Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003659

Physical Location & Seq

Genomic Coordinates Reverse (-)

3947047 .. 3955742

Gene Structure 8696 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g04020.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1707 bp

ATGGCCATGGCGTCGTGGTTCTCTCGCCTCCGCCGTTCCTCACAGCGCTTCTTCTTCACCTCCTCCACCCTCCGAACCTCCATGTCCACCAAACTGGCGAGAGCCCAAAATACAACGAACTCCGAGAGCCCGAAAACCCCATTTCTCTTCTGGTCGAGCTCGCTGCTTCCGGTCGCACTCGCAGTCTCAGCTGGATCGCTTGCCCTCCGCCCCCAGTCGGACCCATCACTCTGCTCTCTCTCTATGTTCACACACAGCAACGAGTTTGTGGTTAAAGGGTTGCGCAAGGAAGTCCCACAAGAGCTTATTGATGAATTGAAGGATGATAACATGACAATGGATTATGAGGAGAGGTATAACTATGGAAAACCGCAGAACAGCTTTCACAAAGCGGTTAATATTCCCGACATCGTTGTGTTTCCGAGGTCTGAAGAGCAAGTTTCTAAGATAGTCAAGTCATGCGACAAGCATAAGGTTCCAATTGTACCATATGGCGGAGCTACATCCCTTGAGGGTCACACCTTGTCTCCCAATGGAGGTGTTTGCATTGACATGTCATTAATGAATCATGTTAAAGCATTACATATTGAGGACATGGATGTTGTTGTTGAGCCTGGGATTGGATGGATGGAGCTGAATGAATACCTGGCTCCTTATGGTCTATTTTTTCCCCTCGATCCAGGGCCTGGTGCAACAATTGGAGGAATGTGCGCGACACGTTGCTCTGGTTCCTTAGCTGTTAGGTATGGAACCATGCGTTATAATGTCATAAGTCTCAAGGTAGTTCTTGCAAATGGAGATATTGTTAAGACTGCATCTCGTGCTAGAAAGAGTGCTGCAGGGCATGTTGTGAACATTAAAATTTTTGCACGTCATAGCTATGATTTGACCCGCCTGGTGATTGGAAGTGAAGGAACACTTGGTGTAATAACGGAAGTCACTCTACGCCTTCAGAAAATTCCCCAATACTCAGTGGTTGCTATGTGTAATTTCCCTTCATTTAAGGATGCAGCAGATGTTGCTATTGCTACTATGCTGTCGGGCATTCAGGTTTCACGGGTTGAACTACTGGATGAGGTTCAAGTGAGGGCAATCAACATTGCGAATGGGAAGAATTTTCTTGAAACTCCAACTTTAATATTCGAATTTATAGGCACAGAGGCATATTCCCGTGAGCAAACCCATATAGTTCAACAGATTGTTTCTGAACACAATGGCTCAGACTTTGTTTTTGCGGAAGACCCTGAAGCTAAAAAGGAACTCTGGAAGATAAGGAAGGAGGCACTCTGGGCATGCTTTGCAATGGAGCCTAATTTTGAGGCAATGATTACGGATGTATGTGTTCCTTTATCATCTCTTGCAGAATTGATATCAAGGACCAAAGAACAGCTGGATGCATCAGAACTTGTTTGCACAGTTATTGCTCATGCTGGTAACGGGAACTTCCATACATTTATTCTCTTTGACCCTAACAATGAAGAACATCGACGAGAAGCAGAGAGACTGAACCATTTTATGGTCCATACTGCCTTGTCAATGGAAGGAACATGTACGGGTGAACATGGCGTTGGTACAGGAAAAATCAAGTATCTTGAGCAAGAACTGGGAATGGAGTCTTTGAAGACAATGAAAAGAATAAAAGCAGCATTAGATCCCAACAACACTATGAATCCAGGAAAGCTAATTCCTGCTCATGTTTGTTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003973 GO:0004457 GO:0004458 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006081 GO:0008144 GO:0008150 GO:0008152 GO:0008720 GO:0008891 GO:0009056 GO:0009438 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0016898 GO:0016899 GO:0017076 GO:0019154 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042180 GO:0042182 GO:0042802 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046185 GO:0048037 GO:0050660 GO:0050662 GO:0051596 GO:0055114 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

FAD-oxidase_C FAD_binding_4

Protein Analysis

569

Amino Acids

62.91

Weight (kDa)

6.3

Isoelectric Point (pI)

37.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06580
fragaria_vesca	FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120
malus_domestica	MD12G1046600.v1.1 MD12G1046700.v1.1 MD14G1045600.v1.1
prunus_persica	Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1
pyrus_communis	pycom12g04020 pycom12g04030
rosa_chinensis	RchiOBHm_Chr3g0477531
rosa_laevigata	RLG00000023711
rosa_multiflora	Rmu_co8386717.1_g000001 Rmu_sc0000775.1_g000016
rosa_roxburghii	Rroxscaffold_6G00403860 Rroxscaffold_6G00403870 Rroxscaffold_6G00404560
rosa_rugosa	Rorug03G0161800
rosa_samantha	Rh3AG211800 Rh3BG245600 Rh3CG239200 Rh3DG238700
rosa_wichuraiana	Rw3G019190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	762
Acc16I	TGCGCA	1 cut(s)	284
AccB7I	CCANNNNNTGG	2 cut(s)	686, 1516
AccII	CGCG	1 cut(s)	713
AciI	CCGC	7 cut(s)	31, 208, 371, 392, 495, 892, 1235
AclWI	GGATC	3 cut(s)	202, 671, 1646
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	4 cut(s)	861, 957, 1114, 1145
AcuI	CTGAAG	3 cut(s)	450, 935, 1266
AcyI	GRCGYC	1 cut(s)	11
AdeI	CACNNNGTG	1 cut(s)	923
AfaI	GTAC	3 cut(s)	486, 1552, 1573
AfeI	AGCGCT	1 cut(s)	47
AfiI	CCNNNNNNNGG	6 cut(s)	217, 494, 536, 620, 686, 1516
AflIII	ACRYGT	3 cut(s)	552, 716, 1547
AgsI	TTSAA	6 cut(s)	319, 1064, 1082, 1124, 1193, 1621
AjiI	CACGTC	1 cut(s)	872
AjnI	CCWGG	6 cut(s)	613, 645, 679, 685, 894, 1672
AjuI	GAANNNNNNNTTGG	4 cut(s)	903, 935, 1551, 1583
Alw21I	GWGCWC	1 cut(s)	161
Alw26I	GTCTC	4 cut(s)	190, 531, 779, 1495
AlwI	GGATC	3 cut(s)	202, 671, 1646
AlwNI	CAGNNNCTG	1 cut(s)	686
Aor51HI	AGCGCT	1 cut(s)	47
AoxI	GGCC	2 cut(s)	3, 683
ApeKI	GCWGC	4 cut(s)	163, 836, 1010, 1643
ApoI	RAATTY	4 cut(s)	861, 957, 1114, 1145
ArsI	GACNNNNNNTTYG	2 cut(s)	1214, 1246
AseI	ATTAAT	1 cut(s)	560
AspLEI	GCGC	3 cut(s)	48, 285, 713
AspS9I	GGNCC	4 cut(s)	220, 683, 1377, 1519
AsuHPI	GGTGA	3 cut(s)	49, 910, 1568
AsuII	TTCGAA	1 cut(s)	1143
AvaII	GGWCC	3 cut(s)	220, 1377, 1519
BalI	TGGCCA	1 cut(s)	5
BanII	GRGCYC	3 cut(s)	106, 131, 161
BarI	GAAGNNNNNNTAC	4 cut(s)	927, 959, 979, 1011
BauI	CACGAG	1 cut(s)	819
BbsI	GAAGAC	2 cut(s)	1245, 1628
Bbv12I	GWGCWC	1 cut(s)	161
BbvI	GCAGC	4 cut(s)	150, 823, 1022, 1655
BccI	CCATC	3 cut(s)	232, 618, 622
BceAI	ACGGC	1 cut(s)	18
BcgI	CGANNNNNNTGC	2 cut(s)	145, 179
BciT130I	CCWGG	6 cut(s)	615, 647, 681, 687, 896, 1674
BcoDI	GTCTC	4 cut(s)	190, 531, 779, 1495
BfaI	CTAG	1 cut(s)	825
BfmI	CTRYAG	1 cut(s)	837
BfoI	RGCGCY	1 cut(s)	49
BisI	GCNGC	4 cut(s)	164, 837, 1011, 1644
BlsI	GCNGC	4 cut(s)	165, 838, 1012, 1645
Bme1390I	CCNGG	6 cut(s)	615, 647, 681, 687, 896, 1674
Bme18I	GGWCC	3 cut(s)	220, 1377, 1519
BmgBI	CACGTC	1 cut(s)	872
BmgT120I	GGNCC	4 cut(s)	220, 683, 1377, 1519
BmiI	GGNNCC	6 cut(s)	222, 477, 651, 730, 751, 1308
BmrFI	CCNGG	6 cut(s)	615, 647, 681, 687, 896, 1674
BmrI	ACTGGG	2 cut(s)	208, 1613
BmsI	GCATC	4 cut(s)	824, 997, 1384, 1406
BmuI	ACTGGG	2 cut(s)	208, 1613
BpiI	GAAGAC	2 cut(s)	1245, 1628
Bpu10I	CCTNAGC	1 cut(s)	733
Bpu14I	TTCGAA	1 cut(s)	1143
BpuEI	CTTGAG	3 cut(s)	530, 761, 1613
BsaHI	GRCGYC	1 cut(s)	11
BsaJI	CCNNGG	4 cut(s)	6, 422, 614, 680
BsaWI	WCCGGW	1 cut(s)	169
BsaXI	ACNNNNNCTCC	4 cut(s)	511, 541, 789, 819
Bsc4I	CCNNNNNNNGG	6 cut(s)	217, 494, 536, 620, 686, 1516
Bse1I	ACTGG	4 cut(s)	99, 214, 1074, 1608
Bse3DI	GCAATG	3 cut(s)	1098, 1308, 1329
BseBI	CCWGG	6 cut(s)	615, 647, 681, 687, 896, 1674
BseDI	CCNNGG	4 cut(s)	6, 422, 614, 680
BseGI	GGATG	9 cut(s)	328, 503, 604, 629, 633, 1012, 1078, 1339, 1399
BseLI	CCNNNNNNNGG	6 cut(s)	217, 494, 536, 620, 686, 1516
BseMI	GCAATG	3 cut(s)	1098, 1308, 1329
BseMII	CTCAG	3 cut(s)	201, 984, 1233
BseNI	ACTGG	4 cut(s)	99, 214, 1074, 1608
BseRI	GAGGAG	2 cut(s)	52, 362
BseXI	GCAGC	4 cut(s)	150, 823, 1022, 1655
Bsh1236I	CGCG	1 cut(s)	713
Bsh1285I	CGRYCG	1 cut(s)	174
BshFI	GGCC	2 cut(s)	5, 685
BsiEI	CGRYCG	1 cut(s)	174
BsiHKAI	GWGCWC	1 cut(s)	161
BsiSI	CCGG	1 cut(s)	170
BslFI	GGGAC	1 cut(s)	278
BslI	CCNNNNNNNGG	6 cut(s)	217, 494, 536, 620, 686, 1516
BsmAI	GTCTC	4 cut(s)	190, 531, 779, 1495
BsmFI	GGGAC	1 cut(s)	278
BsmI	GAATGC	1 cut(s)	1044
BsnI	GGCC	2 cut(s)	5, 685
Bsp119I	TTCGAA	1 cut(s)	1143
Bsp1286I	GDGCHC	3 cut(s)	106, 131, 161
Bsp143I	GATC	3 cut(s)	194, 676, 1651
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	7 cut(s)	31, 208, 371, 392, 495, 892, 1235
BspANI	GGCC	2 cut(s)	5, 685
BspCNI	CTCAG	3 cut(s)	200, 983, 1232
BspFNI	CGCG	1 cut(s)	713
BspLI	GGNNCC	6 cut(s)	222, 477, 651, 730, 751, 1308
BspMAI	CTGCAG	1 cut(s)	841
BspPI	GGATC	3 cut(s)	202, 671, 1646
BspQI	GCTCTTC	1 cut(s)	426
BspT104I	TTCGAA	1 cut(s)	1143
BsrDI	GCAATG	3 cut(s)	1098, 1308, 1329
BsrI	ACTGG	4 cut(s)	99, 214, 1074, 1608
BssECI	CCNNGG	4 cut(s)	6, 422, 614, 680
BssMI	GATC	3 cut(s)	194, 676, 1651
BssNI	GRCGYC	1 cut(s)	11
BssSI	CACGAG	1 cut(s)	819
BssT1I	CCWWGG	1 cut(s)	6
Bst2BI	CACGAG	1 cut(s)	819
Bst2UI	CCWGG	6 cut(s)	615, 647, 681, 687, 896, 1674
Bst4CI	ACNGT	1 cut(s)	1417
Bst6I	CTCTTC	2 cut(s)	152, 426
BstACI	GRCGYC	1 cut(s)	11
BstAPI	GCANNNNNTGC	3 cut(s)	821, 1019, 1298
BstBI	TTCGAA	1 cut(s)	1143
BstC8I	GCNNGC	3 cut(s)	161, 201, 1294
BstDEI	CTNAG	5 cut(s)	187, 444, 733, 970, 1219
BstDSI	CCRYGG	1 cut(s)	6
BstF5I	GGATG	9 cut(s)	328, 503, 604, 629, 633, 1012, 1078, 1339, 1399
BstFNI	CGCG	1 cut(s)	713
BstH2I	RGCGCY	1 cut(s)	49
BstHHI	GCGC	3 cut(s)	48, 285, 713
BstKTI	GATC	3 cut(s)	197, 679, 1654
BstMAI	GTCTC	4 cut(s)	190, 531, 779, 1495
BstMBI	GATC	3 cut(s)	194, 676, 1651
BstMCI	CGRYCG	1 cut(s)	174
BstMWI	GCNNNNNNNGC	5 cut(s)	188, 821, 1019, 1289, 1298
BstNI	CCWGG	6 cut(s)	615, 647, 681, 687, 896, 1674
BstNSI	RCATGY	4 cut(s)	556, 848, 1296, 1551
BstSCI	CCNGG	6 cut(s)	613, 645, 679, 685, 894, 1672
BstSFI	CTRYAG	1 cut(s)	837
BstUI	CGCG	1 cut(s)	713
BstV1I	GCAGC	4 cut(s)	150, 823, 1022, 1655
BstV2I	GAAGAC	2 cut(s)	1245, 1628
BstX2I	RGATCY	1 cut(s)	1651
BstXI	CCANNNNNNTGG	1 cut(s)	94
BstYI	RGATCY	1 cut(s)	1651
BsuRI	GGCC	2 cut(s)	5, 685
BtgI	CCRYGG	1 cut(s)	6
BtrI	CACGTC	1 cut(s)	872
BtsCI	GGATG	9 cut(s)	328, 503, 604, 629, 633, 1012, 1078, 1339, 1399
BtsIMutI	CAGTG	1 cut(s)	978
Cac8I	GCNNGC	3 cut(s)	161, 201, 1294
CaiI	CAGNNNCTG	1 cut(s)	686
CfoI	GCGC	3 cut(s)	48, 285, 713
Cfr13I	GGNCC	4 cut(s)	220, 683, 1377, 1519
Csp6I	GTAC	3 cut(s)	485, 1551, 1572
CviQI	GTAC	3 cut(s)	485, 1551, 1572
DdeI	CTNAG	5 cut(s)	187, 444, 733, 970, 1219
DpnI	GATC	3 cut(s)	196, 678, 1653
DpnII	GATC	3 cut(s)	194, 676, 1651
DraIII	CACNNNGTG	1 cut(s)	923
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	152, 426
EarI	CTCTTC	2 cut(s)	152, 426
EciI	GGCGGA	3 cut(s)	20, 197, 510
Ecl136II	GAGCTC	1 cut(s)	159
Eco130I	CCWWGG	1 cut(s)	6
Eco24I	GRGCYC	3 cut(s)	106, 131, 161
Eco32I	GATATC	1 cut(s)	1371
Eco47I	GGWCC	3 cut(s)	220, 1377, 1519
Eco47III	AGCGCT	1 cut(s)	47
Eco53kI	GAGCTC	1 cut(s)	159
Eco57I	CTGAAG	3 cut(s)	450, 935, 1266
EcoICRI	GAGCTC	1 cut(s)	159
EcoO109I	RGGNCCY	1 cut(s)	683
EcoRII	CCWGG	6 cut(s)	613, 645, 679, 685, 894, 1672
EcoRV	GATATC	1 cut(s)	1371
EcoT14I	CCWWGG	1 cut(s)	6
EcoT22I	ATGCAT	1 cut(s)	1399
EcoT38I	GRGCYC	3 cut(s)	106, 131, 161
ErhI	CCWWGG	1 cut(s)	6
FalI	AAGNNNNNCTT	2 cut(s)	903, 935
FaqI	GGGAC	1 cut(s)	278
FauI	CCCGC	1 cut(s)	899
FauNDI	CATATG	1 cut(s)	490
Fnu4HI	GCNGC	4 cut(s)	164, 837, 1011, 1644
FokI	GGATG	9 cut(s)	335, 490, 611, 636, 640, 1019, 1085, 1346, 1406
FriOI	GRGCYC	3 cut(s)	106, 131, 161
Fsp4HI	GCNGC	4 cut(s)	164, 837, 1011, 1644
FspBI	CTAG	1 cut(s)	825
FspI	TGCGCA	1 cut(s)	284
GlaI	GCGC	3 cut(s)	47, 284, 712
GluI	GCNGC	4 cut(s)	164, 837, 1011, 1644
HaeII	RGCGCY	1 cut(s)	49
HaeIII	GGCC	2 cut(s)	5, 685
HapII	CCGG	1 cut(s)	170
HhaI	GCGC	3 cut(s)	48, 285, 713
Hin1I	GRCGYC	1 cut(s)	11
Hin6I	GCGC	3 cut(s)	46, 283, 711
HinP1I	GCGC	3 cut(s)	46, 283, 711
HinfI	GANTC	3 cut(s)	565, 1613, 1669
HpaII	CCGG	1 cut(s)	170
HphI	GGTGA	3 cut(s)	49, 910, 1568
Hpy166II	GTNNAC	4 cut(s)	87, 249, 853, 1559
Hpy188I	TCNGA	9 cut(s)	74, 124, 220, 423, 430, 954, 1207, 1222, 1402
Hpy188III	TCNNGA	4 cut(s)	404, 1121, 1264, 1592
Hpy8I	GTNNAC	4 cut(s)	87, 249, 853, 1559
Hpy99I	CGWCG	2 cut(s)	16, 1491
HpyAV	CCTTC	6 cut(s)	313, 905, 959, 1005, 1270, 1535
HpyCH4III	ACNGT	1 cut(s)	1417
HpyCH4IV	ACGT	2 cut(s)	718, 871
HpyF10VI	GCNNNNNNNGC	5 cut(s)	188, 821, 1019, 1289, 1298
HpyF3I	CTNAG	5 cut(s)	187, 444, 733, 970, 1219
HpySE526I	ACGT	2 cut(s)	718, 871
Hsp92I	GRCGYC	1 cut(s)	11
HspAI	GCGC	3 cut(s)	46, 283, 711
Kzo9I	GATC	3 cut(s)	194, 676, 1651
LguI	GCTCTTC	1 cut(s)	426
LmnI	GCTCC	4 cut(s)	497, 631, 655, 1306
Lsp1109I	GCAGC	4 cut(s)	150, 823, 1022, 1655
LweI	GCATC	4 cut(s)	824, 997, 1384, 1406
MaeI	CTAG	1 cut(s)	825
MaeII	ACGT	2 cut(s)	718, 871
MaeIII	GTNAC	3 cut(s)	515, 937, 1433
MalI	GATC	3 cut(s)	196, 678, 1653
MboI	GATC	3 cut(s)	194, 676, 1651
MboII	GAAGA	9 cut(s)	43, 46, 139, 443, 1123, 1250, 1279, 1490, 1633
MfeI	CAATTG	2 cut(s)	480, 696
MflI	RGATCY	1 cut(s)	1651
MhlI	GDGCHC	3 cut(s)	106, 131, 161
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	1 cut(s)	1622
MmeI	TCCRAC	2 cut(s)	198, 1154
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	1399
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	9 cut(s)	273, 396, 560, 573, 807, 858, 1002, 1136, 1705
MslI	CAYNNNNRTG	4 cut(s)	335, 413, 551, 879
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	191, 1390
MspI	CCGG	1 cut(s)	170
MspR9I	CCNGG	6 cut(s)	615, 647, 681, 687, 896, 1674
MunI	CAATTG	2 cut(s)	480, 696
Mva1269I	GAATGC	1 cut(s)	1044
MvaI	CCWGG	6 cut(s)	615, 647, 681, 687, 896, 1674
MvnI	CGCG	1 cut(s)	713
MwoI	GCNNNNNNNGC	5 cut(s)	188, 821, 1019, 1289, 1298
NcoI	CCATGG	1 cut(s)	6
NdeI	CATATG	1 cut(s)	490
NdeII	GATC	3 cut(s)	194, 676, 1651
NlaIV	GGNNCC	6 cut(s)	222, 477, 651, 730, 751, 1308
NmuCI	GTSAC	2 cut(s)	515, 937
NsbI	TGCGCA	1 cut(s)	284
NsiI	ATGCAT	1 cut(s)	1399
NspI	RCATGY	4 cut(s)	556, 848, 1296, 1551
NspV	TTCGAA	1 cut(s)	1143
PaeI	GCATGC	1 cut(s)	1296
PciI	ACATGT	2 cut(s)	552, 1547
PciSI	GCTCTTC	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	1 cut(s)	31
PctI	GAATGC	1 cut(s)	1044
PfeI	GAWTC	2 cut(s)	565, 1669
PflMI	CCANNNNNTGG	2 cut(s)	686, 1516
PfoI	TCCNGGA	1 cut(s)	1672
PkrI	GCNGC	4 cut(s)	165, 838, 1012, 1645
PleI	GAGTC	1 cut(s)	1621
PpsI	GAGTC	1 cut(s)	1621
PscI	ACATGT	2 cut(s)	552, 1547
PshBI	ATTAAT	1 cut(s)	560
PsiI	TTATAA	1 cut(s)	762
Psp124BI	GAGCTC	1 cut(s)	161
Psp6I	CCWGG	6 cut(s)	613, 645, 679, 685, 894, 1672
PspGI	CCWGG	6 cut(s)	613, 645, 679, 685, 894, 1672
PspN4I	GGNNCC	6 cut(s)	222, 477, 651, 730, 751, 1308
PspPI	GGNCC	4 cut(s)	220, 683, 1377, 1519
PstI	CTGCAG	1 cut(s)	841
PstNI	CAGNNNCTG	1 cut(s)	686
PsuI	RGATCY	1 cut(s)	1651
PvuII	CAGCTG	2 cut(s)	191, 1390
RsaI	GTAC	3 cut(s)	486, 1552, 1573
RsaNI	GTAC	3 cut(s)	485, 1551, 1572
RseI	CAYNNNNRTG	4 cut(s)	335, 413, 551, 879
SacI	GAGCTC	1 cut(s)	161
SapI	GCTCTTC	1 cut(s)	426
SaqAI	TTAA	9 cut(s)	273, 396, 560, 573, 807, 858, 1002, 1136, 1705
SatI	GCNGC	4 cut(s)	164, 837, 1011, 1644
Sau3AI	GATC	3 cut(s)	194, 676, 1651
Sau96I	GGNCC	4 cut(s)	220, 683, 1377, 1519
SchI	GAGTC	1 cut(s)	1622
ScrFI	CCNGG	6 cut(s)	615, 647, 681, 687, 896, 1674
SduI	GDGCHC	3 cut(s)	106, 131, 161
SfaNI	GCATC	4 cut(s)	824, 997, 1384, 1406
SfcI	CTRYAG	1 cut(s)	837
SfuI	TTCGAA	1 cut(s)	1143
SinI	GGWCC	3 cut(s)	220, 1377, 1519
SmiMI	CAYNNNNRTG	4 cut(s)	335, 413, 551, 879
SmlI	CTYRAG	3 cut(s)	509, 776, 1592
SmoI	CTYRAG	3 cut(s)	509, 776, 1592
SphI	GCATGC	1 cut(s)	1296
SsiI	CCGC	7 cut(s)	31, 208, 371, 392, 495, 892, 1235
SspI	AATATT	2 cut(s)	400, 1140
SspMI	CTAG	1 cut(s)	825
SstI	GAGCTC	1 cut(s)	161
StyD4I	CCNGG	6 cut(s)	613, 645, 679, 685, 894, 1672
StyI	CCWWGG	1 cut(s)	6
TaaI	ACNGT	1 cut(s)	1417
TaiI	ACGT	2 cut(s)	721, 874
TaqI	TCGA	4 cut(s)	155, 675, 1143, 1486
TfiI	GAWTC	2 cut(s)	565, 1669
Tru1I	TTAA	9 cut(s)	273, 396, 560, 573, 807, 858, 1002, 1136, 1705
Tru9I	TTAA	9 cut(s)	273, 396, 560, 573, 807, 858, 1002, 1136, 1705
TscAI	CASTG	1 cut(s)	978
TseFI	GTSAC	2 cut(s)	515, 937
TseI	GCWGC	4 cut(s)	163, 836, 1010, 1643
Tsp45I	GTSAC	2 cut(s)	515, 937
TspDTI	ATGAA	7 cut(s)	327, 578, 654, 987, 1491, 1643, 1682
TspGWI	ACGGA	2 cut(s)	947, 1346
TspRI	CASTG	1 cut(s)	978
Van91I	CCANNNNNTGG	2 cut(s)	686, 1516
VpaK11BI	GGWCC	3 cut(s)	220, 1377, 1519
VspI	ATTAAT	1 cut(s)	560
XapI	RAATTY	4 cut(s)	861, 957, 1114, 1145
XceI	RCATGY	4 cut(s)	556, 848, 1296, 1551
XcmI	CCANNNNNNNNNTGG	2 cut(s)	147, 1387
XspI	CTAG	1 cut(s)	825
Zsp2I	ATGCAT	1 cut(s)	1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.