Rroxscaffold_5G00378220

UDP-glycosyltransferase 89A2-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
58701556 .. 58702865
1310 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00378220.1

Sequence Viewer

Length: 1221 bp
ATGTCGATCTCCGGCGACCAAACCCACCGCCACCCTCACATCCTAGTCTACCCTTACCCTGCACAAGGCCACATGCTACCACTCCTCGACCTAACCAACCAACTAGCCCTCCGTGCCCTCACCATAACAATCGTCATCACCCCCAAAAACCTCCCAACCCTCACGCCACTCCTCTCCGCCCACCCCTCAATCCAAACCCTCGTCCTCCCATTTCCTTCACACCCCAAAATACCCCCCGGCGTCGAAAACATCAAGGACATCGGCACCCACGGCAACCTCGCGGTCATCAACGCCCTCGCCAACCTCCACGACCCGATCATCCAGTGGTTCAAAATAACCTTCTTCTCGTCCGGAGCTTTCTTGGCCTCGATTCAAGAGTACTGTTGGCGAAACCTAGATCTGGTCCAGTCGTCGTCGCTTATTGACTTCCCCTATGTTCCTCGGTCGCCCTCGTTGAAAAAGGAGCACGTGCCGTCGATTGTGTTGGCTCACAGAGGAACGGATCCCGAGTCTGAGCTCCTGCGGGTTTCCATGCTTGCCAATACCGACAGTTGGGGCTGTGTTTTCAATTCCTTTCAGGACTTGGAGGGTGAGTATTTGGATCACTTGAAGAGAAGAATGGGCCACAATCGGGTTTACAGTGTCGGCCCATTGAGTCTGATTGATGCCGGGGATGGTCGTTTGGATCGGGGAAACCTGAACACGGGTTCCGGTGGCGATGTCATGGCGTGGCTTGACGGGTGTCCCGATGGGTCTGTGCTGTACGTTTGTTTTGGGAGTCAAAAGTTGTTGAATAGTAAACAAATGGAGGCGTTGGCAAGTGGGCTCGAGCGGAGCTCGGTGAGATTTGTGTGGGCTGTGAAAACGAGCTCGGCCCAAGAAGCGAAGGACGGGTACGGTGTGGTGCCCGAGGGGTTTGAGAAGCGGGTTGCCGGTCGGGGATGGCTGGTGAAAGGTTGGGCGCCGCAGGTGTTGATATTGGGTCACCGGGCCGTGGGCGGATTCGTGAGCCATTGCGGGTGGAACTCGGTGCTCGAAGCGATAGTGGGTGGGGTTTTGATATTGGGCTGGCCCATGGAGGCGGACCAGTTTGTGAATGTCAAGCTGCTGGTGGAGGACATGGGGTGTGGCCGTACAAGTGTGCGAGGGTGCGAGTGGTGTACCCGACCCGGCCCAATTAGGAAAGGTAATTGCCGAGTCACTAAGCGGCGACTCAGCTGA
Functional Annotation

Protein Analysis

406

Amino Acids

44.54

Weight (kDa)

8.53

Isoelectric Point (pI)

36.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 252 - 376 2.4e-15 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 958
Acc36I ACCTGC 1 cut(s) 958
AccB1I GGYRCC 3 cut(s) 263, 904, 961
AccBSI CCGCTC 1 cut(s) 832
AccI GTMKAC 1 cut(s) 48
AccII CGCG 1 cut(s) 281
AccIII TCCGGA 1 cut(s) 350
AclWI GGATC 4 cut(s) 497, 510, 609, 693
AcoI YGGCCR 1 cut(s) 1129
AcvI CACGTG 1 cut(s) 469
AcyI GRCGYC 2 cut(s) 240, 962
AfaI GTAC 5 cut(s) 380, 764, 896, 1135, 1162
AfiI CCNNNNNNNGG 6 cut(s) 65, 400, 552, 631, 703, 994
AgsI TTSAA 6 cut(s) 331, 374, 457, 568, 610, 793
AloI GAACNNNNNNTCC 2 cut(s) 692, 724
AluBI AGCT 6 cut(s) 356, 517, 837, 870, 1105, 1218
AluI AGCT 6 cut(s) 356, 517, 837, 870, 1105, 1218
Alw21I GWGCWC 5 cut(s) 468, 519, 839, 872, 1035
AlwI GGATC 4 cut(s) 497, 510, 609, 693
Ama87I CYCGRG 3 cut(s) 506, 827, 908
Aor13HI TCCGGA 1 cut(s) 350
AoxI GGCC 9 cut(s) 67, 363, 622, 646, 873, 990, 1070, 1129, 1171
ApeKI GCWGC 1 cut(s) 1105
AspLEI GCGC 1 cut(s) 964
AspS9I GGNCC 8 cut(s) 403, 622, 647, 874, 990, 1071, 1084, 1172
AsuC2I CCSGG 4 cut(s) 237, 670, 989, 1170
AsuHPI GGTGA 6 cut(s) 112, 130, 602, 853, 961, 977
AvaI CYCGRG 3 cut(s) 506, 827, 908
AvaII GGWCC 2 cut(s) 403, 1084
BaeGI GKGCMC 2 cut(s) 118, 909
BamHI GGATCC 1 cut(s) 502
BanI GGYRCC 3 cut(s) 263, 904, 961
BanII GRGCYC 4 cut(s) 519, 828, 839, 872
BarI GAAGNNNNNNTAC 2 cut(s) 878, 910
BbrPI CACGTG 1 cut(s) 469
Bbv12I GWGCWC 5 cut(s) 468, 519, 839, 872, 1035
BbvI GCAGC 1 cut(s) 1092
BccI CCATC 3 cut(s) 668, 743, 936
BceAI ACGGC 4 cut(s) 286, 457, 977, 1116
BcnI CCSGG 4 cut(s) 237, 670, 989, 1170
BfaI CTAG 3 cut(s) 44, 104, 395
BfoI RGCGCY 1 cut(s) 965
BfuAI ACCTGC 1 cut(s) 958
BglII AGATCT 1 cut(s) 397
BisI GCNGC 3 cut(s) 965, 1106, 1208
BlsI GCNGC 3 cut(s) 966, 1107, 1209
BmcAI AGTACT 1 cut(s) 380
Bme1390I CCNGG 4 cut(s) 237, 670, 989, 1170
Bme18I GGWCC 2 cut(s) 403, 1084
BmeT110I CYCGRG 3 cut(s) 506, 827, 908
BmgT120I GGNCC 8 cut(s) 403, 622, 647, 874, 990, 1071, 1084, 1172
BmiI GGNNCC 5 cut(s) 265, 504, 709, 906, 963
BmrFI CCNGG 4 cut(s) 237, 670, 989, 1170
BmsI GCATC 1 cut(s) 655
BoxI GACNNNNGTC 1 cut(s) 741
BplI GAGNNNNNCTC 2 cut(s) 821, 853
BpuMI CCSGG 4 cut(s) 237, 670, 989, 1170
BsaAI YACGTR 1 cut(s) 469
BsaHI GRCGYC 2 cut(s) 240, 962
BsaJI CCNNGG 7 cut(s) 235, 268, 440, 669, 909, 993, 1074
BsaWI WCCGGW 2 cut(s) 350, 710
BsaXI ACNNNNNCTCC 4 cut(s) 93, 123, 578, 608
Bsc4I CCNNNNNNNGG 6 cut(s) 65, 400, 552, 631, 703, 994
Bse118I RCCGGY 1 cut(s) 932
Bse1I ACTGG 3 cut(s) 322, 406, 1087
Bse3DI GCAATG 1 cut(s) 1012
BseAI TCCGGA 1 cut(s) 350
BseDI CCNNGG 7 cut(s) 235, 268, 440, 669, 909, 993, 1074
BseGI GGATG 4 cut(s) 39, 318, 679, 947
BseLI CCNNNNNNNGG 6 cut(s) 65, 400, 552, 631, 703, 994
BseMI GCAATG 1 cut(s) 1012
BseMII CTCAG 1 cut(s) 504
BseNI ACTGG 3 cut(s) 322, 406, 1087
BseRI GAGGAG 2 cut(s) 74, 161
BseSI GKGCMC 2 cut(s) 118, 909
BseXI GCAGC 1 cut(s) 1092
BsgI GTGCAG 1 cut(s) 45
Bsh1236I CGCG 1 cut(s) 281
Bsh1285I CGRYCG 2 cut(s) 446, 937
BshFI GGCC 9 cut(s) 69, 365, 624, 648, 875, 992, 1072, 1131, 1173
BshNI GGYRCC 3 cut(s) 263, 904, 961
BsiEI CGRYCG 2 cut(s) 446, 937
BsiHKAI GWGCWC 5 cut(s) 468, 519, 839, 872, 1035
BsiHKCI CYCGRG 3 cut(s) 506, 827, 908
BsiSI CCGG 8 cut(s) 12, 237, 351, 669, 711, 933, 988, 1170
BslFI GGGAC 1 cut(s) 729
BslI CCNNNNNNNGG 6 cut(s) 65, 400, 552, 631, 703, 994
BsmFI GGGAC 1 cut(s) 729
BsnI GGCC 9 cut(s) 69, 365, 624, 648, 875, 992, 1072, 1131, 1173
BsoBI CYCGRG 3 cut(s) 506, 827, 908
Bsp1286I GDGCHC 8 cut(s) 118, 468, 519, 828, 839, 872, 909, 1035
Bsp13I TCCGGA 1 cut(s) 350
Bsp143I GATC 6 cut(s) 6, 315, 397, 502, 601, 685
Bsp19I CCATGG 1 cut(s) 1074
BspANI GGCC 9 cut(s) 69, 365, 624, 648, 875, 992, 1072, 1131, 1173
BspCNI CTCAG 1 cut(s) 505
BspEI TCCGGA 1 cut(s) 350
BspFNI CGCG 1 cut(s) 281
BspLI GGNNCC 5 cut(s) 265, 504, 709, 906, 963
BspMI ACCTGC 1 cut(s) 958
BspPI GGATC 4 cut(s) 497, 510, 609, 693
BspT107I GGYRCC 3 cut(s) 263, 904, 961
BsrBI CCGCTC 1 cut(s) 832
BsrDI GCAATG 1 cut(s) 1012
BsrFI RCCGGY 1 cut(s) 932
BsrI ACTGG 3 cut(s) 322, 406, 1087
BssAI RCCGGY 1 cut(s) 932
BssECI CCNNGG 7 cut(s) 235, 268, 440, 669, 909, 993, 1074
BssMI GATC 6 cut(s) 6, 315, 397, 502, 601, 685
BssNI GRCGYC 2 cut(s) 240, 962
BssT1I CCWWGG 1 cut(s) 1074
Bst4CI ACNGT 4 cut(s) 383, 551, 641, 899
Bst6I CTCTTC 1 cut(s) 605
BstACI GRCGYC 2 cut(s) 240, 962
BstBAI YACGTR 1 cut(s) 469
BstC8I GCNNGC 2 cut(s) 537, 1070
BstDEI CTNAG 3 cut(s) 513, 1203, 1214
BstDSI CCRYGG 3 cut(s) 268, 993, 1074
BstEII GGTNACC 1 cut(s) 983
BstENI CCTNNNNNAGG 1 cut(s) 63
BstF5I GGATG 4 cut(s) 39, 318, 679, 947
BstFNI CGCG 1 cut(s) 281
BstH2I RGCGCY 1 cut(s) 965
BstHHI GCGC 1 cut(s) 964
BstKTI GATC 6 cut(s) 9, 318, 400, 505, 604, 688
BstMBI GATC 6 cut(s) 6, 315, 397, 502, 601, 685
BstMCI CGRYCG 2 cut(s) 446, 937
BstMWI GCNNNNNNNGC 4 cut(s) 113, 270, 362, 881
BstNSI RCATGY 1 cut(s) 76
BstPAI GACNNNNGTC 1 cut(s) 741
BstPI GGTNACC 1 cut(s) 983
BstSCI CCNGG 4 cut(s) 235, 668, 987, 1168
BstSLI GKGCMC 2 cut(s) 118, 909
BstUI CGCG 1 cut(s) 281
BstV1I GCAGC 1 cut(s) 1092
BstX2I RGATCY 2 cut(s) 397, 502
BstYI RGATCY 2 cut(s) 397, 502
BsuRI GGCC 9 cut(s) 69, 365, 624, 648, 875, 992, 1072, 1131, 1173
BtgI CCRYGG 3 cut(s) 268, 993, 1074
BtgZI GCGATG 1 cut(s) 732
BtsCI GGATG 4 cut(s) 39, 318, 679, 947
BtsIMutI CAGTG 2 cut(s) 329, 646
BveI ACCTGC 1 cut(s) 958
Cac8I GCNNGC 2 cut(s) 537, 1070
CfoI GCGC 1 cut(s) 964
Cfr10I RCCGGY 1 cut(s) 932
Cfr13I GGNCC 8 cut(s) 403, 622, 647, 874, 990, 1071, 1084, 1172
CseI GACGC 1 cut(s) 229
Csp6I GTAC 5 cut(s) 379, 763, 895, 1134, 1161
CviAII CATG 5 cut(s) 73, 532, 724, 1075, 1120
CviQI GTAC 5 cut(s) 379, 763, 895, 1134, 1161
DdeI CTNAG 3 cut(s) 513, 1203, 1214
DinI GGCGCC 1 cut(s) 963
DpnI GATC 6 cut(s) 8, 317, 399, 504, 603, 687
DpnII GATC 6 cut(s) 6, 315, 397, 502, 601, 685
EaeI YGGCCR 1 cut(s) 1129
Eam1104I CTCTTC 1 cut(s) 605
EarI CTCTTC 1 cut(s) 605
EciI GGCGGA 3 cut(s) 166, 1014, 1097
Ecl136II GAGCTC 3 cut(s) 517, 837, 870
Eco130I CCWWGG 1 cut(s) 1074
Eco24I GRGCYC 4 cut(s) 519, 828, 839, 872
Eco47I GGWCC 2 cut(s) 403, 1084
Eco53kI GAGCTC 3 cut(s) 517, 837, 870
Eco72I CACGTG 1 cut(s) 469
Eco88I CYCGRG 3 cut(s) 506, 827, 908
Eco91I GGTNACC 1 cut(s) 983
EcoICRI GAGCTC 3 cut(s) 517, 837, 870
EcoNI CCTNNNNNAGG 1 cut(s) 63
EcoO65I GGTNACC 1 cut(s) 983
EcoT14I CCWWGG 1 cut(s) 1074
EcoT38I GRGCYC 4 cut(s) 519, 828, 839, 872
EgeI GGCGCC 1 cut(s) 963
EheI GGCGCC 1 cut(s) 963
ErhI CCWWGG 1 cut(s) 1074
FaeI CATG 5 cut(s) 76, 535, 727, 1078, 1123
FaiI YATR 7 cut(s) 74, 125, 435, 533, 725, 1076, 1121
FaqI GGGAC 1 cut(s) 729
FatI CATG 5 cut(s) 72, 531, 723, 1074, 1119
FauI CCCGC 3 cut(s) 516, 918, 1010
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 3 cut(s) 965, 1106, 1208
FokI GGATG 4 cut(s) 26, 305, 686, 954
FriOI GRGCYC 4 cut(s) 519, 828, 839, 872
Fsp4HI GCNGC 3 cut(s) 965, 1106, 1208
FspBI CTAG 3 cut(s) 44, 104, 395
GlaI GCGC 1 cut(s) 963
GluI GCNGC 3 cut(s) 965, 1106, 1208
HaeII RGCGCY 1 cut(s) 965
HaeIII GGCC 9 cut(s) 69, 365, 624, 648, 875, 992, 1072, 1131, 1173
HapII CCGG 8 cut(s) 12, 237, 351, 669, 711, 933, 988, 1170
HgaI GACGC 1 cut(s) 229
HhaI GCGC 1 cut(s) 964
Hin1I GRCGYC 2 cut(s) 240, 962
Hin1II CATG 5 cut(s) 76, 535, 727, 1078, 1123
Hin6I GCGC 1 cut(s) 962
HinP1I GCGC 1 cut(s) 962
HinfI GANTC 7 cut(s) 370, 509, 655, 778, 1002, 1197, 1212
HpaII CCGG 8 cut(s) 12, 237, 351, 669, 711, 933, 988, 1170
HphI GGTGA 6 cut(s) 112, 130, 602, 853, 961, 977
Hpy166II GTNNAC 4 cut(s) 49, 637, 800, 1161
Hpy188I TCNGA 2 cut(s) 514, 660
Hpy188III TCNNGA 6 cut(s) 351, 374, 506, 578, 746, 1006
Hpy8I GTNNAC 4 cut(s) 49, 637, 800, 1161
Hpy99I CGWCG 4 cut(s) 245, 415, 418, 478
HpyAV CCTTC 3 cut(s) 225, 349, 880
HpyCH4III ACNGT 4 cut(s) 383, 551, 641, 899
HpyCH4IV ACGT 2 cut(s) 468, 765
HpyCH4V TGCA 1 cut(s) 62
HpyF10VI GCNNNNNNNGC 4 cut(s) 113, 270, 362, 881
HpyF3I CTNAG 3 cut(s) 513, 1203, 1214
HpySE526I ACGT 2 cut(s) 468, 765
Hsp92I GRCGYC 2 cut(s) 240, 962
Hsp92II CATG 5 cut(s) 76, 535, 727, 1078, 1123
HspAI GCGC 1 cut(s) 962
KasI GGCGCC 1 cut(s) 961
Kpn2I TCCGGA 1 cut(s) 350
Kzo9I GATC 6 cut(s) 6, 315, 397, 502, 601, 685
LmnI GCTCC 4 cut(s) 353, 463, 522, 834
Lsp1109I GCAGC 1 cut(s) 1092
LweI GCATC 1 cut(s) 655
MaeI CTAG 3 cut(s) 44, 104, 395
MaeII ACGT 2 cut(s) 468, 765
MaeIII GTNAC 2 cut(s) 983, 1198
MalI GATC 6 cut(s) 8, 317, 399, 504, 603, 687
MbiI CCGCTC 1 cut(s) 832
MboI GATC 6 cut(s) 6, 315, 397, 502, 601, 685
MboII GAAGA 3 cut(s) 334, 622, 627
MflI RGATCY 2 cut(s) 397, 502
MhlI GDGCHC 8 cut(s) 118, 468, 519, 828, 839, 872, 909, 1035
MluCI AATT 3 cut(s) 568, 1176, 1189
Mly113I GGCGCC 1 cut(s) 962
MlyI GAGTC 5 cut(s) 518, 664, 787, 1206, 1206
MroI TCCGGA 1 cut(s) 350
MspA1I CMGCKG 1 cut(s) 1218
MspI CCGG 8 cut(s) 12, 237, 351, 669, 711, 933, 988, 1170
MspR9I CCNGG 4 cut(s) 237, 670, 989, 1170
MvnI CGCG 1 cut(s) 281
MwoI GCNNNNNNNGC 4 cut(s) 113, 270, 362, 881
NarI GGCGCC 1 cut(s) 962
NciI CCSGG 4 cut(s) 237, 670, 989, 1170
NcoI CCATGG 1 cut(s) 1074
NdeII GATC 6 cut(s) 6, 315, 397, 502, 601, 685
NlaIII CATG 5 cut(s) 76, 535, 727, 1078, 1123
NlaIV GGNNCC 5 cut(s) 265, 504, 709, 906, 963
NmeAIII GCCGAG 2 cut(s) 851, 1220
NmuCI GTSAC 2 cut(s) 983, 1198
NspI RCATGY 1 cut(s) 76
PaeR7I CTCGAG 1 cut(s) 827
PaqCI CACCTGC 1 cut(s) 958
PcsI WCGNNNNNNNCGW 1 cut(s) 744
PfeI GAWTC 2 cut(s) 370, 1002
PkrI GCNGC 3 cut(s) 966, 1107, 1209
PleI GAGTC 5 cut(s) 517, 663, 786, 1205, 1206
PluTI GGCGCC 1 cut(s) 965
PmaCI CACGTG 1 cut(s) 469
PmlI CACGTG 1 cut(s) 469
PpsI GAGTC 5 cut(s) 517, 663, 786, 1205, 1206
Ppu21I YACGTR 1 cut(s) 469
PshAI GACNNNNGTC 1 cut(s) 741
Psp124BI GAGCTC 3 cut(s) 519, 839, 872
PspCI CACGTG 1 cut(s) 469
PspEI GGTNACC 1 cut(s) 983
PspN4I GGNNCC 5 cut(s) 265, 504, 709, 906, 963
PspPI GGNCC 8 cut(s) 403, 622, 647, 874, 990, 1071, 1084, 1172
PspXI VCTCGAGB 1 cut(s) 827
PsuI RGATCY 2 cut(s) 397, 502
PvuII CAGCTG 1 cut(s) 1218
RsaI GTAC 5 cut(s) 380, 764, 896, 1135, 1162
RsaNI GTAC 5 cut(s) 379, 763, 895, 1134, 1161
SacI GAGCTC 3 cut(s) 519, 839, 872
SatI GCNGC 3 cut(s) 965, 1106, 1208
Sau3AI GATC 6 cut(s) 6, 315, 397, 502, 601, 685
Sau96I GGNCC 8 cut(s) 403, 622, 647, 874, 990, 1071, 1084, 1172
ScaI AGTACT 1 cut(s) 380
SchI GAGTC 5 cut(s) 518, 664, 787, 1206, 1206
ScrFI CCNGG 4 cut(s) 237, 670, 989, 1170
SduI GDGCHC 8 cut(s) 118, 468, 519, 828, 839, 872, 909, 1035
SfaNI GCATC 1 cut(s) 655
SfoI GGCGCC 1 cut(s) 963
Sfr274I CTCGAG 1 cut(s) 827
SinI GGWCC 2 cut(s) 403, 1084
SlaI CTCGAG 1 cut(s) 827
SmlI CTYRAG 1 cut(s) 827
SmoI CTYRAG 1 cut(s) 827
Sse9I AATT 3 cut(s) 568, 1176, 1189
SspDI GGCGCC 1 cut(s) 961
SspMI CTAG 3 cut(s) 44, 104, 395
SstI GAGCTC 3 cut(s) 519, 839, 872
StyD4I CCNGG 4 cut(s) 235, 668, 987, 1168
StyI CCWWGG 1 cut(s) 1074
TaaI ACNGT 4 cut(s) 383, 551, 641, 899
TaiI ACGT 2 cut(s) 471, 768
TaqI TCGA 7 cut(s) 5, 87, 243, 368, 476, 828, 1035
TaqII GACCGA 1 cut(s) 432
TasI AATT 3 cut(s) 568, 1176, 1189
TatI WGTACW 1 cut(s) 378
TauI GCSGC 2 cut(s) 967, 1210
TfiI GAWTC 2 cut(s) 370, 1002
TscAI CASTG 2 cut(s) 329, 646
TseFI GTSAC 2 cut(s) 983, 1198
TseI GCWGC 1 cut(s) 1105
Tsp45I GTSAC 2 cut(s) 983, 1198
TspGWI ACGGA 2 cut(s) 101, 515
TspRI CASTG 2 cut(s) 329, 646
VpaK11BI GGWCC 2 cut(s) 403, 1084
XagI CCTNNNNNAGG 1 cut(s) 63
XceI RCATGY 1 cut(s) 76
XhoI CTCGAG 1 cut(s) 827
XmiI GTMKAC 1 cut(s) 48
XspI CTAG 3 cut(s) 44, 104, 395
ZrmI AGTACT 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.