Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0003168

Physical Location & Seq

Genomic Coordinates Forward (+)

3051798 .. 3053571

Gene Structure 1774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g04740.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGTCCGCGAGAACCCACATCTTAGTCTTTCCCTACCCTGCGCAAGGGCACATGCTCCCTCTCCTCGACCTTGCCCACCAGCTCCTCCTCCGCGGCATCATCGTAACCGTCTTGGTCACCCCCAAAAACCTCCCAGCCCTAACTCCGCTCCTCTCAGCCAACCCCTCCTCCTCCGTCCAAACCCTAGTCCTCCCATTCCCTGCTCACCCCAAAATACCACCGGGTGTTGAGAACGTCAAGGATATTGGCCCCCGGGGCAACTTCGCCATTATCGACGCCCTCACCAACCTCCACGAGCCCATCGTCCACTGGTTCAACGCCCACCCCAACCCCCCTACAGCCATCATCTCCGACTTCTTCCTCGGCTGGACCTTGCCCCTGGCCCGTCAGCTAGGAATCCGCAGAATCACTTTCTACTCTTCTGGTGCTTTCTTGGCATCTATTGCAGATCACTGCTGGCGTAATTTAGATGTCATCAAGTCATCTCTAGCTGAATTTCCTGATAATCCTCGATCACCCTCTTTCAAAGCAGAGCATTTGCCTCCCCTGCCCCTCCGCTACAGAGAATCGGAGCCCGACTCAGAGCGTTTGAGGAATGGCATGCTTGCCAATACCGAAAGTTGGGGATGCATTTTCAGTAGCTTTCATGAGTTGGAAGGAGAGTATTTGCAACACTTGAGGACAAAAATGGGCCATCCCCGTGTTTACGGAGTTGGCCCATTGAGCCTACTTGCTTCCGCCGCTAATGGCAGAAACTTGGAACGGGCCAACCCGAACACAGACACGAGGAAGGATAACGTGCTCGCATGGCTTGATGGGTGCCCGGATGGGTCTGTGCTGTATGTTTGCTTTGGAAGTCAGACGTTGCTCAATAAGCAGCAGATGGATGCCTTGGCTTCTGGGCTGGAACAGAGTGGGGCTCGGTTTGTGTGGGTTGTGAAATCGGGCTTGTCCGGGAAGGTGAATGATGGGTCCGGAGTTTTACCAGATGGGTTTGAGGAAAGGGTTTCTGGGAGGGGATTGCTGATAAAGGGCTGGGCGCCGCAGGTGGTGATCCTCGGCCACCGGGCGGTTGGAGGGTTTCTCAGCCACTGCGGGTGGAACTCTGTGCTGGAAGGGATTGCGGGTGGGGTTTTGATATTGAGCTGGCCTATGCAGGCTGACCAGTTTGTAAATGCCAAGCTATTGGTTGAGTACATGGGCGTGGCCGTGAAGGTGTGTGAGGGTGCCAATGGGGTACCTGACTCGGCCGAGCTGGGAAAGTCAATTGCTGAGTCAATGAGTGGGGAATCACCTGAGAAGGTGAGAGCGAAGGAACTGAGGGACAAGGCAGTTGCGGCTGTGGGAGATGGTGGGAGCTCTTCAAAGGATTTGGACGAGCTTGTGAAAGAGTTGGATCGAATTAAAGTGAGGCAGGAGAGCATGATGATAAATTTACCTTACAGAAGCAAATGGAGTGGTGCATTCTTTGAAACTCACTTCAAGAAACTAACCTCCATAAGAACTCAAGGAAGGAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

507

Amino Acids

55.25

Weight (kDa)

8.15

Isoelectric Point (pI)

33.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003168)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G51210 AT5G03490
fragaria_vesca	FvH4_4g29060 FvH4_4g29061
malus_domestica	MD16G1054300.v1.1 MD16G1054500.v1.1 MD16G1054600.v1.1
prunus_persica	Prupe.1G295300_v2.0.a1
pyrus_communis	pycom16g04730 pycom16g04740 pycom16g04750
rosa_chinensis	RchiOBHm_Chr4g0437141 RchiOBHm_Chr4g0437161
rosa_laevigata	RLG00000006459 RLG00000006463 RLG00000006464 RLG00000009364
rosa_multiflora	Rmu_co8368091.1_g000001 Rmu_sc0000591.1_g000008 Rmu_sc0000591.1_g000012 Rmu_sc0017900.1_g000001 Rmu_sc0017900.1_g000006 Rmu_ssc0000006.1_g000001
rosa_roxburghii	Rroxscaffold_5G00378220 Rroxscaffold_5G00378300
rosa_rugosa	Rorug04G0298300 Rorug04G0298400.1
rosa_samantha	Rh4AG353300 Rh4BG362900 Rh4BG363000 Rh4BG363200 Rh4CG377100 Rh4CG377300 Rh4DG356800 Rh4DG357000
rosa_wichuraiana	Rw4G030950 Rw4G030960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1036
Acc16I	TGCGCA	1 cut(s)	42
Acc36I	ACCTGC	1 cut(s)	1036
Acc65I	GGTACC	1 cut(s)	1237
AccB1I	GGYRCC	4 cut(s)	819, 1039, 1226, 1237
AccBSI	CCGCTC	1 cut(s)	148
AccII	CGCG	2 cut(s)	8, 93
AccIII	TCCGGA	1 cut(s)	974
AclWI	GGATC	2 cut(s)	1048, 1404
AcoI	YGGCCR	3 cut(s)	1060, 1206, 1248
AcsI	RAATTY	2 cut(s)	494, 1432
AcyI	GRCGYC	2 cut(s)	276, 1040
AdeI	CACNNNGTG	1 cut(s)	224
AfaI	GTAC	2 cut(s)	1196, 1239
AfiI	CCNNNNNNNGG	3 cut(s)	44, 621, 1069
AgsI	TTSAA	5 cut(s)	316, 526, 1365, 1472, 1483
AjnI	CCWGG	1 cut(s)	378
AluBI	AGCT	9 cut(s)	82, 391, 491, 642, 1146, 1183, 1255, 1359, 1381
AluI	AGCT	9 cut(s)	82, 391, 491, 642, 1146, 1183, 1255, 1359, 1381
Alw21I	GWGCWC	2 cut(s)	804, 1361
AlwI	GGATC	2 cut(s)	1048, 1404
AlwNI	CAGNNNCTG	1 cut(s)	1092
Ama87I	CYCGRG	1 cut(s)	252
Aor13HI	TCCGGA	1 cut(s)	974
AoxI	GGCC	9 cut(s)	247, 381, 691, 715, 765, 1060, 1148, 1206, 1248
ApeKI	GCWGC	1 cut(s)	877
ApoI	RAATTY	2 cut(s)	494, 1432
Asp718I	GGTACC	1 cut(s)	1237
AspLEI	GCGC	2 cut(s)	43, 1042
AspS9I	GGNCC	7 cut(s)	248, 369, 382, 691, 716, 765, 972
AsuC2I	CCSGG	6 cut(s)	222, 253, 254, 824, 955, 1067
AsuHPI	GGTGA	8 cut(s)	109, 197, 274, 507, 973, 1063, 1284, 1315
AvaI	CYCGRG	1 cut(s)	252
AvaII	GGWCC	2 cut(s)	369, 972
BaeGI	GKGCMC	2 cut(s)	51, 824
BanI	GGYRCC	4 cut(s)	819, 1039, 1226, 1237
BanII	GRGCYC	4 cut(s)	300, 576, 922, 1361
BauI	CACGAG	2 cut(s)	293, 784
Bbv12I	GWGCWC	2 cut(s)	804, 1361
BbvI	GCAGC	1 cut(s)	889
BccI	CCATC	9 cut(s)	308, 350, 702, 809, 821, 877, 962, 983, 1343
BceAI	ACGGC	1 cut(s)	1193
BciT130I	CCWGG	1 cut(s)	380
BcnI	CCSGG	6 cut(s)	222, 253, 254, 824, 955, 1067
BfaI	CTAG	4 cut(s)	185, 392, 488, 1519
BfmI	CTRYAG	2 cut(s)	336, 559
BfoI	RGCGCY	1 cut(s)	1043
BfuAI	ACCTGC	1 cut(s)	1036
BglI	GCCNNNNNGGC	1 cut(s)	255
BisI	GCNGC	5 cut(s)	94, 741, 878, 1043, 1338
BlsI	GCNGC	5 cut(s)	95, 742, 879, 1044, 1339
Bme1390I	CCNGG	7 cut(s)	222, 253, 254, 380, 824, 955, 1067
Bme18I	GGWCC	2 cut(s)	369, 972
BmeT110I	CYCGRG	1 cut(s)	252
BmgT120I	GGNCC	7 cut(s)	248, 369, 382, 691, 716, 765, 972
BmiI	GGNNCC	7 cut(s)	250, 573, 821, 973, 1041, 1228, 1239
BmrFI	CCNGG	7 cut(s)	222, 253, 254, 380, 824, 955, 1067
BmsI	GCATC	4 cut(s)	105, 446, 617, 877
BplI	GAGNNNNNCTC	6 cut(s)	563, 595, 904, 936, 1068, 1100
BpuEI	CTTGAG	2 cut(s)	697, 1491
BpuMI	CCSGG	6 cut(s)	222, 253, 254, 824, 955, 1067
BsaHI	GRCGYC	2 cut(s)	276, 1040
BsaJI	CCNNGG	8 cut(s)	91, 251, 252, 253, 361, 378, 891, 1057
BsaWI	WCCGGW	1 cut(s)	974
BsaXI	ACNNNNNCTCC	2 cut(s)	152, 182
Bsc4I	CCNNNNNNNGG	3 cut(s)	44, 621, 1069
Bse1I	ACTGG	2 cut(s)	314, 1165
BseAI	TCCGGA	1 cut(s)	974
BseBI	CCWGG	1 cut(s)	380
BseDI	CCNNGG	8 cut(s)	91, 251, 252, 253, 361, 378, 891, 1057
BseGI	GGATG	4 cut(s)	632, 694, 832, 892
BseLI	CCNNNNNNNGG	3 cut(s)	44, 621, 1069
BseMII	CTCAG	6 cut(s)	168, 594, 1099, 1263, 1287, 1310
BseNI	ACTGG	2 cut(s)	314, 1165
BseRI	GAGGAG	6 cut(s)	53, 74, 77, 140, 157, 160
BseSI	GKGCMC	2 cut(s)	51, 824
BseX3I	CGGCCG	1 cut(s)	1248
BseXI	GCAGC	1 cut(s)	889
BseYI	CCCAGC	3 cut(s)	133, 1035, 1255
Bsh1236I	CGCG	2 cut(s)	8, 93
Bsh1285I	CGRYCG	1 cut(s)	1251
BshFI	GGCC	9 cut(s)	249, 383, 693, 717, 767, 1062, 1150, 1208, 1250
BshNI	GGYRCC	4 cut(s)	819, 1039, 1226, 1237
BsiEI	CGRYCG	1 cut(s)	1251
BsiHKAI	GWGCWC	2 cut(s)	804, 1361
BsiHKCI	CYCGRG	1 cut(s)	252
BsiSI	CCGG	6 cut(s)	221, 253, 824, 954, 975, 1066
BslFI	GGGAC	1 cut(s)	1337
BslI	CCNNNNNNNGG	3 cut(s)	44, 621, 1069
BsmFI	GGGAC	1 cut(s)	1337
BsmI	GAATGC	1 cut(s)	1463
BsnI	GGCC	9 cut(s)	249, 383, 693, 717, 767, 1062, 1150, 1208, 1250
BsoBI	CYCGRG	1 cut(s)	252
Bsp1286I	GDGCHC	7 cut(s)	51, 300, 576, 804, 824, 922, 1361
Bsp13I	TCCGGA	1 cut(s)	974
Bsp143I	GATC	4 cut(s)	448, 512, 1053, 1396
BspANI	GGCC	9 cut(s)	249, 383, 693, 717, 767, 1062, 1150, 1208, 1250
BspCNI	CTCAG	6 cut(s)	167, 593, 1098, 1264, 1288, 1311
BspEI	TCCGGA	1 cut(s)	974
BspFNI	CGCG	2 cut(s)	8, 93
BspHI	TCATGA	1 cut(s)	646
BspLI	GGNNCC	7 cut(s)	250, 573, 821, 973, 1041, 1228, 1239
BspMI	ACCTGC	1 cut(s)	1036
BspPI	GGATC	2 cut(s)	1048, 1404
BspQI	GCTCTTC	1 cut(s)	1366
BspT107I	GGYRCC	4 cut(s)	819, 1039, 1226, 1237
BsrBI	CCGCTC	1 cut(s)	148
BsrI	ACTGG	2 cut(s)	314, 1165
BssECI	CCNNGG	8 cut(s)	91, 251, 252, 253, 361, 378, 891, 1057
BssMI	GATC	4 cut(s)	448, 512, 1053, 1396
BssNI	GRCGYC	2 cut(s)	276, 1040
BssSI	CACGAG	2 cut(s)	293, 784
BssT1I	CCWWGG	1 cut(s)	891
Bst2BI	CACGAG	2 cut(s)	293, 784
Bst2UI	CCWGG	1 cut(s)	380
Bst4CI	ACNGT	1 cut(s)	109
Bst6I	CTCTTC	2 cut(s)	424, 1366
BstACI	GRCGYC	2 cut(s)	276, 1040
BstAPI	GCANNNNNTGC	1 cut(s)	443
BstC8I	GCNNGC	6 cut(s)	458, 602, 606, 804, 1148, 1158
BstDEI	CTNAG	7 cut(s)	22, 154, 580, 1085, 1272, 1296, 1319
BstDSI	CCRYGG	1 cut(s)	91
BstEII	GGTNACC	1 cut(s)	115
BstENI	CCTNNNNNAGG	1 cut(s)	42
BstF5I	GGATG	4 cut(s)	632, 694, 832, 892
BstFNI	CGCG	2 cut(s)	8, 93
BstH2I	RGCGCY	1 cut(s)	1043
BstHHI	GCGC	2 cut(s)	43, 1042
BstKTI	GATC	4 cut(s)	451, 515, 1056, 1399
BstMBI	GATC	4 cut(s)	448, 512, 1053, 1396
BstMCI	CGRYCG	1 cut(s)	1251
BstMWI	GCNNNNNNNGC	9 cut(s)	255, 434, 443, 547, 723, 740, 808, 874, 1337
BstNI	CCWGG	1 cut(s)	380
BstNSI	RCATGY	2 cut(s)	55, 604
BstPI	GGTNACC	1 cut(s)	115
BstSCI	CCNGG	7 cut(s)	220, 251, 252, 378, 822, 953, 1065
BstSFI	CTRYAG	2 cut(s)	336, 559
BstSLI	GKGCMC	2 cut(s)	51, 824
BstUI	CGCG	2 cut(s)	8, 93
BstV1I	GCAGC	1 cut(s)	889
BstXI	CCANNNNNNTGG	1 cut(s)	1186
BstZI	CGGCCG	1 cut(s)	1248
BsuRI	GGCC	9 cut(s)	249, 383, 693, 717, 767, 1062, 1150, 1208, 1250
BtgI	CCRYGG	1 cut(s)	91
BtsCI	GGATG	4 cut(s)	632, 694, 832, 892
BtsI	GCAGTG	2 cut(s)	451, 1090
BtsIMutI	CAGTG	3 cut(s)	307, 451, 1090
BveI	ACCTGC	1 cut(s)	1036
Cac8I	GCNNGC	6 cut(s)	458, 602, 606, 804, 1148, 1158
CaiI	CAGNNNCTG	1 cut(s)	1092
CciI	TCATGA	1 cut(s)	646
CfoI	GCGC	2 cut(s)	43, 1042
Cfr13I	GGNCC	7 cut(s)	248, 369, 382, 691, 716, 765, 972
Cfr42I	CCGCGG	1 cut(s)	94
Cfr9I	CCCGGG	1 cut(s)	252
CseI	GACGC	1 cut(s)	284
Csp6I	GTAC	2 cut(s)	1195, 1238
CspCI	CAANNNNNGTGG	2 cut(s)	1438, 1473
CviAII	CATG	6 cut(s)	52, 601, 647, 807, 1198, 1423
CviQI	GTAC	2 cut(s)	1195, 1238
DdeI	CTNAG	7 cut(s)	22, 154, 580, 1085, 1272, 1296, 1319
DinI	GGCGCC	1 cut(s)	1041
DpnI	GATC	4 cut(s)	450, 514, 1055, 1398
DpnII	GATC	4 cut(s)	448, 512, 1053, 1396
DraIII	CACNNNGTG	1 cut(s)	224
EaeI	YGGCCR	3 cut(s)	1060, 1206, 1248
EagI	CGGCCG	1 cut(s)	1248
Eam1104I	CTCTTC	2 cut(s)	424, 1366
EarI	CTCTTC	2 cut(s)	424, 1366
EciI	GGCGGA	1 cut(s)	727
Ecl136II	GAGCTC	1 cut(s)	1359
EclXI	CGGCCG	1 cut(s)	1248
Eco130I	CCWWGG	1 cut(s)	891
Eco24I	GRGCYC	4 cut(s)	300, 576, 922, 1361
Eco47I	GGWCC	2 cut(s)	369, 972
Eco52I	CGGCCG	1 cut(s)	1248
Eco53kI	GAGCTC	1 cut(s)	1359
Eco88I	CYCGRG	1 cut(s)	252
Eco91I	GGTNACC	1 cut(s)	115
EcoICRI	GAGCTC	1 cut(s)	1359
EcoNI	CCTNNNNNAGG	1 cut(s)	42
EcoO65I	GGTNACC	1 cut(s)	115
EcoRII	CCWGG	1 cut(s)	378
EcoT14I	CCWWGG	1 cut(s)	891
EcoT22I	ATGCAT	1 cut(s)	632
EcoT38I	GRGCYC	4 cut(s)	300, 576, 922, 1361
EgeI	GGCGCC	1 cut(s)	1041
EheI	GGCGCC	1 cut(s)	1041
ErhI	CCWWGG	1 cut(s)	891
FaeI	CATG	6 cut(s)	55, 604, 650, 810, 1201, 1426
FaiI	YATR	9 cut(s)	53, 602, 648, 808, 843, 1154, 1199, 1424, 1499
FaqI	GGGAC	1 cut(s)	1337
FatI	CATG	6 cut(s)	51, 600, 646, 806, 1197, 1422
FauI	CCCGC	2 cut(s)	1088, 1117
Fnu4HI	GCNGC	5 cut(s)	94, 741, 878, 1043, 1338
FokI	GGATG	4 cut(s)	639, 681, 839, 899
FriOI	GRGCYC	4 cut(s)	300, 576, 922, 1361
Fsp4HI	GCNGC	5 cut(s)	94, 741, 878, 1043, 1338
FspBI	CTAG	4 cut(s)	185, 392, 488, 1519
FspI	TGCGCA	1 cut(s)	42
GlaI	GCGC	2 cut(s)	42, 1041
GluI	GCNGC	5 cut(s)	94, 741, 878, 1043, 1338
GsaI	CCCAGC	3 cut(s)	137, 1039, 1259
HaeII	RGCGCY	1 cut(s)	1043
HaeIII	GGCC	9 cut(s)	249, 383, 693, 717, 767, 1062, 1150, 1208, 1250
HapII	CCGG	6 cut(s)	221, 253, 824, 954, 975, 1066
HgaI	GACGC	1 cut(s)	284
HhaI	GCGC	2 cut(s)	43, 1042
Hin1I	GRCGYC	2 cut(s)	276, 1040
Hin1II	CATG	6 cut(s)	55, 604, 650, 810, 1201, 1426
Hin6I	GCGC	2 cut(s)	41, 1040
HinP1I	GCGC	2 cut(s)	41, 1040
HinfI	GANTC	7 cut(s)	396, 405, 566, 578, 1244, 1274, 1289
HpaII	CCGG	6 cut(s)	221, 253, 824, 954, 975, 1066
HphI	GGTGA	8 cut(s)	109, 197, 274, 507, 973, 1063, 1284, 1315
Hpy166II	GTNNAC	2 cut(s)	307, 706
Hpy188I	TCNGA	4 cut(s)	352, 571, 583, 861
Hpy188III	TCNNGA	4 cut(s)	500, 647, 975, 1483
Hpy8I	GTNNAC	2 cut(s)	307, 706
Hpy99I	CGWCG	1 cut(s)	278
HpyAV	CCTTC	8 cut(s)	650, 784, 952, 1109, 1207, 1294, 1306, 1506
HpyCH4III	ACNGT	1 cut(s)	109
HpyCH4IV	ACGT	3 cut(s)	234, 798, 863
HpyCH4V	TGCA	5 cut(s)	446, 630, 670, 1156, 1463
HpyF10VI	GCNNNNNNNGC	9 cut(s)	255, 434, 443, 547, 723, 740, 808, 874, 1337
HpyF3I	CTNAG	7 cut(s)	22, 154, 580, 1085, 1272, 1296, 1319
HpySE526I	ACGT	3 cut(s)	234, 798, 863
Hsp92I	GRCGYC	2 cut(s)	276, 1040
Hsp92II	CATG	6 cut(s)	55, 604, 650, 810, 1201, 1426
HspAI	GCGC	2 cut(s)	41, 1040
KasI	GGCGCC	1 cut(s)	1039
Kpn2I	TCCGGA	1 cut(s)	974
KpnI	GGTACC	1 cut(s)	1241
KspI	CCGCGG	1 cut(s)	94
Kzo9I	GATC	4 cut(s)	448, 512, 1053, 1396
LguI	GCTCTTC	1 cut(s)	1366
LmnI	GCTCC	5 cut(s)	60, 87, 153, 571, 1356
Lsp1109I	GCAGC	1 cut(s)	889
LweI	GCATC	4 cut(s)	105, 446, 617, 877
MaeI	CTAG	4 cut(s)	185, 392, 488, 1519
MaeII	ACGT	3 cut(s)	234, 798, 863
MaeIII	GTNAC	2 cut(s)	103, 115
MalI	GATC	4 cut(s)	450, 514, 1055, 1398
MbiI	CCGCTC	1 cut(s)	148
MboI	GATC	4 cut(s)	448, 512, 1053, 1396
MboII	GAAGA	3 cut(s)	349, 411, 1353
MfeI	CAATTG	1 cut(s)	1266
MhlI	GDGCHC	7 cut(s)	51, 300, 576, 804, 824, 922, 1361
MluCI	AATT	5 cut(s)	463, 494, 1266, 1401, 1432
Mly113I	GGCGCC	1 cut(s)	1040
MlyI	GAGTC	3 cut(s)	572, 1238, 1283
MmeI	TCCRAC	4 cut(s)	375, 633, 1054, 1374
Mph1103I	ATGCAT	1 cut(s)	632
MroI	TCCGGA	1 cut(s)	974
MseI	TTAA	1 cut(s)	1404
MslI	CAYNNNNRTG	2 cut(s)	699, 1202
MspA1I	CMGCKG	1 cut(s)	93
MspI	CCGG	6 cut(s)	221, 253, 824, 954, 975, 1066
MspR9I	CCNGG	7 cut(s)	222, 253, 254, 380, 824, 955, 1067
MunI	CAATTG	1 cut(s)	1266
Mva1269I	GAATGC	1 cut(s)	1463
MvaI	CCWGG	1 cut(s)	380
MvnI	CGCG	2 cut(s)	8, 93
MwoI	GCNNNNNNNGC	9 cut(s)	255, 434, 443, 547, 723, 740, 808, 874, 1337
NarI	GGCGCC	1 cut(s)	1040
NciI	CCSGG	6 cut(s)	222, 253, 254, 824, 955, 1067
NdeII	GATC	4 cut(s)	448, 512, 1053, 1396
NlaIII	CATG	6 cut(s)	55, 604, 650, 810, 1201, 1426
NlaIV	GGNNCC	7 cut(s)	250, 573, 821, 973, 1041, 1228, 1239
NmeAIII	GCCGAG	4 cut(s)	342, 1038, 1226, 1276
NmuCI	GTSAC	1 cut(s)	115
NsbI	TGCGCA	1 cut(s)	42
NsiI	ATGCAT	1 cut(s)	632
NspI	RCATGY	2 cut(s)	55, 604
PaeI	GCATGC	1 cut(s)	604
PagI	TCATGA	1 cut(s)	646
PaqCI	CACCTGC	1 cut(s)	1036
PciSI	GCTCTTC	1 cut(s)	1366
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 300
PctI	GAATGC	1 cut(s)	1463
PfeI	GAWTC	4 cut(s)	396, 405, 566, 1289
PfoI	TCCNGGA	1 cut(s)	953
PkrI	GCNGC	5 cut(s)	95, 742, 879, 1044, 1339
PleI	GAGTC	3 cut(s)	572, 1238, 1282
PluTI	GGCGCC	1 cut(s)	1043
PpsI	GAGTC	3 cut(s)	572, 1238, 1282
Psp124BI	GAGCTC	1 cut(s)	1361
Psp6I	CCWGG	1 cut(s)	378
PspEI	GGTNACC	1 cut(s)	115
PspFI	CCCAGC	3 cut(s)	133, 1035, 1255
PspGI	CCWGG	1 cut(s)	378
PspN4I	GGNNCC	7 cut(s)	250, 573, 821, 973, 1041, 1228, 1239
PspPI	GGNCC	7 cut(s)	248, 369, 382, 691, 716, 765, 972
PstNI	CAGNNNCTG	1 cut(s)	1092
RsaI	GTAC	2 cut(s)	1196, 1239
RsaNI	GTAC	2 cut(s)	1195, 1238
RseI	CAYNNNNRTG	2 cut(s)	699, 1202
SacI	GAGCTC	1 cut(s)	1361
SacII	CCGCGG	1 cut(s)	94
SapI	GCTCTTC	1 cut(s)	1366
SaqAI	TTAA	1 cut(s)	1404
SatI	GCNGC	5 cut(s)	94, 741, 878, 1043, 1338
Sau3AI	GATC	4 cut(s)	448, 512, 1053, 1396
Sau96I	GGNCC	7 cut(s)	248, 369, 382, 691, 716, 765, 972
SchI	GAGTC	3 cut(s)	572, 1238, 1283
ScrFI	CCNGG	7 cut(s)	222, 253, 254, 380, 824, 955, 1067
SduI	GDGCHC	7 cut(s)	51, 300, 576, 804, 824, 922, 1361
SfaNI	GCATC	4 cut(s)	105, 446, 617, 877
SfcI	CTRYAG	2 cut(s)	336, 559
SfoI	GGCGCC	1 cut(s)	1041
Sfr303I	CCGCGG	1 cut(s)	94
SgrBI	CCGCGG	1 cut(s)	94
SinI	GGWCC	2 cut(s)	369, 972
SmaI	CCCGGG	1 cut(s)	254
SmiMI	CAYNNNNRTG	2 cut(s)	699, 1202
SmlI	CTYRAG	2 cut(s)	676, 1506
SmoI	CTYRAG	2 cut(s)	676, 1506
SphI	GCATGC	1 cut(s)	604
Sse9I	AATT	5 cut(s)	463, 494, 1266, 1401, 1432
SspDI	GGCGCC	1 cut(s)	1039
SspMI	CTAG	4 cut(s)	185, 392, 488, 1519
SstI	GAGCTC	1 cut(s)	1361
StyD4I	CCNGG	7 cut(s)	220, 251, 252, 378, 822, 953, 1065
StyI	CCWWGG	1 cut(s)	891
TaaI	ACNGT	1 cut(s)	109
TaiI	ACGT	3 cut(s)	237, 801, 866
TaqI	TCGA	4 cut(s)	66, 273, 511, 1399
TasI	AATT	5 cut(s)	463, 494, 1266, 1401, 1432
TatI	WGTACW	1 cut(s)	1194
TauI	GCSGC	4 cut(s)	96, 743, 1045, 1340
TfiI	GAWTC	4 cut(s)	396, 405, 566, 1289
Tru1I	TTAA	1 cut(s)	1404
Tru9I	TTAA	1 cut(s)	1404
TscAI	CASTG	3 cut(s)	314, 458, 1097
TseFI	GTSAC	1 cut(s)	115
TseI	GCWGC	1 cut(s)	877
Tsp45I	GTSAC	1 cut(s)	115
TspDTI	ATGAA	1 cut(s)	635
TspGWI	ACGGA	2 cut(s)	163, 723
TspMI	CCCGGG	1 cut(s)	252
TspRI	CASTG	3 cut(s)	314, 458, 1097
VpaK11BI	GGWCC	2 cut(s)	369, 972
XagI	CCTNNNNNAGG	1 cut(s)	42
XapI	RAATTY	2 cut(s)	494, 1432
XceI	RCATGY	2 cut(s)	55, 604
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1070
XmaI	CCCGGG	1 cut(s)	252
XspI	CTAG	4 cut(s)	185, 392, 488, 1519
Zsp2I	ATGCAT	1 cut(s)	632

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.