AT5G04460

protein binding, zinc ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0004489
Physical Location & Seq
Forward (+)
1259435 .. 1264025
4591 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G04460.6

Sequence Viewer

Length: 2592 bp
ATGACTAGTATTCAGCCTTTGCTACAAAAATCGGAGTCTAGAGATGATGTTCGTGCTGAGTTTGAGAGAGGTTTGGAGGAATTCATGCGTGGGCACTTGGACGAGTGTATCTCATTTGGGTCTTGTAGTTCTGTTCACAACCCTGAGGATGAGGATAATGAGGATGATCAGCTTGTGAGGAGGAGACGAAGGTCTGAACTTGAAGGGGATAATTTGGCTGAATCATCTGCTGCAAGAAGACGCCAATCTCAAATTTTGAGCCGTTGGGCTGCTAGGCAGGCTCAGGAGATGATTACTACGATTGAGAGGAGGAATCGAGAGTCTGAGTTGATTGCGTTGGCTGGTTTGCAAACGGTCTCTATGCTTGATTCTTCTTTTCTTAGGGAGTCTCAGTCTCAGTCTCCGTCTTCAAGGCGTCAGGGTGCTGCTAGTGAGAGGCCTAACACTCAGGCATCTGGGATTTTGCAGATGTGGAGGGAATTGGAAGATGAGCATGTGCTTAACAGGGCACGTGAAAGGGTGAGGGAAAGATTGAGGCAGCAAAGAAGTGTTGAGTCTAATACTAATTTATCTAGCTCTATTGCTTCGGAGAGTCAGCTGAGTGAAAATAATGGGAGTCTGAGAGACTCAAGTGAGAGTGAGAATGATTTCGGGTCTTGGTCACATGATCGGAATGAGCATGGGGATAATAATAATACTTCCAGTAGGGAACAATCTCCTGATCTTGGTGATGGCGAGAGGGAGAGGGTGAGGCATATTGCTCGTGGATGGATGGATAGTAGGATCAATGATCATTCATCTAATGTAAGGCAGAGAGACGATAACCGTAGACCGGAGTGGCTGGGTGATACTGAACGAGAAAGAGTCAGGATTATAAGAGAGTGGATGCAAATGACAAGTCAGCAGAGAGGAGGAGCTCGTGCAACACCGAGAGAAGATCAGAGGTCTACTTCAGAAGCTGATAGGAATCATGACGCTGCACCACAAGTTGACAGGGTCCGTGTAGGGTTAGCTGTTAACCATGAAGAAGGACAACCACCTCATGTTCGTCGAGACTTGCGGAGAGTTAGAGGTAGGCAGGCGTTACTTGATTTGCTTATGAGGGCTGAAAGGGAGAGACAACGAGAACTTCAGGGCTTGTTGGAGCATCGTGCAGTGTCTGATTTTGCTCACCGCAATCGAATTCAGTCGCTTCTTAGAGGAAGATTCTTGCGGAACGAGCGACCTACAGTTCCAGAGAGAACTCCATCAATGGCTTCAAGGGAACTGCTTCAGCTAAGAGAAAGACAAACTGTCTCTGGCTTAAGGGAAGGGTTCCATAACGGGAGGGAAAATATTGTCCATGAAAATACTAGCAACACTGATAATGATAATAGCAATACTTCCACAAATGCTCTTGCAATTGCAATCACTGCTGGGAATTCTCAGCGTGTAACCGATGAGAGTTCAACTTCTTCCAGACAAGGGAATGATAGTCCCATTTTGCCTGATAACTCAGAAAGCAACCTAGCAAATGCGGATAGAGACTGGGAAGAGGATACCAATCAAAGAAGGATCTGGCAGGAAAATGTCCCAGTAGATGAGAGGCCAAATTTGGAGCAAACAACTCTAACGCAATTTGATGGGTATGATAACACAGATATAAATCGTGATGAAACCTCTGTCAGTGACATGCACCGAGAAGCTAGTGGATTTGCAGATGATGAATATCGCACACAAGAAGCTCATGGTGTTTGGCATGAGAATAGCTCTAGACAATCCGATGGGAACTGGCCTGGGACACGGTCAGAAGCCCTAAGGAGTCGCCGTGTAGTACAGTTGAGAAGATTAAATAGGTTCCATCCACCTGAGGATGACAATGTTTACAGCATGGAACTCAGGGAGCTCCTAAGCAGGAGAAGTGTTTCTAATCTACTACATAGTGGTTTCCGTGAAAGTCTTGATCAACTGATACAGTCATATGCTGAAAGGAGAGGACACACTCACGTAGACTGGGATCTGCACGCTAACCTGCAAACAGCAATCCCAGATTCTCCAGAACGTGACACAGACCACCAAGTATTTGTGCGGAACGATAACCAACTTAATGGCATCAATGGTTCACAACTGCTTCCCACTCCACCCGCGCCTCCACCCCAGCCAATATGGCATCAAGATTTGCACCACACTAGCTGGTCTCGTCACTCTATGCATCGGTCTGAAATTGAATGGGAGGTAATGAACGACCTAAGAGGAGACGTGGCAAGACTGCAGCAAGGAATGAGCCAGATGCAGAGGATGCTTGAAGCCTGCATGGATATGCAGTTAGAGCTGCAGCGTTCGGTTAGACAAGAGGTCTCTGCAGCCCTAAACCGATCTGCAGGTGACCAAGGTATGAGTGCGGAAACATCAGAGGATGGTTCAAGATGGAGCCATGTAAGCAAAGGAACTTGTTGCGTTTGTTGTGACAACCACATTGATGCTCTCTTGTATAGATGCGGACACATGTGTACTTGCTCAAAATGTGCAAATGAGCTTGTAAGAAACGGAGGAAAATGTCCGCTTTGTAGAGCACCGATCATCGAGGTAATCCGAGCCTACTCCATTTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

863

Amino Acids

99.17

Weight (kDa)

5.73

Isoelectric Point (pI)

69.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 808 - 855 5.1e-12 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 875, 2590
AarI CACCTGC 1 cut(s) 2351
Acc36I ACCTGC 2 cut(s) 2019, 2351
AccI GTMKAC 3 cut(s) 829, 947, 1989
AccII CGCG 1 cut(s) 2126
AciI CCGC 9 cut(s) 1060, 1174, 1213, 1517, 2068, 2124, 2381, 2478, 2540
AclWI GGATC 3 cut(s) 791, 1562, 2004
AcsI RAATTY 5 cut(s) 80, 252, 1182, 1420, 1591
AcuI CTGAAG 3 cut(s) 936, 1115, 1256
AcvI CACGTG 1 cut(s) 512
AcyI GRCGYC 2 cut(s) 241, 415
AfaI GTAC 2 cut(s) 1815, 2491
AfiI CCNNNNNNNGG 3 cut(s) 725, 832, 1464
AflII CTTAAG 1 cut(s) 1303
AflIII ACRYGT 1 cut(s) 2484
AgsI TTSAA 7 cut(s) 203, 411, 1260, 1449, 2207, 2285, 2403
AhdI GACNNNNNGTC 2 cut(s) 1292, 2333
AhlI ACTAGT 1 cut(s) 5
AjiI CACGTC 1 cut(s) 2239
AjnI CCWGG 1 cut(s) 1774
Alw21I GWGCWC 3 cut(s) 919, 1887, 2554
AlwI GGATC 3 cut(s) 791, 1562, 2004
AlwNI CAGNNNCTG 2 cut(s) 959, 1160
AoxI GGCC 3 cut(s) 437, 1586, 1772
ApeKI GCWGC 9 cut(s) 230, 269, 425, 538, 977, 2251, 2311, 2314, 2342
ApoI RAATTY 5 cut(s) 80, 252, 1182, 1420, 1591
ArsI GACNNNNNNTTYG 2 cut(s) 883, 915
Asp700I GAANNNNTTC 3 cut(s) 647, 1269, 1903
AspLEI GCGC 1 cut(s) 2128
AspS9I GGNCC 1 cut(s) 997
AsuHPI GGTGA 6 cut(s) 532, 740, 760, 857, 1163, 2375
AvaII GGWCC 1 cut(s) 997
AxyI CCTNAGG 3 cut(s) 144, 1796, 1848
BaeGI GKGCMC 2 cut(s) 96, 511
BaeI ACNNNNGTAYC 2 cut(s) 91, 124
BanII GRGCYC 2 cut(s) 919, 1887
BauI CACGAG 2 cut(s) 762, 918
BbrPI CACGTG 1 cut(s) 512
BbsI GAAGAC 2 cut(s) 244, 399
Bbv12I GWGCWC 3 cut(s) 919, 1887, 2554
BbvI GCAGC 9 cut(s) 217, 256, 412, 550, 964, 2263, 2298, 2326, 2354
BccI CCATC 9 cut(s) 725, 762, 766, 1255, 1616, 1757, 1848, 2390, 2400
BceAI ACGGC 2 cut(s) 246, 1791
BcgI CGANNNNNNTGC 2 cut(s) 743, 777
BciT130I CCWGG 1 cut(s) 1776
BciVI GTATCC 1 cut(s) 1531
BclI TGATCA 3 cut(s) 166, 790, 1942
BcuI ACTAGT 1 cut(s) 5
BfmI CTRYAG 5 cut(s) 1227, 2249, 2312, 2340, 2358
BfrI CTTAAG 1 cut(s) 1303
BfuAI ACCTGC 2 cut(s) 2019, 2351
BfuI GTATCC 1 cut(s) 1531
BglI GCCNNNNNGGC 1 cut(s) 2146
BisI GCNGC 9 cut(s) 231, 270, 426, 539, 978, 2252, 2312, 2315, 2343
BlsI GCNGC 9 cut(s) 232, 271, 427, 540, 979, 2253, 2313, 2316, 2344
Bme1390I CCNGG 1 cut(s) 1776
Bme18I GGWCC 1 cut(s) 997
BmeRI GACNNNNNGTC 2 cut(s) 1292, 2333
BmgBI CACGTC 1 cut(s) 2239
BmgT120I GGNCC 1 cut(s) 997
BmiI GGNNCC 4 cut(s) 998, 1316, 1838, 2411
BmrFI CCNGG 1 cut(s) 1776
BmrI ACTGGG 3 cut(s) 1537, 1568, 2002
BmuI ACTGGG 3 cut(s) 1537, 1568, 2002
BoxI GACNNNNGTC 1 cut(s) 190
BpiI GAAGAC 2 cut(s) 244, 399
BplI GAGNNNNNCTC 4 cut(s) 95, 127, 1733, 1765
BpmI CTGGAG 1 cut(s) 2019
Bpu10I CCTNAGC 2 cut(s) 282, 1889
BpuEI CTTGAG 1 cut(s) 613
BsaAI YACGTR 2 cut(s) 512, 1987
BsaBI GATNNNNATC 4 cut(s) 966, 1542, 1644, 1707
BsaHI GRCGYC 2 cut(s) 241, 415
BsaI GGTCTC 3 cut(s) 361, 2181, 2341
BsaJI CCNNGG 2 cut(s) 1775, 2368
BsaWI WCCGGW 1 cut(s) 832
BsaXI ACNNNNNCTCC 4 cut(s) 377, 407, 1792, 1822
Bsc4I CCNNNNNNNGG 3 cut(s) 725, 832, 1464
Bse1I ACTGG 5 cut(s) 702, 1532, 1574, 1775, 1997
Bse21I CCTNAGG 3 cut(s) 144, 1796, 1848
Bse8I GATNNNNATC 4 cut(s) 966, 1542, 1644, 1707
BseBI CCWGG 1 cut(s) 1776
BseDI CCNNGG 2 cut(s) 1775, 2368
BseGI GGATG 9 cut(s) 154, 169, 773, 777, 891, 1840, 1858, 2283, 2401
BseJI GATNNNNATC 4 cut(s) 966, 1542, 1644, 1707
BseLI CCNNNNNNNGG 3 cut(s) 725, 832, 1464
BseNI ACTGG 5 cut(s) 702, 1532, 1574, 1775, 1997
BseRI GAGGAG 6 cut(s) 193, 196, 322, 924, 927, 2247
BseSI GKGCMC 2 cut(s) 96, 511
BseXI GCAGC 9 cut(s) 217, 256, 412, 550, 964, 2263, 2298, 2326, 2354
BseYI CCCAGC 3 cut(s) 841, 1415, 2136
BsgI GTGCAG 3 cut(s) 963, 1173, 1985
Bsh1236I CGCG 1 cut(s) 2126
BshFI GGCC 3 cut(s) 439, 1588, 1774
BsiHKAI GWGCWC 3 cut(s) 919, 1887, 2554
BsiSI CCGG 1 cut(s) 833
BslFI GGGAC 3 cut(s) 1461, 1556, 1792
BslI CCNNNNNNNGG 3 cut(s) 725, 832, 1464
BsmBI CGTCTC 3 cut(s) 178, 810, 2229
BsmFI GGGAC 3 cut(s) 1461, 1556, 1792
BsnI GGCC 3 cut(s) 439, 1588, 1774
Bso31I GGTCTC 3 cut(s) 361, 2181, 2341
Bsp1286I GDGCHC 5 cut(s) 96, 511, 919, 1887, 2554
BspACI CCGC 9 cut(s) 1060, 1174, 1213, 1517, 2068, 2124, 2381, 2478, 2540
BspANI GGCC 3 cut(s) 439, 1588, 1774
BspFNI CGCG 1 cut(s) 2126
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 4 cut(s) 998, 1316, 1838, 2411
BspMAI CTGCAG 4 cut(s) 2253, 2316, 2344, 2362
BspMI ACCTGC 2 cut(s) 2019, 2351
BspPI GGATC 3 cut(s) 791, 1562, 2004
BspTI CTTAAG 1 cut(s) 1303
BspTNI GGTCTC 3 cut(s) 361, 2181, 2341
BsrI ACTGG 5 cut(s) 702, 1532, 1574, 1775, 1997
BssECI CCNNGG 2 cut(s) 1775, 2368
BssNI GRCGYC 2 cut(s) 241, 415
BssSI CACGAG 2 cut(s) 762, 918
BssT1I CCWWGG 1 cut(s) 2368
Bst2BI CACGAG 2 cut(s) 762, 918
Bst2UI CCWGG 1 cut(s) 1776
Bst4CI ACNGT 7 cut(s) 355, 827, 1231, 1294, 1785, 1818, 1956
Bst6I CTCTTC 1 cut(s) 1527
BstACI GRCGYC 2 cut(s) 241, 415
BstAFI CTTAAG 1 cut(s) 1303
BstAPI GCANNNNNTGC 2 cut(s) 1412, 2278
BstBAI YACGTR 2 cut(s) 512, 1987
BstC8I GCNNGC 4 cut(s) 279, 1080, 2004, 2290
BstEII GGTNACC 1 cut(s) 2363
BstF5I GGATG 9 cut(s) 154, 169, 773, 777, 891, 1840, 1858, 2283, 2401
BstFNI CGCG 1 cut(s) 2126
BstHHI GCGC 1 cut(s) 2128
BstMWI GCNNNNNNNGC 7 cut(s) 278, 1219, 1412, 2146, 2278, 2308, 2418
BstNI CCWGG 1 cut(s) 1776
BstNSI RCATGY 3 cut(s) 497, 1675, 2488
BstPAI GACNNNNGTC 1 cut(s) 190
BstPI GGTNACC 1 cut(s) 2363
BstSCI CCNGG 1 cut(s) 1774
BstSFI CTRYAG 5 cut(s) 1227, 2249, 2312, 2340, 2358
BstSLI GKGCMC 2 cut(s) 96, 511
BstUI CGCG 1 cut(s) 2126
BstV1I GCAGC 9 cut(s) 217, 256, 412, 550, 964, 2263, 2298, 2326, 2354
BstV2I GAAGAC 2 cut(s) 244, 399
BstX2I RGATCY 2 cut(s) 1554, 1996
BstXI CCANNNNNNTGG 1 cut(s) 2087
BstYI RGATCY 2 cut(s) 1554, 1996
Bsu36I CCTNAGG 3 cut(s) 144, 1796, 1848
BsuI GTATCC 1 cut(s) 1531
BsuRI GGCC 3 cut(s) 439, 1588, 1774
BtrI CACGTC 1 cut(s) 2239
BtsCI GGATG 9 cut(s) 154, 169, 773, 777, 891, 1840, 1858, 2283, 2401
BtsI GCAGTG 2 cut(s) 1161, 1410
BtsIMutI CAGTG 4 cut(s) 1161, 1359, 1410, 1672
BveI ACCTGC 2 cut(s) 2019, 2351
Cac8I GCNNGC 4 cut(s) 279, 1080, 2004, 2290
CaiI CAGNNNCTG 2 cut(s) 959, 1160
CciI TCATGA 1 cut(s) 970
CfoI GCGC 1 cut(s) 2128
Cfr13I GGNCC 1 cut(s) 997
CseI GACGC 3 cut(s) 249, 404, 983
Csp6I GTAC 2 cut(s) 1814, 2490
CviQI GTAC 2 cut(s) 1814, 2490
DriI GACNNNNNGTC 2 cut(s) 1292, 2333
Eam1104I CTCTTC 1 cut(s) 1527
Eam1105I GACNNNNNGTC 2 cut(s) 1292, 2333
EarI CTCTTC 1 cut(s) 1527
Ecl136II GAGCTC 2 cut(s) 917, 1885
Eco130I CCWWGG 1 cut(s) 2368
Eco147I AGGCCT 1 cut(s) 439
Eco24I GRGCYC 2 cut(s) 919, 1887
Eco31I GGTCTC 3 cut(s) 361, 2181, 2341
Eco47I GGWCC 1 cut(s) 997
Eco53kI GAGCTC 2 cut(s) 917, 1885
Eco57I CTGAAG 3 cut(s) 936, 1115, 1256
Eco72I CACGTG 1 cut(s) 512
Eco81I CCTNAGG 3 cut(s) 144, 1796, 1848
Eco91I GGTNACC 1 cut(s) 2363
EcoICRI GAGCTC 2 cut(s) 917, 1885
EcoO65I GGTNACC 1 cut(s) 2363
EcoRI GAATTC 3 cut(s) 80, 1182, 1420
EcoRII CCWGG 1 cut(s) 1774
EcoT14I CCWWGG 1 cut(s) 2368
EcoT22I ATGCAT 1 cut(s) 2193
EcoT38I GRGCYC 2 cut(s) 919, 1887
ErhI CCWWGG 1 cut(s) 2368
Esp3I CGTCTC 3 cut(s) 178, 810, 2229
FaqI GGGAC 3 cut(s) 1461, 1556, 1792
FauI CCCGC 1 cut(s) 2131
FauNDI CATATG 1 cut(s) 1960
FbaI TGATCA 3 cut(s) 166, 790, 1942
FblI GTMKAC 3 cut(s) 829, 947, 1989
Fnu4HI GCNGC 9 cut(s) 231, 270, 426, 539, 978, 2252, 2312, 2315, 2343
FokI GGATG 9 cut(s) 161, 176, 780, 784, 898, 1827, 1865, 2290, 2408
FriOI GRGCYC 2 cut(s) 919, 1887
Fsp4HI GCNGC 9 cut(s) 231, 270, 426, 539, 978, 2252, 2312, 2315, 2343
GlaI GCGC 1 cut(s) 2127
GluI GCNGC 9 cut(s) 231, 270, 426, 539, 978, 2252, 2312, 2315, 2343
GsaI CCCAGC 3 cut(s) 845, 1419, 2140
GsuI CTGGAG 1 cut(s) 2019
HaeIII GGCC 3 cut(s) 439, 1588, 1774
HapII CCGG 1 cut(s) 833
HgaI GACGC 3 cut(s) 249, 404, 983
HhaI GCGC 1 cut(s) 2128
Hin1I GRCGYC 2 cut(s) 241, 415
Hin6I GCGC 1 cut(s) 2126
HinP1I GCGC 1 cut(s) 2126
HincII GTYRAC 2 cut(s) 991, 1018
HindII GTYRAC 2 cut(s) 991, 1018
HpaI GTTAAC 1 cut(s) 1018
HpaII CCGG 1 cut(s) 833
HphI GGTGA 6 cut(s) 532, 740, 760, 857, 1163, 2375
Hpy166II GTNNAC 9 cut(s) 136, 830, 948, 991, 1018, 1864, 1990, 2102, 2490
Hpy8I GTNNAC 9 cut(s) 136, 830, 948, 991, 1018, 1864, 1990, 2102, 2490
Hpy99I CGWCG 1 cut(s) 1053
HpyAV CCTTC 5 cut(s) 183, 197, 1022, 1304, 1545
HpyCH4III ACNGT 7 cut(s) 355, 827, 1231, 1294, 1785, 1818, 1956
HpyCH4IV ACGT 4 cut(s) 511, 1986, 2041, 2238
HpyF10VI GCNNNNNNNGC 7 cut(s) 278, 1219, 1412, 2146, 2278, 2308, 2418
HpySE526I ACGT 4 cut(s) 511, 1986, 2041, 2238
Hsp92I GRCGYC 2 cut(s) 241, 415
HspAI GCGC 1 cut(s) 2126
Ksp22I TGATCA 3 cut(s) 166, 790, 1942
KspAI GTTAAC 1 cut(s) 1018
LmnI GCTCC 6 cut(s) 914, 1144, 1597, 1882, 1890, 2409
Lsp1109I GCAGC 9 cut(s) 217, 256, 412, 550, 964, 2263, 2298, 2326, 2354
MaeII ACGT 4 cut(s) 511, 1986, 2041, 2238
MaeIII GTNAC 8 cut(s) 660, 1083, 1432, 1667, 2042, 2180, 2363, 2444
MfeI CAATTG 1 cut(s) 1401
MflI RGATCY 2 cut(s) 1554, 1996
MhlI GDGCHC 5 cut(s) 96, 511, 919, 1887, 2554
MlyI GAGTC 9 cut(s) 44, 329, 395, 563, 601, 620, 625, 873, 1810
MmeI TCCRAC 1 cut(s) 1122
Mph1103I ATGCAT 1 cut(s) 2193
MroXI GAANNNNTTC 3 cut(s) 647, 1269, 1903
MseI TTAA 5 cut(s) 501, 1017, 1304, 1829, 2085
MslI CAYNNNNRTG 2 cut(s) 2297, 2457
MspA1I CMGCKG 1 cut(s) 598
MspCI CTTAAG 1 cut(s) 1303
MspI CCGG 1 cut(s) 833
MspR9I CCNGG 1 cut(s) 1776
MunI CAATTG 1 cut(s) 1401
MvaI CCWGG 1 cut(s) 1776
MvnI CGCG 1 cut(s) 2126
MwoI GCNNNNNNNGC 7 cut(s) 278, 1219, 1412, 2146, 2278, 2308, 2418
NdeI CATATG 1 cut(s) 1960
NlaIV GGNNCC 4 cut(s) 998, 1316, 1838, 2411
NmuCI GTSAC 6 cut(s) 660, 1667, 2042, 2180, 2363, 2444
NsiI ATGCAT 1 cut(s) 2193
NspI RCATGY 3 cut(s) 497, 1675, 2488
PagI TCATGA 1 cut(s) 970
PaqCI CACCTGC 1 cut(s) 2351
PceI AGGCCT 1 cut(s) 439
PciI ACATGT 1 cut(s) 2484
PdmI GAANNNNTTC 3 cut(s) 647, 1269, 1903
PfeI GAWTC 6 cut(s) 221, 313, 368, 967, 1206, 2030
PflFI GACNNNGTC 2 cut(s) 995, 1783
PkrI GCNGC 9 cut(s) 232, 271, 427, 540, 979, 2253, 2313, 2316, 2344
PleI GAGTC 9 cut(s) 43, 328, 394, 562, 600, 620, 624, 872, 1809
PmaCI CACGTG 1 cut(s) 512
PmlI CACGTG 1 cut(s) 512
PpsI GAGTC 9 cut(s) 43, 328, 394, 562, 600, 620, 624, 872, 1809
Ppu21I YACGTR 2 cut(s) 512, 1987
PscI ACATGT 1 cut(s) 2484
PshAI GACNNNNGTC 1 cut(s) 190
PsiI TTATAA 2 cut(s) 875, 2590
Psp124BI GAGCTC 2 cut(s) 919, 1887
Psp6I CCWGG 1 cut(s) 1774
PspCI CACGTG 1 cut(s) 512
PspEI GGTNACC 1 cut(s) 2363
PspFI CCCAGC 3 cut(s) 841, 1415, 2136
PspGI CCWGG 1 cut(s) 1774
PspN4I GGNNCC 4 cut(s) 998, 1316, 1838, 2411
PspPI GGNCC 1 cut(s) 997
PstI CTGCAG 4 cut(s) 2253, 2316, 2344, 2362
PstNI CAGNNNCTG 2 cut(s) 959, 1160
PsuI RGATCY 2 cut(s) 1554, 1996
PsyI GACNNNGTC 2 cut(s) 995, 1783
PvuII CAGCTG 1 cut(s) 598
RsaI GTAC 2 cut(s) 1815, 2491
RsaNI GTAC 2 cut(s) 1814, 2490
RseI CAYNNNNRTG 2 cut(s) 2297, 2457
SacI GAGCTC 2 cut(s) 919, 1887
SaqAI TTAA 5 cut(s) 501, 1017, 1304, 1829, 2085
SatI GCNGC 9 cut(s) 231, 270, 426, 539, 978, 2252, 2312, 2315, 2343
Sau96I GGNCC 1 cut(s) 997
SchI GAGTC 9 cut(s) 44, 329, 395, 563, 601, 620, 625, 873, 1810
ScrFI CCNGG 1 cut(s) 1776
SduI GDGCHC 5 cut(s) 96, 511, 919, 1887, 2554
SfcI CTRYAG 5 cut(s) 1227, 2249, 2312, 2340, 2358
SinI GGWCC 1 cut(s) 997
SmiMI CAYNNNNRTG 2 cut(s) 2297, 2457
SmlI CTYRAG 2 cut(s) 628, 1303
SmoI CTYRAG 2 cut(s) 628, 1303
SpeI ACTAGT 1 cut(s) 5
SseBI AGGCCT 1 cut(s) 439
SsiI CCGC 9 cut(s) 1060, 1174, 1213, 1517, 2068, 2124, 2381, 2478, 2540
SspI AATATT 1 cut(s) 1336
SstI GAGCTC 2 cut(s) 919, 1887
StuI AGGCCT 1 cut(s) 439
StyD4I CCNGG 1 cut(s) 1774
StyI CCWWGG 1 cut(s) 2368
TaaI ACNGT 7 cut(s) 355, 827, 1231, 1294, 1785, 1818, 1956
TaiI ACGT 4 cut(s) 514, 1989, 2044, 2241
TaqI TCGA 4 cut(s) 316, 1051, 1180, 2562
TaqII GACCGA 1 cut(s) 2184
TatI WGTACW 2 cut(s) 1813, 2489
TfiI GAWTC 6 cut(s) 221, 313, 368, 967, 1206, 2030
Tru1I TTAA 5 cut(s) 501, 1017, 1304, 1829, 2085
Tru9I TTAA 5 cut(s) 501, 1017, 1304, 1829, 2085
TscAI CASTG 4 cut(s) 1161, 1366, 1417, 1672
TseFI GTSAC 6 cut(s) 660, 1667, 2042, 2180, 2363, 2444
TseI GCWGC 9 cut(s) 230, 269, 425, 538, 977, 2251, 2311, 2314, 2342
Tsp45I GTSAC 6 cut(s) 660, 1667, 2042, 2180, 2363, 2444
TspDTI ATGAA 7 cut(s) 73, 786, 1038, 1359, 1668, 1719, 2234
TspGWI ACGGA 4 cut(s) 393, 989, 1919, 2541
TspRI CASTG 4 cut(s) 1161, 1366, 1417, 1672
Tth111I GACNNNGTC 2 cut(s) 995, 1783
Vha464I CTTAAG 1 cut(s) 1303
VpaK11BI GGWCC 1 cut(s) 997
XapI RAATTY 5 cut(s) 80, 252, 1182, 1420, 1591
XbaI TCTAGA 2 cut(s) 38, 1751
XceI RCATGY 3 cut(s) 497, 1675, 2488
XmiI GTMKAC 3 cut(s) 829, 947, 1989
XmnI GAANNNNTTC 3 cut(s) 647, 1269, 1903
Zsp2I ATGCAT 1 cut(s) 2193
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.