Rh4CG377100

UDP-glycosyltransferase 89A2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0003168
Physical Location & Seq
Forward (+)
63033030 .. 63033740
711 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG377100.1

Sequence Viewer

Length: 711 bp
ATGGGCCACAACCGGGTTTACAGTGTCGGCCCATTGAGTCTGATTGGTGCCGGAGATGGTGGTTTGGATCGGGCCAACCTGAACACGGGTTCCGGTGGCGATGTAATGGCGTGGCTTGACGGGTGTCCCGATGGGTCTGTGCTGTACGTTTGTTTTGGGAGTAAAAAATTGTTGAATAGTAAACAAATGGAGGCGTTGGCTAGTGGGCTCGAGCGGAGCGGGGTGAGATTTGTGTGGGCTGTGAAAACGGGCTCGGCCCAAGAAGCAAAGGACGGGTACGGTGTTGTGCCCGAGGGGTTTGAGGAGCGGGTTGCCGGGCGGGGCTGGCTGGTGAAAGGTTGGGCGCCGCAGGTGTTGATATTGGGTCACCGGGCCGTGGGCGGATTCGTGAGCCATTGCGGGTGGAACTCAGTGCTCGAAGCGATAGTGGGTGGGGTTTTGATATTGGGCTGGCCCATGGAGGCGAACCAGTTTGTGAATGTCAAGCTGTTGGTGGAGGACATGGGTGTGGCCATACAAGTGTGCGAGGGTGCGAGCGGCGTACCCGACCCGGCCCAATTAGGAAAGGTGATTGCCGAGTCACTAAGCAGCGACTCGGCTGAAAAAGTGAGAGCAAAGGAGCAGAGGGACAAGGCATTTGTCGCTGTGAGAGATGGTGGTAGCTCTTCAAAAGATTTGGATGAGCTTGTGAAACAGTTGAGCCAACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

236

Amino Acids

24.8

Weight (kDa)

5.46

Isoelectric Point (pI)

26.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 45 - 173 1e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 340
Acc36I ACCTGC 1 cut(s) 340
AccB1I GGYRCC 2 cut(s) 47, 343
AccBSI CCGCTC 4 cut(s) 214, 219, 307, 537
AciI CCGC 8 cut(s) 214, 219, 307, 319, 347, 381, 399, 537
AclWI GGATC 1 cut(s) 75
AcoI YGGCCR 1 cut(s) 510
AcyI GRCGYC 1 cut(s) 344
AfaI GTAC 3 cut(s) 146, 278, 543
AfiI CCNNNNNNNGG 3 cut(s) 13, 85, 376
AgsI TTSAA 2 cut(s) 175, 669
AloI GAACNNNNNNTCC 2 cut(s) 74, 106
AluBI AGCT 3 cut(s) 487, 663, 685
AluI AGCT 3 cut(s) 487, 663, 685
Alw21I GWGCWC 1 cut(s) 417
AlwI GGATC 1 cut(s) 75
Ama87I CYCGRG 2 cut(s) 209, 290
AoxI GGCC 8 cut(s) 4, 28, 72, 255, 372, 452, 510, 552
ApeKI GCWGC 1 cut(s) 588
ArsI GACNNNNNNTTYG 2 cut(s) 620, 652
AspLEI GCGC 1 cut(s) 346
AspS9I GGNCC 7 cut(s) 4, 29, 72, 256, 372, 453, 553
AsuC2I CCSGG 4 cut(s) 14, 316, 371, 551
AsuHPI GGTGA 4 cut(s) 235, 343, 359, 580
AvaI CYCGRG 2 cut(s) 209, 290
BaeGI GKGCMC 1 cut(s) 291
BalI TGGCCA 1 cut(s) 512
BanI GGYRCC 2 cut(s) 47, 343
BanII GRGCYC 2 cut(s) 210, 254
Bbv12I GWGCWC 1 cut(s) 417
BbvI GCAGC 1 cut(s) 600
BccI CCATC 3 cut(s) 50, 125, 647
BceAI ACGGC 1 cut(s) 359
BcnI CCSGG 4 cut(s) 14, 316, 371, 551
BfaI CTAG 1 cut(s) 201
BfoI RGCGCY 1 cut(s) 347
BfuAI ACCTGC 1 cut(s) 340
BisI GCNGC 3 cut(s) 347, 538, 589
BlsI GCNGC 3 cut(s) 348, 539, 590
Bme1390I CCNGG 4 cut(s) 14, 316, 371, 551
BmeT110I CYCGRG 2 cut(s) 209, 290
BmgT120I GGNCC 7 cut(s) 4, 29, 72, 256, 372, 453, 553
BmiI GGNNCC 3 cut(s) 49, 91, 345
BmrFI CCNGG 4 cut(s) 14, 316, 371, 551
BoxI GACNNNNGTC 1 cut(s) 123
BpuMI CCSGG 4 cut(s) 14, 316, 371, 551
BsaHI GRCGYC 1 cut(s) 344
BsaJI CCNNGG 3 cut(s) 291, 375, 456
BsaWI WCCGGW 1 cut(s) 92
Bsc4I CCNNNNNNNGG 3 cut(s) 13, 85, 376
Bse1I ACTGG 1 cut(s) 469
Bse3DI GCAATG 1 cut(s) 394
BseDI CCNNGG 3 cut(s) 291, 375, 456
BseGI GGATG 1 cut(s) 685
BseLI CCNNNNNNNGG 3 cut(s) 13, 85, 376
BseMI GCAATG 1 cut(s) 394
BseMII CTCAG 1 cut(s) 423
BseNI ACTGG 1 cut(s) 469
BseRI GAGGAG 1 cut(s) 317
BseSI GKGCMC 1 cut(s) 291
BseXI GCAGC 1 cut(s) 600
BshFI GGCC 8 cut(s) 6, 30, 74, 257, 374, 454, 512, 554
BshNI GGYRCC 2 cut(s) 47, 343
BsiHKAI GWGCWC 1 cut(s) 417
BsiHKCI CYCGRG 2 cut(s) 209, 290
BsiSI CCGG 6 cut(s) 13, 51, 93, 315, 370, 551
BslFI GGGAC 2 cut(s) 111, 641
BslI CCNNNNNNNGG 3 cut(s) 13, 85, 376
BsmFI GGGAC 2 cut(s) 111, 641
BsnI GGCC 8 cut(s) 6, 30, 74, 257, 374, 454, 512, 554
BsoBI CYCGRG 2 cut(s) 209, 290
Bsp1286I GDGCHC 4 cut(s) 210, 254, 291, 417
Bsp143I GATC 1 cut(s) 67
Bsp19I CCATGG 1 cut(s) 456
BspACI CCGC 8 cut(s) 214, 219, 307, 319, 347, 381, 399, 537
BspANI GGCC 8 cut(s) 6, 30, 74, 257, 374, 454, 512, 554
BspCNI CTCAG 1 cut(s) 422
BspLI GGNNCC 3 cut(s) 49, 91, 345
BspMI ACCTGC 1 cut(s) 340
BspPI GGATC 1 cut(s) 75
BspQI GCTCTTC 1 cut(s) 670
BspT107I GGYRCC 2 cut(s) 47, 343
BsrBI CCGCTC 4 cut(s) 214, 219, 307, 537
BsrDI GCAATG 1 cut(s) 394
BsrI ACTGG 1 cut(s) 469
BssECI CCNNGG 3 cut(s) 291, 375, 456
BssMI GATC 1 cut(s) 67
BssNI GRCGYC 1 cut(s) 344
BssT1I CCWWGG 1 cut(s) 456
Bst4CI ACNGT 3 cut(s) 23, 281, 696
Bst6I CTCTTC 1 cut(s) 670
BstACI GRCGYC 1 cut(s) 344
BstC8I GCNNGC 3 cut(s) 326, 452, 535
BstDEI CTNAG 2 cut(s) 409, 584
BstDSI CCRYGG 2 cut(s) 375, 456
BstEII GGTNACC 1 cut(s) 365
BstF5I GGATG 1 cut(s) 685
BstH2I RGCGCY 1 cut(s) 347
BstHHI GCGC 1 cut(s) 346
BstKTI GATC 1 cut(s) 70
BstMBI GATC 1 cut(s) 67
BstMWI GCNNNNNNNGC 3 cut(s) 263, 325, 641
BstPAI GACNNNNGTC 1 cut(s) 123
BstPI GGTNACC 1 cut(s) 365
BstSCI CCNGG 4 cut(s) 12, 314, 369, 549
BstSLI GKGCMC 1 cut(s) 291
BstV1I GCAGC 1 cut(s) 600
BsuRI GGCC 8 cut(s) 6, 30, 74, 257, 374, 454, 512, 554
BtgI CCRYGG 2 cut(s) 375, 456
BtgZI GCGATG 1 cut(s) 114
BtsCI GGATG 1 cut(s) 685
BtsIMutI CAGTG 2 cut(s) 28, 417
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 3 cut(s) 326, 452, 535
CfoI GCGC 1 cut(s) 346
Cfr13I GGNCC 7 cut(s) 4, 29, 72, 256, 372, 453, 553
Csp6I GTAC 3 cut(s) 145, 277, 542
CviAII CATG 2 cut(s) 457, 502
CviQI GTAC 3 cut(s) 145, 277, 542
DdeI CTNAG 2 cut(s) 409, 584
DinI GGCGCC 1 cut(s) 345
DpnI GATC 1 cut(s) 69
DpnII GATC 1 cut(s) 67
EaeI YGGCCR 1 cut(s) 510
Eam1104I CTCTTC 1 cut(s) 670
EarI CTCTTC 1 cut(s) 670
EciI GGCGGA 1 cut(s) 396
Eco130I CCWWGG 1 cut(s) 456
Eco24I GRGCYC 2 cut(s) 210, 254
Eco88I CYCGRG 2 cut(s) 209, 290
Eco91I GGTNACC 1 cut(s) 365
EcoO65I GGTNACC 1 cut(s) 365
EcoT14I CCWWGG 1 cut(s) 456
EcoT38I GRGCYC 2 cut(s) 210, 254
EgeI GGCGCC 1 cut(s) 345
EheI GGCGCC 1 cut(s) 345
ErhI CCWWGG 1 cut(s) 456
FaeI CATG 2 cut(s) 460, 505
FaiI YATR 3 cut(s) 458, 503, 515
FaqI GGGAC 2 cut(s) 111, 641
FatI CATG 2 cut(s) 456, 501
FauI CCCGC 4 cut(s) 212, 300, 312, 392
Fnu4HI GCNGC 3 cut(s) 347, 538, 589
FokI GGATG 1 cut(s) 692
FriOI GRGCYC 2 cut(s) 210, 254
Fsp4HI GCNGC 3 cut(s) 347, 538, 589
FspBI CTAG 1 cut(s) 201
GlaI GCGC 1 cut(s) 345
GluI GCNGC 3 cut(s) 347, 538, 589
HaeII RGCGCY 1 cut(s) 347
HaeIII GGCC 8 cut(s) 6, 30, 74, 257, 374, 454, 512, 554
HapII CCGG 6 cut(s) 13, 51, 93, 315, 370, 551
HhaI GCGC 1 cut(s) 346
Hin1I GRCGYC 1 cut(s) 344
Hin1II CATG 2 cut(s) 460, 505
Hin6I GCGC 1 cut(s) 344
HinP1I GCGC 1 cut(s) 344
HinfI GANTC 4 cut(s) 37, 384, 578, 593
HpaII CCGG 6 cut(s) 13, 51, 93, 315, 370, 551
HphI GGTGA 4 cut(s) 235, 343, 359, 580
Hpy166II GTNNAC 2 cut(s) 19, 182
Hpy188I TCNGA 1 cut(s) 42
Hpy188III TCNNGA 2 cut(s) 128, 388
Hpy8I GTNNAC 2 cut(s) 19, 182
HpyCH4III ACNGT 3 cut(s) 23, 281, 696
HpyCH4IV ACGT 1 cut(s) 147
HpyF10VI GCNNNNNNNGC 3 cut(s) 263, 325, 641
HpyF3I CTNAG 2 cut(s) 409, 584
HpySE526I ACGT 1 cut(s) 147
Hsp92I GRCGYC 1 cut(s) 344
Hsp92II CATG 2 cut(s) 460, 505
HspAI GCGC 1 cut(s) 344
KasI GGCGCC 1 cut(s) 343
Kzo9I GATC 1 cut(s) 67
LguI GCTCTTC 1 cut(s) 670
LmnI GCTCC 3 cut(s) 216, 304, 619
Lsp1109I GCAGC 1 cut(s) 600
MaeI CTAG 1 cut(s) 201
MaeII ACGT 1 cut(s) 147
MaeIII GTNAC 2 cut(s) 365, 579
MalI GATC 1 cut(s) 69
MbiI CCGCTC 4 cut(s) 214, 219, 307, 537
MboI GATC 1 cut(s) 67
MboII GAAGA 1 cut(s) 657
MhlI GDGCHC 4 cut(s) 210, 254, 291, 417
MlsI TGGCCA 1 cut(s) 512
MluCI AATT 2 cut(s) 167, 557
MluNI TGGCCA 1 cut(s) 512
Mly113I GGCGCC 1 cut(s) 344
MlyI GAGTC 3 cut(s) 46, 587, 587
MnlI CCTC 7 cut(s) 184, 286, 295, 454, 490, 520, 618
Mox20I TGGCCA 1 cut(s) 512
MscI TGGCCA 1 cut(s) 512
MslI CAYNNNNRTG 2 cut(s) 506, 518
Msp20I TGGCCA 1 cut(s) 512
MspI CCGG 6 cut(s) 13, 51, 93, 315, 370, 551
MspR9I CCNGG 4 cut(s) 14, 316, 371, 551
MwoI GCNNNNNNNGC 3 cut(s) 263, 325, 641
NarI GGCGCC 1 cut(s) 344
NciI CCSGG 4 cut(s) 14, 316, 371, 551
NcoI CCATGG 1 cut(s) 456
NdeII GATC 1 cut(s) 67
NlaIII CATG 2 cut(s) 460, 505
NlaIV GGNNCC 3 cut(s) 49, 91, 345
NmeAIII GCCGAG 3 cut(s) 233, 575, 601
NmuCI GTSAC 2 cut(s) 365, 579
PaeR7I CTCGAG 1 cut(s) 209
PaqCI CACCTGC 1 cut(s) 340
PciSI GCTCTTC 1 cut(s) 670
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PfeI GAWTC 1 cut(s) 384
PkrI GCNGC 3 cut(s) 348, 539, 590
PleI GAGTC 3 cut(s) 45, 586, 587
PluTI GGCGCC 1 cut(s) 347
PpsI GAGTC 3 cut(s) 45, 586, 587
PshAI GACNNNNGTC 1 cut(s) 123
PspEI GGTNACC 1 cut(s) 365
PspN4I GGNNCC 3 cut(s) 49, 91, 345
PspPI GGNCC 7 cut(s) 4, 29, 72, 256, 372, 453, 553
PspXI VCTCGAGB 1 cut(s) 209
RsaI GTAC 3 cut(s) 146, 278, 543
RsaNI GTAC 3 cut(s) 145, 277, 542
RseI CAYNNNNRTG 2 cut(s) 506, 518
SapI GCTCTTC 1 cut(s) 670
SatI GCNGC 3 cut(s) 347, 538, 589
Sau3AI GATC 1 cut(s) 67
Sau96I GGNCC 7 cut(s) 4, 29, 72, 256, 372, 453, 553
SchI GAGTC 3 cut(s) 46, 587, 587
ScrFI CCNGG 4 cut(s) 14, 316, 371, 551
SduI GDGCHC 4 cut(s) 210, 254, 291, 417
SetI ASST 8 cut(s) 81, 150, 340, 354, 489, 570, 665, 687
SfoI GGCGCC 1 cut(s) 345
Sfr274I CTCGAG 1 cut(s) 209
SlaI CTCGAG 1 cut(s) 209
SmiMI CAYNNNNRTG 2 cut(s) 506, 518
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 2 cut(s) 167, 557
SsiI CCGC 8 cut(s) 214, 219, 307, 319, 347, 381, 399, 537
SspDI GGCGCC 1 cut(s) 343
SspMI CTAG 1 cut(s) 201
StyD4I CCNGG 4 cut(s) 12, 314, 369, 549
StyI CCWWGG 1 cut(s) 456
TaaI ACNGT 3 cut(s) 23, 281, 696
TaiI ACGT 1 cut(s) 150
TaqI TCGA 2 cut(s) 210, 417
TasI AATT 2 cut(s) 167, 557
TauI GCSGC 2 cut(s) 349, 540
TfiI GAWTC 1 cut(s) 384
TscAI CASTG 2 cut(s) 28, 417
TseFI GTSAC 2 cut(s) 365, 579
TseI GCWGC 1 cut(s) 588
Tsp45I GTSAC 2 cut(s) 365, 579
TspRI CASTG 2 cut(s) 28, 417
XhoI CTCGAG 1 cut(s) 209
XspI CTAG 1 cut(s) 201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.