Prupe.2G094700_v2.0.a1

Zinc finger, C3HC4 type (RING finger)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0004489
Physical Location & Seq
Forward (+)
14922260 .. 14929406
7147 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G094700.1

Sequence Viewer

Length: 2604 bp
ATGACGGATTTTGAGCCGCTACAACAGAAGCCAGAATCCGCCGATGCCTGCGCCGATTTTGAGCGTGGATTTGAGGAATTCATGCGTGGGCACTTGGATGAATGTATGTCATTTGCATCATGTAGTTCTCCTCGTAATCCTGATGATGATGATGATGAGGGTGAGCAGCTCGTGCGGAGGAGACGGAGGTTGGATTTGGAGGGTGATGATTTAGCAGAGTCATCCGCTGCCCGACGCCACCACTCCCGGATTTTGAGCCGTTGGGCTGCGCGGCAGGCACAAGAAATGATAACTACCATTGAGAGGAGGAATCGTGAGTCTGAGCTGATGGCACTCGCAGGGCTGCATACGGTGTCGATGCTTGACTCCTCATTCTTGAGGGAGTCGCAGTCCCCTACTTCAAGGCGGCAGGGGGCTGTGGAGAGGCCAAGCACTCAGGCTTCTGCGATTTTGCAAATGTGGAGGGAGTTAGAGGATGAGCATGTGTTGAACAGAGCGCGTGAAAGGGTGAGGGAAAGGTTGAGGCATCGGAGAAGGGTTGAGTCTAATACTAATGAGTCGACCACTAATATGTCTGATAGTCGAGGGAGTGAGAATCAGGGTAGTTTGGTGGATGCGAGTGAGAGTGAGAATGAGTATGGGACTTGGTCACATGATCAGATGGCTTCACAACAAGAACGTGGCGCTAATGACGCGTCTAGTAGGGAGCAATCTCCTGATCTTGGCGAAGTTGAGAGGGAGAGAGTGAGGCAGATTGTACGAGGATGGATGGAAACTGGCATTAGTGATCATTCATCCAATGTTGCTCCGAGAAATAATAGTCCCAGAGCAGAGTGGCTTGGTGAGACAGAGCGTGAAAGGGTGAGAATTGTTCGTGAGTGGGTGCAAATGGCAAGTCAGCAAAGAGGAGCACGTGGGGGCCGAAGGGAAGATCAAGTTACGGGCGTTGGTGCTCAAGTTGATCGAGCTCGTGATGTTCCTGTTGCTGACCATGAAGAAGGCCAACCGGAGCACATTCGCAGGGACATGTTGAGGTTGCGCGGAAGACAAGCTATAATTGATTTGCTCGTGAGGATTGAGACGGAAAGACAAAGGGAGCTCCAATCTTTGGTGGAGCATCGGGCCGTCTCTGATTTTGCTCATCGTAACCGCATTCAGTCATTGCTAAGAGGTAGATTCTTACGAAATGAAAGACCCGTTGAAGAAGAAAGACCGCCTTCCATGGCTGCTGGTGAATTAGTTCAGTTGAGACAGCGACACACTGTTTCTGGATTAAGGGAAGGGTTCCGCTCCAGATTAGAAAACATTGTTCGTGGTCAAGTTGGCAGCCATACTGATTCTGCGACTAACAGTAACATTAATGATTCTAGAAGCGATCATACTCAAACAAATGCTTCACAAGATGTCCAACAAGAAAATCATGAGGAATTGCAGACTGGGAGTCATGGGACTGACGTCAATCTGTTGCCTGATCCAATGGGGAACTTGGAAAGCAACACAGCTGTTGAACGTCTCGATTGGCAAGAAACTGCTAATGAAGGAGGGAATTGGCAGGAGCCAATTGCTGAAGATGAGACACAAAACTGGCAGCAGACAACTTTCAGTCAATTCAATGAATGGAGAGATGGTAATGCTGAAGATACTGTTGAAAATTGGCAAGAAAATTCAGTCAATAATTGGCCTCAGGAGACTCCCAGAAATGTTGATGGAGAAACAGATCATCAGCAAGAAGCCCAGGGGATTTGGCAAGAGAATGGTTCTCGGGAAGCTGTTGGAAATTGGGCCGAAGGGCCTTCTGCTCCTGTGAGAAATCGTCGTTCTGTTCCAATTAGAAGATTCAATAGATTTCATCCACCAGATGATGACAACGTGTACAGTATGGAACTCAGGGAACTTTTGAGCAGGAGAAGTGTTTCCAATCTTCTTCGTAGCGGGTTCCGTGAAAGTCTGGACCATCTAATACAGTCATATGTCGAAAGGCAAAGTCGTTCTCCCATTGATTGGGATTTGCATAGGAATTTGCCAACACCAACTCCGGCTTCACCAGAGCAGGATCAGGAGCAACAGAGGGATGATCAGAATGAAGATCAACATGATGCCATCAACAGACCTTCACTTGTTCTACCATCTCCACCAGTGCCCCCACCACAGCCATTATGGCATCAGGACTTACATCACACTGGCTGGTCTCGTCATAGCATGCATCGTTCAGAAATCGAATGGGAGATGATTAATGATCTGAGAGCAGACATGGCAAGACTTCAGCAAGGCATGAGCCACATGCAGAGGATGTTGGAGGCCTGCATGGATATGCAATTGGAGTTGCAACGTTCTGTCAGACAGGAAGTTTCTGCAGCTCTGAATCGTTCATCTGGTGAAAAAGGGTTAGGCGCTGAGACATCAGAGGATGGGTCTAAATGGGGTCATGTGAGAAAAGGGACTTGTTGTGTTTGTTGTGATAGTCACATCGATTCTCTCTTGTACAGATGTGGGCACATGTGCACTTGTTCAAAATGTGCAAACGAGTTGGTTCGTGGCGGAGGGAAGTGCCCACTTTGTCGAGCACCGATTGTTGAGGTGATTCGAGCCTACTCCATACTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

868

Amino Acids

99.48

Weight (kDa)

5.38

Isoelectric Point (pI)

67.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1458
AccB7I CCANNNNNTGG 2 cut(s) 1108, 2001
AccBSI CCGCTC 1 cut(s) 1290
AccI GTMKAC 1 cut(s) 560
AccII CGCG 4 cut(s) 271, 499, 695, 1041
AclI AACGTT 1 cut(s) 2329
AclWI GGATC 2 cut(s) 1466, 2061
AcsI RAATTY 3 cut(s) 77, 1663, 2017
AcuI CTGAAG 3 cut(s) 1587, 1656, 2246
AcvI CACGTG 1 cut(s) 914
AcyI GRCGYC 2 cut(s) 235, 1455
AfaI GTAC 3 cut(s) 759, 1874, 2483
AfiI CCNNNNNNNGG 4 cut(s) 303, 722, 1108, 2001
AflIII ACRYGT 4 cut(s) 693, 1026, 1869, 2496
AgsI TTSAA 8 cut(s) 402, 490, 1202, 1508, 1612, 1649, 1840, 2511
AhdI GACNNNNNGTC 1 cut(s) 1440
AjnI CCWGG 1 cut(s) 1734
AjuI GAANNNNNNNTTGG 2 cut(s) 2023, 2055
AluBI AGCT 8 cut(s) 169, 325, 968, 1052, 1099, 1502, 1769, 2357
AluI AGCT 8 cut(s) 169, 325, 968, 1052, 1099, 1502, 1769, 2357
Alw21I GWGCWC 7 cut(s) 913, 955, 970, 1014, 1101, 2504, 2566
Alw44I GTGCAC 1 cut(s) 2500
AlwI GGATC 2 cut(s) 1466, 2061
Ama87I CYCGRG 1 cut(s) 1761
AoxI GGCC 8 cut(s) 425, 919, 1000, 1122, 1679, 1782, 1790, 2298
ApaLI GTGCAC 1 cut(s) 2500
ApeKI GCWGC 8 cut(s) 166, 227, 266, 343, 1226, 1326, 1588, 2354
ApoI RAATTY 3 cut(s) 77, 1663, 2017
ArsI GACNNNNNNTTYG 2 cut(s) 880, 912
AseI ATTAAT 2 cut(s) 1359, 2232
Asp700I GAANNNNTTC 2 cut(s) 1239, 1912
AspLEI GCGC 6 cut(s) 53, 271, 499, 686, 1041, 2393
AspS9I GGNCC 5 cut(s) 919, 1122, 1782, 1790, 1951
AsuC2I CCSGG 1 cut(s) 247
AsuHPI GGTGA 9 cut(s) 173, 215, 520, 854, 874, 1244, 2034, 2387, 2590
AvaI CYCGRG 1 cut(s) 1761
AvaII GGWCC 1 cut(s) 1951
AxyI CCTNAGG 1 cut(s) 1683
BaeGI GKGCMC 5 cut(s) 93, 2142, 2496, 2504, 2552
BanII GRGCYC 2 cut(s) 970, 1101
BarI GAAGNNNNNNTAC 2 cut(s) 1363, 1395
BauI CACGAG 3 cut(s) 170, 969, 1067
BbrPI CACGTG 1 cut(s) 914
BbsI GAAGAC 1 cut(s) 1051
Bbv12I GWGCWC 7 cut(s) 913, 955, 970, 1014, 1101, 2504, 2566
BbvI GCAGC 8 cut(s) 178, 214, 253, 330, 1213, 1338, 1600, 2366
BceAI ACGGC 2 cut(s) 243, 1109
BciT130I CCWGG 1 cut(s) 1736
BclI TGATCA 3 cut(s) 655, 787, 2074
BcnI CCSGG 1 cut(s) 247
BfaI CTAG 2 cut(s) 699, 1368
BfmI CTRYAG 1 cut(s) 2352
BfoI RGCGCY 2 cut(s) 687, 2394
BglI GCCNNNNNGGC 1 cut(s) 2158
Bme1390I CCNGG 2 cut(s) 247, 1736
Bme18I GGWCC 1 cut(s) 1951
BmeRI GACNNNNNGTC 1 cut(s) 1440
BmeT110I CYCGRG 1 cut(s) 1761
BmgT120I GGNCC 5 cut(s) 919, 1122, 1782, 1790, 1951
BmiI GGNNCC 4 cut(s) 920, 1286, 1557, 1937
BmrFI CCNGG 2 cut(s) 247, 1736
BmrI ACTGGG 1 cut(s) 1446
BmsI GCATC 9 cut(s) 34, 125, 348, 535, 604, 1126, 2086, 2170, 2212
BmuI ACTGGG 1 cut(s) 1446
BoxI GACNNNNGTC 1 cut(s) 1454
BpiI GAAGAC 1 cut(s) 1051
BpmI CTGGAG 1 cut(s) 1276
BpuEI CTTGAG 2 cut(s) 397, 939
BpuMI CCSGG 1 cut(s) 247
Bsa29I ATCGAT 1 cut(s) 2469
BsaAI YACGTR 1 cut(s) 914
BsaHI GRCGYC 2 cut(s) 235, 1455
BsaI GGTCTC 1 cut(s) 2193
BsaJI CCNNGG 3 cut(s) 1221, 1734, 1735
BsaWI WCCGGW 1 cut(s) 1006
BsaXI ACNNNNNCTCC 8 cut(s) 298, 328, 374, 404, 1612, 1642, 2017, 2047
Bsc4I CCNNNNNNNGG 4 cut(s) 303, 722, 1108, 2001
Bse1I ACTGG 5 cut(s) 781, 1441, 1589, 2135, 2185
Bse21I CCTNAGG 1 cut(s) 1683
Bse3DI GCAATG 1 cut(s) 1160
BseBI CCWGG 1 cut(s) 1736
BseCI ATCGAT 1 cut(s) 2469
BseDI CCNNGG 3 cut(s) 1221, 1734, 1735
BseLI CCNNNNNNNGG 4 cut(s) 303, 722, 1108, 2001
BseMI GCAATG 1 cut(s) 1160
BseMII CTCAG 6 cut(s) 312, 449, 1697, 1900, 2231, 2385
BseNI ACTGG 5 cut(s) 781, 1441, 1589, 2135, 2185
BseRI GAGGAG 5 cut(s) 120, 193, 319, 358, 921
BseSI GKGCMC 5 cut(s) 93, 2142, 2496, 2504, 2552
BseXI GCAGC 8 cut(s) 178, 214, 253, 330, 1213, 1338, 1600, 2366
Bsh1236I CGCG 4 cut(s) 271, 499, 695, 1041
BshFI GGCC 8 cut(s) 427, 921, 1002, 1124, 1681, 1784, 1792, 2300
BshVI ATCGAT 1 cut(s) 2469
BsiHKAI GWGCWC 7 cut(s) 913, 955, 970, 1014, 1101, 2504, 2566
BsiHKCI CYCGRG 1 cut(s) 1761
BsiSI CCGG 3 cut(s) 247, 1007, 2036
BslFI GGGAC 6 cut(s) 376, 655, 807, 1037, 1462, 2452
BslI CCNNNNNNNGG 4 cut(s) 303, 722, 1108, 2001
BsmBI CGTCTC 4 cut(s) 175, 1073, 1132, 1517
BsmFI GGGAC 6 cut(s) 376, 655, 807, 1037, 1462, 2452
BsmI GAATGC 1 cut(s) 1152
BsnI GGCC 8 cut(s) 427, 921, 1002, 1124, 1681, 1784, 1792, 2300
Bso31I GGTCTC 1 cut(s) 2193
BsoBI CYCGRG 1 cut(s) 1761
Bsp1407I TGTACA 2 cut(s) 1872, 2481
Bsp19I CCATGG 1 cut(s) 1221
BspANI GGCC 8 cut(s) 427, 921, 1002, 1124, 1681, 1784, 1792, 2300
BspCNI CTCAG 6 cut(s) 313, 448, 1696, 1899, 2232, 2386
BspDI ATCGAT 1 cut(s) 2469
BspFNI CGCG 4 cut(s) 271, 499, 695, 1041
BspHI TCATGA 1 cut(s) 1420
BspLI GGNNCC 4 cut(s) 920, 1286, 1557, 1937
BspMAI CTGCAG 1 cut(s) 2356
BspPI GGATC 2 cut(s) 1466, 2061
BspTNI GGTCTC 1 cut(s) 2193
BsrBI CCGCTC 1 cut(s) 1290
BsrDI GCAATG 1 cut(s) 1160
BsrGI TGTACA 2 cut(s) 1872, 2481
BsrI ACTGG 5 cut(s) 781, 1441, 1589, 2135, 2185
BssECI CCNNGG 3 cut(s) 1221, 1734, 1735
BssNI GRCGYC 2 cut(s) 235, 1455
BssSI CACGAG 3 cut(s) 170, 969, 1067
BssT1I CCWWGG 1 cut(s) 1221
Bst2BI CACGAG 3 cut(s) 170, 969, 1067
Bst2UI CCWGG 1 cut(s) 1736
Bst4CI ACNGT 7 cut(s) 352, 1264, 1352, 1645, 1877, 1965, 2601
BstACI GRCGYC 2 cut(s) 235, 1455
BstAPI GCANNNNNTGC 1 cut(s) 172
BstAUI TGTACA 2 cut(s) 1872, 2481
BstBAI YACGTR 1 cut(s) 914
BstC8I GCNNGC 4 cut(s) 49, 276, 2201, 2302
BstDEI CTNAG 7 cut(s) 321, 435, 1166, 1683, 1886, 2240, 2394
BstDSI CCRYGG 1 cut(s) 1221
BstFNI CGCG 4 cut(s) 271, 499, 695, 1041
BstH2I RGCGCY 2 cut(s) 687, 2394
BstHHI GCGC 6 cut(s) 53, 271, 499, 686, 1041, 2393
BstMWI GCNNNNNNNGC 5 cut(s) 172, 275, 692, 2158, 2252
BstNI CCWGG 1 cut(s) 1736
BstNSI RCATGY 5 cut(s) 485, 1030, 2203, 2284, 2500
BstPAI GACNNNNGTC 1 cut(s) 1454
BstSCI CCNGG 2 cut(s) 245, 1734
BstSFI CTRYAG 1 cut(s) 2352
BstSLI GKGCMC 5 cut(s) 93, 2142, 2496, 2504, 2552
BstUI CGCG 4 cut(s) 271, 499, 695, 1041
BstV1I GCAGC 8 cut(s) 178, 214, 253, 330, 1213, 1338, 1600, 2366
BstV2I GAAGAC 1 cut(s) 1051
Bsu15I ATCGAT 1 cut(s) 2469
Bsu36I CCTNAGG 1 cut(s) 1683
BsuRI GGCC 8 cut(s) 427, 921, 1002, 1124, 1681, 1784, 1792, 2300
BsuTUI ATCGAT 1 cut(s) 2469
BtgI CCRYGG 1 cut(s) 1221
BtsIMutI CAGTG 3 cut(s) 1260, 2142, 2178
Cac8I GCNNGC 4 cut(s) 49, 276, 2201, 2302
CciI TCATGA 1 cut(s) 1420
CfoI GCGC 6 cut(s) 53, 271, 499, 686, 1041, 2393
Cfr13I GGNCC 5 cut(s) 919, 1122, 1782, 1790, 1951
ClaI ATCGAT 1 cut(s) 2469
CseI GACGC 3 cut(s) 243, 684, 701
Csp6I GTAC 3 cut(s) 758, 1873, 2482
CviQI GTAC 3 cut(s) 758, 1873, 2482
DdeI CTNAG 7 cut(s) 321, 435, 1166, 1683, 1886, 2240, 2394
DriI GACNNNNNGTC 1 cut(s) 1440
Eam1105I GACNNNNNGTC 1 cut(s) 1440
EciI GGCGGA 2 cut(s) 28, 2553
Ecl136II GAGCTC 2 cut(s) 968, 1099
Eco130I CCWWGG 1 cut(s) 1221
Eco147I AGGCCT 1 cut(s) 2300
Eco24I GRGCYC 2 cut(s) 970, 1101
Eco31I GGTCTC 1 cut(s) 2193
Eco47I GGWCC 1 cut(s) 1951
Eco53kI GAGCTC 2 cut(s) 968, 1099
Eco57I CTGAAG 3 cut(s) 1587, 1656, 2246
Eco72I CACGTG 1 cut(s) 914
Eco81I CCTNAGG 1 cut(s) 1683
Eco88I CYCGRG 1 cut(s) 1761
EcoICRI GAGCTC 2 cut(s) 968, 1099
EcoO109I RGGNCCY 1 cut(s) 1790
EcoRI GAATTC 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 1734
EcoT14I CCWWGG 1 cut(s) 1221
EcoT22I ATGCAT 1 cut(s) 2205
EcoT38I GRGCYC 2 cut(s) 970, 1101
ErhI CCWWGG 1 cut(s) 1221
Esp3I CGTCTC 4 cut(s) 175, 1073, 1132, 1517
FalI AAGNNNNNCTT 2 cut(s) 1201, 1233
FaqI GGGAC 6 cut(s) 376, 655, 807, 1037, 1462, 2452
FauI CCCGC 1 cut(s) 1925
FauNDI CATATG 1 cut(s) 1969
FbaI TGATCA 3 cut(s) 655, 787, 2074
FblI GTMKAC 1 cut(s) 560
FriOI GRGCYC 2 cut(s) 970, 1101
FspBI CTAG 2 cut(s) 699, 1368
GlaI GCGC 6 cut(s) 52, 270, 498, 685, 1040, 2392
GsuI CTGGAG 1 cut(s) 1276
HaeII RGCGCY 2 cut(s) 687, 2394
HaeIII GGCC 8 cut(s) 427, 921, 1002, 1124, 1681, 1784, 1792, 2300
HapII CCGG 3 cut(s) 247, 1007, 2036
HgaI GACGC 3 cut(s) 243, 684, 701
HhaI GCGC 6 cut(s) 53, 271, 499, 686, 1041, 2393
Hin1I GRCGYC 2 cut(s) 235, 1455
Hin6I GCGC 6 cut(s) 51, 269, 497, 684, 1039, 2391
HinP1I GCGC 6 cut(s) 51, 269, 497, 684, 1039, 2391
HincII GTYRAC 1 cut(s) 561
HindII GTYRAC 1 cut(s) 561
HpaII CCGG 3 cut(s) 247, 1007, 2036
HphI GGTGA 9 cut(s) 173, 215, 520, 854, 874, 1244, 2034, 2387, 2590
Hpy166II GTNNAC 3 cut(s) 561, 1873, 2502
Hpy8I GTNNAC 3 cut(s) 561, 1873, 2502
Hpy99I CGWCG 2 cut(s) 237, 1818
HpyAV CCTTC 9 cut(s) 528, 918, 992, 1227, 1274, 1532, 1781, 1803, 2121
HpyCH4III ACNGT 7 cut(s) 352, 1264, 1352, 1645, 1877, 1965, 2601
HpyCH4IV ACGT 6 cut(s) 679, 913, 1455, 1510, 1869, 2329
HpyF10VI GCNNNNNNNGC 5 cut(s) 172, 275, 692, 2158, 2252
HpyF3I CTNAG 7 cut(s) 321, 435, 1166, 1683, 1886, 2240, 2394
HpySE526I ACGT 6 cut(s) 679, 913, 1455, 1510, 1869, 2329
Hsp92I GRCGYC 2 cut(s) 235, 1455
HspAI GCGC 6 cut(s) 51, 269, 497, 684, 1039, 2391
Ksp22I TGATCA 3 cut(s) 655, 787, 2074
Lsp1109I GCAGC 8 cut(s) 178, 214, 253, 330, 1213, 1338, 1600, 2366
LweI GCATC 9 cut(s) 34, 125, 348, 535, 604, 1126, 2086, 2170, 2212
MaeI CTAG 2 cut(s) 699, 1368
MaeII ACGT 6 cut(s) 679, 913, 1455, 1510, 1869, 2329
MaeIII GTNAC 5 cut(s) 648, 937, 1145, 1352, 2462
MbiI CCGCTC 1 cut(s) 1290
MfeI CAATTG 2 cut(s) 1560, 2315
MluI ACGCGT 1 cut(s) 693
MlyI GAGTC 8 cut(s) 227, 326, 359, 392, 551, 566, 1450, 1684
MmeI TCCRAC 4 cut(s) 171, 1432, 1753, 2274
Mph1103I ATGCAT 1 cut(s) 2205
MroXI GAANNNNTTC 2 cut(s) 1239, 1912
MseI TTAA 3 cut(s) 1274, 1359, 2232
MslI CAYNNNNRTG 3 cut(s) 96, 569, 2309
MspA1I CMGCKG 2 cut(s) 227, 1502
MspI CCGG 3 cut(s) 247, 1007, 2036
MspR9I CCNGG 2 cut(s) 247, 1736
MunI CAATTG 2 cut(s) 1560, 2315
Mva1269I GAATGC 1 cut(s) 1152
MvaI CCWGG 1 cut(s) 1736
MvnI CGCG 4 cut(s) 271, 499, 695, 1041
MwoI GCNNNNNNNGC 5 cut(s) 172, 275, 692, 2158, 2252
NciI CCSGG 1 cut(s) 247
NcoI CCATGG 1 cut(s) 1221
NdeI CATATG 1 cut(s) 1969
NlaIV GGNNCC 4 cut(s) 920, 1286, 1557, 1937
NmuCI GTSAC 2 cut(s) 648, 2462
NsiI ATGCAT 1 cut(s) 2205
NspI RCATGY 5 cut(s) 485, 1030, 2203, 2284, 2500
PaeI GCATGC 1 cut(s) 2203
PagI TCATGA 1 cut(s) 1420
PasI CCCWGGG 1 cut(s) 1735
PceI AGGCCT 1 cut(s) 2300
PciI ACATGT 2 cut(s) 1026, 2496
PcsI WCGNNNNNNNCGW 1 cut(s) 919
PctI GAATGC 1 cut(s) 1152
PdmI GAANNNNTTC 2 cut(s) 1239, 1912
PflFI GACNNNGTC 1 cut(s) 646
PflMI CCANNNNNTGG 2 cut(s) 1108, 2001
PfoI TCCNGGA 1 cut(s) 245
PleI GAGTC 8 cut(s) 226, 325, 359, 391, 550, 565, 1449, 1684
PmaCI CACGTG 1 cut(s) 914
PmlI CACGTG 1 cut(s) 914
PpsI GAGTC 8 cut(s) 226, 325, 359, 391, 550, 565, 1449, 1684
Ppu21I YACGTR 1 cut(s) 914
PscI ACATGT 2 cut(s) 1026, 2496
PshAI GACNNNNGTC 1 cut(s) 1454
PshBI ATTAAT 2 cut(s) 1359, 2232
Psp124BI GAGCTC 2 cut(s) 970, 1101
Psp1406I AACGTT 1 cut(s) 2329
Psp6I CCWGG 1 cut(s) 1734
PspCI CACGTG 1 cut(s) 914
PspGI CCWGG 1 cut(s) 1734
PspN4I GGNNCC 4 cut(s) 920, 1286, 1557, 1937
PspPI GGNCC 5 cut(s) 919, 1122, 1782, 1790, 1951
PstI CTGCAG 1 cut(s) 2356
PsyI GACNNNGTC 1 cut(s) 646
PvuII CAGCTG 1 cut(s) 1502
RsaI GTAC 3 cut(s) 759, 1874, 2483
RsaNI GTAC 3 cut(s) 758, 1873, 2482
RseI CAYNNNNRTG 3 cut(s) 96, 569, 2309
SacI GAGCTC 2 cut(s) 970, 1101
SalI GTCGAC 1 cut(s) 559
SaqAI TTAA 3 cut(s) 1274, 1359, 2232
Sau96I GGNCC 5 cut(s) 919, 1122, 1782, 1790, 1951
SchI GAGTC 8 cut(s) 227, 326, 359, 392, 551, 566, 1450, 1684
ScrFI CCNGG 2 cut(s) 247, 1736
SfaNI GCATC 9 cut(s) 34, 125, 348, 535, 604, 1126, 2086, 2170, 2212
SfcI CTRYAG 1 cut(s) 2352
SinI GGWCC 1 cut(s) 1951
SmiMI CAYNNNNRTG 3 cut(s) 96, 569, 2309
SmlI CTYRAG 2 cut(s) 376, 954
SmoI CTYRAG 2 cut(s) 376, 954
SphI GCATGC 1 cut(s) 2203
SseBI AGGCCT 1 cut(s) 2300
SspMI CTAG 2 cut(s) 699, 1368
SstI GAGCTC 2 cut(s) 970, 1101
StuI AGGCCT 1 cut(s) 2300
StyD4I CCNGG 2 cut(s) 245, 1734
StyI CCWWGG 1 cut(s) 1221
TaaI ACNGT 7 cut(s) 352, 1264, 1352, 1645, 1877, 1965, 2601
TaiI ACGT 6 cut(s) 682, 916, 1458, 1513, 1872, 2332
TatI WGTACW 2 cut(s) 1872, 2481
TauI GCSGC 3 cut(s) 19, 274, 409
Tru1I TTAA 3 cut(s) 1274, 1359, 2232
Tru9I TTAA 3 cut(s) 1274, 1359, 2232
TscAI CASTG 3 cut(s) 1267, 2142, 2185
TseFI GTSAC 2 cut(s) 648, 2462
TseI GCWGC 8 cut(s) 166, 227, 266, 343, 1226, 1326, 1588, 2354
Tsp45I GTSAC 2 cut(s) 648, 2462
TspGWI ACGGA 4 cut(s) 20, 199, 1097, 1928
TspRI CASTG 3 cut(s) 1267, 2142, 2185
Tth111I GACNNNGTC 1 cut(s) 646
Van91I CCANNNNNTGG 2 cut(s) 1108, 2001
VneI GTGCAC 1 cut(s) 2500
VpaK11BI GGWCC 1 cut(s) 1951
VspI ATTAAT 2 cut(s) 1359, 2232
XapI RAATTY 3 cut(s) 77, 1663, 2017
XbaI TCTAGA 1 cut(s) 1367
XceI RCATGY 5 cut(s) 485, 1030, 2203, 2284, 2500
XcmI CCANNNNNNNNNTGG 1 cut(s) 2154
XmiI GTMKAC 1 cut(s) 560
XmnI GAANNNNTTC 2 cut(s) 1239, 1912
XspI CTAG 2 cut(s) 699, 1368
ZraI GACGTC 1 cut(s) 1456
Zsp2I ATGCAT 1 cut(s) 2205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.