Rh3CG126600

Protein-lysine methyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0005150
Physical Location & Seq
Forward (+)
10326775 .. 10329359
2585 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG126600.1

Sequence Viewer

Length: 789 bp
ATGGACATAGCTCTCTTTTCCCCATCTTCCCTTTTTGCCAACGACGATGACTCTTCCAGTGGTGAGGAAAACACAGAGACCCAGCAAAGCTTCGTAGAGAGGAAGCATCAGTTTCCTGGAATGGAATTGATCGTTCGAGAATTTTCATTTCATCAGCTGAATGCCAATTTACTCTGGCCGGGGACATTTGCATTTGCAGAATGGTTAGTTCAAAACAGGCCATTGATTGAGGGACGGCATTTCAATTTTGCTGATGTTAATTTACTTACTGGCAGTGGTACTGGTGCTTTGGCCATTTTCCTACGAAGATTGTGTAATCTTGACATCACTACATCAGACTATAATGATCAAGAAATTGAAGAGAATATAGCTTACAACTGCAGGGTAAATGGAATTGCACCTGCTCTCCCTCATATAAAGCATACCTGGAGTGACAGCTTCCCCAATAGGGATCCAGACTGGGACCTAATTATTGCGAGTGATATCTTATTGTATGTGAAACAGTATCCAAATTTGATAAAAACTCTTTCGTTTCTCCTCACATCTTACAAGCCAAAGGAGAATGAATCACAGCCTCGACCCAAGGATGAGCCAACTGGACAATCTTTCAGTTTACCTCGGCCGTCATTTCTGATGAGTTGGAGACGAAGAATTGGAAAAGAGGACGAATCACTGTTCTTCACGGGGTGTGAGGATGCTGGTCTTGAAGTAAAGCATCTGGGATCCCGGGTGTATTGCATCAAACCTAGAGAAACTACTACAAACGGCAACCAAATAGTGAATTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Methyltransf_16

Protein Analysis

262

Amino Acids

29.87

Weight (kDa)

5.11

Isoelectric Point (pI)

45.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_16 PF10294 54 - 181 7e-10 Lysine methyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 409
Acc36I ACCTGC 1 cut(s) 409
AclWI GGATC 4 cut(s) 446, 459, 717, 730
AcoI YGGCCR 3 cut(s) 176, 291, 620
AcsI RAATTY 3 cut(s) 140, 511, 781
AdeI CACNNNGTG 1 cut(s) 687
AfaI GTAC 1 cut(s) 280
AfiI CCNNNNNNNGG 1 cut(s) 448
AgsI TTSAA 4 cut(s) 212, 244, 359, 707
AjnI CCWGG 2 cut(s) 115, 425
AluBI AGCT 5 cut(s) 11, 90, 157, 371, 438
AluI AGCT 5 cut(s) 11, 90, 157, 371, 438
Alw26I GTCTC 2 cut(s) 71, 637
AlwI GGATC 4 cut(s) 446, 459, 717, 730
Ama87I CYCGRG 1 cut(s) 726
AoxI GGCC 4 cut(s) 176, 218, 291, 620
ApoI RAATTY 3 cut(s) 140, 511, 781
AspS9I GGNCC 1 cut(s) 463
AsuC2I CCSGG 3 cut(s) 180, 727, 728
AsuHPI GGTGA 1 cut(s) 74
AvaI CYCGRG 1 cut(s) 726
AvaII GGWCC 1 cut(s) 463
BalI TGGCCA 1 cut(s) 293
BamHI GGATCC 2 cut(s) 451, 722
BccI CCATC 1 cut(s) 31
BceAI ACGGC 3 cut(s) 251, 607, 781
BciT130I CCWGG 2 cut(s) 117, 427
BciVI GTATCC 1 cut(s) 516
BclI TGATCA 1 cut(s) 346
BcnI CCSGG 3 cut(s) 180, 727, 728
BcoDI GTCTC 2 cut(s) 71, 637
BfaI CTAG 1 cut(s) 747
BfmI CTRYAG 1 cut(s) 379
BfuAI ACCTGC 1 cut(s) 409
BfuI GTATCC 1 cut(s) 516
Bme1390I CCNGG 5 cut(s) 117, 180, 427, 727, 728
Bme18I GGWCC 1 cut(s) 463
BmeT110I CYCGRG 1 cut(s) 726
BmgT120I GGNCC 1 cut(s) 463
BmiI GGNNCC 3 cut(s) 453, 464, 724
BmrFI CCNGG 5 cut(s) 117, 180, 427, 727, 728
BmrI ACTGGG 1 cut(s) 469
BmsI GCATC 4 cut(s) 115, 685, 724, 747
BmuI ACTGGG 1 cut(s) 469
BpmI CTGGAG 1 cut(s) 448
BpuMI CCSGG 3 cut(s) 180, 727, 728
BsaI GGTCTC 1 cut(s) 71
BsaJI CCNNGG 4 cut(s) 179, 582, 617, 726
BsaXI ACNNNNNCTCC 2 cut(s) 390, 420
Bsc4I CCNNNNNNNGG 1 cut(s) 448
Bse1I ACTGG 5 cut(s) 57, 274, 286, 464, 601
BseBI CCWGG 2 cut(s) 117, 427
BseDI CCNNGG 4 cut(s) 179, 582, 617, 726
BseGI GGATG 2 cut(s) 592, 700
BseLI CCNNNNNNNGG 1 cut(s) 448
BseNI ACTGG 5 cut(s) 57, 274, 286, 464, 601
BseRI GAGGAG 1 cut(s) 527
BseX3I CGGCCG 1 cut(s) 620
BseYI CCCAGC 1 cut(s) 81
Bsh1285I CGRYCG 1 cut(s) 623
BshFI GGCC 4 cut(s) 178, 220, 293, 622
BsiEI CGRYCG 1 cut(s) 623
BsiHKCI CYCGRG 1 cut(s) 726
BsiSI CCGG 2 cut(s) 179, 727
BslFI GGGAC 3 cut(s) 196, 246, 476
BslI CCNNNNNNNGG 1 cut(s) 448
BsmAI GTCTC 2 cut(s) 71, 637
BsmBI CGTCTC 1 cut(s) 637
BsmFI GGGAC 3 cut(s) 196, 246, 476
BsmI GAATGC 1 cut(s) 166
BsnI GGCC 4 cut(s) 178, 220, 293, 622
Bso31I GGTCTC 1 cut(s) 71
BsoBI CYCGRG 1 cut(s) 726
Bsp143I GATC 4 cut(s) 129, 346, 451, 722
BspANI GGCC 4 cut(s) 178, 220, 293, 622
BspLI GGNNCC 3 cut(s) 453, 464, 724
BspMAI CTGCAG 1 cut(s) 383
BspMI ACCTGC 1 cut(s) 409
BspPI GGATC 4 cut(s) 446, 459, 717, 730
BspTNI GGTCTC 1 cut(s) 71
BsrI ACTGG 5 cut(s) 57, 274, 286, 464, 601
BssECI CCNNGG 4 cut(s) 179, 582, 617, 726
BssMI GATC 4 cut(s) 129, 346, 451, 722
BssT1I CCWWGG 1 cut(s) 582
Bst2UI CCWGG 2 cut(s) 117, 427
Bst4CI ACNGT 2 cut(s) 504, 675
Bst6I CTCTTC 2 cut(s) 58, 354
BstDEI CTNAG 1 cut(s) 786
BstF5I GGATG 2 cut(s) 592, 700
BstKTI GATC 4 cut(s) 132, 349, 454, 725
BstMAI GTCTC 2 cut(s) 71, 637
BstMBI GATC 4 cut(s) 129, 346, 451, 722
BstMCI CGRYCG 1 cut(s) 623
BstNI CCWGG 2 cut(s) 117, 427
BstSCI CCNGG 5 cut(s) 115, 178, 425, 725, 726
BstSFI CTRYAG 1 cut(s) 379
BstX2I RGATCY 2 cut(s) 451, 722
BstYI RGATCY 2 cut(s) 451, 722
BstZI CGGCCG 1 cut(s) 620
BsuI GTATCC 1 cut(s) 516
BsuRI GGCC 4 cut(s) 178, 220, 293, 622
BtsCI GGATG 2 cut(s) 592, 700
BtsI GCAGTG 1 cut(s) 280
BtsIMutI CAGTG 3 cut(s) 64, 280, 671
BveI ACCTGC 1 cut(s) 409
Cfr13I GGNCC 1 cut(s) 463
Cfr9I CCCGGG 1 cut(s) 726
Csp6I GTAC 1 cut(s) 279
CviQI GTAC 1 cut(s) 279
DdeI CTNAG 1 cut(s) 786
DpnI GATC 4 cut(s) 131, 348, 453, 724
DpnII GATC 4 cut(s) 129, 346, 451, 722
DraIII CACNNNGTG 1 cut(s) 687
EaeI YGGCCR 3 cut(s) 176, 291, 620
EagI CGGCCG 1 cut(s) 620
Eam1104I CTCTTC 2 cut(s) 58, 354
EarI CTCTTC 2 cut(s) 58, 354
EclXI CGGCCG 1 cut(s) 620
Eco130I CCWWGG 1 cut(s) 582
Eco31I GGTCTC 1 cut(s) 71
Eco32I GATATC 1 cut(s) 484
Eco47I GGWCC 1 cut(s) 463
Eco52I CGGCCG 1 cut(s) 620
Eco88I CYCGRG 1 cut(s) 726
EcoO109I RGGNCCY 1 cut(s) 463
EcoRI GAATTC 1 cut(s) 781
EcoRII CCWGG 2 cut(s) 115, 425
EcoRV GATATC 1 cut(s) 484
EcoT14I CCWWGG 1 cut(s) 582
ErhI CCWWGG 1 cut(s) 582
Esp3I CGTCTC 1 cut(s) 637
FaiI YATR 7 cut(s) 8, 342, 368, 414, 416, 423, 495
FaqI GGGAC 3 cut(s) 196, 246, 476
FbaI TGATCA 1 cut(s) 346
FokI GGATG 2 cut(s) 599, 707
FspBI CTAG 1 cut(s) 747
GsaI CCCAGC 1 cut(s) 85
GsuI CTGGAG 1 cut(s) 448
HaeIII GGCC 4 cut(s) 178, 220, 293, 622
HapII CCGG 2 cut(s) 179, 727
HindIII AAGCTT 1 cut(s) 88
HinfI GANTC 3 cut(s) 50, 566, 668
HpaII CCGG 2 cut(s) 179, 727
HphI GGTGA 1 cut(s) 74
Hpy166II GTNNAC 1 cut(s) 614
Hpy188I TCNGA 2 cut(s) 337, 633
Hpy188III TCNNGA 5 cut(s) 137, 320, 350, 455, 704
Hpy8I GTNNAC 1 cut(s) 614
Hpy99I CGWCG 1 cut(s) 47
HpyCH4III ACNGT 2 cut(s) 504, 675
HpyCH4V TGCA 5 cut(s) 191, 197, 381, 398, 738
HpyF3I CTNAG 1 cut(s) 786
Ksp22I TGATCA 1 cut(s) 346
Kzo9I GATC 4 cut(s) 129, 346, 451, 722
LweI GCATC 4 cut(s) 115, 685, 724, 747
MaeI CTAG 1 cut(s) 747
MaeIII GTNAC 1 cut(s) 431
MalI GATC 4 cut(s) 131, 348, 453, 724
MboI GATC 4 cut(s) 129, 346, 451, 722
MboII GAAGA 6 cut(s) 18, 45, 318, 371, 660, 670
MflI RGATCY 2 cut(s) 451, 722
MlsI TGGCCA 1 cut(s) 293
MluNI TGGCCA 1 cut(s) 293
MlyI GAGTC 1 cut(s) 44
MmeI TCCRAC 1 cut(s) 620
MnlI CCTC 9 cut(s) 58, 93, 223, 420, 548, 585, 627, 655, 685
Mox20I TGGCCA 1 cut(s) 293
MscI TGGCCA 1 cut(s) 293
MseI TTAA 1 cut(s) 258
Msp20I TGGCCA 1 cut(s) 293
MspA1I CMGCKG 1 cut(s) 157
MspI CCGG 2 cut(s) 179, 727
MspR9I CCNGG 5 cut(s) 117, 180, 427, 727, 728
Mva1269I GAATGC 1 cut(s) 166
MvaI CCWGG 2 cut(s) 117, 427
NciI CCSGG 3 cut(s) 180, 727, 728
NdeII GATC 4 cut(s) 129, 346, 451, 722
NlaIV GGNNCC 3 cut(s) 453, 464, 724
NmeAIII GCCGAG 1 cut(s) 598
NmuCI GTSAC 1 cut(s) 431
PaqCI CACCTGC 1 cut(s) 409
PctI GAATGC 1 cut(s) 166
PfeI GAWTC 2 cut(s) 566, 668
PfoI TCCNGGA 1 cut(s) 115
PleI GAGTC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 44
PpuMI RGGWCCY 1 cut(s) 463
Psp5II RGGWCCY 1 cut(s) 463
Psp6I CCWGG 2 cut(s) 115, 425
PspFI CCCAGC 1 cut(s) 81
PspGI CCWGG 2 cut(s) 115, 425
PspN4I GGNNCC 3 cut(s) 453, 464, 724
PspPI GGNCC 1 cut(s) 463
PspPPI RGGWCCY 1 cut(s) 463
PstI CTGCAG 1 cut(s) 383
PsuI RGATCY 2 cut(s) 451, 722
PvuII CAGCTG 1 cut(s) 157
RsaI GTAC 1 cut(s) 280
RsaNI GTAC 1 cut(s) 279
SaqAI TTAA 1 cut(s) 258
Sau3AI GATC 4 cut(s) 129, 346, 451, 722
Sau96I GGNCC 1 cut(s) 463
SchI GAGTC 1 cut(s) 44
ScrFI CCNGG 5 cut(s) 117, 180, 427, 727, 728
SfaNI GCATC 4 cut(s) 115, 685, 724, 747
SfcI CTRYAG 1 cut(s) 379
SinI GGWCC 1 cut(s) 463
SmaI CCCGGG 1 cut(s) 728
SspMI CTAG 1 cut(s) 747
StyD4I CCNGG 5 cut(s) 115, 178, 425, 725, 726
StyI CCWWGG 1 cut(s) 582
TaaI ACNGT 2 cut(s) 504, 675
TaqI TCGA 2 cut(s) 136, 577
TfiI GAWTC 2 cut(s) 566, 668
Tru1I TTAA 1 cut(s) 258
Tru9I TTAA 1 cut(s) 258
TscAI CASTG 3 cut(s) 64, 280, 678
TseFI GTSAC 1 cut(s) 431
Tsp45I GTSAC 1 cut(s) 431
TspDTI ATGAA 3 cut(s) 135, 140, 579
TspMI CCCGGG 1 cut(s) 726
TspRI CASTG 3 cut(s) 64, 280, 678
VpaK11BI GGWCC 1 cut(s) 463
XapI RAATTY 3 cut(s) 140, 511, 781
XmaI CCCGGG 1 cut(s) 726
XspI CTAG 1 cut(s) 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.