Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0003659

Physical Location & Seq

Genomic Coordinates Reverse (-)

22907799 .. 22916204

Gene Structure 8406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG239200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGCCATGTCTTCCTGGTTCTCTCGCTTACGCCATTCCTCAAAGTCCTTGTTCAACTCTACTCCGCCTCTCCTCCGATCCTCCTTCTCCACCAAGCTCATCACAACTCCAACACCAACAGCAAACTCCGGCAGCTCAACACACCCATTTCCGTTTTGGTCTCTTCCAATCGCTGTAGCTGCTGGATCACTCGCCCTCTATCCCCAATCAAACCCCTCACTCTGCCAAGCTCCCAATGCCAATGCTCGCACCGAGTTTGTGGTCAAAGGCTCACACAAGGATGTCCCACAAGAACTTATCAATGAATTGAAGGCTGTTTGTAAGGATAACATGACAGTGGATTATGAGGAGAGGTATAACCATGGTAAACCACAAAACAGCTTTCACAAAGCTGTCAACATTCCTGACCTGGTTGTTTTCGCGCGGTCTGAAGAGGAAGTTTGTAAGATAGTCAAGCTATGTGACAAACACAAGGTCCCCATTGTGCCATATGGTGGAGCGACATCAATCGAGGGTCACACCTTGTCTCCCCATGGAGGTGTTTGCATTGACATGTCATCAATGAAGAATGTCAAAGCTTTACATGTTGAGGACATGGATGTCATTGTTGAACCTGGCATTGGATGGATGGAGCTTAATGAATACTTGGAGCCTTATGGTTTATTCTTTCCCCTGGATCCAGGACCTGGTGCAACAATTGGAGGAATGTGTGCTACACGTTGCTCTGGTTCGTTAGCTGTTAGGTATGGAACCATGCGTGATAATGTCATCAGTCTCAAGGCAGTTCTTGCAAATGGAGAGGTGGTGAAGACTGCATCTCGTGCTCGTAAGAGTGCAGCAGGGTATGATTTGACACGCCTGATGATTGGAAGTGAAGGAACTCTTGGTGTAATTACTGAAGTAACTCTACGACTGCAGAAAATTCCCCAATATTCAGTGGTTGCTATGTGTAATTTCCCATCAGTTAAGGATGCGGCAGATGTTGCTATTGCCACTATGCTGTCTGGAATACAAGTGTCAAGGGTTGAGCTACTGGATGAAGTTCAAGTGAGGGCTATCAATATTGCTAATGGGAAGAATTTGCCAGAAACACCAACTTTGATGTTTGAGTTTATAGGCACAGAGGCCTATTCACGTGAACAAACCCAAATAGTTCAGAAGATTGTGTCTGAACACAATGGCTCAGACTTTGTTTTTGCAGAAGACCCTGATACTAAAAAGGAACTCTGGAAGATAAGGAAGGAAGCACTCTGGGCATGCTTTGCAATGGAACCTGATTTTGAGGCGATGATTTCGGATGTTTGTGTACCTCTATCATGCCTTGCAGAATTGATATCAAGGTCCAAGCAAGAATTGGATGCGTCAGAACTGGTTTGCACAGTTATTGCTCATGCTGGTGATGGGAACTTCCACACAGTGATTCTTTTCGATCCTAACAAAGAAGAACATCGACGAGAAGCAGAGAGATTGAACCATTTTATGGTTCATACTGCCTTGTCAATGGAAGGAACATGTACCGGGGAACATGGTGTTGGCACAGGAAAAATGAAGTATCTTGAAAAAGAATTAGGATTAGAGGCTTTGAAGACCATGAAAAGAATAAAAGTAGCATTGGATCCCAACAACATCATGAATCCAGGAAAGCTTATTCCTTCTCATGTTTGTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003973 GO:0004457 GO:0004458 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006081 GO:0008144 GO:0008150 GO:0008152 GO:0008720 GO:0008891 GO:0009056 GO:0009438 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0016898 GO:0016899 GO:0017076 GO:0019154 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042180 GO:0042182 GO:0042802 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046185 GO:0048037 GO:0050660 GO:0050662 GO:0051596 GO:0055114 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

FAD-oxidase_C FAD_binding_4

Protein Analysis

556

Amino Acids

61.0

Weight (kDa)

6.12

Isoelectric Point (pI)

36.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_binding_4	PF01565	135 - 271	3e-37	FAD binding domain
FAD-oxidase_C	PF02913	308 - 549	5.6e-71	FAD linked oxidases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06580
fragaria_vesca	FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120
malus_domestica	MD12G1046600.v1.1 MD12G1046700.v1.1 MD14G1045600.v1.1
prunus_persica	Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1
pyrus_communis	pycom12g04020 pycom12g04030
rosa_chinensis	RchiOBHm_Chr3g0477531
rosa_laevigata	RLG00000023711
rosa_multiflora	Rmu_co8386717.1_g000001 Rmu_sc0000775.1_g000016
rosa_roxburghii	Rroxscaffold_6G00403860 Rroxscaffold_6G00403870 Rroxscaffold_6G00404560
rosa_rugosa	Rorug03G0161800
rosa_samantha	Rh3AG211800 Rh3BG245600 Rh3CG239200 Rh3DG238700
rosa_wichuraiana	Rw3G019190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	599
AccB7I	CCANNNNNTGG	3 cut(s)	494, 686, 1480
AccII	CGCG	2 cut(s)	422, 424
AciI	CCGC	3 cut(s)	65, 424, 974
AclWI	GGATC	7 cut(s)	72, 193, 671, 684, 1424, 1610, 1623
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	921, 1078
AcuI	CTGAAG	2 cut(s)	450, 918
AcvI	CACGTG	1 cut(s)	1136
AdeI	CACNNNGTG	1 cut(s)	1417
AfaI	GTAC	2 cut(s)	1308, 1516
AfiI	CCNNNNNNNGG	5 cut(s)	494, 536, 620, 686, 1480
AflIII	ACRYGT	4 cut(s)	552, 583, 716, 1511
AgsI	TTSAA	7 cut(s)	55, 310, 611, 1046, 1471, 1559, 1585
AjnI	CCWGG	7 cut(s)	14, 408, 613, 672, 679, 685, 1636
AjuI	GAANNNNNNNTTGG	6 cut(s)	603, 635, 867, 899, 1515, 1547
Alw21I	GWGCWC	1 cut(s)	826
Alw26I	GTCTC	3 cut(s)	165, 531, 779
AlwI	GGATC	7 cut(s)	72, 193, 671, 684, 1424, 1610, 1623
AlwNI	CAGNNNCTG	1 cut(s)	686
AoxI	GGCC	2 cut(s)	3, 1125
ApeKI	GCWGC	3 cut(s)	132, 179, 836
ApoI	RAATTY	2 cut(s)	921, 1078
ArsI	GACNNNNNNTTYG	4 cut(s)	459, 491, 1178, 1210
AspLEI	GCGC	1 cut(s)	424
AspS9I	GGNCC	3 cut(s)	475, 683, 1341
AsuC2I	CCSGG	1 cut(s)	1519
AsuHPI	GGTGA	2 cut(s)	817, 1409
AvaII	GGWCC	3 cut(s)	475, 683, 1341
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	2 cut(s)	676, 1615
BarI	GAAGNNNNNNTAC	2 cut(s)	891, 923
BauI	CACGAG	1 cut(s)	819
BbrPI	CACGTG	1 cut(s)	1136
BbsI	GAAGAC	4 cut(s)	3, 815, 1209, 1592
Bbv12I	GWGCWC	1 cut(s)	826
BbvI	GCAGC	3 cut(s)	144, 166, 848
BccI	CCATC	4 cut(s)	618, 622, 967, 1394
BciT130I	CCWGG	7 cut(s)	16, 410, 615, 674, 681, 687, 1638
BcnI	CCSGG	1 cut(s)	1519
BcoDI	GTCTC	3 cut(s)	165, 531, 779
BfmI	CTRYAG	2 cut(s)	174, 914
BisI	GCNGC	4 cut(s)	133, 180, 837, 975
BlsI	GCNGC	4 cut(s)	134, 181, 838, 976
Bme1390I	CCNGG	8 cut(s)	16, 410, 615, 674, 681, 687, 1519, 1638
Bme18I	GGWCC	3 cut(s)	475, 683, 1341
BmgT120I	GGNCC	3 cut(s)	475, 683, 1341
BmiI	GGNNCC	6 cut(s)	477, 651, 678, 751, 1272, 1617
BmrFI	CCNGG	8 cut(s)	16, 410, 615, 674, 681, 687, 1519, 1638
BmsI	GCATC	3 cut(s)	824, 961, 1348
BpiI	GAAGAC	4 cut(s)	3, 815, 1209, 1592
BpuEI	CTTGAG	1 cut(s)	761
BpuMI	CCSGG	1 cut(s)	1519
BsaAI	YACGTR	1 cut(s)	1136
BsaI	GGTCTC	1 cut(s)	165
BsaJI	CCNNGG	4 cut(s)	361, 532, 672, 1518
BsaXI	ACNNNNNCTCC	4 cut(s)	511, 541, 789, 819
Bsc4I	CCNNNNNNNGG	5 cut(s)	494, 536, 620, 686, 1480
Bse1I	ACTGG	2 cut(s)	1038, 1374
Bse3DI	GCAATG	1 cut(s)	1272
BseBI	CCWGG	7 cut(s)	16, 410, 615, 674, 681, 687, 1638
BseDI	CCNNGG	4 cut(s)	361, 532, 672, 1518
BseGI	GGATG	8 cut(s)	286, 604, 629, 633, 976, 1042, 1303, 1363
BseLI	CCNNNNNNNGG	5 cut(s)	494, 536, 620, 686, 1480
BseMI	GCAATG	1 cut(s)	1272
BseMII	CTCAG	1 cut(s)	1197
BseNI	ACTGG	2 cut(s)	1038, 1374
BseRI	GAGGAG	2 cut(s)	62, 362
BseXI	GCAGC	3 cut(s)	144, 166, 848
BsgI	GTGCAG	1 cut(s)	855
Bsh1236I	CGCG	2 cut(s)	422, 424
BshFI	GGCC	2 cut(s)	5, 1127
BsiHKAI	GWGCWC	1 cut(s)	826
BsiSI	CCGG	2 cut(s)	129, 1518
BslFI	GGGAC	2 cut(s)	269, 461
BslI	CCNNNNNNNGG	5 cut(s)	494, 536, 620, 686, 1480
BsmAI	GTCTC	3 cut(s)	165, 531, 779
BsmFI	GGGAC	2 cut(s)	269, 461
BsnI	GGCC	2 cut(s)	5, 1127
Bso31I	GGTCTC	1 cut(s)	165
Bsp1286I	GDGCHC	1 cut(s)	826
Bsp143I	GATC	5 cut(s)	77, 185, 676, 1429, 1615
Bsp19I	CCATGG	2 cut(s)	361, 532
BspACI	CCGC	3 cut(s)	65, 424, 974
BspANI	GGCC	2 cut(s)	5, 1127
BspCNI	CTCAG	1 cut(s)	1196
BspFNI	CGCG	2 cut(s)	422, 424
BspHI	TCATGA	1 cut(s)	1629
BspLI	GGNNCC	6 cut(s)	477, 651, 678, 751, 1272, 1617
BspMAI	CTGCAG	1 cut(s)	918
BspPI	GGATC	7 cut(s)	72, 193, 671, 684, 1424, 1610, 1623
BspTNI	GGTCTC	1 cut(s)	165
BsrDI	GCAATG	1 cut(s)	1272
BsrI	ACTGG	2 cut(s)	1038, 1374
BssECI	CCNNGG	4 cut(s)	361, 532, 672, 1518
BssMI	GATC	5 cut(s)	77, 185, 676, 1429, 1615
BssSI	CACGAG	1 cut(s)	819
BssT1I	CCWWGG	2 cut(s)	361, 532
Bst2BI	CACGAG	1 cut(s)	819
Bst2UI	CCWGG	7 cut(s)	16, 410, 615, 674, 681, 687, 1638
Bst4CI	ACNGT	3 cut(s)	337, 1381, 1417
Bst6I	CTCTTC	2 cut(s)	168, 426
BstAPI	GCANNNNNTGC	4 cut(s)	788, 821, 983, 1262
BstBAI	YACGTR	1 cut(s)	1136
BstC8I	GCNNGC	2 cut(s)	247, 1258
BstDEI	CTNAG	1 cut(s)	1183
BstDSI	CCRYGG	2 cut(s)	361, 532
BstF5I	GGATG	8 cut(s)	286, 604, 629, 633, 976, 1042, 1303, 1363
BstFNI	CGCG	2 cut(s)	422, 424
BstHHI	GCGC	1 cut(s)	424
BstKTI	GATC	5 cut(s)	80, 188, 679, 1432, 1618
BstMAI	GTCTC	3 cut(s)	165, 531, 779
BstMBI	GATC	5 cut(s)	77, 185, 676, 1429, 1615
BstMWI	GCNNNNNNNGC	7 cut(s)	179, 236, 788, 821, 983, 1253, 1262
BstNI	CCWGG	7 cut(s)	16, 410, 615, 674, 681, 687, 1638
BstNSI	RCATGY	4 cut(s)	556, 587, 1260, 1515
BstSCI	CCNGG	8 cut(s)	14, 408, 613, 672, 679, 685, 1517, 1636
BstSFI	CTRYAG	2 cut(s)	174, 914
BstUI	CGCG	2 cut(s)	422, 424
BstV1I	GCAGC	3 cut(s)	144, 166, 848
BstV2I	GAAGAC	4 cut(s)	3, 815, 1209, 1592
BstX2I	RGATCY	2 cut(s)	676, 1615
BstYI	RGATCY	2 cut(s)	676, 1615
BsuRI	GGCC	2 cut(s)	5, 1127
BtgI	CCRYGG	2 cut(s)	361, 532
BtgZI	GCGATG	1 cut(s)	1301
BtsCI	GGATG	8 cut(s)	286, 604, 629, 633, 976, 1042, 1303, 1363
BtsIMutI	CAGTG	3 cut(s)	342, 942, 1422
Cac8I	GCNNGC	2 cut(s)	247, 1258
CaiI	CAGNNNCTG	1 cut(s)	686
CciI	TCATGA	1 cut(s)	1629
CfoI	GCGC	1 cut(s)	424
Cfr13I	GGNCC	3 cut(s)	475, 683, 1341
CseI	GACGC	1 cut(s)	1350
CsiI	ACCWGGT	2 cut(s)	408, 685
Csp6I	GTAC	2 cut(s)	1307, 1515
CviQI	GTAC	2 cut(s)	1307, 1515
DdeI	CTNAG	1 cut(s)	1183
DpnI	GATC	5 cut(s)	79, 187, 678, 1431, 1617
DpnII	GATC	5 cut(s)	77, 185, 676, 1429, 1615
DraIII	CACNNNGTG	1 cut(s)	1417
DrdI	GACNNNNNNGTC	1 cut(s)	599
DseDI	GACNNNNNNGTC	1 cut(s)	599
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	168, 426
EarI	CTCTTC	2 cut(s)	168, 426
EciI	GGCGGA	1 cut(s)	54
Eco130I	CCWWGG	2 cut(s)	361, 532
Eco147I	AGGCCT	1 cut(s)	1127
Eco31I	GGTCTC	1 cut(s)	165
Eco32I	GATATC	1 cut(s)	1335
Eco47I	GGWCC	3 cut(s)	475, 683, 1341
Eco57I	CTGAAG	2 cut(s)	450, 918
Eco72I	CACGTG	1 cut(s)	1136
EcoO109I	RGGNCCY	2 cut(s)	475, 683
EcoRII	CCWGG	7 cut(s)	14, 408, 613, 672, 679, 685, 1636
EcoRV	GATATC	1 cut(s)	1335
EcoT14I	CCWWGG	2 cut(s)	361, 532
ErhI	CCWWGG	2 cut(s)	361, 532
FalI	AAGNNNNNCTT	2 cut(s)	867, 899
FaqI	GGGAC	2 cut(s)	269, 461
FauNDI	CATATG	1 cut(s)	490
Fnu4HI	GCNGC	4 cut(s)	133, 180, 837, 975
FokI	GGATG	8 cut(s)	293, 611, 636, 640, 983, 1049, 1310, 1370
Fsp4HI	GCNGC	4 cut(s)	133, 180, 837, 975
GlaI	GCGC	1 cut(s)	423
GluI	GCNGC	4 cut(s)	133, 180, 837, 975
HaeIII	GGCC	2 cut(s)	5, 1127
HapII	CCGG	2 cut(s)	129, 1518
HgaI	GACGC	1 cut(s)	1350
HhaI	GCGC	1 cut(s)	424
Hin6I	GCGC	1 cut(s)	422
HinP1I	GCGC	1 cut(s)	422
HincII	GTYRAC	1 cut(s)	397
HindII	GTYRAC	1 cut(s)	397
HindIII	AAGCTT	2 cut(s)	576, 1643
HinfI	GANTC	2 cut(s)	1420, 1633
HpaII	CCGG	2 cut(s)	129, 1518
HphI	GGTGA	2 cut(s)	817, 1409
Hpy166II	GTNNAC	4 cut(s)	368, 397, 1139, 1307
Hpy188I	TCNGA	7 cut(s)	77, 430, 1158, 1171, 1186, 1297, 1366
Hpy188III	TCNNGA	5 cut(s)	404, 1005, 1228, 1556, 1630
Hpy8I	GTNNAC	4 cut(s)	368, 397, 1139, 1307
Hpy99I	CGWCG	1 cut(s)	1455
HpyAV	CCTTC	6 cut(s)	94, 304, 869, 1234, 1499, 1662
HpyCH4III	ACNGT	3 cut(s)	337, 1381, 1417
HpyCH4IV	ACGT	2 cut(s)	718, 1135
HpyF10VI	GCNNNNNNNGC	7 cut(s)	179, 236, 788, 821, 983, 1253, 1262
HpyF3I	CTNAG	1 cut(s)	1183
HpySE526I	ACGT	2 cut(s)	718, 1135
HspAI	GCGC	1 cut(s)	422
Kzo9I	GATC	5 cut(s)	77, 185, 676, 1429, 1615
LmnI	GCTCC	4 cut(s)	235, 497, 631, 649
Lsp1109I	GCAGC	3 cut(s)	144, 166, 848
LweI	GCATC	3 cut(s)	824, 961, 1348
MabI	ACCWGGT	2 cut(s)	408, 685
MaeII	ACGT	2 cut(s)	718, 1135
MaeIII	GTNAC	3 cut(s)	461, 515, 901
MalI	GATC	5 cut(s)	79, 187, 678, 1431, 1617
MboI	GATC	5 cut(s)	77, 185, 676, 1429, 1615
MfeI	CAATTG	1 cut(s)	696
MflI	RGATCY	2 cut(s)	676, 1615
MhlI	GDGCHC	1 cut(s)	826
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	9 cut(s)	305, 696, 891, 921, 952, 1078, 1328, 1352, 1565
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	134
Mox20I	TGGCCA	1 cut(s)	5
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	2 cut(s)	636, 966
MslI	CAYNNNNRTG	5 cut(s)	279, 335, 537, 551, 1395
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	129, 1518
MspR9I	CCNGG	8 cut(s)	16, 410, 615, 674, 681, 687, 1519, 1638
MunI	CAATTG	1 cut(s)	696
MvaI	CCWGG	7 cut(s)	16, 410, 615, 674, 681, 687, 1638
MvnI	CGCG	2 cut(s)	422, 424
MwoI	GCNNNNNNNGC	7 cut(s)	179, 236, 788, 821, 983, 1253, 1262
NciI	CCSGG	1 cut(s)	1519
NcoI	CCATGG	2 cut(s)	361, 532
NdeI	CATATG	1 cut(s)	490
NdeII	GATC	5 cut(s)	77, 185, 676, 1429, 1615
NlaIV	GGNNCC	6 cut(s)	477, 651, 678, 751, 1272, 1617
NmuCI	GTSAC	2 cut(s)	461, 515
NspI	RCATGY	4 cut(s)	556, 587, 1260, 1515
PaeI	GCATGC	1 cut(s)	1260
PagI	TCATGA	1 cut(s)	1629
PceI	AGGCCT	1 cut(s)	1127
PciI	ACATGT	3 cut(s)	552, 583, 1511
PfeI	GAWTC	2 cut(s)	1420, 1633
PflMI	CCANNNNNTGG	3 cut(s)	494, 686, 1480
PfoI	TCCNGGA	2 cut(s)	679, 1636
PkrI	GCNGC	4 cut(s)	134, 181, 838, 976
PmaCI	CACGTG	1 cut(s)	1136
PmlI	CACGTG	1 cut(s)	1136
Ppu21I	YACGTR	1 cut(s)	1136
PpuMI	RGGWCCY	2 cut(s)	475, 683
PscI	ACATGT	3 cut(s)	552, 583, 1511
Psp5II	RGGWCCY	2 cut(s)	475, 683
Psp6I	CCWGG	7 cut(s)	14, 408, 613, 672, 679, 685, 1636
PspCI	CACGTG	1 cut(s)	1136
PspGI	CCWGG	7 cut(s)	14, 408, 613, 672, 679, 685, 1636
PspN4I	GGNNCC	6 cut(s)	477, 651, 678, 751, 1272, 1617
PspPI	GGNCC	3 cut(s)	475, 683, 1341
PspPPI	RGGWCCY	2 cut(s)	475, 683
PstI	CTGCAG	1 cut(s)	918
PstNI	CAGNNNCTG	1 cut(s)	686
PsuI	RGATCY	2 cut(s)	676, 1615
RsaI	GTAC	2 cut(s)	1308, 1516
RsaNI	GTAC	2 cut(s)	1307, 1515
RseI	CAYNNNNRTG	5 cut(s)	279, 335, 537, 551, 1395
SaqAI	TTAA	2 cut(s)	636, 966
SatI	GCNGC	4 cut(s)	133, 180, 837, 975
Sau3AI	GATC	5 cut(s)	77, 185, 676, 1429, 1615
Sau96I	GGNCC	3 cut(s)	475, 683, 1341
ScrFI	CCNGG	8 cut(s)	16, 410, 615, 674, 681, 687, 1519, 1638
SduI	GDGCHC	1 cut(s)	826
SexAI	ACCWGGT	2 cut(s)	408, 685
SfaNI	GCATC	3 cut(s)	824, 961, 1348
SfcI	CTRYAG	2 cut(s)	174, 914
SinI	GGWCC	3 cut(s)	475, 683, 1341
SmiMI	CAYNNNNRTG	5 cut(s)	279, 335, 537, 551, 1395
SmlI	CTYRAG	1 cut(s)	776
SmoI	CTYRAG	1 cut(s)	776
SphI	GCATGC	1 cut(s)	1260
Sse9I	AATT	9 cut(s)	305, 696, 891, 921, 952, 1078, 1328, 1352, 1565
SseBI	AGGCCT	1 cut(s)	1127
SsiI	CCGC	3 cut(s)	65, 424, 974
SspI	AATATT	2 cut(s)	932, 1063
StuI	AGGCCT	1 cut(s)	1127
StyD4I	CCNGG	8 cut(s)	14, 408, 613, 672, 679, 685, 1517, 1636
StyI	CCWWGG	2 cut(s)	361, 532
TaaI	ACNGT	3 cut(s)	337, 1381, 1417
TaiI	ACGT	2 cut(s)	721, 1138
TaqI	TCGA	3 cut(s)	510, 1428, 1450
TasI	AATT	9 cut(s)	305, 696, 891, 921, 952, 1078, 1328, 1352, 1565
TauI	GCSGC	1 cut(s)	977
TfiI	GAWTC	2 cut(s)	1420, 1633
Tru1I	TTAA	2 cut(s)	636, 966
Tru9I	TTAA	2 cut(s)	636, 966
TscAI	CASTG	3 cut(s)	342, 942, 1422
TseFI	GTSAC	2 cut(s)	461, 515
TseI	GCWGC	3 cut(s)	132, 179, 836
Tsp45I	GTSAC	2 cut(s)	461, 515
TspDTI	ATGAA	8 cut(s)	318, 578, 654, 1053, 1475, 1562, 1607, 1646
TspGWI	ACGGA	1 cut(s)	141
TspRI	CASTG	3 cut(s)	342, 942, 1422
Van91I	CCANNNNNTGG	3 cut(s)	494, 686, 1480
VpaK11BI	GGWCC	3 cut(s)	475, 683, 1341
XapI	RAATTY	2 cut(s)	921, 1078
XceI	RCATGY	4 cut(s)	556, 587, 1260, 1515
XcmI	CCANNNNNNNNNTGG	2 cut(s)	153, 1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.