Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0003168

Physical Location & Seq

Genomic Coordinates Forward (+)

3048983 .. 3051341

Gene Structure 2359 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g04730.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1962 bp

ATGAACGTGAAAAGACAACTGACATTTAAATTTTTCGAAATAAAATTGAGTTATGAATATCATGGGAATTTTTTTTTTTTTCTTTTCAATTTGTTACTCGTAAAGTGTGTTGACTTAGAAATAATTGAGCAGCCACCCCGCTGGCATCCTAAAAGCAACTCCACCGTCCTCCCACCGTCCTCCCCCGCTAAGCACACCCACGTCCTGGTGTTTCCGTACCCAGCCCAGGGCCACATGCTCCCGATCCTGGACCTCACCCACCAGCTAGCCCTCCACGGCCTCGCCATAACCATCCTAATCACACCCAAAAACCTCCCGATCCTCACCCCACTCCTCTCAGCCCACCCCCCGACCTCCGTCAAAACCCTCCTCCTACCCTTCCCTCCTCACCCCGAAATCCCCCCGGGCGCCGAGAACGTCAAGGACATTGGCAACCACGGCAACCGTTACATCATCAACGCGCTTGCCAAACTCCAGGACCCAATTATCCAGTGGTTCAAGTCCCACCCCAACCCACCTGTGGCTCTCGTCTCTGATTTCTTCCTCGGGTGGACCCTACACCTAGCCAATCAGCTCAACATCCCCAGAATTGCGTTCTTCTCCTCCGGGCCGTTCGTGGCAGCCGTGCTCGACTACTGTTGGCGTAATTTAGAGGCGGTTCGGTCGGCATCGACGGTTGTCAATTTTCATGATATTCCGGGATTGCCCTCTTTCAAACAGGAGCATCTTCCCAGCGTGGTCCGCCGCTACAGAGAATCGGATCCCGAGTCTGAATTCTTGAGGATATCCATGCTTGCGAATGCCGAAAGTTGGGGGTGCGTTTTCAATAGCTTTCAAGACTTGGAAGCACACTACTTAGACCACTTGGGGGCCAGAATGGGCCACTCACGTGTTTATGCGGTTGGCCCATTGAGTCTGTTATCAGCTACTGTGGTTGATGCTGGTAAAGGAGGTCGAGCCAACCCGAATTTGGACTCATCGGATGCCAATGTCATGGCCTGGCTCGACGGGTGCCCGGATGGGTCCGTGGTTTATGTTTGCTTTGGGAGTCAGAAGTTGCCCAATAGGCAGCAGATGGAGGGCTTGGCTTCCGGGCTCGAACGGAGCGGGGTCCGTTTTGTATGGGCCGTAAAAACGGGCACGGCCCAACAAGTGGAAGATGGGATCGGAGTTGTGCCTGATGGATTTGAGGAAAGGGTTGGTGGGAGGGGTTTGGTCATAAGGGGCTGGGCTCCACAGGTGTTGATCTTGGGCCATCGGGCCGTGGGTGGATTTGTGAGCCATTGCGGGTGGAACTCGGTGCTGGAAGCAATAGTGGCGGGTGTGTTGGTATTGGGGTGGCCCATGGAGGCTGACCAGTTTGTGAATGCAAGGCTGTTGGTGGAGGACATGGGGGTGGCCGTGAAGGTGTGTGAAGGAGAGAATGCGGTGCCGGAACCAGCGGAGTTGGGAAAGGCGATTGAGGAGGCAATGAGGGGGGAGACGCCGGTGAAGGTGAGGGCAAAGGAGCTGAGGGAGAAGGCGTTTGCGGCGGTGGGAAGCGGCGGGTGCTCTTCAAAGGATTTGGATGAGTTTCTTGCTCACAACATTTTAGAGGGAAAAATGAACTCCATTGATGCCCTTCAAGTATTATTATTATTTGGGGTTAATAATTTGATTAATAACGTTCTTAAATGTAATCTAGATTTGGTTGCAATCAGGTGTATATCAACGGTATTAATAGCTCTCATGACAACATGTTTGTGCAATGAAAGAAATACTAATATGTCCCAAATTCCCAAAAGGACTGACATTGCGACCAATAACGCAATACTATATCTTACGAATTCATTACAATGTCAGACCTTTGTTAGCCAATCCATCAAATTAACTGTGAAGAATAAAATCAATTTAGATATCAATCTAAATGGGGTGTATTCAATTGAGAATTTGAGAGATTTTAATGGATTTATAAATCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

654

Amino Acids

71.87

Weight (kDa)

6.47

Isoelectric Point (pI)

36.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003168)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51210 AT5G03490
fragaria_vesca	FvH4_4g29060 FvH4_4g29061
malus_domestica	MD16G1054300.v1.1 MD16G1054500.v1.1 MD16G1054600.v1.1
prunus_persica	Prupe.1G295300_v2.0.a1
pyrus_communis	pycom16g04730 pycom16g04740 pycom16g04750
rosa_chinensis	RchiOBHm_Chr4g0437141 RchiOBHm_Chr4g0437161
rosa_laevigata	RLG00000006459 RLG00000006463 RLG00000006464 RLG00000009364
rosa_multiflora	Rmu_co8368091.1_g000001 Rmu_sc0000591.1_g000008 Rmu_sc0000591.1_g000012 Rmu_sc0017900.1_g000001 Rmu_sc0017900.1_g000006 Rmu_ssc0000006.1_g000001
rosa_roxburghii	Rroxscaffold_5G00378220 Rroxscaffold_5G00378300
rosa_rugosa	Rorug04G0298300 Rorug04G0298400.1
rosa_samantha	Rh4AG353300 Rh4BG362900 Rh4BG363000 Rh4BG363200 Rh4CG377100 Rh4CG377300 Rh4DG356800 Rh4DG357000
rosa_wichuraiana	Rw4G030950 Rw4G030960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1952
AccB1I	GGYRCC	3 cut(s)	407, 1011, 1429
AccB7I	CCANNNNNTGG	2 cut(s)	205, 1153
AccBSI	CCGCTC	1 cut(s)	1107
AccII	CGCG	1 cut(s)	461
AclI	AACGTT	1 cut(s)	1665
AclWI	GGATC	5 cut(s)	238, 313, 755, 768, 1172
AcoI	YGGCCR	1 cut(s)	1398
AcsI	RAATTY	7 cut(s)	29, 67, 773, 967, 1773, 1825, 1927
AcvI	CACGTG	1 cut(s)	890
AcyI	GRCGYC	2 cut(s)	408, 1484
AfaI	GTAC	1 cut(s)	218
AfiI	CCNNNNNNNGG	9 cut(s)	205, 226, 227, 247, 520, 810, 868, 970, 1153
AflIII	ACRYGT	2 cut(s)	889, 1736
AgsI	TTSAA	8 cut(s)	88, 499, 715, 826, 836, 1557, 1625, 1920
AjiI	CACGTC	1 cut(s)	202
AjnI	CCWGG	5 cut(s)	204, 225, 246, 474, 998
AleI	CACNNNNGTG	1 cut(s)	888
AluBI	AGCT	6 cut(s)	265, 574, 831, 926, 1510, 1724
AluI	AGCT	6 cut(s)	265, 574, 831, 926, 1510, 1724
Alw21I	GWGCWC	2 cut(s)	630, 1553
Alw26I	GTCTC	2 cut(s)	535, 1475
AlwI	GGATC	5 cut(s)	238, 313, 755, 768, 1172
AlwNI	CAGNNNCTG	1 cut(s)	929
Ama87I	CYCGRG	3 cut(s)	403, 545, 764
ApeKI	GCWGC	3 cut(s)	130, 620, 1069
ApoI	RAATTY	7 cut(s)	29, 67, 773, 967, 1773, 1825, 1927
ArsI	GACNNNNNNTTYG	2 cut(s)	1723, 1755
AseI	ATTAAT	2 cut(s)	1659, 1718
AspLEI	GCGC	2 cut(s)	410, 463
AsuC2I	CCSGG	6 cut(s)	404, 405, 607, 699, 1016, 1093
AsuHPI	GGTGA	5 cut(s)	247, 316, 380, 1501, 1507
AsuII	TTCGAA	1 cut(s)	36
AsuNHI	GCTAGC	1 cut(s)	265
AvaI	CYCGRG	3 cut(s)	403, 545, 764
AvaII	GGWCC	6 cut(s)	250, 478, 552, 739, 1023, 1111
BaeGI	GKGCMC	2 cut(s)	1016, 1142
BamHI	GGATCC	1 cut(s)	760
BanI	GGYRCC	3 cut(s)	407, 1011, 1429
BanII	GRGCYC	2 cut(s)	1098, 1234
BbrPI	CACGTG	1 cut(s)	890
Bbv12I	GWGCWC	2 cut(s)	630, 1553
BbvCI	CCTCAGC	1 cut(s)	1511
BbvI	GCAGC	3 cut(s)	142, 632, 1081
BccI	CCATC	7 cut(s)	299, 1013, 1069, 1154, 1175, 1263, 1868
BceAI	ACGGC	8 cut(s)	292, 454, 595, 608, 1112, 1158, 1247, 1385
BciT130I	CCWGG	5 cut(s)	206, 227, 248, 476, 1000
BcnI	CCSGG	6 cut(s)	404, 405, 607, 699, 1016, 1093
BcoDI	GTCTC	2 cut(s)	535, 1475
BfaI	CTAG	3 cut(s)	266, 563, 1682
BfmI	CTRYAG	1 cut(s)	748
BfoI	RGCGCY	1 cut(s)	411
BglI	GCCNNNNNGGC	1 cut(s)	1066
BisI	GCNGC	6 cut(s)	131, 621, 745, 1070, 1530, 1543
BlpI	GCTNAGC	1 cut(s)	189
BlsI	GCNGC	6 cut(s)	132, 622, 746, 1071, 1531, 1544
Bme18I	GGWCC	6 cut(s)	250, 478, 552, 739, 1023, 1111
BmeT110I	CYCGRG	3 cut(s)	403, 545, 764
BmgBI	CACGTC	1 cut(s)	202
BmsI	GCATC	6 cut(s)	154, 677, 733, 928, 973, 1606
BmtI	GCTAGC	1 cut(s)	269
BoxI	GACNNNNGTC	2 cut(s)	356, 677
BpmI	CTGGAG	1 cut(s)	458
Bpu10I	CCTNAGC	1 cut(s)	1511
Bpu1102I	GCTNAGC	1 cut(s)	189
Bpu14I	TTCGAA	1 cut(s)	36
BpuEI	CTTGAG	1 cut(s)	799
BpuMI	CCSGG	6 cut(s)	404, 405, 607, 699, 1016, 1093
BsaAI	YACGTR	1 cut(s)	890
BsaBI	GATNNNNATC	1 cut(s)	1899
BsaHI	GRCGYC	2 cut(s)	408, 1484
BsaXI	ACNNNNNCTCC	2 cut(s)	1508, 1538
Bsc4I	CCNNNNNNNGG	9 cut(s)	205, 226, 227, 247, 520, 810, 868, 970, 1153
Bse118I	RCCGGY	1 cut(s)	1486
Bse1I	ACTGG	2 cut(s)	490, 1357
Bse3DI	GCAATG	4 cut(s)	1282, 1476, 1753, 1791
Bse8I	GATNNNNATC	1 cut(s)	1899
BseBI	CCWGG	5 cut(s)	206, 227, 248, 476, 1000
BseGI	GGATG	6 cut(s)	145, 291, 579, 988, 1024, 1573
BseJI	GATNNNNATC	1 cut(s)	1899
BseLI	CCNNNNNNNGG	9 cut(s)	205, 226, 227, 247, 520, 810, 868, 970, 1153
BseMI	GCAATG	4 cut(s)	1282, 1476, 1753, 1791
BseMII	CTCAG	2 cut(s)	351, 1502
BseNI	ACTGG	2 cut(s)	490, 1357
BseRI	GAGGAG	5 cut(s)	323, 359, 375, 592, 1478
BseSI	GKGCMC	2 cut(s)	1016, 1142
BseXI	GCAGC	3 cut(s)	142, 632, 1081
BseYI	CCCAGC	3 cut(s)	220, 731, 1227
Bsh1236I	CGCG	1 cut(s)	461
Bsh1285I	CGRYCG	1 cut(s)	665
BshNI	GGYRCC	3 cut(s)	407, 1011, 1429
BsiEI	CGRYCG	1 cut(s)	665
BsiHKAI	GWGCWC	2 cut(s)	630, 1553
BsiHKCI	CYCGRG	3 cut(s)	403, 545, 764
BsiSI	CCGG	7 cut(s)	404, 606, 698, 1016, 1092, 1433, 1487
BslFI	GGGAC	2 cut(s)	487, 1753
BslI	CCNNNNNNNGG	9 cut(s)	205, 226, 227, 247, 520, 810, 868, 970, 1153
BsmAI	GTCTC	2 cut(s)	535, 1475
BsmBI	CGTCTC	2 cut(s)	535, 1475
BsmFI	GGGAC	2 cut(s)	487, 1753
BsmI	GAATGC	3 cut(s)	805, 1372, 1429
BsoBI	CYCGRG	3 cut(s)	403, 545, 764
Bsp119I	TTCGAA	1 cut(s)	36
Bsp1286I	GDGCHC	6 cut(s)	630, 1016, 1098, 1142, 1234, 1553
Bsp143I	GATC	5 cut(s)	243, 318, 760, 1164, 1245
Bsp1720I	GCTNAGC	1 cut(s)	189
Bsp19I	CCATGG	1 cut(s)	1344
BspCNI	CTCAG	2 cut(s)	350, 1503
BspFNI	CGCG	1 cut(s)	461
BspHI	TCATGA	2 cut(s)	688, 1728
BspOI	GCTAGC	1 cut(s)	269
BspPI	GGATC	5 cut(s)	238, 313, 755, 768, 1172
BspQI	GCTCTTC	1 cut(s)	1558
BspT104I	TTCGAA	1 cut(s)	36
BspT107I	GGYRCC	3 cut(s)	407, 1011, 1429
BsrBI	CCGCTC	1 cut(s)	1107
BsrDI	GCAATG	4 cut(s)	1282, 1476, 1753, 1791
BsrFI	RCCGGY	1 cut(s)	1486
BsrI	ACTGG	2 cut(s)	490, 1357
BssAI	RCCGGY	1 cut(s)	1486
BssMI	GATC	5 cut(s)	243, 318, 760, 1164, 1245
BssNI	GRCGYC	2 cut(s)	408, 1484
BssT1I	CCWWGG	1 cut(s)	1344
Bst2UI	CCWGG	5 cut(s)	206, 227, 248, 476, 1000
Bst4CI	ACNGT	8 cut(s)	166, 177, 446, 638, 676, 931, 1714, 1873
Bst6I	CTCTTC	1 cut(s)	1558
BstACI	GRCGYC	2 cut(s)	408, 1484
BstBAI	YACGTR	1 cut(s)	890
BstBI	TTCGAA	1 cut(s)	36
BstC8I	GCNNGC	4 cut(s)	143, 267, 465, 795
BstDEI	CTNAG	5 cut(s)	115, 189, 337, 856, 1511
BstDSI	CCRYGG	5 cut(s)	274, 436, 1026, 1263, 1344
BstF5I	GGATG	6 cut(s)	145, 291, 579, 988, 1024, 1573
BstFNI	CGCG	1 cut(s)	461
BstH2I	RGCGCY	1 cut(s)	411
BstHHI	GCGC	2 cut(s)	410, 463
BstKTI	GATC	5 cut(s)	246, 321, 763, 1167, 1248
BstMAI	GTCTC	2 cut(s)	535, 1475
BstMBI	GATC	5 cut(s)	243, 318, 760, 1164, 1245
BstMCI	CGRYCG	1 cut(s)	665
BstMWI	GCNNNNNNNGC	6 cut(s)	438, 741, 1066, 1316, 1529, 1548
BstNI	CCWGG	5 cut(s)	206, 227, 248, 476, 1000
BstNSI	RCATGY	2 cut(s)	238, 1740
BstPAI	GACNNNNGTC	2 cut(s)	356, 677
BstSFI	CTRYAG	1 cut(s)	748
BstSLI	GKGCMC	2 cut(s)	1016, 1142
BstUI	CGCG	1 cut(s)	461
BstV1I	GCAGC	3 cut(s)	142, 632, 1081
BstX2I	RGATCY	1 cut(s)	760
BstXI	CCANNNNNNTGG	2 cut(s)	141, 994
BstYI	RGATCY	1 cut(s)	760
BtgI	CCRYGG	5 cut(s)	274, 436, 1026, 1263, 1344
BtrI	CACGTC	1 cut(s)	202
BtsCI	GGATG	6 cut(s)	145, 291, 579, 988, 1024, 1573
BtsIMutI	CAGTG	1 cut(s)	497
Cac8I	GCNNGC	4 cut(s)	143, 267, 465, 795
CaiI	CAGNNNCTG	1 cut(s)	929
CciI	TCATGA	2 cut(s)	688, 1728
CfoI	GCGC	2 cut(s)	410, 463
Cfr10I	RCCGGY	1 cut(s)	1486
Cfr9I	CCCGGG	1 cut(s)	403
CseI	GACGC	1 cut(s)	1492
Csp6I	GTAC	1 cut(s)	217
CspCI	CAANNNNNGTGG	2 cut(s)	1224, 1259
CviAII	CATG	9 cut(s)	62, 235, 689, 790, 994, 1345, 1390, 1729, 1737
CviQI	GTAC	1 cut(s)	217
DdeI	CTNAG	5 cut(s)	115, 189, 337, 856, 1511
DinI	GGCGCC	1 cut(s)	409
DpnI	GATC	5 cut(s)	245, 320, 762, 1166, 1247
DpnII	GATC	5 cut(s)	243, 318, 760, 1164, 1245
DraI	TTTAAA	1 cut(s)	28
EaeI	YGGCCR	1 cut(s)	1398
Eam1104I	CTCTTC	1 cut(s)	1558
EarI	CTCTTC	1 cut(s)	1558
EciI	GGCGGA	1 cut(s)	731
Eco130I	CCWWGG	1 cut(s)	1344
Eco24I	GRGCYC	2 cut(s)	1098, 1234
Eco32I	GATATC	2 cut(s)	786, 1897
Eco47I	GGWCC	6 cut(s)	250, 478, 552, 739, 1023, 1111
Eco72I	CACGTG	1 cut(s)	890
Eco88I	CYCGRG	3 cut(s)	403, 545, 764
EcoO109I	RGGNCCY	1 cut(s)	478
EcoRI	GAATTC	2 cut(s)	773, 1825
EcoRII	CCWGG	5 cut(s)	204, 225, 246, 474, 998
EcoRV	GATATC	2 cut(s)	786, 1897
EcoT14I	CCWWGG	1 cut(s)	1344
EcoT38I	GRGCYC	2 cut(s)	1098, 1234
EgeI	GGCGCC	1 cut(s)	409
EheI	GGCGCC	1 cut(s)	409
ErhI	CCWWGG	1 cut(s)	1344
Esp3I	CGTCTC	2 cut(s)	535, 1475
FaeI	CATG	9 cut(s)	65, 238, 692, 793, 997, 1348, 1393, 1732, 1740
FaqI	GGGAC	2 cut(s)	487, 1753
FatI	CATG	9 cut(s)	61, 234, 688, 789, 993, 1344, 1389, 1728, 1736
FauI	CCCGC	6 cut(s)	146, 193, 1100, 1280, 1312, 1538
Fnu4HI	GCNGC	6 cut(s)	131, 621, 745, 1070, 1530, 1543
FokI	GGATG	6 cut(s)	132, 278, 566, 995, 1031, 1580
FriOI	GRGCYC	2 cut(s)	1098, 1234
Fsp4HI	GCNGC	6 cut(s)	131, 621, 745, 1070, 1530, 1543
FspBI	CTAG	3 cut(s)	266, 563, 1682
GlaI	GCGC	2 cut(s)	409, 462
GluI	GCNGC	6 cut(s)	131, 621, 745, 1070, 1530, 1543
GsaI	CCCAGC	3 cut(s)	224, 735, 1231
GsuI	CTGGAG	1 cut(s)	458
HaeII	RGCGCY	1 cut(s)	411
HapII	CCGG	7 cut(s)	404, 606, 698, 1016, 1092, 1433, 1487
HgaI	GACGC	1 cut(s)	1492
HhaI	GCGC	2 cut(s)	410, 463
Hin1I	GRCGYC	2 cut(s)	408, 1484
Hin1II	CATG	9 cut(s)	65, 238, 692, 793, 997, 1348, 1393, 1732, 1740
Hin6I	GCGC	2 cut(s)	408, 461
HinP1I	GCGC	2 cut(s)	408, 461
HincII	GTYRAC	1 cut(s)	112
HindII	GTYRAC	1 cut(s)	112
HinfI	GANTC	5 cut(s)	755, 767, 913, 974, 1048
HpaII	CCGG	7 cut(s)	404, 606, 698, 1016, 1092, 1433, 1487
HphI	GGTGA	5 cut(s)	247, 316, 380, 1501, 1507
Hpy166II	GTNNAC	2 cut(s)	112, 552
Hpy188I	TCNGA	7 cut(s)	535, 760, 772, 982, 1053, 1169, 1842
Hpy188III	TCNNGA	8 cut(s)	241, 316, 689, 764, 778, 836, 1682, 1729
Hpy8I	GTNNAC	2 cut(s)	112, 552
Hpy99I	CGWCG	2 cut(s)	676, 1010
HpyAV	CCTTC	6 cut(s)	388, 1399, 1409, 1486, 1513, 1631
HpyCH4III	ACNGT	8 cut(s)	166, 177, 446, 638, 676, 931, 1714, 1873
HpyCH4IV	ACGT	5 cut(s)	6, 201, 417, 889, 1665
HpyCH4V	TGCA	3 cut(s)	1370, 1694, 1746
HpyF10VI	GCNNNNNNNGC	6 cut(s)	438, 741, 1066, 1316, 1529, 1548
HpyF3I	CTNAG	5 cut(s)	115, 189, 337, 856, 1511
HpySE526I	ACGT	5 cut(s)	6, 201, 417, 889, 1665
Hsp92I	GRCGYC	2 cut(s)	408, 1484
Hsp92II	CATG	9 cut(s)	65, 238, 692, 793, 997, 1348, 1393, 1732, 1740
HspAI	GCGC	2 cut(s)	408, 461
KasI	GGCGCC	1 cut(s)	407
Kzo9I	GATC	5 cut(s)	243, 318, 760, 1164, 1245
LguI	GCTCTTC	1 cut(s)	1558
LmnI	GCTCC	5 cut(s)	243, 721, 1104, 1237, 1507
Lsp1109I	GCAGC	3 cut(s)	142, 632, 1081
LweI	GCATC	6 cut(s)	154, 677, 733, 928, 973, 1606
MaeI	CTAG	3 cut(s)	266, 563, 1682
MaeII	ACGT	5 cut(s)	6, 201, 417, 889, 1665
MaeIII	GTNAC	2 cut(s)	93, 446
MalI	GATC	5 cut(s)	245, 320, 762, 1166, 1247
MbiI	CCGCTC	1 cut(s)	1107
MboI	GATC	5 cut(s)	243, 318, 760, 1164, 1245
MboII	GAAGA	6 cut(s)	532, 589, 719, 1169, 1545, 1888
MfeI	CAATTG	1 cut(s)	1920
MflI	RGATCY	1 cut(s)	760
MhlI	GDGCHC	6 cut(s)	630, 1016, 1098, 1142, 1234, 1553
Mly113I	GGCGCC	1 cut(s)	408
MlyI	GAGTC	4 cut(s)	776, 922, 968, 1057
MseI	TTAA	7 cut(s)	27, 1647, 1659, 1671, 1718, 1868, 1941
MslI	CAYNNNNRTG	4 cut(s)	888, 1394, 1741, 1834
MspA1I	CMGCKG	2 cut(s)	141, 1442
MspI	CCGG	7 cut(s)	404, 606, 698, 1016, 1092, 1433, 1487
MunI	CAATTG	1 cut(s)	1920
Mva1269I	GAATGC	3 cut(s)	805, 1372, 1429
MvaI	CCWGG	5 cut(s)	206, 227, 248, 476, 1000
MvnI	CGCG	1 cut(s)	461
MwoI	GCNNNNNNNGC	6 cut(s)	438, 741, 1066, 1316, 1529, 1548
NarI	GGCGCC	1 cut(s)	408
NciI	CCSGG	6 cut(s)	404, 405, 607, 699, 1016, 1093
NcoI	CCATGG	1 cut(s)	1344
NdeII	GATC	5 cut(s)	243, 318, 760, 1164, 1245
NheI	GCTAGC	1 cut(s)	265
NlaIII	CATG	9 cut(s)	65, 238, 692, 793, 997, 1348, 1393, 1732, 1740
NmeAIII	GCCGAG	1 cut(s)	436
NspI	RCATGY	2 cut(s)	238, 1740
NspV	TTCGAA	1 cut(s)	36
OliI	CACNNNNGTG	1 cut(s)	888
PagI	TCATGA	2 cut(s)	688, 1728
PasI	CCCWGGG	1 cut(s)	226
PciI	ACATGT	1 cut(s)	1736
PciSI	GCTCTTC	1 cut(s)	1558
PcsI	WCGNNNNNNNCGW	1 cut(s)	621
PctI	GAATGC	3 cut(s)	805, 1372, 1429
PfeI	GAWTC	1 cut(s)	755
PflMI	CCANNNNNTGG	2 cut(s)	205, 1153
PfoI	TCCNGGA	3 cut(s)	246, 474, 697
PkrI	GCNGC	6 cut(s)	132, 622, 746, 1071, 1531, 1544
PleI	GAGTC	4 cut(s)	775, 921, 968, 1056
PluTI	GGCGCC	1 cut(s)	411
PmaCI	CACGTG	1 cut(s)	890
PmlI	CACGTG	1 cut(s)	890
PpsI	GAGTC	4 cut(s)	775, 921, 968, 1056
Ppu21I	YACGTR	1 cut(s)	890
PpuMI	RGGWCCY	1 cut(s)	478
PscI	ACATGT	1 cut(s)	1736
PshAI	GACNNNNGTC	2 cut(s)	356, 677
PshBI	ATTAAT	2 cut(s)	1659, 1718
PsiI	TTATAA	1 cut(s)	1952
Psp1406I	AACGTT	1 cut(s)	1665
Psp5II	RGGWCCY	1 cut(s)	478
Psp6I	CCWGG	5 cut(s)	204, 225, 246, 474, 998
PspCI	CACGTG	1 cut(s)	890
PspFI	CCCAGC	3 cut(s)	220, 731, 1227
PspGI	CCWGG	5 cut(s)	204, 225, 246, 474, 998
PspPPI	RGGWCCY	1 cut(s)	478
PstNI	CAGNNNCTG	1 cut(s)	929
PsuI	RGATCY	1 cut(s)	760
RsaI	GTAC	1 cut(s)	218
RsaNI	GTAC	1 cut(s)	217
RseI	CAYNNNNRTG	4 cut(s)	888, 1394, 1741, 1834
SapI	GCTCTTC	1 cut(s)	1558
SaqAI	TTAA	7 cut(s)	27, 1647, 1659, 1671, 1718, 1868, 1941
SatI	GCNGC	6 cut(s)	131, 621, 745, 1070, 1530, 1543
Sau3AI	GATC	5 cut(s)	243, 318, 760, 1164, 1245
SchI	GAGTC	4 cut(s)	776, 922, 968, 1057
SduI	GDGCHC	6 cut(s)	630, 1016, 1098, 1142, 1234, 1553
SfaNI	GCATC	6 cut(s)	154, 677, 733, 928, 973, 1606
SfcI	CTRYAG	1 cut(s)	748
SfoI	GGCGCC	1 cut(s)	409
SfuI	TTCGAA	1 cut(s)	36
SgrAI	CRCCGGYG	1 cut(s)	1486
SinI	GGWCC	6 cut(s)	250, 478, 552, 739, 1023, 1111
SmaI	CCCGGG	1 cut(s)	405
SmiI	ATTTAAAT	1 cut(s)	28
SmiMI	CAYNNNNRTG	4 cut(s)	888, 1394, 1741, 1834
SmlI	CTYRAG	1 cut(s)	778
SmoI	CTYRAG	1 cut(s)	778
SspDI	GGCGCC	1 cut(s)	407
SspMI	CTAG	3 cut(s)	266, 563, 1682
StyI	CCWWGG	1 cut(s)	1344
SwaI	ATTTAAAT	1 cut(s)	28
TaaI	ACNGT	8 cut(s)	166, 177, 446, 638, 676, 931, 1714, 1873
TaiI	ACGT	5 cut(s)	9, 204, 420, 892, 1668
TaqI	TCGA	6 cut(s)	36, 630, 671, 955, 1005, 1098
TaqII	GACCGA	1 cut(s)	651
TauI	GCSGC	3 cut(s)	747, 1532, 1545
TfiI	GAWTC	1 cut(s)	755
Tru1I	TTAA	7 cut(s)	27, 1647, 1659, 1671, 1718, 1868, 1941
Tru9I	TTAA	7 cut(s)	27, 1647, 1659, 1671, 1718, 1868, 1941
TscAI	CASTG	1 cut(s)	497
TseI	GCWGC	3 cut(s)	130, 620, 1069
TspDTI	ATGAA	6 cut(s)	17, 69, 677, 1619, 1764, 1818
TspGWI	ACGGA	5 cut(s)	204, 346, 1015, 1103, 1117
TspMI	CCCGGG	1 cut(s)	403
TspRI	CASTG	1 cut(s)	497
Van91I	CCANNNNNTGG	2 cut(s)	205, 1153
VpaK11BI	GGWCC	6 cut(s)	250, 478, 552, 739, 1023, 1111
VspI	ATTAAT	2 cut(s)	1659, 1718
XapI	RAATTY	7 cut(s)	29, 67, 773, 967, 1773, 1825, 1927
XbaI	TCTAGA	1 cut(s)	1681
XceI	RCATGY	2 cut(s)	238, 1740
XcmI	CCANNNNNNNNNTGG	3 cut(s)	489, 517, 967
XmaI	CCCGGG	1 cut(s)	403
XspI	CTAG	3 cut(s)	266, 563, 1682

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.