Rmu_sc0000591.1_g000008

UDP-glycosyltransferase 89A2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000591.1
OG0003168
Physical Location & Seq
Reverse (-)
32737 .. 33435
699 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000591.1_g000008.1.cds

Sequence Viewer

Length: 534 bp
atgctaaatcccataaagggatcttgccaaaattacttttgggctcaaacaatacctgatgggcttgaggaaagggttgccggccgaggagtgctgataaagagttgggtcccccaggtgttgatcctgggtgtgttgatattggcctggcccatggaggctgaccagtttgtgaacgccaagctgttggtgaagggcatgggcgtcgctgtacaagtgggtgagagtgctaatgtgatacccgaccgggcccatttgggaaacatgatccatgagtcactgactgggaacaaacctgaaaaggtgagtgcaagggtgcttagagcaagtccacccgttgagcttgaccgtcaagaactagtatctgactggtcaagctcaatagtggaaatacaaggcaaaaaatcagtgaatagtcttgaccggtcaagctcaacaggtgaacttgctcttagggacaaggcatttggtgctgtgagaaatggtgggagctcttccaagcatttggatgagcttgtgaaagaattggcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

177

Amino Acids

19.17

Weight (kDa)

6.84

Isoelectric Point (pI)

26.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 28, 118, 262
AcoI YGGCCR 1 cut(s) 82
AcyI GRCGYC 1 cut(s) 204
AfaI GTAC 1 cut(s) 213
AfiI CCNNNNNNNGG 1 cut(s) 17
AgeI ACCGGT 1 cut(s) 423
AhlI ACTAGT 1 cut(s) 358
AjnI CCWGG 3 cut(s) 114, 126, 146
AluBI AGCT 6 cut(s) 184, 343, 378, 432, 492, 514
AluI AGCT 6 cut(s) 184, 343, 378, 432, 492, 514
Alw21I GWGCWC 1 cut(s) 494
AlwI GGATC 3 cut(s) 28, 118, 262
AoxI GGCC 4 cut(s) 82, 144, 149, 249
ApaI GGGCCC 1 cut(s) 253
ArsI GACNNNNNNTTYG 2 cut(s) 449, 481
AsiGI ACCGGT 1 cut(s) 423
AspS9I GGNCC 4 cut(s) 109, 150, 249, 250
AsuC2I CCSGG 1 cut(s) 248
AsuHPI GGTGA 4 cut(s) 202, 233, 316, 452
AvaII GGWCC 1 cut(s) 109
BaeGI GKGCMC 1 cut(s) 253
BanII GRGCYC 3 cut(s) 46, 253, 494
Bbv12I GWGCWC 1 cut(s) 494
BccI CCATC 1 cut(s) 53
BcgI CGANNNNNNTGC 2 cut(s) 187, 221
BciT130I CCWGG 3 cut(s) 116, 128, 148
BcnI CCSGG 1 cut(s) 248
BcuI ACTAGT 1 cut(s) 358
BfaI CTAG 1 cut(s) 359
Bme1390I CCNGG 4 cut(s) 116, 128, 148, 248
Bme18I GGWCC 1 cut(s) 109
BmgT120I GGNCC 4 cut(s) 109, 150, 249, 250
BmiI GGNNCC 3 cut(s) 110, 111, 251
BmrFI CCNGG 4 cut(s) 116, 128, 148, 248
BmrI ACTGGG 1 cut(s) 294
BmuI ACTGGG 1 cut(s) 294
BpuEI CTTGAG 1 cut(s) 86
BpuMI CCSGG 1 cut(s) 248
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 4 cut(s) 85, 114, 127, 153
BsaWI WCCGGW 1 cut(s) 423
Bsc4I CCNNNNNNNGG 1 cut(s) 17
Bse118I RCCGGY 2 cut(s) 80, 423
Bse1I ACTGG 3 cut(s) 166, 289, 374
BseBI CCWGG 3 cut(s) 116, 128, 148
BseDI CCNNGG 4 cut(s) 85, 114, 127, 153
BseGI GGATG 1 cut(s) 514
BseLI CCNNNNNNNGG 1 cut(s) 17
BseNI ACTGG 3 cut(s) 166, 289, 374
BseRI GAGGAG 1 cut(s) 102
BseSI GKGCMC 1 cut(s) 253
BseX3I CGGCCG 1 cut(s) 82
Bsh1285I CGRYCG 2 cut(s) 85, 247
BshFI GGCC 4 cut(s) 84, 146, 151, 251
BshTI ACCGGT 1 cut(s) 423
BsiEI CGRYCG 2 cut(s) 85, 247
BsiHKAI GWGCWC 1 cut(s) 494
BsiSI CCGG 3 cut(s) 81, 247, 424
BslFI GGGAC 2 cut(s) 95, 470
BslI CCNNNNNNNGG 1 cut(s) 17
BsmFI GGGAC 2 cut(s) 95, 470
BsnI GGCC 4 cut(s) 84, 146, 151, 251
Bsp120I GGGCCC 1 cut(s) 249
Bsp1286I GDGCHC 3 cut(s) 46, 253, 494
Bsp1407I TGTACA 1 cut(s) 211
Bsp143I GATC 3 cut(s) 20, 123, 267
Bsp19I CCATGG 1 cut(s) 153
BspANI GGCC 4 cut(s) 84, 146, 151, 251
BspLI GGNNCC 3 cut(s) 110, 111, 251
BspPI GGATC 3 cut(s) 28, 118, 262
BspQI GCTCTTC 1 cut(s) 499
BsrFI RCCGGY 2 cut(s) 80, 423
BsrGI TGTACA 1 cut(s) 211
BsrI ACTGG 3 cut(s) 166, 289, 374
BssAI RCCGGY 2 cut(s) 80, 423
BssECI CCNNGG 4 cut(s) 85, 114, 127, 153
BssMI GATC 3 cut(s) 20, 123, 267
BssNI GRCGYC 1 cut(s) 204
BssT1I CCWWGG 1 cut(s) 153
Bst2UI CCWGG 3 cut(s) 116, 128, 148
Bst4CI ACNGT 1 cut(s) 350
Bst6I CTCTTC 1 cut(s) 499
BstACI GRCGYC 1 cut(s) 204
BstAPI GCANNNNNTGC 1 cut(s) 470
BstAUI TGTACA 1 cut(s) 211
BstC8I GCNNGC 1 cut(s) 82
BstDEI CTNAG 2 cut(s) 320, 452
BstDSI CCRYGG 1 cut(s) 153
BstF5I GGATG 1 cut(s) 514
BstKTI GATC 3 cut(s) 23, 126, 270
BstMBI GATC 3 cut(s) 20, 123, 267
BstMCI CGRYCG 2 cut(s) 85, 247
BstMWI GCNNNNNNNGC 1 cut(s) 470
BstNI CCWGG 3 cut(s) 116, 128, 148
BstSCI CCNGG 4 cut(s) 114, 126, 146, 246
BstSLI GKGCMC 1 cut(s) 253
BstX2I RGATCY 1 cut(s) 20
BstXI CCANNNNNNTGG 2 cut(s) 187, 505
BstYI RGATCY 1 cut(s) 20
BstZI CGGCCG 1 cut(s) 82
BsuRI GGCC 4 cut(s) 84, 146, 151, 251
BtgI CCRYGG 1 cut(s) 153
BtsCI GGATG 1 cut(s) 514
BtsIMutI CAGTG 2 cut(s) 278, 414
Cac8I GCNNGC 1 cut(s) 82
Cfr10I RCCGGY 2 cut(s) 80, 423
Cfr13I GGNCC 4 cut(s) 109, 150, 249, 250
CseI GACGC 1 cut(s) 193
Csp6I GTAC 1 cut(s) 212
CspAI ACCGGT 1 cut(s) 423
CviAII CATG 4 cut(s) 154, 199, 265, 272
CviQI GTAC 1 cut(s) 212
DdeI CTNAG 2 cut(s) 320, 452
DpnI GATC 3 cut(s) 22, 125, 269
DpnII GATC 3 cut(s) 20, 123, 267
EaeI YGGCCR 1 cut(s) 82
EagI CGGCCG 1 cut(s) 82
Eam1104I CTCTTC 1 cut(s) 499
EarI CTCTTC 1 cut(s) 499
Ecl136II GAGCTC 1 cut(s) 492
EclXI CGGCCG 1 cut(s) 82
Eco130I CCWWGG 1 cut(s) 153
Eco24I GRGCYC 3 cut(s) 46, 253, 494
Eco47I GGWCC 1 cut(s) 109
Eco52I CGGCCG 1 cut(s) 82
Eco53kI GAGCTC 1 cut(s) 492
EcoICRI GAGCTC 1 cut(s) 492
EcoO109I RGGNCCY 1 cut(s) 109
EcoRII CCWGG 3 cut(s) 114, 126, 146
EcoT14I CCWWGG 1 cut(s) 153
EcoT38I GRGCYC 3 cut(s) 46, 253, 494
ErhI CCWWGG 1 cut(s) 153
FaeI CATG 4 cut(s) 157, 202, 268, 275
FaiI YATR 5 cut(s) 14, 155, 200, 266, 273
FaqI GGGAC 2 cut(s) 95, 470
FatI CATG 4 cut(s) 153, 198, 264, 271
FokI GGATG 1 cut(s) 521
FriOI GRGCYC 3 cut(s) 46, 253, 494
FspBI CTAG 1 cut(s) 359
HaeIII GGCC 4 cut(s) 84, 146, 151, 251
HapII CCGG 3 cut(s) 81, 247, 424
HgaI GACGC 1 cut(s) 193
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 4 cut(s) 157, 202, 268, 275
HinfI GANTC 1 cut(s) 275
HpaII CCGG 3 cut(s) 81, 247, 424
HphI GGTGA 4 cut(s) 202, 233, 316, 452
Hpy166II GTNNAC 3 cut(s) 175, 332, 443
Hpy188I TCNGA 1 cut(s) 367
Hpy188III TCNNGA 2 cut(s) 353, 419
Hpy8I GTNNAC 3 cut(s) 175, 332, 443
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 1 cut(s) 187
HpyCH4III ACNGT 1 cut(s) 350
HpyCH4V TGCA 1 cut(s) 311
HpyF10VI GCNNNNNNNGC 1 cut(s) 470
HpyF3I CTNAG 2 cut(s) 320, 452
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 4 cut(s) 157, 202, 268, 275
KflI GGGWCCC 1 cut(s) 109
KroI GCCGGC 1 cut(s) 80
KroNI GCCGGC 1 cut(s) 82
Kzo9I GATC 3 cut(s) 20, 123, 267
LguI GCTCTTC 1 cut(s) 499
LmnI GCTCC 1 cut(s) 489
MaeI CTAG 1 cut(s) 359
MaeIII GTNAC 1 cut(s) 276
MalI GATC 3 cut(s) 22, 125, 269
MboI GATC 3 cut(s) 20, 123, 267
MboII GAAGA 1 cut(s) 486
MflI RGATCY 1 cut(s) 20
MhlI GDGCHC 3 cut(s) 46, 253, 494
MluCI AATT 2 cut(s) 31, 524
MlyI GAGTC 1 cut(s) 284
MnlI CCTC 3 cut(s) 61, 80, 151
MroNI GCCGGC 1 cut(s) 80
MseI TTAA 1 cut(s) 532
MslI CAYNNNNRTG 1 cut(s) 507
MspI CCGG 3 cut(s) 81, 247, 424
MspR9I CCNGG 4 cut(s) 116, 128, 148, 248
MvaI CCWGG 3 cut(s) 116, 128, 148
MwoI GCNNNNNNNGC 1 cut(s) 470
NaeI GCCGGC 1 cut(s) 82
NciI CCSGG 1 cut(s) 248
NcoI CCATGG 1 cut(s) 153
NdeII GATC 3 cut(s) 20, 123, 267
NgoMIV GCCGGC 1 cut(s) 80
NlaIII CATG 4 cut(s) 157, 202, 268, 275
NlaIV GGNNCC 3 cut(s) 110, 111, 251
NmeAIII GCCGAG 1 cut(s) 110
NmuCI GTSAC 1 cut(s) 276
PciSI GCTCTTC 1 cut(s) 499
PdiI GCCGGC 1 cut(s) 82
PinAI ACCGGT 1 cut(s) 423
PleI GAGTC 1 cut(s) 283
PpsI GAGTC 1 cut(s) 283
PpuMI RGGWCCY 1 cut(s) 109
Psp124BI GAGCTC 1 cut(s) 494
Psp5II RGGWCCY 1 cut(s) 109
Psp6I CCWGG 3 cut(s) 114, 126, 146
PspGI CCWGG 3 cut(s) 114, 126, 146
PspN4I GGNNCC 3 cut(s) 110, 111, 251
PspOMI GGGCCC 1 cut(s) 249
PspPI GGNCC 4 cut(s) 109, 150, 249, 250
PspPPI RGGWCCY 1 cut(s) 109
PsuI RGATCY 1 cut(s) 20
RsaI GTAC 1 cut(s) 213
RsaNI GTAC 1 cut(s) 212
RseI CAYNNNNRTG 1 cut(s) 507
SacI GAGCTC 1 cut(s) 494
SapI GCTCTTC 1 cut(s) 499
SaqAI TTAA 1 cut(s) 532
Sau3AI GATC 3 cut(s) 20, 123, 267
Sau96I GGNCC 4 cut(s) 109, 150, 249, 250
SchI GAGTC 1 cut(s) 284
ScrFI CCNGG 4 cut(s) 116, 128, 148, 248
SduI GDGCHC 3 cut(s) 46, 253, 494
SinI GGWCC 1 cut(s) 109
SmiMI CAYNNNNRTG 1 cut(s) 507
SmlI CTYRAG 1 cut(s) 65
SmoI CTYRAG 1 cut(s) 65
SpeI ACTAGT 1 cut(s) 358
Sse9I AATT 2 cut(s) 31, 524
SspMI CTAG 1 cut(s) 359
SstI GAGCTC 1 cut(s) 494
StyD4I CCNGG 4 cut(s) 114, 126, 146, 246
StyI CCWWGG 1 cut(s) 153
TaaI ACNGT 1 cut(s) 350
TasI AATT 2 cut(s) 31, 524
TatI WGTACW 1 cut(s) 211
Tru1I TTAA 1 cut(s) 532
Tru9I TTAA 1 cut(s) 532
TscAI CASTG 2 cut(s) 285, 414
TseFI GTSAC 1 cut(s) 276
Tsp45I GTSAC 1 cut(s) 276
TspRI CASTG 2 cut(s) 285, 414
VpaK11BI GGWCC 1 cut(s) 109
XspI CTAG 1 cut(s) 359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.