Rh3BG124600

Protein-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0005150
Physical Location & Seq
Forward (+)
10239833 .. 10242131
2299 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG124600.1

Sequence Viewer

Length: 654 bp
ATGGACATAGCTCTCTTTTCCCCATCTTCCCTTTTTGCCAACGACGACGACTCTTCCAGTGTAATTAAACTGCTTGGAATATATTTTGAGTTTGATAGTTTATTAGTCAATTTTGCTGATGTTAATTTACTTACTGGCAGTGGTACTGGTGCTTTGGCCATTTTCCTACGAAGATTGTGTAATCTTGACATCACTACATCAGACTATAATGATCAAGAAATTGAAGAGAATATAGCTTACAACTGCAGGGTAAATGGAATTGCACCTGCTCTCCCTCATATAAAGCATACCTGGGGTGACAGCTTCCCCAATAGGGATCCAGACTGGGACCTAATTATTGCAAGTGATATCTTATTGTATGTGAAACAGTATCCAAATTTGATAAAAACTCTTTCGTTTCTCCTCACATCTTACAAGCCAAGGGAGAATGAATCACAGCCTCGACCCAAGGATGAGCCAACTGGACAATCTTTCAGTTTACCTCGGCCGTCATTTCTGATGAGTTGGAGACGAAGAATTGGAAAAGAGGACGAATCACTGTTCTTCACGGGGTGTGAGGATGCTGGTCTTGAAGTAAAGCATCTGGGATCCCGGGTGTATTGCATCAAACCTAGAGAAACTACTACAAACGGCAACCAAATAGTGAATTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

217

Amino Acids

24.48

Weight (kDa)

4.91

Isoelectric Point (pI)

42.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 45 - 136 5.9e-09 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
Acc36I ACCTGC 1 cut(s) 274
AclWI GGATC 4 cut(s) 311, 324, 582, 595
AcoI YGGCCR 2 cut(s) 156, 485
AcsI RAATTY 2 cut(s) 376, 646
AdeI CACNNNGTG 1 cut(s) 552
AfaI GTAC 1 cut(s) 145
AfiI CCNNNNNNNGG 1 cut(s) 313
AgsI TTSAA 2 cut(s) 224, 572
AjnI CCWGG 1 cut(s) 290
AluBI AGCT 3 cut(s) 11, 236, 303
AluI AGCT 3 cut(s) 11, 236, 303
Alw26I GTCTC 1 cut(s) 502
AlwI GGATC 4 cut(s) 311, 324, 582, 595
Ama87I CYCGRG 1 cut(s) 591
AoxI GGCC 2 cut(s) 156, 485
ApoI RAATTY 2 cut(s) 376, 646
AspS9I GGNCC 1 cut(s) 328
AsuC2I CCSGG 2 cut(s) 592, 593
AsuHPI GGTGA 1 cut(s) 308
AvaI CYCGRG 1 cut(s) 591
AvaII GGWCC 1 cut(s) 328
BalI TGGCCA 1 cut(s) 158
BamHI GGATCC 2 cut(s) 316, 587
BccI CCATC 1 cut(s) 31
BceAI ACGGC 2 cut(s) 472, 646
BciT130I CCWGG 1 cut(s) 292
BciVI GTATCC 1 cut(s) 381
BclI TGATCA 1 cut(s) 211
BcnI CCSGG 2 cut(s) 592, 593
BcoDI GTCTC 1 cut(s) 502
BfaI CTAG 1 cut(s) 612
BfmI CTRYAG 1 cut(s) 244
BfuAI ACCTGC 1 cut(s) 274
BfuI GTATCC 1 cut(s) 381
Bme1390I CCNGG 3 cut(s) 292, 592, 593
Bme18I GGWCC 1 cut(s) 328
BmeT110I CYCGRG 1 cut(s) 591
BmgT120I GGNCC 1 cut(s) 328
BmiI GGNNCC 3 cut(s) 318, 329, 589
BmrFI CCNGG 3 cut(s) 292, 592, 593
BmrI ACTGGG 1 cut(s) 334
BmsI GCATC 3 cut(s) 550, 589, 612
BmuI ACTGGG 1 cut(s) 334
BpuMI CCSGG 2 cut(s) 592, 593
BsaJI CCNNGG 5 cut(s) 291, 419, 447, 482, 591
BsaXI ACNNNNNCTCC 2 cut(s) 255, 285
Bsc4I CCNNNNNNNGG 1 cut(s) 313
Bse1I ACTGG 5 cut(s) 57, 139, 151, 329, 466
BseBI CCWGG 1 cut(s) 292
BseDI CCNNGG 5 cut(s) 291, 419, 447, 482, 591
BseGI GGATG 2 cut(s) 457, 565
BseLI CCNNNNNNNGG 1 cut(s) 313
BseNI ACTGG 5 cut(s) 57, 139, 151, 329, 466
BseRI GAGGAG 1 cut(s) 392
BseX3I CGGCCG 1 cut(s) 485
Bsh1285I CGRYCG 1 cut(s) 488
BshFI GGCC 2 cut(s) 158, 487
BsiEI CGRYCG 1 cut(s) 488
BsiHKCI CYCGRG 1 cut(s) 591
BsiSI CCGG 1 cut(s) 592
BslFI GGGAC 1 cut(s) 341
BslI CCNNNNNNNGG 1 cut(s) 313
BsmAI GTCTC 1 cut(s) 502
BsmBI CGTCTC 1 cut(s) 502
BsmFI GGGAC 1 cut(s) 341
BsnI GGCC 2 cut(s) 158, 487
BsoBI CYCGRG 1 cut(s) 591
Bsp143I GATC 3 cut(s) 211, 316, 587
BspANI GGCC 2 cut(s) 158, 487
BspLI GGNNCC 3 cut(s) 318, 329, 589
BspMAI CTGCAG 1 cut(s) 248
BspMI ACCTGC 1 cut(s) 274
BspPI GGATC 4 cut(s) 311, 324, 582, 595
BsrI ACTGG 5 cut(s) 57, 139, 151, 329, 466
BssECI CCNNGG 5 cut(s) 291, 419, 447, 482, 591
BssMI GATC 3 cut(s) 211, 316, 587
BssT1I CCWWGG 2 cut(s) 419, 447
Bst2UI CCWGG 1 cut(s) 292
Bst4CI ACNGT 2 cut(s) 369, 540
Bst6I CTCTTC 2 cut(s) 58, 219
BstDEI CTNAG 1 cut(s) 651
BstF5I GGATG 2 cut(s) 457, 565
BstKTI GATC 3 cut(s) 214, 319, 590
BstMAI GTCTC 1 cut(s) 502
BstMBI GATC 3 cut(s) 211, 316, 587
BstMCI CGRYCG 1 cut(s) 488
BstNI CCWGG 1 cut(s) 292
BstSCI CCNGG 3 cut(s) 290, 590, 591
BstSFI CTRYAG 1 cut(s) 244
BstX2I RGATCY 2 cut(s) 316, 587
BstYI RGATCY 2 cut(s) 316, 587
BstZI CGGCCG 1 cut(s) 485
BsuI GTATCC 1 cut(s) 381
BsuRI GGCC 2 cut(s) 158, 487
BtsCI GGATG 2 cut(s) 457, 565
BtsI GCAGTG 1 cut(s) 145
BtsIMutI CAGTG 3 cut(s) 64, 145, 536
BveI ACCTGC 1 cut(s) 274
Cfr13I GGNCC 1 cut(s) 328
Cfr9I CCCGGG 1 cut(s) 591
Csp6I GTAC 1 cut(s) 144
CviJI RGCY 8 cut(s) 11, 158, 236, 303, 418, 439, 457, 487
CviKI_1 RGCY 8 cut(s) 11, 158, 236, 303, 418, 439, 457, 487
CviQI GTAC 1 cut(s) 144
DdeI CTNAG 1 cut(s) 651
DpnI GATC 3 cut(s) 213, 318, 589
DpnII GATC 3 cut(s) 211, 316, 587
DraIII CACNNNGTG 1 cut(s) 552
EaeI YGGCCR 2 cut(s) 156, 485
EagI CGGCCG 1 cut(s) 485
Eam1104I CTCTTC 2 cut(s) 58, 219
EarI CTCTTC 2 cut(s) 58, 219
EclXI CGGCCG 1 cut(s) 485
Eco130I CCWWGG 2 cut(s) 419, 447
Eco32I GATATC 1 cut(s) 349
Eco47I GGWCC 1 cut(s) 328
Eco52I CGGCCG 1 cut(s) 485
Eco88I CYCGRG 1 cut(s) 591
EcoO109I RGGNCCY 1 cut(s) 328
EcoRI GAATTC 1 cut(s) 646
EcoRII CCWGG 1 cut(s) 290
EcoRV GATATC 1 cut(s) 349
EcoT14I CCWWGG 2 cut(s) 419, 447
ErhI CCWWGG 2 cut(s) 419, 447
Esp3I CGTCTC 1 cut(s) 502
FaiI YATR 8 cut(s) 8, 82, 207, 233, 279, 281, 288, 360
FaqI GGGAC 1 cut(s) 341
FbaI TGATCA 1 cut(s) 211
FokI GGATG 2 cut(s) 464, 572
FspBI CTAG 1 cut(s) 612
HaeIII GGCC 2 cut(s) 158, 487
HapII CCGG 1 cut(s) 592
HinfI GANTC 3 cut(s) 50, 431, 533
HpaII CCGG 1 cut(s) 592
HphI GGTGA 1 cut(s) 308
Hpy166II GTNNAC 1 cut(s) 479
Hpy188I TCNGA 2 cut(s) 202, 498
Hpy188III TCNNGA 4 cut(s) 185, 215, 320, 569
Hpy8I GTNNAC 1 cut(s) 479
Hpy99I CGWCG 2 cut(s) 47, 50
HpyCH4III ACNGT 2 cut(s) 369, 540
HpyCH4V TGCA 4 cut(s) 246, 263, 341, 603
HpyF3I CTNAG 1 cut(s) 651
Ksp22I TGATCA 1 cut(s) 211
Kzo9I GATC 3 cut(s) 211, 316, 587
LweI GCATC 3 cut(s) 550, 589, 612
MaeI CTAG 1 cut(s) 612
MaeIII GTNAC 1 cut(s) 296
MalI GATC 3 cut(s) 213, 318, 589
MboI GATC 3 cut(s) 211, 316, 587
MboII GAAGA 6 cut(s) 18, 45, 183, 236, 525, 535
MflI RGATCY 2 cut(s) 316, 587
MlsI TGGCCA 1 cut(s) 158
MluCI AATT 9 cut(s) 63, 109, 124, 219, 258, 333, 376, 516, 646
MluNI TGGCCA 1 cut(s) 158
MlyI GAGTC 1 cut(s) 44
MmeI TCCRAC 1 cut(s) 485
MnlI CCTC 6 cut(s) 285, 413, 450, 492, 520, 550
Mox20I TGGCCA 1 cut(s) 158
MscI TGGCCA 1 cut(s) 158
MseI TTAA 2 cut(s) 66, 123
Msp20I TGGCCA 1 cut(s) 158
MspI CCGG 1 cut(s) 592
MspR9I CCNGG 3 cut(s) 292, 592, 593
MvaI CCWGG 1 cut(s) 292
NciI CCSGG 2 cut(s) 592, 593
NdeII GATC 3 cut(s) 211, 316, 587
NlaIV GGNNCC 3 cut(s) 318, 329, 589
NmeAIII GCCGAG 1 cut(s) 463
NmuCI GTSAC 1 cut(s) 296
PaqCI CACCTGC 1 cut(s) 274
PfeI GAWTC 2 cut(s) 431, 533
PleI GAGTC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 44
PpuMI RGGWCCY 1 cut(s) 328
Psp5II RGGWCCY 1 cut(s) 328
Psp6I CCWGG 1 cut(s) 290
PspGI CCWGG 1 cut(s) 290
PspN4I GGNNCC 3 cut(s) 318, 329, 589
PspPI GGNCC 1 cut(s) 328
PspPPI RGGWCCY 1 cut(s) 328
PstI CTGCAG 1 cut(s) 248
PsuI RGATCY 2 cut(s) 316, 587
RsaI GTAC 1 cut(s) 145
RsaNI GTAC 1 cut(s) 144
SaqAI TTAA 2 cut(s) 66, 123
Sau3AI GATC 3 cut(s) 211, 316, 587
Sau96I GGNCC 1 cut(s) 328
SchI GAGTC 1 cut(s) 44
ScrFI CCNGG 3 cut(s) 292, 592, 593
SetI ASST 8 cut(s) 13, 238, 268, 293, 305, 333, 484, 613
SfaNI GCATC 3 cut(s) 550, 589, 612
SfcI CTRYAG 1 cut(s) 244
SinI GGWCC 1 cut(s) 328
SmaI CCCGGG 1 cut(s) 593
Sse9I AATT 9 cut(s) 63, 109, 124, 219, 258, 333, 376, 516, 646
SspMI CTAG 1 cut(s) 612
StyD4I CCNGG 3 cut(s) 290, 590, 591
StyI CCWWGG 2 cut(s) 419, 447
TaaI ACNGT 2 cut(s) 369, 540
TaqI TCGA 1 cut(s) 442
TasI AATT 9 cut(s) 63, 109, 124, 219, 258, 333, 376, 516, 646
TfiI GAWTC 2 cut(s) 431, 533
Tru1I TTAA 2 cut(s) 66, 123
Tru9I TTAA 2 cut(s) 66, 123
TscAI CASTG 3 cut(s) 64, 145, 543
TseFI GTSAC 1 cut(s) 296
Tsp45I GTSAC 1 cut(s) 296
TspDTI ATGAA 1 cut(s) 444
TspMI CCCGGG 1 cut(s) 591
TspRI CASTG 3 cut(s) 64, 145, 543
VpaK11BI GGWCC 1 cut(s) 328
XapI RAATTY 2 cut(s) 376, 646
XmaI CCCGGG 1 cut(s) 591
XspI CTAG 1 cut(s) 612
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.