Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003659

Physical Location & Seq

Genomic Coordinates Reverse (-)

2011245 .. 2016583

Gene Structure 5339 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G06580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGCTTTCGCTTCAAAATTCGCTCGTTCTAAAACTATTCTCTCTTTTCTCCGGCCTTGTCGTCAGCTCCACTCGACGCCCAAGTCAACCGGTGACGTGACCGTACTTTCTCCGGTGAAGGGACGCCGGAGACTTCCAACTTGCTGGTCGAGCTCTCTGTTCCCATTGGCGATAGCTGCCTCCGCCACTTCTTTCGCTTACCTGAATCTGTCGAATCCTTCTATCAGTGAATCATCATCGGCTTTGGATTCAAGAGATATAACTGTTGGTGGAAAAGATAGCACTGAAGCTGTTGTTAAAGGAGAATACAAACAAGTCCCTAAGGAGCTTATTTCTCAATTGAAAACTATCCTCGAGGATAACTTGACAACTGACTACGATGAGAGGTACTTCCATGGGAAGCCCCAGAACAGTTTTCACAAGGCAGTCAACATTCCTGATGTCGTTGTTTTCCCTAGGTCCGAAGAAGAAGTCTCCAAGATTCTTAAATCCTGCAATGAATATAAGGTTCCTATTGTACCATATGGTGGGGCAACATCGATCGAGGGTCATACCCTTGCTCCAAAAGGAGGTGTGTGCATTGACATGTCATTAATGAAGAGGGTGAAAGCATTACATGTGGAGGATATGGATGTTATTGTTGAGCCTGGAATTGGTTGGCTGGAGCTTAATGAATATTTGGAAGAGTATGGTCTATTCTTTCCTCTTGATCCAGGACCTGGTGCCTCCATAGGAGGCATGTGTGCTACGCGTTGCTCTGGCTCTTTAGCTGTAAGGTATGGAACTATGCGTGACAATGTTATAAGCCTCAAGGTGGTTCTTCCTAATGGAGATGTTGTGAAGACAGCTTCACGTGCCAGAAAGAGTGCTGCTGGATACGATTTGACTCGCTTGATAATTGGGAGTGAGGGTACTTTAGGAGTCATTACTGAGATTACTCTCCGACTTCAGAAAATCCCACAGCATTCAGTGGTGGCAGTTTGCAATTTCCCTACAGTTAAGGATGCTGCAGACGTGGCCATTGCCACTATGATGTCTGGAATACAGGTGTCAAGAGTGGAACTCCTTGACGAGGTTCAAATCAGAGCTATTAATATGGCAAACGGGAAAAATTTGACTGAAGCTCCAACTCTGATGTTCGAGTTTATAGGAACAGAGGCATATACACGTGAGCAGACGCAAATTGTTCAGCAAATTGCTTCCAAACACAATGGATCAGACTTTATGTTCGCAGAAGAACCTGAAGCAAAAAAAGAACTCTGGAAGATAAGAAAAGAGGCGCTGTGGGCTTGCTATGCTATGGCGCCAGGTCATGAAGCAATGATTACAGATGTCTGTGTCCCTTTATCTCACCTTGCAGAACTCATATCAAGATCCAAAAAAGAGCTTGATGCATCATCGTTGTTGTGTACCGTTATTGCTCATGCCGGAGATGGAAACTTTCACACATGTATTATGTTTGATCCAAGCAGTGAAGAGCAGAGAAGAGAAGCAGAAAGACTGAACCACTTTATGGTTCACAGTGCACTGTCCATGGATGGAACATGTACTGGAGAACACGGTGTTGGAACAGGAAAAATGAAGTATCTGGAGAAGGAACTGGGAATAGAAGCACTGCAAACTATGAAGAGAATCAAGAAAACGTTGGACCCAAACGATATCATGAACCCGGGAAAGTTAATTCCTCCTCATGTATGTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003973 GO:0004457 GO:0004458 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006081 GO:0008144 GO:0008150 GO:0008152 GO:0008720 GO:0008891 GO:0009056 GO:0009438 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0016898 GO:0016899 GO:0017076 GO:0019154 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042180 GO:0042182 GO:0042802 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046185 GO:0048037 GO:0050660 GO:0050662 GO:0051596 GO:0055114 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

FAD-oxidase_C FAD_binding_4

Protein Analysis

567

Amino Acids

62.17

Weight (kDa)

6.45

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	146 - 282	5.8e-38	FAD binding domain
FAD-oxidase_C	PF02913	319 - 560	5.8e-75	FAD linked oxidases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06580
fragaria_vesca	FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120
malus_domestica	MD12G1046600.v1.1 MD12G1046700.v1.1 MD14G1045600.v1.1
prunus_persica	Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1
pyrus_communis	pycom12g04020 pycom12g04030
rosa_chinensis	RchiOBHm_Chr3g0477531
rosa_laevigata	RLG00000023711
rosa_multiflora	Rmu_co8386717.1_g000001 Rmu_sc0000775.1_g000016
rosa_roxburghii	Rroxscaffold_6G00403860 Rroxscaffold_6G00403870 Rroxscaffold_6G00404560
rosa_rugosa	Rorug03G0161800
rosa_samantha	Rh3AG211800 Rh3BG245600 Rh3CG239200 Rh3DG238700
rosa_wichuraiana	Rw3G019190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	803
AasI	GACNNNNNNGTC	1 cut(s)	82
AbsI	CCTCGAGG	1 cut(s)	353
AccB1I	GGYRCC	2 cut(s)	722, 1303
AccB7I	CCANNNNNTGG	3 cut(s)	527, 719, 1513
AccII	CGCG	1 cut(s)	751
AciI	CCGC	1 cut(s)	183
AclI	AACGTT	1 cut(s)	1643
AclWI	GGATC	4 cut(s)	704, 1222, 1368, 1457
AcoI	YGGCCR	1 cut(s)	1017
AcsI	RAATTY	2 cut(s)	17, 1111
AcuI	CTGAAG	4 cut(s)	306, 932, 1140, 1263
AcvI	CACGTG	2 cut(s)	854, 1169
AcyI	GRCGYC	3 cut(s)	77, 124, 1304
AfaI	GTAC	6 cut(s)	105, 389, 519, 913, 1411, 1549
AfiI	CCNNNNNNNGG	8 cut(s)	119, 527, 569, 653, 719, 814, 1072, 1513
AflIII	ACRYGT	6 cut(s)	585, 616, 749, 1166, 1448, 1544
AgeI	ACCGGT	1 cut(s)	89
AgsI	TTSAA	4 cut(s)	15, 252, 343, 1079
AjiI	CACGTC	2 cut(s)	97, 1015
AjnI	CCWGG	4 cut(s)	646, 712, 718, 1306
AjuI	GAANNNNNNNTTGG	2 cut(s)	1548, 1580
Alw21I	GWGCWC	2 cut(s)	155, 1528
Alw26I	GTCTC	2 cut(s)	124, 478
Alw44I	GTGCAC	1 cut(s)	1524
AlwI	GGATC	4 cut(s)	704, 1222, 1368, 1457
AlwNI	CAGNNNCTG	1 cut(s)	719
Ama87I	CYCGRG	2 cut(s)	353, 1669
AoxI	GGCC	2 cut(s)	53, 1017
ApaLI	GTGCAC	1 cut(s)	1524
ApeKI	GCWGC	3 cut(s)	176, 869, 1007
ApoI	RAATTY	2 cut(s)	17, 1111
ArsI	GACNNNNNNTTYG	4 cut(s)	456, 488, 1211, 1243
AseI	ATTAAT	2 cut(s)	593, 1092
AsiGI	ACCGGT	1 cut(s)	89
AspA2I	CCTAGG	1 cut(s)	455
AspLEI	GCGC	2 cut(s)	1282, 1306
AspS9I	GGNCC	3 cut(s)	459, 716, 1648
AsuC2I	CCSGG	2 cut(s)	1670, 1671
AsuHPI	GGTGA	4 cut(s)	104, 127, 616, 1343
AvaI	CYCGRG	2 cut(s)	353, 1669
AvaII	GGWCC	3 cut(s)	459, 716, 1648
AvrII	CCTAGG	1 cut(s)	455
AxyI	CCTNAGG	1 cut(s)	321
BaeGI	GKGCMC	1 cut(s)	1528
BalI	TGGCCA	1 cut(s)	1019
BanI	GGYRCC	2 cut(s)	722, 1303
BanII	GRGCYC	1 cut(s)	155
BbrPI	CACGTG	2 cut(s)	854, 1169
BbsI	GAAGAC	1 cut(s)	848
Bbv12I	GWGCWC	2 cut(s)	155, 1528
BbvI	GCAGC	3 cut(s)	163, 856, 994
BccI	CCATC	2 cut(s)	1427, 1532
BciT130I	CCWGG	4 cut(s)	648, 714, 720, 1308
BciVI	GTATCC	1 cut(s)	869
BcnI	CCSGG	2 cut(s)	1670, 1671
BcoDI	GTCTC	2 cut(s)	124, 478
BfaI	CTAG	1 cut(s)	456
BfmI	CTRYAG	2 cut(s)	993, 1008
BfoI	RGCGCY	2 cut(s)	1283, 1307
BfuI	GTATCC	1 cut(s)	869
BisI	GCNGC	3 cut(s)	177, 870, 1008
BlnI	CCTAGG	1 cut(s)	455
BlsI	GCNGC	3 cut(s)	178, 871, 1009
Bme1390I	CCNGG	6 cut(s)	648, 714, 720, 1308, 1670, 1671
Bme18I	GGWCC	3 cut(s)	459, 716, 1648
BmeT110I	CYCGRG	2 cut(s)	353, 1669
BmgBI	CACGTC	2 cut(s)	97, 1015
BmgT120I	GGNCC	3 cut(s)	459, 716, 1648
BmiI	GGNNCC	4 cut(s)	510, 724, 1305, 1650
BmrFI	CCNGG	6 cut(s)	648, 714, 720, 1308, 1670, 1671
BmrI	ACTGGG	1 cut(s)	1610
BmsI	GCATC	3 cut(s)	994, 1381, 1403
BmuI	ACTGGG	1 cut(s)	1610
BpiI	GAAGAC	1 cut(s)	848
BplI	GAGNNNNNCTC	2 cut(s)	1047, 1079
BpmI	CTGGAG	3 cut(s)	683, 1572, 1610
BpuEI	CTTGAG	1 cut(s)	794
BpuMI	CCSGG	2 cut(s)	1670, 1671
Bsa29I	ATCGAT	1 cut(s)	539
BsaAI	YACGTR	2 cut(s)	854, 1169
BsaHI	GRCGYC	3 cut(s)	77, 124, 1304
BsaJI	CCNNGG	4 cut(s)	394, 455, 1533, 1669
BsaWI	WCCGGW	2 cut(s)	89, 112
BsaXI	ACNNNNNCTCC	8 cut(s)	544, 574, 822, 852, 895, 925, 1108, 1138
Bsc4I	CCNNNNNNNGG	8 cut(s)	119, 527, 569, 653, 719, 814, 1072, 1513
Bse118I	RCCGGY	1 cut(s)	89
Bse1I	ACTGG	2 cut(s)	1555, 1605
Bse21I	CCTNAGG	1 cut(s)	321
Bse3DI	GCAATG	3 cut(s)	502, 1020, 1326
BseBI	CCWGG	4 cut(s)	648, 714, 720, 1308
BseCI	ATCGAT	1 cut(s)	539
BseDI	CCNNGG	4 cut(s)	394, 455, 1533, 1669
BseGI	GGATG	3 cut(s)	637, 1009, 1543
BseLI	CCNNNNNNNGG	8 cut(s)	119, 527, 569, 653, 719, 814, 1072, 1513
BseMI	GCAATG	3 cut(s)	502, 1020, 1326
BseMII	CTCAG	1 cut(s)	921
BseNI	ACTGG	2 cut(s)	1555, 1605
BseRI	GAGGAG	1 cut(s)	1677
BseSI	GKGCMC	1 cut(s)	1528
BseXI	GCAGC	3 cut(s)	163, 856, 994
Bsh1236I	CGCG	1 cut(s)	751
Bsh1285I	CGRYCG	1 cut(s)	543
BshFI	GGCC	2 cut(s)	55, 1019
BshNI	GGYRCC	2 cut(s)	722, 1303
BshTI	ACCGGT	1 cut(s)	89
BshVI	ATCGAT	1 cut(s)	539
BsiEI	CGRYCG	1 cut(s)	543
BsiHKAI	GWGCWC	2 cut(s)	155, 1528
BsiHKCI	CYCGRG	2 cut(s)	353, 1669
BsiSI	CCGG	6 cut(s)	52, 90, 113, 127, 1428, 1670
BslFI	GGGAC	3 cut(s)	135, 302, 1325
BslI	CCNNNNNNNGG	8 cut(s)	119, 527, 569, 653, 719, 814, 1072, 1513
BsmAI	GTCTC	2 cut(s)	124, 478
BsmFI	GGGAC	3 cut(s)	135, 302, 1325
BsmI	GAATGC	1 cut(s)	964
BsnI	GGCC	2 cut(s)	55, 1019
BsoBI	CYCGRG	2 cut(s)	353, 1669
Bsp1286I	GDGCHC	2 cut(s)	155, 1528
Bsp143I	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
Bsp19I	CCATGG	2 cut(s)	394, 1533
BspACI	CCGC	1 cut(s)	183
BspANI	GGCC	2 cut(s)	55, 1019
BspCNI	CTCAG	1 cut(s)	922
BspDI	ATCGAT	1 cut(s)	539
BspFNI	CGCG	1 cut(s)	751
BspHI	TCATGA	2 cut(s)	1312, 1662
BspLI	GGNNCC	4 cut(s)	510, 724, 1305, 1650
BspMAI	CTGCAG	1 cut(s)	1012
BspPI	GGATC	4 cut(s)	704, 1222, 1368, 1457
BspQI	GCTCTTC	1 cut(s)	1470
BspT107I	GGYRCC	2 cut(s)	722, 1303
BsrDI	GCAATG	3 cut(s)	502, 1020, 1326
BsrFI	RCCGGY	1 cut(s)	89
BsrI	ACTGG	2 cut(s)	1555, 1605
BssAI	RCCGGY	1 cut(s)	89
BssECI	CCNNGG	4 cut(s)	394, 455, 1533, 1669
BssMI	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
BssNI	GRCGYC	3 cut(s)	77, 124, 1304
BssT1I	CCWWGG	3 cut(s)	394, 455, 1533
Bst2UI	CCWGG	4 cut(s)	648, 714, 720, 1308
Bst4CI	ACNGT	8 cut(s)	103, 265, 413, 997, 1414, 1523, 1530, 1562
Bst6I	CTCTTC	5 cut(s)	593, 678, 1470, 1480, 1622
BstACI	GRCGYC	3 cut(s)	77, 124, 1304
BstBAI	YACGTR	2 cut(s)	854, 1169
BstC8I	GCNNGC	1 cut(s)	1291
BstDEI	CTNAG	2 cut(s)	321, 930
BstDSI	CCRYGG	2 cut(s)	394, 1533
BstENI	CCTNNNNNAGG	1 cut(s)	1070
BstF5I	GGATG	3 cut(s)	637, 1009, 1543
BstFNI	CGCG	1 cut(s)	751
BstH2I	RGCGCY	2 cut(s)	1283, 1307
BstHHI	GCGC	2 cut(s)	1282, 1306
BstKTI	GATC	5 cut(s)	543, 712, 1217, 1376, 1465
BstMAI	GTCTC	2 cut(s)	124, 478
BstMBI	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
BstMCI	CGRYCG	1 cut(s)	543
BstMWI	GCNNNNNNNGC	7 cut(s)	150, 176, 182, 854, 1016, 1286, 1295
BstNI	CCWGG	4 cut(s)	648, 714, 720, 1308
BstNSI	RCATGY	5 cut(s)	589, 620, 742, 1452, 1548
BstSCI	CCNGG	6 cut(s)	646, 712, 718, 1306, 1668, 1669
BstSFI	CTRYAG	2 cut(s)	993, 1008
BstSLI	GKGCMC	1 cut(s)	1528
BstUI	CGCG	1 cut(s)	751
BstV1I	GCAGC	3 cut(s)	163, 856, 994
BstV2I	GAAGAC	1 cut(s)	848
BstX2I	RGATCY	1 cut(s)	1373
BstXI	CCANNNNNNTGG	1 cut(s)	144
BstYI	RGATCY	1 cut(s)	1373
Bsu15I	ATCGAT	1 cut(s)	539
Bsu36I	CCTNAGG	1 cut(s)	321
BsuI	GTATCC	1 cut(s)	869
BsuRI	GGCC	2 cut(s)	55, 1019
BsuTUI	ATCGAT	1 cut(s)	539
BtgI	CCRYGG	2 cut(s)	394, 1533
BtrI	CACGTC	2 cut(s)	97, 1015
BtsCI	GGATG	3 cut(s)	637, 1009, 1543
BtsI	GCAGTG	2 cut(s)	1477, 1613
BtsIMutI	CAGTG	7 cut(s)	232, 282, 975, 1477, 1526, 1528, 1613
Cac8I	GCNNGC	1 cut(s)	1291
CaiI	CAGNNNCTG	1 cut(s)	719
CciI	TCATGA	2 cut(s)	1312, 1662
CfoI	GCGC	2 cut(s)	1282, 1306
Cfr10I	RCCGGY	1 cut(s)	89
Cfr13I	GGNCC	3 cut(s)	459, 716, 1648
Cfr9I	CCCGGG	1 cut(s)	1669
ClaI	ATCGAT	1 cut(s)	539
CseI	GACGC	3 cut(s)	85, 132, 1186
CsiI	ACCWGGT	1 cut(s)	718
Csp6I	GTAC	6 cut(s)	104, 388, 518, 912, 1410, 1548
CspAI	ACCGGT	1 cut(s)	89
CviQI	GTAC	6 cut(s)	104, 388, 518, 912, 1410, 1548
DdeI	CTNAG	2 cut(s)	321, 930
DinI	GGCGCC	1 cut(s)	1305
DpnI	GATC	5 cut(s)	542, 711, 1216, 1375, 1464
DpnII	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
DrdI	GACNNNNNNGTC	1 cut(s)	82
DseDI	GACNNNNNNGTC	1 cut(s)	82
EaeI	YGGCCR	1 cut(s)	1017
Eam1104I	CTCTTC	5 cut(s)	593, 678, 1470, 1480, 1622
EarI	CTCTTC	5 cut(s)	593, 678, 1470, 1480, 1622
EciI	GGCGGA	1 cut(s)	172
Ecl136II	GAGCTC	1 cut(s)	153
Eco130I	CCWWGG	3 cut(s)	394, 455, 1533
Eco24I	GRGCYC	1 cut(s)	155
Eco32I	GATATC	1 cut(s)	1660
Eco47I	GGWCC	3 cut(s)	459, 716, 1648
Eco53kI	GAGCTC	1 cut(s)	153
Eco57I	CTGAAG	4 cut(s)	306, 932, 1140, 1263
Eco72I	CACGTG	2 cut(s)	854, 1169
Eco81I	CCTNAGG	1 cut(s)	321
Eco88I	CYCGRG	2 cut(s)	353, 1669
EcoICRI	GAGCTC	1 cut(s)	153
EcoNI	CCTNNNNNAGG	1 cut(s)	1070
EcoO109I	RGGNCCY	1 cut(s)	716
EcoRII	CCWGG	4 cut(s)	646, 712, 718, 1306
EcoRV	GATATC	1 cut(s)	1660
EcoT14I	CCWWGG	3 cut(s)	394, 455, 1533
EcoT22I	ATGCAT	1 cut(s)	1396
EcoT38I	GRGCYC	1 cut(s)	155
EgeI	GGCGCC	1 cut(s)	1305
EheI	GGCGCC	1 cut(s)	1305
ErhI	CCWWGG	3 cut(s)	394, 455, 1533
FaqI	GGGAC	3 cut(s)	135, 302, 1325
FauNDI	CATATG	1 cut(s)	523
Fnu4HI	GCNGC	3 cut(s)	177, 870, 1008
FokI	GGATG	3 cut(s)	644, 1016, 1550
FriOI	GRGCYC	1 cut(s)	155
Fsp4HI	GCNGC	3 cut(s)	177, 870, 1008
FspBI	CTAG	1 cut(s)	456
GlaI	GCGC	2 cut(s)	1281, 1305
GluI	GCNGC	3 cut(s)	177, 870, 1008
GsuI	CTGGAG	3 cut(s)	683, 1572, 1610
HaeII	RGCGCY	2 cut(s)	1283, 1307
HaeIII	GGCC	2 cut(s)	55, 1019
HapII	CCGG	6 cut(s)	52, 90, 113, 127, 1428, 1670
HgaI	GACGC	3 cut(s)	85, 132, 1186
HhaI	GCGC	2 cut(s)	1282, 1306
Hin1I	GRCGYC	3 cut(s)	77, 124, 1304
Hin6I	GCGC	2 cut(s)	1280, 1304
HinP1I	GCGC	2 cut(s)	1280, 1304
HincII	GTYRAC	2 cut(s)	87, 430
HindII	GTYRAC	2 cut(s)	87, 430
HinfI	GANTC	8 cut(s)	205, 214, 230, 248, 481, 886, 921, 1632
HpaII	CCGG	6 cut(s)	52, 90, 113, 127, 1428, 1670
HphI	GGTGA	4 cut(s)	104, 127, 616, 1343
Hpy166II	GTNNAC	5 cut(s)	87, 430, 1410, 1519, 1526
Hpy188I	TCNGA	6 cut(s)	463, 944, 951, 1085, 1134, 1219
Hpy8I	GTNNAC	5 cut(s)	87, 430, 1410, 1519, 1526
Hpy99I	CGWCG	1 cut(s)	79
HpyAV	CCTTC	3 cut(s)	112, 228, 1588
HpyCH4III	ACNGT	8 cut(s)	103, 265, 413, 997, 1414, 1523, 1530, 1562
HpyCH4IV	ACGT	5 cut(s)	96, 853, 1014, 1168, 1643
HpyCH4V	TGCA	8 cut(s)	495, 579, 984, 1010, 1358, 1394, 1526, 1618
HpyF10VI	GCNNNNNNNGC	7 cut(s)	150, 176, 182, 854, 1016, 1286, 1295
HpyF3I	CTNAG	2 cut(s)	321, 930
HpySE526I	ACGT	5 cut(s)	96, 853, 1014, 1168, 1643
Hsp92I	GRCGYC	3 cut(s)	77, 124, 1304
HspAI	GCGC	2 cut(s)	1280, 1304
KasI	GGCGCC	1 cut(s)	1303
Kzo9I	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
LguI	GCTCTTC	1 cut(s)	1470
LmnI	GCTCC	5 cut(s)	72, 325, 565, 664, 1129
Lsp1109I	GCAGC	3 cut(s)	163, 856, 994
LweI	GCATC	3 cut(s)	994, 1381, 1403
MabI	ACCWGGT	1 cut(s)	718
MaeI	CTAG	1 cut(s)	456
MaeII	ACGT	5 cut(s)	96, 853, 1014, 1168, 1643
MaeIII	GTNAC	3 cut(s)	92, 97, 791
MalI	GATC	5 cut(s)	542, 711, 1216, 1375, 1464
MboI	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
MfeI	CAATTG	1 cut(s)	338
MflI	RGATCY	1 cut(s)	1373
MhlI	GDGCHC	2 cut(s)	155, 1528
MlsI	TGGCCA	1 cut(s)	1019
MluCI	AATT	9 cut(s)	17, 338, 651, 897, 985, 1111, 1182, 1194, 1680
MluI	ACGCGT	1 cut(s)	749
MluNI	TGGCCA	1 cut(s)	1019
Mly113I	GGCGCC	1 cut(s)	1304
MlyI	GAGTC	2 cut(s)	880, 930
MmeI	TCCRAC	5 cut(s)	161, 967, 1151, 1546, 1626
Mox20I	TGGCCA	1 cut(s)	1019
Mph1103I	ATGCAT	1 cut(s)	1396
MscI	TGGCCA	1 cut(s)	1019
MseI	TTAA	7 cut(s)	297, 486, 593, 669, 999, 1092, 1679
MslI	CAYNNNNRTG	2 cut(s)	584, 1031
Msp20I	TGGCCA	1 cut(s)	1019
MspI	CCGG	6 cut(s)	52, 90, 113, 127, 1428, 1670
MspR9I	CCNGG	6 cut(s)	648, 714, 720, 1308, 1670, 1671
MunI	CAATTG	1 cut(s)	338
Mva1269I	GAATGC	1 cut(s)	964
MvaI	CCWGG	4 cut(s)	648, 714, 720, 1308
MvnI	CGCG	1 cut(s)	751
MwoI	GCNNNNNNNGC	7 cut(s)	150, 176, 182, 854, 1016, 1286, 1295
NarI	GGCGCC	1 cut(s)	1304
NciI	CCSGG	2 cut(s)	1670, 1671
NcoI	CCATGG	2 cut(s)	394, 1533
NdeI	CATATG	1 cut(s)	523
NdeII	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
NlaIV	GGNNCC	4 cut(s)	510, 724, 1305, 1650
NmuCI	GTSAC	3 cut(s)	92, 97, 791
NsiI	ATGCAT	1 cut(s)	1396
NspI	RCATGY	5 cut(s)	589, 620, 742, 1452, 1548
PaeR7I	CTCGAG	1 cut(s)	353
PagI	TCATGA	2 cut(s)	1312, 1662
PciI	ACATGT	4 cut(s)	585, 616, 1448, 1544
PciSI	GCTCTTC	1 cut(s)	1470
PctI	GAATGC	1 cut(s)	964
PfeI	GAWTC	6 cut(s)	205, 214, 230, 248, 481, 1632
PflMI	CCANNNNNTGG	3 cut(s)	527, 719, 1513
PfoI	TCCNGGA	1 cut(s)	712
PinAI	ACCGGT	1 cut(s)	89
PkrI	GCNGC	3 cut(s)	178, 871, 1009
Ple19I	CGATCG	1 cut(s)	543
PleI	GAGTC	2 cut(s)	880, 929
PluTI	GGCGCC	1 cut(s)	1307
PmaCI	CACGTG	2 cut(s)	854, 1169
PmlI	CACGTG	2 cut(s)	854, 1169
PpsI	GAGTC	2 cut(s)	880, 929
Ppu21I	YACGTR	2 cut(s)	854, 1169
PpuMI	RGGWCCY	1 cut(s)	716
PscI	ACATGT	4 cut(s)	585, 616, 1448, 1544
PshBI	ATTAAT	2 cut(s)	593, 1092
PsiI	TTATAA	1 cut(s)	803
Psp124BI	GAGCTC	1 cut(s)	155
Psp1406I	AACGTT	1 cut(s)	1643
Psp5II	RGGWCCY	1 cut(s)	716
Psp6I	CCWGG	4 cut(s)	646, 712, 718, 1306
PspCI	CACGTG	2 cut(s)	854, 1169
PspGI	CCWGG	4 cut(s)	646, 712, 718, 1306
PspN4I	GGNNCC	4 cut(s)	510, 724, 1305, 1650
PspPI	GGNCC	3 cut(s)	459, 716, 1648
PspPPI	RGGWCCY	1 cut(s)	716
PspXI	VCTCGAGB	1 cut(s)	353
PstI	CTGCAG	1 cut(s)	1012
PstNI	CAGNNNCTG	1 cut(s)	719
PsuI	RGATCY	1 cut(s)	1373
PvuI	CGATCG	1 cut(s)	543
RsaI	GTAC	6 cut(s)	105, 389, 519, 913, 1411, 1549
RsaNI	GTAC	6 cut(s)	104, 388, 518, 912, 1410, 1548
RseI	CAYNNNNRTG	2 cut(s)	584, 1031
SacI	GAGCTC	1 cut(s)	155
SapI	GCTCTTC	1 cut(s)	1470
SaqAI	TTAA	7 cut(s)	297, 486, 593, 669, 999, 1092, 1679
SatI	GCNGC	3 cut(s)	177, 870, 1008
Sau3AI	GATC	5 cut(s)	540, 709, 1214, 1373, 1462
Sau96I	GGNCC	3 cut(s)	459, 716, 1648
SchI	GAGTC	2 cut(s)	880, 930
ScrFI	CCNGG	6 cut(s)	648, 714, 720, 1308, 1670, 1671
SduI	GDGCHC	2 cut(s)	155, 1528
SexAI	ACCWGGT	1 cut(s)	718
SfaNI	GCATC	3 cut(s)	994, 1381, 1403
SfcI	CTRYAG	2 cut(s)	993, 1008
SfoI	GGCGCC	1 cut(s)	1305
Sfr274I	CTCGAG	1 cut(s)	353
SinI	GGWCC	3 cut(s)	459, 716, 1648
SlaI	CTCGAG	1 cut(s)	353
SmaI	CCCGGG	1 cut(s)	1671
SmiMI	CAYNNNNRTG	2 cut(s)	584, 1031
SmlI	CTYRAG	2 cut(s)	353, 809
SmoI	CTYRAG	2 cut(s)	353, 809
Sse9I	AATT	9 cut(s)	17, 338, 651, 897, 985, 1111, 1182, 1194, 1680
SsiI	CCGC	1 cut(s)	183
SspDI	GGCGCC	1 cut(s)	1303
SspI	AATATT	1 cut(s)	677
SspMI	CTAG	1 cut(s)	456
SstI	GAGCTC	1 cut(s)	155
StyD4I	CCNGG	6 cut(s)	646, 712, 718, 1306, 1668, 1669
StyI	CCWWGG	3 cut(s)	394, 455, 1533
TaaI	ACNGT	8 cut(s)	103, 265, 413, 997, 1414, 1523, 1530, 1562
TaiI	ACGT	5 cut(s)	99, 856, 1017, 1171, 1646
TaqI	TCGA	7 cut(s)	74, 149, 212, 354, 539, 543, 1140
TasI	AATT	9 cut(s)	17, 338, 651, 897, 985, 1111, 1182, 1194, 1680
TatI	WGTACW	1 cut(s)	1547
TfiI	GAWTC	6 cut(s)	205, 214, 230, 248, 481, 1632
Tru1I	TTAA	7 cut(s)	297, 486, 593, 669, 999, 1092, 1679
Tru9I	TTAA	7 cut(s)	297, 486, 593, 669, 999, 1092, 1679
TscAI	CASTG	7 cut(s)	232, 289, 975, 1477, 1528, 1533, 1620
TseFI	GTSAC	3 cut(s)	92, 97, 791
TseI	GCWGC	3 cut(s)	176, 869, 1007
Tsp45I	GTSAC	3 cut(s)	92, 97, 791
TspDTI	ATGAA	7 cut(s)	513, 611, 687, 1329, 1595, 1640, 1679
TspMI	CCCGGG	1 cut(s)	1669
TspRI	CASTG	7 cut(s)	232, 289, 975, 1477, 1528, 1533, 1620
Van91I	CCANNNNNTGG	3 cut(s)	527, 719, 1513
VneI	GTGCAC	1 cut(s)	1524
VpaK11BI	GGWCC	3 cut(s)	459, 716, 1648
VspI	ATTAAT	2 cut(s)	593, 1092
XagI	CCTNNNNNAGG	1 cut(s)	1070
XapI	RAATTY	2 cut(s)	17, 1111
XceI	RCATGY	5 cut(s)	589, 620, 742, 1452, 1548
XhoI	CTCGAG	1 cut(s)	353
XmaI	CCCGGG	1 cut(s)	1669
XmaJI	CCTAGG	1 cut(s)	455
XspI	CTAG	1 cut(s)	456
Zsp2I	ATGCAT	1 cut(s)	1396

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.