AT5G03490

UDP-glucoronosyl UDP-glucosyl transferase family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0003168
Physical Location & Seq
Forward (+)
871204 .. 873072
1869 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G03490.1

Sequence Viewer

Length: 1398 bp
ATGACGGAAGTGTTATTGTTGCCGGGAACTAAATCGGAGAATTCAAAACCACCGCACATAGTGGTGTTTCCATTCCCAGCACAAGGCCACTTACTTCCTCTACTTGACTTAACTCACCAACTCTGCCTCCGTGGATTCAACGTCTCCGTCATCGTTACTCCCGGTAACCTTACTTACCTCTCTCCTCTTCTCTCCGCTCATCCCTCCTCCGTCACCTCCGTCGTTTTCCCTTTCCCTCCTCATCCTTCACTCTCTCCCGGCGTCGAAAACGTTAAAGACGTCGGAAATTCAGGAAATCTCCCGATCATGGCTTCTCTTCGTCAGCTACGAGAACCAATCATCAACTGGTTCCAATCTCATCCGAATCCGCCTATCGCTCTCATCTCCGATTTCTTCCTCGGATGGACTCACGATCTCTGCAATCAAATCGGTATCCCCAGATTCGCTTTCTTCTCCATCAGCTTCTTCTTAGTTTCCGTTCTTCAATTTTGCTTCGAGAACATCGATCTAATCAAATCAACGGATCCGATTCATCTCCTTGATCTTCCTCGCGCTCCGATTTTCAAAGAAGAGCATCTTCCGTCTATAGTCCGACGAAGTCTCCAAACTCCGTCACCGGATCTCGAATCAATCAAAGATTTCTCCATGAATTTGTTGAGCTACGGATCTGTTTTCAATTCTTCTGAGATTCTGGAAGATGATTATCTTCAGTACGTGAAACAGAGGATGGGTCATGATCGGGTTTATGTTATTGGCCCGCTTTGTTCAATCGGGTCGGGTCTTAAATCGAATTCGGGTTCTGTAGACCCGAGTTTGCTGAGTTGGTTAGACGGATCCCCAAACGGGTCAGTTCTATACGTTTGTTTCGGAAGTCAAAAGGCGTTGACTAAAGACCAGTGTGATGCTTTGGCTCTAGGCTTAGAGAAAAGCATGACCCGGTTTGTTTGGGTGGTTAAGAAAGATCCGATACCCGACGGGTTTGAGGATCGGGTTTCCGGAAGGGGATTGGTGGTAAGAGGATGGGTCTCCCAGCTGGCGGTGTTGCGACACGTGGCGGTTGGTGGATTTTTGAGCCATTGTGGATGGAACTCAGTGCTTGAAGGGATAACGAGTGGGGCTGTGATCTTGGGCTGGCCCATGGAGGCGGACCAGTTTGTGAACGCGAGGTTGCTTGTGGAGCATTTGGGTGTTGCGGTTAGGGTTTGCGAAGGTGGTGAAACTGTGCCTGACTCGGATGAGTTGGGTCGGGTCATAGCGGAAACGATGGGTGAGGGAGGACGCGAGGTGGCTGCTCGGGCTGAGGAGATACGGCGGAAGACCGAGGCTGCCGTGACGGAGGCAAATGGAAGCTCCGTTGAAAATGTACAAAGACTTGTCAAAGAATTTGAAAAAGTCTAA

Protein Analysis

465

Amino Acids

50.94

Weight (kDa)

5.57

Isoelectric Point (pI)

36.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 278 - 402 1.4e-14 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 282
AccBSI CCGCTC 1 cut(s) 197
AccI GTMKAC 1 cut(s) 804
AccII CGCG 3 cut(s) 552, 1163, 1281
AccIII TCCGGA 1 cut(s) 995
AclI AACGTT 1 cut(s) 270
AclWI GGATC 8 cut(s) 518, 531, 627, 673, 828, 841, 956, 993
AcsI RAATTY 5 cut(s) 40, 286, 649, 790, 1382
AcuI CTGAAG 1 cut(s) 692
AcvI CACGTG 1 cut(s) 1051
AcyI GRCGYC 2 cut(s) 261, 279
AdeI CACNNNGTG 1 cut(s) 61
AfaI GTAC 2 cut(s) 713, 1365
AfiI CCNNNNNNNGG 4 cut(s) 83, 307, 843, 1036
AflIII ACRYGT 1 cut(s) 1048
AgsI TTSAA 9 cut(s) 45, 139, 485, 565, 676, 768, 1100, 1358, 1388
AluBI AGCT 5 cut(s) 325, 462, 660, 1033, 1350
AluI AGCT 5 cut(s) 325, 462, 660, 1033, 1350
Alw26I GTCTC 3 cut(s) 148, 605, 1030
AlwI GGATC 8 cut(s) 518, 531, 627, 673, 828, 841, 956, 993
Ama87I CYCGRG 2 cut(s) 808, 1293
Aor13HI TCCGGA 1 cut(s) 995
AoxI GGCC 3 cut(s) 85, 754, 1133
ApeKI GCWGC 2 cut(s) 1289, 1325
ApoI RAATTY 5 cut(s) 40, 286, 649, 790, 1382
AspLEI GCGC 1 cut(s) 554
AspS9I GGNCC 3 cut(s) 755, 1134, 1147
AsuC2I CCSGG 4 cut(s) 24, 162, 258, 937
AsuHPI GGTGA 5 cut(s) 107, 205, 606, 1226, 1280
AvaI CYCGRG 2 cut(s) 808, 1293
AvaII GGWCC 1 cut(s) 1147
BamHI GGATCC 2 cut(s) 523, 833
BbrPI CACGTG 1 cut(s) 1051
BbsI GAAGAC 1 cut(s) 1322
BbvCI CCTCAGC 1 cut(s) 1299
BbvI GCAGC 2 cut(s) 1276, 1312
BccI CCATC 6 cut(s) 396, 464, 721, 1014, 1077, 1258
BceAI ACGGC 2 cut(s) 1313, 1325
BcgI CGANNNNNNTGC 4 cut(s) 409, 443, 1271, 1305
BciVI GTATCC 1 cut(s) 443
BcnI CCSGG 4 cut(s) 24, 162, 258, 937
BcoDI GTCTC 3 cut(s) 148, 605, 1030
BfaI CTAG 1 cut(s) 914
BfmI CTRYAG 2 cut(s) 585, 801
BfuI GTATCC 1 cut(s) 443
BisI GCNGC 2 cut(s) 1290, 1326
BlsI GCNGC 2 cut(s) 1291, 1327
Bme1390I CCNGG 4 cut(s) 24, 162, 258, 937
Bme18I GGWCC 1 cut(s) 1147
BmeT110I CYCGRG 2 cut(s) 808, 1293
BmgT120I GGNCC 3 cut(s) 755, 1134, 1147
BmiI GGNNCC 3 cut(s) 350, 525, 835
BmrFI CCNGG 4 cut(s) 24, 162, 258, 937
BmsI GCATC 2 cut(s) 583, 892
BpiI GAAGAC 1 cut(s) 1322
Bpu10I CCTNAGC 1 cut(s) 1299
BpuMI CCSGG 4 cut(s) 24, 162, 258, 937
Bsa29I ATCGAT 1 cut(s) 504
BsaAI YACGTR 2 cut(s) 715, 1051
BsaBI GATNNNNATC 1 cut(s) 702
BsaHI GRCGYC 2 cut(s) 261, 279
BsaI GGTCTC 1 cut(s) 1030
BsaJI CCNNGG 4 cut(s) 130, 397, 1137, 1320
BsaWI WCCGGW 2 cut(s) 616, 995
BsaXI ACNNNNNCTCC 4 cut(s) 111, 141, 585, 615
Bsc4I CCNNNNNNNGG 4 cut(s) 83, 307, 843, 1036
Bse1I ACTGG 3 cut(s) 350, 895, 1150
Bse8I GATNNNNATC 1 cut(s) 702
BseAI TCCGGA 1 cut(s) 995
BseCI ATCGAT 1 cut(s) 504
BseDI CCNNGG 4 cut(s) 130, 397, 1137, 1320
BseGI GGATG 8 cut(s) 199, 241, 358, 407, 732, 1025, 1088, 1240
BseJI GATNNNNATC 1 cut(s) 702
BseLI CCNNNNNNNGG 4 cut(s) 83, 307, 843, 1036
BseMII CTCAG 4 cut(s) 675, 809, 1104, 1290
BseNI ACTGG 3 cut(s) 350, 895, 1150
BseRI GAGGAG 4 cut(s) 174, 196, 228, 1316
BseXI GCAGC 2 cut(s) 1276, 1312
BseYI CCCAGC 2 cut(s) 76, 1029
Bsh1236I CGCG 3 cut(s) 552, 1163, 1281
BshFI GGCC 3 cut(s) 87, 756, 1135
BshVI ATCGAT 1 cut(s) 504
BsiHKCI CYCGRG 2 cut(s) 808, 1293
BsiSI CCGG 6 cut(s) 23, 162, 258, 617, 937, 996
BslI CCNNNNNNNGG 4 cut(s) 83, 307, 843, 1036
BsmAI GTCTC 3 cut(s) 148, 605, 1030
BsmBI CGTCTC 1 cut(s) 148
BsnI GGCC 3 cut(s) 87, 756, 1135
Bso31I GGTCTC 1 cut(s) 1030
BsoBI CYCGRG 2 cut(s) 808, 1293
Bsp13I TCCGGA 1 cut(s) 995
Bsp1407I TGTACA 1 cut(s) 1363
Bsp19I CCATGG 1 cut(s) 1137
BspANI GGCC 3 cut(s) 87, 756, 1135
BspCNI CTCAG 4 cut(s) 676, 810, 1103, 1291
BspDI ATCGAT 1 cut(s) 504
BspEI TCCGGA 1 cut(s) 995
BspFNI CGCG 3 cut(s) 552, 1163, 1281
BspHI TCATGA 1 cut(s) 733
BspLI GGNNCC 3 cut(s) 350, 525, 835
BspPI GGATC 8 cut(s) 518, 531, 627, 673, 828, 841, 956, 993
BspQI GCTCTTC 1 cut(s) 564
BspTNI GGTCTC 1 cut(s) 1030
BsrBI CCGCTC 1 cut(s) 197
BsrGI TGTACA 1 cut(s) 1363
BsrI ACTGG 3 cut(s) 350, 895, 1150
BssECI CCNNGG 4 cut(s) 130, 397, 1137, 1320
BssNI GRCGYC 2 cut(s) 261, 279
BssT1I CCWWGG 1 cut(s) 1137
Bst4CI ACNGT 1 cut(s) 1222
Bst6I CTCTTC 3 cut(s) 192, 321, 564
BstACI GRCGYC 2 cut(s) 261, 279
BstAUI TGTACA 1 cut(s) 1363
BstBAI YACGTR 2 cut(s) 715, 1051
BstC8I GCNNGC 3 cut(s) 758, 1035, 1133
BstDEI CTNAG 6 cut(s) 469, 684, 818, 919, 1090, 1299
BstDSI CCRYGG 2 cut(s) 130, 1137
BstEII GGTNACC 1 cut(s) 164
BstF5I GGATG 8 cut(s) 199, 241, 358, 407, 732, 1025, 1088, 1240
BstFNI CGCG 3 cut(s) 552, 1163, 1281
BstHHI GCGC 1 cut(s) 554
BstMAI GTCTC 3 cut(s) 148, 605, 1030
BstMWI GCNNNNNNNGC 2 cut(s) 1177, 1295
BstPI GGTNACC 1 cut(s) 164
BstSCI CCNGG 4 cut(s) 22, 160, 256, 935
BstSFI CTRYAG 2 cut(s) 585, 801
BstUI CGCG 3 cut(s) 552, 1163, 1281
BstV1I GCAGC 2 cut(s) 1276, 1312
BstV2I GAAGAC 1 cut(s) 1322
BstX2I RGATCY 5 cut(s) 523, 619, 665, 833, 961
BstYI RGATCY 5 cut(s) 523, 619, 665, 833, 961
Bsu15I ATCGAT 1 cut(s) 504
BsuI GTATCC 1 cut(s) 443
BsuRI GGCC 3 cut(s) 87, 756, 1135
BsuTUI ATCGAT 1 cut(s) 504
BtgI CCRYGG 2 cut(s) 130, 1137
BtsCI GGATG 8 cut(s) 199, 241, 358, 407, 732, 1025, 1088, 1240
BtsIMutI CAGTG 2 cut(s) 902, 1098
Cac8I GCNNGC 3 cut(s) 758, 1035, 1133
CciI TCATGA 1 cut(s) 733
CfoI GCGC 1 cut(s) 554
Cfr13I GGNCC 3 cut(s) 755, 1134, 1147
ClaI ATCGAT 1 cut(s) 504
CseI GACGC 2 cut(s) 250, 1287
Csp6I GTAC 2 cut(s) 712, 1364
CviAII CATG 5 cut(s) 307, 646, 734, 931, 1138
CviQI GTAC 2 cut(s) 712, 1364
DdeI CTNAG 6 cut(s) 469, 684, 818, 919, 1090, 1299
DraIII CACNNNGTG 1 cut(s) 61
Eam1104I CTCTTC 3 cut(s) 192, 321, 564
EarI CTCTTC 3 cut(s) 192, 321, 564
EciI GGCGGA 3 cut(s) 357, 1160, 1327
Eco130I CCWWGG 1 cut(s) 1137
Eco31I GGTCTC 1 cut(s) 1030
Eco47I GGWCC 1 cut(s) 1147
Eco57I CTGAAG 1 cut(s) 692
Eco72I CACGTG 1 cut(s) 1051
Eco88I CYCGRG 2 cut(s) 808, 1293
Eco91I GGTNACC 1 cut(s) 164
EcoO65I GGTNACC 1 cut(s) 164
EcoRI GAATTC 2 cut(s) 40, 790
EcoT14I CCWWGG 1 cut(s) 1137
ErhI CCWWGG 1 cut(s) 1137
Esp3I CGTCTC 1 cut(s) 148
FaeI CATG 5 cut(s) 310, 649, 737, 934, 1141
FalI AAGNNNNNCTT 2 cut(s) 561, 593
FatI CATG 5 cut(s) 306, 645, 733, 930, 1137
FauI CCCGC 1 cut(s) 765
FblI GTMKAC 1 cut(s) 804
Fnu4HI GCNGC 2 cut(s) 1290, 1326
FokI GGATG 8 cut(s) 186, 228, 345, 414, 739, 1032, 1095, 1247
Fsp4HI GCNGC 2 cut(s) 1290, 1326
FspBI CTAG 1 cut(s) 914
GlaI GCGC 1 cut(s) 553
GluI GCNGC 2 cut(s) 1290, 1326
GsaI CCCAGC 2 cut(s) 80, 1033
HaeIII GGCC 3 cut(s) 87, 756, 1135
HapII CCGG 6 cut(s) 23, 162, 258, 617, 937, 996
HgaI GACGC 2 cut(s) 250, 1287
HhaI GCGC 1 cut(s) 554
Hin1I GRCGYC 2 cut(s) 261, 279
Hin1II CATG 5 cut(s) 310, 649, 737, 934, 1141
Hin6I GCGC 1 cut(s) 552
HinP1I GCGC 1 cut(s) 552
HincII GTYRAC 1 cut(s) 885
HindII GTYRAC 1 cut(s) 885
HinfI GANTC 8 cut(s) 135, 364, 406, 441, 529, 626, 688, 1229
HpaII CCGG 6 cut(s) 23, 162, 258, 617, 937, 996
HphI GGTGA 5 cut(s) 107, 205, 606, 1226, 1280
Hpy166II GTNNAC 3 cut(s) 805, 885, 1159
Hpy188III TCNNGA 8 cut(s) 291, 301, 410, 496, 623, 692, 734, 996
Hpy8I GTNNAC 3 cut(s) 805, 885, 1159
Hpy99I CGWCG 5 cut(s) 224, 266, 284, 597, 977
HpyAV CCTTC 4 cut(s) 255, 993, 1094, 1202
HpyCH4III ACNGT 1 cut(s) 1222
HpyCH4IV ACGT 6 cut(s) 141, 270, 279, 714, 858, 1050
HpyCH4V TGCA 1 cut(s) 420
HpyF10VI GCNNNNNNNGC 2 cut(s) 1177, 1295
HpyF3I CTNAG 6 cut(s) 469, 684, 818, 919, 1090, 1299
HpySE526I ACGT 6 cut(s) 141, 270, 279, 714, 858, 1050
Hsp92I GRCGYC 2 cut(s) 261, 279
Hsp92II CATG 5 cut(s) 310, 649, 737, 934, 1141
HspAI GCGC 1 cut(s) 552
Kpn2I TCCGGA 1 cut(s) 995
LguI GCTCTTC 1 cut(s) 564
LmnI GCTCC 3 cut(s) 559, 1177, 1355
Lsp1109I GCAGC 2 cut(s) 1276, 1312
LweI GCATC 2 cut(s) 583, 892
MaeI CTAG 1 cut(s) 914
MaeII ACGT 6 cut(s) 141, 270, 279, 714, 858, 1050
MaeIII GTNAC 5 cut(s) 154, 164, 211, 612, 1330
MbiI CCGCTC 1 cut(s) 197
MflI RGATCY 5 cut(s) 523, 619, 665, 833, 961
MluCI AATT 7 cut(s) 40, 286, 485, 649, 676, 790, 1382
MlyI GAGTC 2 cut(s) 400, 1223
MmeI TCCRAC 2 cut(s) 262, 616
MroI TCCGGA 1 cut(s) 995
MseI TTAA 4 cut(s) 110, 273, 783, 954
MslI CAYNNNNRTG 2 cut(s) 62, 1185
MspA1I CMGCKG 1 cut(s) 1033
MspI CCGG 6 cut(s) 23, 162, 258, 617, 937, 996
MspR9I CCNGG 4 cut(s) 24, 162, 258, 937
MvnI CGCG 3 cut(s) 552, 1163, 1281
MwoI GCNNNNNNNGC 2 cut(s) 1177, 1295
NciI CCSGG 4 cut(s) 24, 162, 258, 937
NcoI CCATGG 1 cut(s) 1137
NlaIII CATG 5 cut(s) 310, 649, 737, 934, 1141
NlaIV GGNNCC 3 cut(s) 350, 525, 835
NmuCI GTSAC 3 cut(s) 211, 612, 1330
PagI TCATGA 1 cut(s) 733
PciSI GCTCTTC 1 cut(s) 564
PcsI WCGNNNNNNNCGW 3 cut(s) 276, 325, 501
PfeI GAWTC 6 cut(s) 135, 364, 441, 529, 626, 688
PflFI GACNNNGTC 1 cut(s) 597
PkrI GCNGC 2 cut(s) 1291, 1327
PleI GAGTC 2 cut(s) 400, 1223
PmaCI CACGTG 1 cut(s) 1051
PmlI CACGTG 1 cut(s) 1051
PpsI GAGTC 2 cut(s) 400, 1223
Ppu21I YACGTR 2 cut(s) 715, 1051
Psp1406I AACGTT 1 cut(s) 270
PspCI CACGTG 1 cut(s) 1051
PspEI GGTNACC 1 cut(s) 164
PspFI CCCAGC 2 cut(s) 76, 1029
PspN4I GGNNCC 3 cut(s) 350, 525, 835
PspPI GGNCC 3 cut(s) 755, 1134, 1147
PsuI RGATCY 5 cut(s) 523, 619, 665, 833, 961
PsyI GACNNNGTC 1 cut(s) 597
PvuII CAGCTG 1 cut(s) 1033
RsaI GTAC 2 cut(s) 713, 1365
RsaNI GTAC 2 cut(s) 712, 1364
RseI CAYNNNNRTG 2 cut(s) 62, 1185
SapI GCTCTTC 1 cut(s) 564
SaqAI TTAA 4 cut(s) 110, 273, 783, 954
SatI GCNGC 2 cut(s) 1290, 1326
Sau96I GGNCC 3 cut(s) 755, 1134, 1147
SchI GAGTC 2 cut(s) 400, 1223
ScrFI CCNGG 4 cut(s) 24, 162, 258, 937
SfaNI GCATC 2 cut(s) 583, 892
SfcI CTRYAG 2 cut(s) 585, 801
SinI GGWCC 1 cut(s) 1147
SmiMI CAYNNNNRTG 2 cut(s) 62, 1185
Sse9I AATT 7 cut(s) 40, 286, 485, 649, 676, 790, 1382
SspMI CTAG 1 cut(s) 914
StyD4I CCNGG 4 cut(s) 22, 160, 256, 935
StyI CCWWGG 1 cut(s) 1137
TaaI ACNGT 1 cut(s) 1222
TaiI ACGT 6 cut(s) 144, 273, 282, 717, 861, 1053
TaqI TCGA 5 cut(s) 264, 495, 504, 624, 788
TaqII GACCGA 1 cut(s) 1334
TasI AATT 7 cut(s) 40, 286, 485, 649, 676, 790, 1382
TatI WGTACW 1 cut(s) 1363
TfiI GAWTC 6 cut(s) 135, 364, 441, 529, 626, 688
Tru1I TTAA 4 cut(s) 110, 273, 783, 954
Tru9I TTAA 4 cut(s) 110, 273, 783, 954
TscAI CASTG 2 cut(s) 902, 1098
TseFI GTSAC 3 cut(s) 211, 612, 1330
TseI GCWGC 2 cut(s) 1289, 1325
Tsp45I GTSAC 3 cut(s) 211, 612, 1330
TspDTI ATGAA 2 cut(s) 521, 662
TspRI CASTG 2 cut(s) 902, 1098
Tth111I GACNNNGTC 1 cut(s) 597
VpaK11BI GGWCC 1 cut(s) 1147
XapI RAATTY 5 cut(s) 40, 286, 649, 790, 1382
XcmI CCANNNNNNNNNTGG 1 cut(s) 342
XmiI GTMKAC 1 cut(s) 804
XspI CTAG 1 cut(s) 914
ZraI GACGTC 1 cut(s) 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.