Rmu_sc0008124.1_g000004

Protein-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008124.1
OG0005150
Physical Location & Seq
Reverse (-)
27698 .. 32303
4606 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008124.1_g000004.1.cds

Sequence Viewer

Length: 813 bp
ctgctgcgggggcacgggctgcaagagttgctgctgcaagggcactggctgcaagagttgctgctgcaagggcactggctgcaagagttgcttggcgggggctgctgtgcgaaggcaacagcagtggctagctgctgctggggggtcgtgcaaggatggcaggcgcacgggtgcgctgggcaaggctgcaggactgtgagctgcagcgcggggggggcagcaaccgagctaggcagggtggtgaggcttgcggcagaagttgagcagcagcaaggacttggtgctgcagtgaagttgtgtggtactggtgctttggccattttcctacgaagattgtgtaatcttgacatcactacatcagactataatgatcaagaaattgaagagaatatagcttacaactgcagggtaaatggaattgcacctgctctccctcatataaagcatacctggggtgacagcttccccaatagggatccagactgggacctaattattgcgagtgatatcttattgtatgtgaaacagtatccaaatttgataaaaactctttcgtttctcctcacatcttacaagccaaaggagaatgaatcacagcctcgacccaaggatgagccaactggacaatctttcagtttacctcggccgtcatttctgatgagttggagacgaagaattggaaaagaggacgaatcactgttcttcacggggtgtgaggatgctggtcttgaagtaaagcatctgggatcccgggtgtattgcatcaaacctagagaaactactacaaacggcgaccaaatagtgaattcttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

270

Amino Acids

29.72

Weight (kDa)

6.19

Isoelectric Point (pI)

47.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 433
Acc36I ACCTGC 1 cut(s) 433
AccII CGCG 1 cut(s) 209
AciI CCGC 4 cut(s) 7, 96, 209, 251
AclWI GGATC 4 cut(s) 470, 483, 741, 754
AcoI YGGCCR 2 cut(s) 315, 644
AcsI RAATTY 2 cut(s) 535, 805
AdeI CACNNNGTG 1 cut(s) 711
AfaI GTAC 1 cut(s) 304
AfiI CCNNNNNNNGG 1 cut(s) 472
AgsI TTSAA 2 cut(s) 383, 731
AjnI CCWGG 1 cut(s) 449
AluBI AGCT 5 cut(s) 132, 201, 229, 395, 462
AluI AGCT 5 cut(s) 132, 201, 229, 395, 462
Alw26I GTCTC 1 cut(s) 661
AlwI GGATC 4 cut(s) 470, 483, 741, 754
Ama87I CYCGRG 1 cut(s) 750
AoxI GGCC 2 cut(s) 315, 644
ApoI RAATTY 2 cut(s) 535, 805
AspLEI GCGC 3 cut(s) 166, 176, 209
AspS9I GGNCC 1 cut(s) 487
AsuC2I CCSGG 2 cut(s) 751, 752
AsuHPI GGTGA 2 cut(s) 253, 467
AsuNHI GCTAGC 1 cut(s) 128
AvaI CYCGRG 1 cut(s) 750
AvaII GGWCC 1 cut(s) 487
BaeGI GKGCMC 3 cut(s) 15, 45, 75
BalI TGGCCA 1 cut(s) 317
BamHI GGATCC 2 cut(s) 475, 746
BccI CCATC 1 cut(s) 150
BceAI ACGGC 2 cut(s) 631, 805
BciT130I CCWGG 1 cut(s) 451
BciVI GTATCC 1 cut(s) 540
BclI TGATCA 1 cut(s) 370
BcnI CCSGG 2 cut(s) 751, 752
BcoDI GTCTC 1 cut(s) 661
BfaI CTAG 3 cut(s) 129, 230, 771
BfmI CTRYAG 4 cut(s) 187, 202, 285, 403
BfuAI ACCTGC 1 cut(s) 433
BfuI GTATCC 1 cut(s) 540
Bme1390I CCNGG 3 cut(s) 451, 751, 752
Bme18I GGWCC 1 cut(s) 487
BmeT110I CYCGRG 1 cut(s) 750
BmgT120I GGNCC 1 cut(s) 487
BmiI GGNNCC 3 cut(s) 477, 488, 748
BmrFI CCNGG 3 cut(s) 451, 751, 752
BmrI ACTGGG 1 cut(s) 493
BmsI GCATC 3 cut(s) 709, 748, 771
BmtI GCTAGC 1 cut(s) 132
BmuI ACTGGG 1 cut(s) 493
BpuMI CCSGG 2 cut(s) 751, 752
BsaJI CCNNGG 4 cut(s) 450, 606, 641, 750
BsaXI ACNNNNNCTCC 2 cut(s) 414, 444
Bsc4I CCNNNNNNNGG 1 cut(s) 472
Bse1I ACTGG 5 cut(s) 50, 80, 310, 488, 625
BseBI CCWGG 1 cut(s) 451
BseDI CCNNGG 4 cut(s) 450, 606, 641, 750
BseGI GGATG 3 cut(s) 161, 616, 724
BseLI CCNNNNNNNGG 1 cut(s) 472
BseNI ACTGG 5 cut(s) 50, 80, 310, 488, 625
BseRI GAGGAG 1 cut(s) 551
BseSI GKGCMC 3 cut(s) 15, 45, 75
BseX3I CGGCCG 1 cut(s) 644
BseYI CCCAGC 2 cut(s) 138, 176
Bsh1236I CGCG 1 cut(s) 209
Bsh1285I CGRYCG 1 cut(s) 647
BshFI GGCC 2 cut(s) 317, 646
BsiEI CGRYCG 1 cut(s) 647
BsiHKCI CYCGRG 1 cut(s) 750
BsiSI CCGG 1 cut(s) 751
BslFI GGGAC 1 cut(s) 500
BslI CCNNNNNNNGG 1 cut(s) 472
BsmAI GTCTC 1 cut(s) 661
BsmBI CGTCTC 1 cut(s) 661
BsmFI GGGAC 1 cut(s) 500
BsnI GGCC 2 cut(s) 317, 646
BsoBI CYCGRG 1 cut(s) 750
Bsp1286I GDGCHC 3 cut(s) 15, 45, 75
Bsp143I GATC 3 cut(s) 370, 475, 746
BspACI CCGC 4 cut(s) 7, 96, 209, 251
BspANI GGCC 2 cut(s) 317, 646
BspFNI CGCG 1 cut(s) 209
BspLI GGNNCC 3 cut(s) 477, 488, 748
BspMAI CTGCAG 4 cut(s) 191, 206, 289, 407
BspMI ACCTGC 1 cut(s) 433
BspOI GCTAGC 1 cut(s) 132
BspPI GGATC 4 cut(s) 470, 483, 741, 754
BsrI ACTGG 5 cut(s) 50, 80, 310, 488, 625
BssECI CCNNGG 4 cut(s) 450, 606, 641, 750
BssMI GATC 3 cut(s) 370, 475, 746
BssT1I CCWWGG 1 cut(s) 606
Bst2UI CCWGG 1 cut(s) 451
Bst4CI ACNGT 3 cut(s) 196, 528, 699
Bst6I CTCTTC 1 cut(s) 378
BstAPI GCANNNNNTGC 6 cut(s) 19, 28, 49, 58, 79, 88
BstC8I GCNNGC 3 cut(s) 130, 162, 249
BstDEI CTNAG 1 cut(s) 810
BstF5I GGATG 3 cut(s) 161, 616, 724
BstFNI CGCG 1 cut(s) 209
BstHHI GCGC 3 cut(s) 166, 176, 209
BstKTI GATC 3 cut(s) 373, 478, 749
BstMAI GTCTC 1 cut(s) 661
BstMBI GATC 3 cut(s) 370, 475, 746
BstMCI CGRYCG 1 cut(s) 647
BstNI CCWGG 1 cut(s) 451
BstSCI CCNGG 3 cut(s) 449, 749, 750
BstSFI CTRYAG 4 cut(s) 187, 202, 285, 403
BstSLI GKGCMC 3 cut(s) 15, 45, 75
BstUI CGCG 1 cut(s) 209
BstX2I RGATCY 2 cut(s) 475, 746
BstYI RGATCY 2 cut(s) 475, 746
BstZI CGGCCG 1 cut(s) 644
BsuI GTATCC 1 cut(s) 540
BsuRI GGCC 2 cut(s) 317, 646
BtsCI GGATG 3 cut(s) 161, 616, 724
BtsI GCAGTG 2 cut(s) 129, 294
BtsIMutI CAGTG 5 cut(s) 43, 73, 129, 294, 695
BveI ACCTGC 1 cut(s) 433
Cac8I GCNNGC 3 cut(s) 130, 162, 249
CfoI GCGC 3 cut(s) 166, 176, 209
Cfr13I GGNCC 1 cut(s) 487
Cfr9I CCCGGG 1 cut(s) 750
Csp6I GTAC 1 cut(s) 303
CspCI CAANNNNNGTGG 2 cut(s) 105, 140
CviQI GTAC 1 cut(s) 303
DdeI CTNAG 1 cut(s) 810
DpnI GATC 3 cut(s) 372, 477, 748
DpnII GATC 3 cut(s) 370, 475, 746
DraIII CACNNNGTG 1 cut(s) 711
EaeI YGGCCR 2 cut(s) 315, 644
EagI CGGCCG 1 cut(s) 644
Eam1104I CTCTTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 378
EclXI CGGCCG 1 cut(s) 644
Eco130I CCWWGG 1 cut(s) 606
Eco32I GATATC 1 cut(s) 508
Eco47I GGWCC 1 cut(s) 487
Eco52I CGGCCG 1 cut(s) 644
Eco88I CYCGRG 1 cut(s) 750
EcoO109I RGGNCCY 1 cut(s) 487
EcoRI GAATTC 1 cut(s) 805
EcoRII CCWGG 1 cut(s) 449
EcoRV GATATC 1 cut(s) 508
EcoT14I CCWWGG 1 cut(s) 606
ErhI CCWWGG 1 cut(s) 606
Esp3I CGTCTC 1 cut(s) 661
FaiI YATR 6 cut(s) 366, 392, 438, 440, 447, 519
FalI AAGNNNNNCTT 2 cut(s) 75, 107
FaqI GGGAC 1 cut(s) 500
FauI CCCGC 2 cut(s) 89, 202
FbaI TGATCA 1 cut(s) 370
FokI GGATG 3 cut(s) 168, 623, 731
FspBI CTAG 3 cut(s) 129, 230, 771
GlaI GCGC 3 cut(s) 165, 175, 208
GsaI CCCAGC 2 cut(s) 142, 180
HaeIII GGCC 2 cut(s) 317, 646
HapII CCGG 1 cut(s) 751
HhaI GCGC 3 cut(s) 166, 176, 209
Hin6I GCGC 3 cut(s) 164, 174, 207
HinP1I GCGC 3 cut(s) 164, 174, 207
HinfI GANTC 2 cut(s) 590, 692
HpaII CCGG 1 cut(s) 751
HphI GGTGA 2 cut(s) 253, 467
Hpy166II GTNNAC 1 cut(s) 638
Hpy188I TCNGA 2 cut(s) 361, 657
Hpy188III TCNNGA 4 cut(s) 344, 374, 479, 728
Hpy8I GTNNAC 1 cut(s) 638
HpyAV CCTTC 1 cut(s) 106
HpyCH4III ACNGT 3 cut(s) 196, 528, 699
HpyF3I CTNAG 1 cut(s) 810
HspAI GCGC 3 cut(s) 164, 174, 207
Ksp22I TGATCA 1 cut(s) 370
Kzo9I GATC 3 cut(s) 370, 475, 746
LweI GCATC 3 cut(s) 709, 748, 771
MaeI CTAG 3 cut(s) 129, 230, 771
MaeIII GTNAC 1 cut(s) 455
MalI GATC 3 cut(s) 372, 477, 748
MboI GATC 3 cut(s) 370, 475, 746
MboII GAAGA 4 cut(s) 342, 395, 684, 694
MflI RGATCY 2 cut(s) 475, 746
MhlI GDGCHC 3 cut(s) 15, 45, 75
MlsI TGGCCA 1 cut(s) 317
MluCI AATT 6 cut(s) 378, 417, 492, 535, 675, 805
MluNI TGGCCA 1 cut(s) 317
MmeI TCCRAC 1 cut(s) 644
MnlI CCTC 7 cut(s) 237, 444, 572, 609, 651, 679, 709
Mox20I TGGCCA 1 cut(s) 317
MscI TGGCCA 1 cut(s) 317
Msp20I TGGCCA 1 cut(s) 317
MspI CCGG 1 cut(s) 751
MspR9I CCNGG 3 cut(s) 451, 751, 752
MvaI CCWGG 1 cut(s) 451
MvnI CGCG 1 cut(s) 209
NciI CCSGG 2 cut(s) 751, 752
NdeII GATC 3 cut(s) 370, 475, 746
NheI GCTAGC 1 cut(s) 128
NlaIV GGNNCC 3 cut(s) 477, 488, 748
NmeAIII GCCGAG 1 cut(s) 622
NmuCI GTSAC 1 cut(s) 455
PaqCI CACCTGC 1 cut(s) 433
PfeI GAWTC 2 cut(s) 590, 692
PpuMI RGGWCCY 1 cut(s) 487
Psp5II RGGWCCY 1 cut(s) 487
Psp6I CCWGG 1 cut(s) 449
PspFI CCCAGC 2 cut(s) 138, 176
PspGI CCWGG 1 cut(s) 449
PspN4I GGNNCC 3 cut(s) 477, 488, 748
PspPI GGNCC 1 cut(s) 487
PspPPI RGGWCCY 1 cut(s) 487
PstI CTGCAG 4 cut(s) 191, 206, 289, 407
PsuI RGATCY 2 cut(s) 475, 746
RsaI GTAC 1 cut(s) 304
RsaNI GTAC 1 cut(s) 303
Sau3AI GATC 3 cut(s) 370, 475, 746
Sau96I GGNCC 1 cut(s) 487
ScrFI CCNGG 3 cut(s) 451, 751, 752
SduI GDGCHC 3 cut(s) 15, 45, 75
SfaNI GCATC 3 cut(s) 709, 748, 771
SfcI CTRYAG 4 cut(s) 187, 202, 285, 403
SinI GGWCC 1 cut(s) 487
SmaI CCCGGG 1 cut(s) 752
Sse9I AATT 6 cut(s) 378, 417, 492, 535, 675, 805
SsiI CCGC 4 cut(s) 7, 96, 209, 251
SspMI CTAG 3 cut(s) 129, 230, 771
StyD4I CCNGG 3 cut(s) 449, 749, 750
StyI CCWWGG 1 cut(s) 606
TaaI ACNGT 3 cut(s) 196, 528, 699
TaqI TCGA 1 cut(s) 601
TasI AATT 6 cut(s) 378, 417, 492, 535, 675, 805
TauI GCSGC 1 cut(s) 254
TfiI GAWTC 2 cut(s) 590, 692
TscAI CASTG 5 cut(s) 50, 80, 129, 294, 702
TseFI GTSAC 1 cut(s) 455
Tsp45I GTSAC 1 cut(s) 455
TspDTI ATGAA 1 cut(s) 603
TspMI CCCGGG 1 cut(s) 750
TspRI CASTG 5 cut(s) 50, 80, 129, 294, 702
VpaK11BI GGWCC 1 cut(s) 487
XapI RAATTY 2 cut(s) 535, 805
XmaI CCCGGG 1 cut(s) 750
XspI CTAG 3 cut(s) 129, 230, 771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.