGAATTGCACCTGCTCTCCCTCATATAAAGCATACCTGGGGTGACAGCTTCCCCAGTAGGGATCCAGACTGGGACCTAATTATTGCGAGTGATATCTTATTGTATGTGAAACAGTATCCAAATTTGATAAAAACTCTTTTGTTTCTCCTCAAATCTTACAAGCCAAAGGAGAATGAATCACAGCCTCTACCCAAGGATGAGCCAACTGGACAATCTTTCAGTTTACCCCGGCCATCATTTCTGATGAGTTGGAGACGAAGAATTGGAAAAGAGGACGAATCACTGTTTTTCATGGGGTGTGAGGATGCTGGTCTTGAAGTAAAGCATCTGGGAGCCCGGGTGTATTGCATCAAACCTAGAGAAACTACTACAAACGGCGACCAAATAATGAATTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

256

Amino Acids

29.09

Weight (kDa)

5.11

Isoelectric Point (pI)

50.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 54 - 174 2.1e-11 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 388
Acc36I ACCTGC 1 cut(s) 388
AclWI GGATC 2 cut(s) 425, 438
AcoI YGGCCR 3 cut(s) 173, 270, 599
AcsI RAATTY 3 cut(s) 137, 490, 760
AfiI CCNNNNNNNGG 1 cut(s) 427
AgsI TTSAA 4 cut(s) 209, 245, 338, 686
AjnI CCWGG 2 cut(s) 115, 404
AluBI AGCT 5 cut(s) 11, 90, 154, 350, 417
AluI AGCT 5 cut(s) 11, 90, 154, 350, 417
Alw26I GTCTC 2 cut(s) 71, 616
AlwI GGATC 2 cut(s) 425, 438
Ama87I CYCGRG 1 cut(s) 705
AoxI GGCC 4 cut(s) 173, 215, 270, 599
ApoI RAATTY 3 cut(s) 137, 490, 760
AspS9I GGNCC 1 cut(s) 442
AsuC2I CCSGG 4 cut(s) 177, 598, 706, 707
AsuHPI GGTGA 2 cut(s) 74, 422
AvaI CYCGRG 1 cut(s) 705
AvaII GGWCC 1 cut(s) 442
BalI TGGCCA 1 cut(s) 272
BamHI GGATCC 1 cut(s) 430
BanII GRGCYC 1 cut(s) 706
BbsI GAAGAC 1 cut(s) 238
BccI CCATC 2 cut(s) 31, 610
BceAI ACGGC 1 cut(s) 760
BciT130I CCWGG 2 cut(s) 117, 406
BciVI GTATCC 1 cut(s) 495
BclI TGATCA 1 cut(s) 325
BcnI CCSGG 4 cut(s) 177, 598, 706, 707
BcoDI GTCTC 2 cut(s) 71, 616
BfaI CTAG 1 cut(s) 726
BfmI CTRYAG 1 cut(s) 358
BfuAI ACCTGC 1 cut(s) 388
BfuI GTATCC 1 cut(s) 495
Bme1390I CCNGG 6 cut(s) 117, 177, 406, 598, 706, 707
Bme18I GGWCC 1 cut(s) 442
BmeT110I CYCGRG 1 cut(s) 705
BmgT120I GGNCC 1 cut(s) 442
BmiI GGNNCC 3 cut(s) 432, 443, 703
BmrFI CCNGG 6 cut(s) 117, 177, 406, 598, 706, 707
BmrI ACTGGG 3 cut(s) 257, 417, 448
BmsI GCATC 4 cut(s) 115, 664, 703, 726
BmuI ACTGGG 3 cut(s) 257, 417, 448
BpiI GAAGAC 1 cut(s) 238
BpuMI CCSGG 4 cut(s) 177, 598, 706, 707
BsaI GGTCTC 1 cut(s) 71
BsaJI CCNNGG 5 cut(s) 176, 405, 561, 596, 705
BsaXI ACNNNNNCTCC 4 cut(s) 369, 399, 693, 723
Bsc4I CCNNNNNNNGG 1 cut(s) 427
Bse1I ACTGG 6 cut(s) 57, 252, 265, 423, 443, 580
BseBI CCWGG 2 cut(s) 117, 406
BseDI CCNNGG 5 cut(s) 176, 405, 561, 596, 705
BseGI GGATG 2 cut(s) 571, 679
BseLI CCNNNNNNNGG 1 cut(s) 427
BseNI ACTGG 6 cut(s) 57, 252, 265, 423, 443, 580
BseRI GAGGAG 1 cut(s) 506
BseYI CCCAGC 1 cut(s) 81
BshFI GGCC 4 cut(s) 175, 217, 272, 601
BsiHKCI CYCGRG 1 cut(s) 705
BsiSI CCGG 3 cut(s) 176, 598, 706
BslFI GGGAC 2 cut(s) 193, 455
BslI CCNNNNNNNGG 1 cut(s) 427
BsmAI GTCTC 2 cut(s) 71, 616
BsmBI CGTCTC 1 cut(s) 616
BsmFI GGGAC 2 cut(s) 193, 455
BsmI GAATGC 1 cut(s) 163
BsnI GGCC 4 cut(s) 175, 217, 272, 601
Bso31I GGTCTC 1 cut(s) 71
BsoBI CYCGRG 1 cut(s) 705
Bsp1286I GDGCHC 1 cut(s) 706
Bsp143I GATC 3 cut(s) 126, 325, 430
BspANI GGCC 4 cut(s) 175, 217, 272, 601
BspLI GGNNCC 3 cut(s) 432, 443, 703
BspMAI CTGCAG 1 cut(s) 362
BspMI ACCTGC 1 cut(s) 388
BspPI GGATC 2 cut(s) 425, 438
BspTNI GGTCTC 1 cut(s) 71
BsrI ACTGG 6 cut(s) 57, 252, 265, 423, 443, 580
BssECI CCNNGG 5 cut(s) 176, 405, 561, 596, 705
BssMI GATC 3 cut(s) 126, 325, 430
BssT1I CCWWGG 1 cut(s) 561
Bst2UI CCWGG 2 cut(s) 117, 406
Bst4CI ACNGT 2 cut(s) 483, 654
Bst6I CTCTTC 2 cut(s) 58, 333
BstDEI CTNAG 1 cut(s) 765
BstF5I GGATG 2 cut(s) 571, 679
BstKTI GATC 3 cut(s) 129, 328, 433
BstMAI GTCTC 2 cut(s) 71, 616
BstMBI GATC 3 cut(s) 126, 325, 430
BstMWI GCNNNNNNNGC 1 cut(s) 263
BstNI CCWGG 2 cut(s) 117, 406
BstSCI CCNGG 6 cut(s) 115, 175, 404, 596, 704, 705
BstSFI CTRYAG 1 cut(s) 358
BstV2I GAAGAC 1 cut(s) 238
BstX2I RGATCY 1 cut(s) 430
BstYI RGATCY 1 cut(s) 430
BsuI GTATCC 1 cut(s) 495
BsuRI GGCC 4 cut(s) 175, 217, 272, 601
BtsCI GGATG 2 cut(s) 571, 679
BtsI GCAGTG 1 cut(s) 259
BtsIMutI CAGTG 3 cut(s) 64, 259, 650
BveI ACCTGC 1 cut(s) 388
Cfr13I GGNCC 1 cut(s) 442
Cfr9I CCCGGG 1 cut(s) 705
CviAII CATG 1 cut(s) 661
DdeI CTNAG 1 cut(s) 765
DpnI GATC 3 cut(s) 128, 327, 432
DpnII GATC 3 cut(s) 126, 325, 430
EaeI YGGCCR 3 cut(s) 173, 270, 599
Eam1104I CTCTTC 2 cut(s) 58, 333
EarI CTCTTC 2 cut(s) 58, 333
Eco130I CCWWGG 1 cut(s) 561
Eco24I GRGCYC 1 cut(s) 706
Eco31I GGTCTC 1 cut(s) 71
Eco32I GATATC 1 cut(s) 463
Eco47I GGWCC 1 cut(s) 442
Eco88I CYCGRG 1 cut(s) 705
EcoO109I RGGNCCY 1 cut(s) 442
EcoRI GAATTC 1 cut(s) 760
EcoRII CCWGG 2 cut(s) 115, 404
EcoRV GATATC 1 cut(s) 463
EcoT14I CCWWGG 1 cut(s) 561
EcoT38I GRGCYC 1 cut(s) 706
ErhI CCWWGG 1 cut(s) 561
Esp3I CGTCTC 1 cut(s) 616
FaeI CATG 1 cut(s) 664
FaiI YATR 8 cut(s) 8, 321, 347, 393, 395, 402, 474, 662
FaqI GGGAC 2 cut(s) 193, 455
FatI CATG 1 cut(s) 660
FbaI TGATCA 1 cut(s) 325
FokI GGATG 2 cut(s) 578, 686
FriOI GRGCYC 1 cut(s) 706
FspBI CTAG 1 cut(s) 726
GsaI CCCAGC 1 cut(s) 85
HaeIII GGCC 4 cut(s) 175, 217, 272, 601
HapII CCGG 3 cut(s) 176, 598, 706
Hin1II CATG 1 cut(s) 664
HindIII AAGCTT 1 cut(s) 88
HinfI GANTC 3 cut(s) 50, 545, 647
HpaII CCGG 3 cut(s) 176, 598, 706
HphI GGTGA 2 cut(s) 74, 422
Hpy166II GTNNAC 1 cut(s) 593
Hpy188I TCNGA 2 cut(s) 316, 612
Hpy188III TCNNGA 5 cut(s) 134, 299, 329, 434, 683
Hpy8I GTNNAC 1 cut(s) 593
Hpy99I CGWCG 2 cut(s) 47, 50
HpyCH4III ACNGT 2 cut(s) 483, 654
HpyCH4V TGCA 5 cut(s) 188, 194, 360, 377, 717
HpyF10VI GCNNNNNNNGC 1 cut(s) 263
HpyF3I CTNAG 1 cut(s) 765
Hsp92II CATG 1 cut(s) 664
Ksp22I TGATCA 1 cut(s) 325
Kzo9I GATC 3 cut(s) 126, 325, 430
LmnI GCTCC 1 cut(s) 701
LweI GCATC 4 cut(s) 115, 664, 703, 726
MaeI CTAG 1 cut(s) 726
MaeIII GTNAC 1 cut(s) 410
MalI GATC 3 cut(s) 128, 327, 432
MboI GATC 3 cut(s) 126, 325, 430
MboII GAAGA 6 cut(s) 18, 45, 243, 297, 350, 639
MflI RGATCY 1 cut(s) 430
MhlI GDGCHC 1 cut(s) 706
MlsI TGGCCA 1 cut(s) 272
MluCI AATT 9 cut(s) 137, 163, 204, 333, 372, 447, 490, 630, 760
MluNI TGGCCA 1 cut(s) 272
MlyI GAGTC 1 cut(s) 44
MmeI TCCRAC 1 cut(s) 599
MnlI CCTC 8 cut(s) 58, 93, 220, 399, 527, 564, 634, 664
Mox20I TGGCCA 1 cut(s) 272
MscI TGGCCA 1 cut(s) 272
MseI TTAA 1 cut(s) 203
Msp20I TGGCCA 1 cut(s) 272
MspA1I CMGCKG 1 cut(s) 154
MspI CCGG 3 cut(s) 176, 598, 706
MspR9I CCNGG 6 cut(s) 117, 177, 406, 598, 706, 707
Mva1269I GAATGC 1 cut(s) 163
MvaI CCWGG 2 cut(s) 117, 406
MwoI GCNNNNNNNGC 1 cut(s) 263
NciI CCSGG 4 cut(s) 177, 598, 706, 707
NdeII GATC 3 cut(s) 126, 325, 430
NlaIII CATG 1 cut(s) 664
NlaIV GGNNCC 3 cut(s) 432, 443, 703
NmuCI GTSAC 1 cut(s) 410
PaqCI CACCTGC 1 cut(s) 388
PctI GAATGC 1 cut(s) 163
PfeI GAWTC 2 cut(s) 545, 647
PfoI TCCNGGA 1 cut(s) 115
PleI GAGTC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 44
PpuMI RGGWCCY 1 cut(s) 442
Psp5II RGGWCCY 1 cut(s) 442
Psp6I CCWGG 2 cut(s) 115, 404
PspFI CCCAGC 1 cut(s) 81
PspGI CCWGG 2 cut(s) 115, 404
PspN4I GGNNCC 3 cut(s) 432, 443, 703
PspPI GGNCC 1 cut(s) 442
PspPPI RGGWCCY 1 cut(s) 442
PstI CTGCAG 1 cut(s) 362
PsuI RGATCY 1 cut(s) 430
PvuII CAGCTG 1 cut(s) 154
SaqAI TTAA 1 cut(s) 203
Sau3AI GATC 3 cut(s) 126, 325, 430
Sau96I GGNCC 1 cut(s) 442
SchI GAGTC 1 cut(s) 44
ScrFI CCNGG 6 cut(s) 117, 177, 406, 598, 706, 707
SduI GDGCHC 1 cut(s) 706
SetI ASST 9 cut(s) 13, 92, 156, 352, 382, 407, 419, 447, 727
SfaNI GCATC 4 cut(s) 115, 664, 703, 726
SfcI CTRYAG 1 cut(s) 358
SinI GGWCC 1 cut(s) 442
SmaI CCCGGG 1 cut(s) 707
Sse9I AATT 9 cut(s) 137, 163, 204, 333, 372, 447, 490, 630, 760
SspMI CTAG 1 cut(s) 726
StyD4I CCNGG 6 cut(s) 115, 175, 404, 596, 704, 705
StyI CCWWGG 1 cut(s) 561
TaaI ACNGT 2 cut(s) 483, 654
TaqI TCGA 1 cut(s) 133
TasI AATT 9 cut(s) 137, 163, 204, 333, 372, 447, 490, 630, 760
TfiI GAWTC 2 cut(s) 545, 647
Tru1I TTAA 1 cut(s) 203
Tru9I TTAA 1 cut(s) 203
TscAI CASTG 3 cut(s) 64, 259, 657
TseFI GTSAC 1 cut(s) 410
Tsp45I GTSAC 1 cut(s) 410
TspDTI ATGAA 4 cut(s) 132, 137, 558, 649
TspMI CCCGGG 1 cut(s) 705
TspRI CASTG 3 cut(s) 64, 259, 657
VpaK11BI GGWCC 1 cut(s) 442
XapI RAATTY 3 cut(s) 137, 490, 760
XmaI CCCGGG 1 cut(s) 705
XspI CTAG 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.