Rorug01G0123200

Zinc finger, C3HC4 type (RING finger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0004489
Physical Location & Seq
Forward (+)
21284006 .. 21287588
3583 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0123200.1

Sequence Viewer

Length: 1398 bp
ATGGGAACTGTTGCTGCTCCATTCATGATGGAATTAGCATCTGAGGGTGATCAGAAGCAAAATGGTGCCGAGGCGCCCGGCGGCCCTCCGAAAGAGCTTGACGCCGGAGCTCTCTTCGTTCTCAAATCGCAAGGGTCGTGGTTACATGTTGGGTACCACTTGACGACATCTATAGTGGCTCCGGTGCTTCTAAGTCTTCCGTTTGCGATGGCCTTGCTCGGCTGGGTTGGGGGAGTCATTTGTGTAGCCTTGGCAGGTTTGGTCACCTTCTACTCCTACAATCTTCTCTCTTTAGTTCTTGAGCACCAAGAAAAGCTTGGGCATCGTCAACTTCGCTTTCGAGACATGGCCAAAGACATTTTAGGTCCTGCATGGGGCAAATATTTTGTCGGTCCTTTGCAATTTTGGATATGCTATGGTGCAGTCATCGCTTGCACATTACTTGGAGGGCAGAGCCTTAAGATTATTTACTTGCTCTCTAATCCAGATGGAACAATGAAGCTGTACCAGTTTATTATTATGTTCGGATGCGTCACACTCTTTTTGGCTCAAATGCCATCCTTCCACTCCTTAAGGCATATTAACCTCGTTTCTCTAATCCTTTGTCTTGCATATAGCGCCTGCGTCACTGCTGGCTGCATATACATTGGGCATACGAACAATGCTCCTATAAAGGACTATTCCATAAAAGGAAGTACAAAAGATCGGTATTTTGGTATCTTTAATGGCATCTCAATCATCGCTACCACATACGCAAGTGGAATAATTCCGGAGATACAGGCAACTTTGGCACCTCCAGTAAAAGGCAAGATGTTCAAAGGGCTATGTGTGTGCTATAGTGTGATAGTGACAACCTATTTCAGTGTCGCAATGTCTGGGTATTGGGTGTTTGGCAACCAAGCTATGGGAACAGTTCTTTCCAATTTTATGGGTGTTGATGGGAAGCTTTTACTCCCTACCTGGTTTTTGGTCATGACCAATGTCTTCACTCTTGTGCAAGTCATGGCTGTCACAGTGGTTTACTTGCAACCAACAAATGAAGTGTTTGAAAAGAAATTTGCAGACCCAAAAATGGATCAATTTTCCATCCGTAATGTTGTGCCGCGGTTGATTCTCCGGTCGGTCACCGTCGTGGTAGCTACATTTTTTGCTGCGATGTTACCTTTCTTCGGAGATATCATGGCATTGTTTGGGGCATTTGGATGCATTCCTCTAGATTTCATTTTGCCAATGATATTCTACAATGTGGCTTTCAAGCCCTCAAAGCAAAGCCTCATATTTTGGGTTAACACATTGATAGCAGGAGTATCGTTCTTGTTGGTTGGGGTAGGGGCTGTAGCATCTGTTAGACAGATTGTTCTTGATGCTAAAACATATCGCCTGTTTGCTAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

465

Amino Acids

50.87

Weight (kDa)

8.96

Isoelectric Point (pI)

26.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aa_trans PF01490 44 - 447 9.7e-68 Transmembrane amino acid transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 245
Acc65I GGTACC 1 cut(s) 153
AccB1I GGYRCC 4 cut(s) 65, 73, 153, 790
AccB7I CCANNNNNTGG 1 cut(s) 904
AccII CGCG 1 cut(s) 1105
AccIII TCCGGA 1 cut(s) 769
AciI CCGC 3 cut(s) 81, 1103, 1105
AclWI GGATC 1 cut(s) 1083
AcoI YGGCCR 1 cut(s) 348
AcsI RAATTY 1 cut(s) 1055
AcyI GRCGYC 2 cut(s) 74, 102
AfaI GTAC 3 cut(s) 155, 506, 697
AfiI CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
AflII CTTAAG 2 cut(s) 458, 571
AflIII ACRYGT 2 cut(s) 145, 1392
AgsI TTSAA 3 cut(s) 817, 1049, 1255
AjnI CCWGG 1 cut(s) 959
AleI CACNNNNGTG 2 cut(s) 992, 1130
AluBI AGCT 7 cut(s) 97, 110, 316, 502, 902, 946, 1139
AluI AGCT 7 cut(s) 97, 110, 316, 502, 902, 946, 1139
Alw21I GWGCWC 2 cut(s) 112, 306
Alw26I GTCTC 1 cut(s) 336
AlwI GGATC 1 cut(s) 1083
Aor13HI TCCGGA 1 cut(s) 769
AoxI GGCC 3 cut(s) 82, 210, 348
ApeKI GCWGC 3 cut(s) 14, 636, 1151
ApoI RAATTY 1 cut(s) 1055
ArsI GACNNNNNNTTYG 2 cut(s) 372, 404
Asp718I GGTACC 1 cut(s) 153
AspLEI GCGC 2 cut(s) 76, 620
AspS9I GGNCC 3 cut(s) 83, 365, 392
AsuC2I CCSGG 1 cut(s) 78
AsuHPI GGTGA 3 cut(s) 59, 256, 1117
AvaII GGWCC 2 cut(s) 365, 392
BalI TGGCCA 1 cut(s) 350
BanI GGYRCC 4 cut(s) 65, 73, 153, 790
BanII GRGCYC 1 cut(s) 112
BbsI GAAGAC 2 cut(s) 188, 976
Bbv12I GWGCWC 2 cut(s) 112, 306
BbvI GCAGC 2 cut(s) 623, 1138
BccI CCATC 6 cut(s) 22, 202, 482, 565, 932, 1094
BcgI CGANNNNNNTGC 4 cut(s) 196, 230, 1290, 1324
BciT130I CCWGG 1 cut(s) 961
BclI TGATCA 1 cut(s) 49
BcnI CCSGG 1 cut(s) 78
BcoDI GTCTC 1 cut(s) 336
BfaI CTAG 1 cut(s) 1214
BfmI CTRYAG 3 cut(s) 171, 835, 1335
BfoI RGCGCY 2 cut(s) 77, 621
BfrI CTTAAG 2 cut(s) 458, 571
BfuAI ACCTGC 1 cut(s) 245
BisI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
BlsI GCNGC 5 cut(s) 16, 83, 638, 1104, 1153
Bme1390I CCNGG 2 cut(s) 78, 961
Bme18I GGWCC 2 cut(s) 365, 392
BmgT120I GGNCC 3 cut(s) 83, 365, 392
BmiI GGNNCC 5 cut(s) 67, 75, 155, 180, 792
BmrFI CCNGG 2 cut(s) 78, 961
BmsI GCATC 7 cut(s) 47, 331, 518, 738, 1193, 1349, 1354
BoxI GACNNNNGTC 1 cut(s) 980
BpiI GAAGAC 2 cut(s) 188, 976
BpmI CTGGAG 1 cut(s) 780
BpuEI CTTGAG 1 cut(s) 320
BpuMI CCSGG 1 cut(s) 78
BsaHI GRCGYC 2 cut(s) 74, 102
BsaJI CCNNGG 3 cut(s) 69, 249, 1103
BsaWI WCCGGW 3 cut(s) 181, 769, 1116
Bsc4I CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
Bse1I ACTGG 2 cut(s) 508, 797
Bse3DI GCAATG 1 cut(s) 876
BseAI TCCGGA 1 cut(s) 769
BseBI CCWGG 1 cut(s) 961
BseDI CCNNGG 3 cut(s) 69, 249, 1103
BseGI GGATG 4 cut(s) 533, 557, 1086, 1208
BseLI CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
BseMI GCAATG 1 cut(s) 876
BseMII CTCAG 1 cut(s) 33
BseNI ACTGG 2 cut(s) 508, 797
BseXI GCAGC 2 cut(s) 623, 1138
BseYI CCCAGC 1 cut(s) 222
BsgI GTGCAG 1 cut(s) 441
Bsh1236I CGCG 1 cut(s) 1105
Bsh1285I CGRYCG 1 cut(s) 1121
BshFI GGCC 3 cut(s) 84, 212, 350
BshNI GGYRCC 4 cut(s) 65, 73, 153, 790
BsiEI CGRYCG 1 cut(s) 1121
BsiHKAI GWGCWC 2 cut(s) 112, 306
BsiSI CCGG 5 cut(s) 78, 105, 182, 770, 1117
BslI CCNNNNNNNGG 5 cut(s) 374, 803, 904, 1072, 1169
BsmAI GTCTC 1 cut(s) 336
BsmI GAATGC 1 cut(s) 1206
BsnI GGCC 3 cut(s) 84, 212, 350
Bsp1286I GDGCHC 2 cut(s) 112, 306
Bsp13I TCCGGA 1 cut(s) 769
Bsp143I GATC 3 cut(s) 49, 703, 1075
BspACI CCGC 3 cut(s) 81, 1103, 1105
BspANI GGCC 3 cut(s) 84, 212, 350
BspCNI CTCAG 1 cut(s) 34
BspEI TCCGGA 1 cut(s) 769
BspFNI CGCG 1 cut(s) 1105
BspHI TCATGA 2 cut(s) 24, 972
BspLI GGNNCC 5 cut(s) 67, 75, 155, 180, 792
BspMI ACCTGC 1 cut(s) 245
BspPI GGATC 1 cut(s) 1083
BspT107I GGYRCC 4 cut(s) 65, 73, 153, 790
BspTI CTTAAG 2 cut(s) 458, 571
BsrDI GCAATG 1 cut(s) 876
BsrI ACTGG 2 cut(s) 508, 797
BssECI CCNNGG 3 cut(s) 69, 249, 1103
BssMI GATC 3 cut(s) 49, 703, 1075
BssNI GRCGYC 2 cut(s) 74, 102
BssT1I CCWWGG 1 cut(s) 249
Bst2UI CCWGG 1 cut(s) 961
Bst4CI ACNGT 4 cut(s) 10, 913, 1015, 1129
Bst6I CTCTTC 1 cut(s) 119
BstACI GRCGYC 2 cut(s) 74, 102
BstAFI CTTAAG 2 cut(s) 458, 571
BstC8I GCNNGC 3 cut(s) 433, 622, 634
BstDEI CTNAG 2 cut(s) 42, 191
BstDSI CCRYGG 1 cut(s) 1103
BstEII GGTNACC 2 cut(s) 262, 1123
BstF5I GGATG 4 cut(s) 533, 557, 1086, 1208
BstFNI CGCG 1 cut(s) 1105
BstH2I RGCGCY 2 cut(s) 77, 621
BstHHI GCGC 2 cut(s) 76, 620
BstKTI GATC 3 cut(s) 52, 706, 1078
BstMAI GTCTC 1 cut(s) 336
BstMBI GATC 3 cut(s) 49, 703, 1075
BstMCI CGRYCG 1 cut(s) 1121
BstMWI GCNNNNNNNGC 4 cut(s) 428, 617, 788, 1264
BstNI CCWGG 1 cut(s) 961
BstNSI RCATGY 2 cut(s) 149, 1396
BstPAI GACNNNNGTC 1 cut(s) 980
BstPI GGTNACC 2 cut(s) 262, 1123
BstSCI CCNGG 2 cut(s) 76, 959
BstSFI CTRYAG 3 cut(s) 171, 835, 1335
BstUI CGCG 1 cut(s) 1105
BstV1I GCAGC 2 cut(s) 623, 1138
BstV2I GAAGAC 2 cut(s) 188, 976
BstXI CCANNNNNNTGG 1 cut(s) 928
BsuRI GGCC 3 cut(s) 84, 212, 350
BtgI CCRYGG 1 cut(s) 1103
BtgZI GCGATG 4 cut(s) 221, 412, 724, 1169
BtsCI GGATG 4 cut(s) 533, 557, 1086, 1208
BtsI GCAGTG 1 cut(s) 627
BtsIMutI CAGTG 3 cut(s) 627, 868, 1020
BveI ACCTGC 1 cut(s) 245
Cac8I GCNNGC 3 cut(s) 433, 622, 634
CciI TCATGA 2 cut(s) 24, 972
CfoI GCGC 2 cut(s) 76, 620
Cfr13I GGNCC 3 cut(s) 83, 365, 392
Cfr42I CCGCGG 1 cut(s) 1106
CseI GACGC 3 cut(s) 110, 520, 613
CsiI ACCWGGT 1 cut(s) 959
Csp6I GTAC 3 cut(s) 154, 505, 696
CspCI CAANNNNNGTGG 2 cut(s) 119, 154
CviAII CATG 8 cut(s) 25, 146, 346, 372, 973, 1003, 1180, 1393
CviQI GTAC 3 cut(s) 154, 505, 696
DdeI CTNAG 2 cut(s) 42, 191
DinI GGCGCC 1 cut(s) 75
DpnI GATC 3 cut(s) 51, 705, 1077
DpnII GATC 3 cut(s) 49, 703, 1075
EaeI YGGCCR 1 cut(s) 348
Eam1104I CTCTTC 1 cut(s) 119
EarI CTCTTC 1 cut(s) 119
Ecl136II GAGCTC 1 cut(s) 110
Eco130I CCWWGG 1 cut(s) 249
Eco24I GRGCYC 1 cut(s) 112
Eco32I GATATC 1 cut(s) 1177
Eco47I GGWCC 2 cut(s) 365, 392
Eco53kI GAGCTC 1 cut(s) 110
Eco91I GGTNACC 2 cut(s) 262, 1123
EcoICRI GAGCTC 1 cut(s) 110
EcoO109I RGGNCCY 1 cut(s) 365
EcoO65I GGTNACC 2 cut(s) 262, 1123
EcoRII CCWGG 1 cut(s) 959
EcoRV GATATC 1 cut(s) 1177
EcoT14I CCWWGG 1 cut(s) 249
EcoT22I ATGCAT 1 cut(s) 1208
EcoT38I GRGCYC 1 cut(s) 112
EgeI GGCGCC 1 cut(s) 75
EheI GGCGCC 1 cut(s) 75
ErhI CCWWGG 1 cut(s) 249
FaeI CATG 8 cut(s) 28, 149, 349, 375, 976, 1006, 1183, 1396
FalI AAGNNNNNCTT 2 cut(s) 300, 332
FatI CATG 8 cut(s) 24, 145, 345, 371, 972, 1002, 1179, 1392
FbaI TGATCA 1 cut(s) 49
Fnu4HI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
FokI GGATG 4 cut(s) 540, 544, 1073, 1215
FriOI GRGCYC 1 cut(s) 112
Fsp4HI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
FspBI CTAG 1 cut(s) 1214
GlaI GCGC 2 cut(s) 75, 619
GluI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
GsaI CCCAGC 1 cut(s) 226
GsuI CTGGAG 1 cut(s) 780
HaeII RGCGCY 2 cut(s) 77, 621
HaeIII GGCC 3 cut(s) 84, 212, 350
HapII CCGG 5 cut(s) 78, 105, 182, 770, 1117
HgaI GACGC 3 cut(s) 110, 520, 613
HhaI GCGC 2 cut(s) 76, 620
Hin1I GRCGYC 2 cut(s) 74, 102
Hin1II CATG 8 cut(s) 28, 149, 349, 375, 976, 1006, 1183, 1396
Hin6I GCGC 2 cut(s) 74, 618
HinP1I GCGC 2 cut(s) 74, 618
HincII GTYRAC 2 cut(s) 329, 1288
HindII GTYRAC 2 cut(s) 329, 1288
HindIII AAGCTT 2 cut(s) 314, 944
HinfI GANTC 2 cut(s) 234, 1111
HpaI GTTAAC 1 cut(s) 1288
HpaII CCGG 5 cut(s) 78, 105, 182, 770, 1117
HphI GGTGA 3 cut(s) 59, 256, 1117
Hpy166II GTNNAC 3 cut(s) 329, 1021, 1288
Hpy188I TCNGA 5 cut(s) 43, 54, 90, 527, 1172
Hpy188III TCNNGA 8 cut(s) 25, 299, 341, 485, 770, 973, 1214, 1361
Hpy8I GTNNAC 3 cut(s) 329, 1021, 1288
Hpy99I CGWCG 1 cut(s) 1133
HpyAV CCTTC 2 cut(s) 277, 571
HpyCH4III ACNGT 4 cut(s) 10, 913, 1015, 1129
HpyF10VI GCNNNNNNNGC 4 cut(s) 428, 617, 788, 1264
HpyF3I CTNAG 2 cut(s) 42, 191
Hsp92I GRCGYC 2 cut(s) 74, 102
Hsp92II CATG 8 cut(s) 28, 149, 349, 375, 976, 1006, 1183, 1396
HspAI GCGC 2 cut(s) 74, 618
KasI GGCGCC 1 cut(s) 73
Kpn2I TCCGGA 1 cut(s) 769
KpnI GGTACC 1 cut(s) 157
Ksp22I TGATCA 1 cut(s) 49
KspAI GTTAAC 1 cut(s) 1288
KspI CCGCGG 1 cut(s) 1106
Kzo9I GATC 3 cut(s) 49, 703, 1075
LmnI GCTCC 4 cut(s) 22, 107, 184, 670
Lsp1109I GCAGC 2 cut(s) 623, 1138
LweI GCATC 7 cut(s) 47, 331, 518, 738, 1193, 1349, 1354
MabI ACCWGGT 1 cut(s) 959
MaeI CTAG 1 cut(s) 1214
MaeIII GTNAC 8 cut(s) 141, 262, 532, 625, 847, 1009, 1123, 1158
MalI GATC 3 cut(s) 51, 705, 1077
MboI GATC 3 cut(s) 49, 703, 1075
MboII GAAGA 5 cut(s) 106, 188, 275, 976, 1159
MhlI GDGCHC 2 cut(s) 112, 306
MlsI TGGCCA 1 cut(s) 350
MluCI AATT 6 cut(s) 32, 401, 765, 922, 1055, 1079
MluNI TGGCCA 1 cut(s) 350
Mly113I GGCGCC 1 cut(s) 74
MlyI GAGTC 1 cut(s) 243
MnlI CCTC 9 cut(s) 37, 64, 96, 440, 596, 804, 1221, 1270, 1283
Mox20I TGGCCA 1 cut(s) 350
Mph1103I ATGCAT 1 cut(s) 1208
MroI TCCGGA 1 cut(s) 769
MscI TGGCCA 1 cut(s) 350
MseI TTAA 5 cut(s) 459, 572, 582, 723, 1287
MslI CAYNNNNRTG 3 cut(s) 992, 1130, 1201
Msp20I TGGCCA 1 cut(s) 350
MspA1I CMGCKG 1 cut(s) 1105
MspCI CTTAAG 2 cut(s) 458, 571
MspI CCGG 5 cut(s) 78, 105, 182, 770, 1117
MspR9I CCNGG 2 cut(s) 78, 961
Mva1269I GAATGC 1 cut(s) 1206
MvaI CCWGG 1 cut(s) 961
MvnI CGCG 1 cut(s) 1105
MwoI GCNNNNNNNGC 4 cut(s) 428, 617, 788, 1264
NarI GGCGCC 1 cut(s) 74
NciI CCSGG 1 cut(s) 78
NdeII GATC 3 cut(s) 49, 703, 1075
NlaIII CATG 8 cut(s) 28, 149, 349, 375, 976, 1006, 1183, 1396
NlaIV GGNNCC 5 cut(s) 67, 75, 155, 180, 792
NmeAIII GCCGAG 2 cut(s) 94, 198
NmuCI GTSAC 6 cut(s) 262, 532, 625, 847, 1009, 1123
NsiI ATGCAT 1 cut(s) 1208
NspI RCATGY 2 cut(s) 149, 1396
OliI CACNNNNGTG 2 cut(s) 992, 1130
PagI TCATGA 2 cut(s) 24, 972
PciI ACATGT 2 cut(s) 145, 1392
PcsI WCGNNNNNNNCGW 1 cut(s) 134
PctI GAATGC 1 cut(s) 1206
PfeI GAWTC 1 cut(s) 1111
PflMI CCANNNNNTGG 1 cut(s) 904
PkrI GCNGC 5 cut(s) 16, 83, 638, 1104, 1153
PleI GAGTC 1 cut(s) 242
PluTI GGCGCC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 242
PpuMI RGGWCCY 1 cut(s) 365
PscI ACATGT 2 cut(s) 145, 1392
PshAI GACNNNNGTC 1 cut(s) 980
Psp124BI GAGCTC 1 cut(s) 112
Psp5II RGGWCCY 1 cut(s) 365
Psp6I CCWGG 1 cut(s) 959
PspEI GGTNACC 2 cut(s) 262, 1123
PspFI CCCAGC 1 cut(s) 222
PspGI CCWGG 1 cut(s) 959
PspN4I GGNNCC 5 cut(s) 67, 75, 155, 180, 792
PspPI GGNCC 3 cut(s) 83, 365, 392
PspPPI RGGWCCY 1 cut(s) 365
RsaI GTAC 3 cut(s) 155, 506, 697
RsaNI GTAC 3 cut(s) 154, 505, 696
RseI CAYNNNNRTG 3 cut(s) 992, 1130, 1201
SacI GAGCTC 1 cut(s) 112
SacII CCGCGG 1 cut(s) 1106
SaqAI TTAA 5 cut(s) 459, 572, 582, 723, 1287
SatI GCNGC 5 cut(s) 15, 82, 637, 1103, 1152
Sau3AI GATC 3 cut(s) 49, 703, 1075
Sau96I GGNCC 3 cut(s) 83, 365, 392
SchI GAGTC 1 cut(s) 243
ScrFI CCNGG 2 cut(s) 78, 961
SduI GDGCHC 2 cut(s) 112, 306
SexAI ACCWGGT 1 cut(s) 959
SfaNI GCATC 7 cut(s) 47, 331, 518, 738, 1193, 1349, 1354
SfcI CTRYAG 3 cut(s) 171, 835, 1335
SfoI GGCGCC 1 cut(s) 75
Sfr303I CCGCGG 1 cut(s) 1106
SgrBI CCGCGG 1 cut(s) 1106
SinI GGWCC 2 cut(s) 365, 392
SmiMI CAYNNNNRTG 3 cut(s) 992, 1130, 1201
SmlI CTYRAG 3 cut(s) 299, 458, 571
SmoI CTYRAG 3 cut(s) 299, 458, 571
Sse9I AATT 6 cut(s) 32, 401, 765, 922, 1055, 1079
SsiI CCGC 3 cut(s) 81, 1103, 1105
SspDI GGCGCC 1 cut(s) 73
SspI AATATT 1 cut(s) 383
SspMI CTAG 1 cut(s) 1214
SstI GAGCTC 1 cut(s) 112
StyD4I CCNGG 2 cut(s) 76, 959
StyI CCWWGG 1 cut(s) 249
TaaI ACNGT 4 cut(s) 10, 913, 1015, 1129
TaqI TCGA 1 cut(s) 340
TaqII GACCGA 2 cut(s) 380, 1111
TasI AATT 6 cut(s) 32, 401, 765, 922, 1055, 1079
TatI WGTACW 1 cut(s) 695
TauI GCSGC 2 cut(s) 84, 1105
TfiI GAWTC 1 cut(s) 1111
Tru1I TTAA 5 cut(s) 459, 572, 582, 723, 1287
Tru9I TTAA 5 cut(s) 459, 572, 582, 723, 1287
TscAI CASTG 3 cut(s) 634, 868, 1020
TseFI GTSAC 6 cut(s) 262, 532, 625, 847, 1009, 1123
TseI GCWGC 3 cut(s) 14, 636, 1151
Tsp45I GTSAC 6 cut(s) 262, 532, 625, 847, 1009, 1123
TspDTI ATGAA 4 cut(s) 13, 512, 1053, 1210
TspGWI ACGGA 2 cut(s) 189, 1079
TspRI CASTG 3 cut(s) 634, 868, 1020
Van91I CCANNNNNTGG 1 cut(s) 904
Vha464I CTTAAG 2 cut(s) 458, 571
VpaK11BI GGWCC 2 cut(s) 365, 392
XapI RAATTY 1 cut(s) 1055
XbaI TCTAGA 1 cut(s) 1213
XceI RCATGY 2 cut(s) 149, 1396
XcmI CCANNNNNNNNNTGG 1 cut(s) 314
XspI CTAG 1 cut(s) 1214
Zsp2I ATGCAT 1 cut(s) 1208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.