Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003659

Physical Location & Seq

Genomic Coordinates Reverse (-)

13427751 .. 13429914

Gene Structure 2164 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0161800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2145 bp

ATGGATTGCATTTCTTCTGTTACTTTTTCCATTCTTATTAATGGCAAGCAAGAAGGTCATTTTGTTCCTTCTAGGGGTGTTCGTCAGGGAGATCCTCTCTCTCCCTATATTTTTATTCTCTGCATGGAACCTCTTATTAGACATTTAAATCACGTTGCTTCTAATTCTAAGAACCATGTTGGCATTCTCTCCTCCCCTGGGGGACATAGAATATCCAATCTTATGTTTGCTGATGATTGTTTGATTTTTGCCAGAGCGTCCACCAAGGCAGCTCATAACATCTCCAGAATTTTCCATGATTTTGCCCAAGCATCGGGGCAGAAGATCAACTTAGATAAGTCTTCTATTTTCTATTCCTCTAAGATCTCTAATAGTACTAAATCTGATATTACAAGTATTTTGGGAATTCAACACAAGGTTTCAATTGGTAAATATCTAGGGATCCATAATATTGTTTTCTGGAAAGACCCCTTGAATGCTAAAGAATTACTTTTGAAGATCTCAAATAAGCTCAGTGGTTGGAAAAAGGCCACCCTTTCTAGAGCGGGGAAGCTTACTCTTATAAAATCTAATATTGCTGGAATGCCAAACCATGTTATGTCTTGCTTCAATTGCCCTCCAAAAGTTACTAAAGCCATTGATAAAGAAACTAGATCTTTCTTCTGGGGTAAGGATTGTCATTCCCCCCCAGTTGCTTGGAACCAAATTTGTCTGCCTAAATCCTTAGGTGGTCTTGGAATTCGGCTAGCAGCTTCCTTCAACAAGGCTGCTTTGGCAAAATTAGGCTGGAAAGTGATCTCTGATCATGATAACTGGTGGGTGGATATTGTTCGTAGGAAATACTTAAGAAAACATGCTTTTTTCATGCAAAATAAGCAGGCCAACCATTCTATGGCCTGGAAAGGTATTCTTGATAATAGAGATCTTTTAATCCAAGGTATGCGCTGGATTGTTGGTAATGGTACTGACATCAAATTCTGGACTTTCAATTGGGCCTTTTCTTTTCCTTTGATCAATCTTATTTCGACTACTAATAGAATTTCTATTGATATTGATGAGAATGTTAGTGATTATATTGTTAATGGCTGTTGGAATGTTAATAAACTTTCTATTTTCCTTGATCATGATACAGTTAACTCTATTTTAAGTATTCCTCTTCCTGCTTTGGACTCTAGGGATGAATTTGTTTGGGGGCCGACCTCCAACGGTATTTTTTCTGTTAAATCTGCCACTTGGCTTCAATGTGATTCGGTTGCTTCCCATTCGAGGGTTAAAATTTTGAATGAAATCTGGAGACTTAACATTCCTCCTAAGGTCAAGATTTTCTCTTGGCTCTTAGCTAGGGGAAGATTGAAAACTAGGGCAAGACTTGCTCGTTATTCTACTAATTATGATTCTTTGTGTGCCCTTTGCAGCTCAGGGGATGAGGACTTAAACCACATTTTCTTCTCCTGCCCCTTTGCTGCAAATGTTTGGCGCTCTGCTGGCATTACCAATACAGATTTCCAAAACTTTGAAGAATGGTTTCTTTCCTGGTTCAGGAAGGATTACCAAAAGTCTACTACTGAAAATCTTCTCCTTCTTTGCTGGAAAATTTGGGAGGCGAGGAATAACCTCATCTTCAGACATTCTCCCTCTCTTCCTAACATGGTGGTTCATGTTGCGGCATCCATTGGTGAGAATTACAGAAGGAATAACCCTTGCCTTTTCAAGGGTCCTGCTTCTACCTCTCAAGTTATTCGCTGGTCTCCTCCTCCTGCTGGCTTCGCCAAGCTCAATTTCGATGGTTCTGTTGTCAACAATAAGAAAGCAGCTGCTGGTTTTGTTATCAGGGATCATGATGGTTCTCCCCTTTTTGCTGGTGCGAGAGCTATTGGTCATGCTTCTGTCCCCATTGCTGAAGGAAGTGCTGTTCGTGATGGTCTTTATCATGCCTTCCTCCTTAACTGTCGAAAGCTTTATGTCGAAGGTGACTCCAAGTTAATTATAGACTCCATCAACAAAAAATGTGCTCCTCCTTGGCGTCTTCGTACTCTTGTGAAAGACATCCTCAGTCTGGCTAGCAATTTCGAAGCTGTTTCCTTCTCTTATGTTCCCAGGGAAGCCAACTTCGTTGCTGATGCTGTTACAAATATGGGTCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0003973 GO:0004457 GO:0004458 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006081 GO:0008144 GO:0008150 GO:0008152 GO:0008720 GO:0008891 GO:0009056 GO:0009438 GO:0009987 GO:0016491 GO:0016614 GO:0016616 GO:0016898 GO:0016899 GO:0017076 GO:0019154 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042180 GO:0042182 GO:0042802 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046185 GO:0048037 GO:0050660 GO:0050662 GO:0051596 GO:0055114 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

FAD-oxidase_C FAD_binding_4

Protein Analysis

714

Amino Acids

80.1

Weight (kDa)

9.6

Isoelectric Point (pI)

36.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RVT_1	PF00078	12 - 148	1.5e-15	Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT	PF13966	405 - 492	3.9e-20	zinc-binding in reverse transcriptase
RVT_3	PF13456	593 - 712	1.3e-23	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003659)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06580
fragaria_vesca	FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120 FvH4_6g21120
malus_domestica	MD12G1046600.v1.1 MD12G1046700.v1.1 MD14G1045600.v1.1
prunus_persica	Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088800_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1 Prupe.7G088900_v2.0.a1
pyrus_communis	pycom12g04020 pycom12g04030
rosa_chinensis	RchiOBHm_Chr3g0477531
rosa_laevigata	RLG00000023711
rosa_multiflora	Rmu_co8386717.1_g000001 Rmu_sc0000775.1_g000016
rosa_roxburghii	Rroxscaffold_6G00403860 Rroxscaffold_6G00403870 Rroxscaffold_6G00404560
rosa_rugosa	Rorug03G0161800
rosa_samantha	Rh3AG211800 Rh3BG245600 Rh3CG239200 Rh3DG238700
rosa_wichuraiana	Rw3G019190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	563
AccB7I	CCANNNNNTGG	1 cut(s)	892
AccBSI	CCGCTC	1 cut(s)	545
AccI	GTMKAC	1 cut(s)	1559
AciI	CCGC	2 cut(s)	545, 1664
AclWI	GGATC	4 cut(s)	86, 436, 449, 1842
AcsI	RAATTY	9 cut(s)	288, 405, 705, 738, 974, 1038, 1181, 1275, 1593
AcuI	CTGAAG	2 cut(s)	1606, 1920
AcyI	GRCGYC	1 cut(s)	2023
AfaI	GTAC	3 cut(s)	376, 964, 2032
AflII	CTTAAG	1 cut(s)	844
AjnI	CCWGG	4 cut(s)	196, 896, 1532, 2096
AjuI	GAANNNNNNNTTGG	4 cut(s)	1487, 1519, 1763, 1795
AloI	GAACNNNNNNTCC	2 cut(s)	1896, 1928
Alw21I	GWGCWC	1 cut(s)	2014
Alw26I	GTCTC	2 cut(s)	1288, 1752
AlwI	GGATC	4 cut(s)	86, 436, 449, 1842
AlwNI	CAGNNNCTG	1 cut(s)	1817
AoxI	GGCC	5 cut(s)	528, 879, 894, 993, 1193
ApeKI	GCWGC	7 cut(s)	269, 749, 767, 1413, 1463, 1811, 1814
ApoI	RAATTY	9 cut(s)	288, 405, 705, 738, 974, 1038, 1181, 1275, 1593
AseI	ATTAAT	1 cut(s)	39
Asp700I	GAANNNNTTC	2 cut(s)	1524, 1572
AspLEI	GCGC	2 cut(s)	945, 1479
AspS9I	GGNCC	3 cut(s)	993, 1193, 1715
AsuHPI	GGTGA	2 cut(s)	1688, 1982
AsuII	TTCGAA	1 cut(s)	2070
AsuNHI	GCTAGC	2 cut(s)	745, 2060
AvaII	GGWCC	1 cut(s)	1715
AxyI	CCTNAGG	2 cut(s)	724, 1311
BaeGI	GKGCMC	1 cut(s)	1408
BamHI	GGATCC	1 cut(s)	441
BbsI	GAAGAC	2 cut(s)	333, 2018
Bbv12I	GWGCWC	1 cut(s)	2014
BbvI	GCAGC	7 cut(s)	281, 754, 761, 1425, 1450, 1801, 1823
BccI	CCATC	4 cut(s)	1778, 1835, 1913, 2003
BciT130I	CCWGG	4 cut(s)	198, 898, 1534, 2098
BclI	TGATCA	3 cut(s)	802, 1011, 1120
BcoDI	GTCTC	2 cut(s)	1288, 1752
BfaI	CTAG	9 cut(s)	72, 437, 540, 651, 746, 1173, 1341, 1359, 2061
BfoI	RGCGCY	1 cut(s)	1480
BfrI	CTTAAG	1 cut(s)	844
BglII	AGATCT	4 cut(s)	363, 498, 653, 922
BisI	GCNGC	8 cut(s)	270, 750, 768, 1414, 1464, 1665, 1812, 1815
BlsI	GCNGC	8 cut(s)	271, 751, 769, 1415, 1465, 1666, 1813, 1816
BmcAI	AGTACT	1 cut(s)	376
Bme1390I	CCNGG	4 cut(s)	198, 898, 1534, 2098
Bme18I	GGWCC	1 cut(s)	1715
BmgT120I	GGNCC	3 cut(s)	993, 1193, 1715
BmiI	GGNNCC	5 cut(s)	129, 443, 701, 1194, 1716
BmrFI	CCNGG	4 cut(s)	198, 898, 1534, 2098
BmrI	ACTGGG	1 cut(s)	683
BmsI	GCATC	3 cut(s)	320, 1676, 2110
BmtI	GCTAGC	2 cut(s)	749, 2064
BmuI	ACTGGG	1 cut(s)	683
BpiI	GAAGAC	2 cut(s)	333, 2018
BplI	GAGNNNNNCTC	2 cut(s)	81, 113
BpmI	CTGGAG	2 cut(s)	268, 1312
Bpu10I	CCTNAGC	1 cut(s)	1417
Bpu14I	TTCGAA	1 cut(s)	2070
BpuEI	CTTGAG	1 cut(s)	1716
BsaHI	GRCGYC	1 cut(s)	2023
BsaI	GGTCTC	1 cut(s)	1752
BsaJI	CCNNGG	7 cut(s)	196, 197, 264, 934, 2018, 2096, 2097
Bse1I	ACTGG	2 cut(s)	689, 818
Bse21I	CCTNAGG	2 cut(s)	724, 1311
Bse3DI	GCAATG	1 cut(s)	1893
BseBI	CCWGG	4 cut(s)	198, 898, 1534, 2098
BseDI	CCNNGG	7 cut(s)	196, 197, 264, 934, 2018, 2096, 2097
BseGI	GGATG	4 cut(s)	1183, 1429, 1667, 2046
BseMI	GCAATG	1 cut(s)	1893
BseMII	CTCAG	3 cut(s)	526, 1431, 2065
BseNI	ACTGG	2 cut(s)	689, 818
BseRI	GAGGAG	4 cut(s)	181, 1740, 1743, 2004
BseSI	GKGCMC	1 cut(s)	1408
BseXI	GCAGC	7 cut(s)	281, 754, 761, 1425, 1450, 1801, 1823
BshFI	GGCC	5 cut(s)	530, 881, 896, 995, 1195
BsiHKAI	GWGCWC	1 cut(s)	2014
BslFI	GGGAC	2 cut(s)	216, 1874
BsmAI	GTCTC	2 cut(s)	1288, 1752
BsmFI	GGGAC	2 cut(s)	216, 1874
BsmI	GAATGC	3 cut(s)	183, 481, 588
BsnI	GGCC	5 cut(s)	530, 881, 896, 995, 1195
Bso31I	GGTCTC	1 cut(s)	1752
Bsp119I	TTCGAA	1 cut(s)	2070
Bsp1286I	GDGCHC	2 cut(s)	1408, 2014
BspACI	CCGC	2 cut(s)	545, 1664
BspANI	GGCC	5 cut(s)	530, 881, 896, 995, 1195
BspCNI	CTCAG	3 cut(s)	525, 1430, 2064
BspHI	TCATGA	3 cut(s)	805, 1123, 1837
BspLI	GGNNCC	5 cut(s)	129, 443, 701, 1194, 1716
BspOI	GCTAGC	2 cut(s)	749, 2064
BspPI	GGATC	4 cut(s)	86, 436, 449, 1842
BspT104I	TTCGAA	1 cut(s)	2070
BspTI	CTTAAG	1 cut(s)	844
BspTNI	GGTCTC	1 cut(s)	1752
BsrBI	CCGCTC	1 cut(s)	545
BsrDI	GCAATG	1 cut(s)	1893
BsrI	ACTGG	2 cut(s)	689, 818
BssECI	CCNNGG	7 cut(s)	196, 197, 264, 934, 2018, 2096, 2097
BssNI	GRCGYC	1 cut(s)	2023
BssT1I	CCWWGG	3 cut(s)	264, 934, 2018
Bst2UI	CCWGG	4 cut(s)	198, 898, 1534, 2098
Bst4CI	ACNGT	3 cut(s)	1132, 1208, 1949
Bst6I	CTCTTC	2 cut(s)	1161, 1644
BstACI	GRCGYC	1 cut(s)	2023
BstAFI	CTTAAG	1 cut(s)	844
BstAPI	GCANNNNNTGC	1 cut(s)	1370
BstBI	TTCGAA	1 cut(s)	2070
BstC8I	GCNNGC	6 cut(s)	47, 747, 879, 1486, 1762, 2062
BstDEI	CTNAG	9 cut(s)	168, 331, 360, 512, 724, 1311, 1336, 1417, 2051
BstENI	CCTNNNNNAGG	2 cut(s)	1537, 1709
BstF5I	GGATG	4 cut(s)	1183, 1429, 1667, 2046
BstH2I	RGCGCY	1 cut(s)	1480
BstHHI	GCGC	2 cut(s)	945, 1479
BstMAI	GTCTC	2 cut(s)	1288, 1752
BstMWI	GCNNNNNNNGC	6 cut(s)	612, 773, 874, 1370, 1485, 1766
BstNI	CCWGG	4 cut(s)	198, 898, 1534, 2098
BstNSI	RCATGY	1 cut(s)	857
BstSCI	CCNGG	4 cut(s)	196, 896, 1532, 2096
BstSLI	GKGCMC	1 cut(s)	1408
BstV1I	GCAGC	7 cut(s)	281, 754, 761, 1425, 1450, 1801, 1823
BstV2I	GAAGAC	2 cut(s)	333, 2018
BstX2I	RGATCY	6 cut(s)	91, 363, 441, 498, 653, 922
BstXI	CCANNNNNNTGG	1 cut(s)	696
BstYI	RGATCY	6 cut(s)	91, 363, 441, 498, 653, 922
Bsu36I	CCTNAGG	2 cut(s)	724, 1311
BsuRI	GGCC	5 cut(s)	530, 881, 896, 995, 1195
BtsCI	GGATG	4 cut(s)	1183, 1429, 1667, 2046
BtsIMutI	CAGTG	1 cut(s)	520
Cac8I	GCNNGC	6 cut(s)	47, 747, 879, 1486, 1762, 2062
CaiI	CAGNNNCTG	1 cut(s)	1817
CciI	TCATGA	3 cut(s)	805, 1123, 1837
CfoI	GCGC	2 cut(s)	945, 1479
Cfr13I	GGNCC	3 cut(s)	993, 1193, 1715
CseI	GACGC	2 cut(s)	246, 2012
Csp6I	GTAC	3 cut(s)	375, 963, 2031
CviQI	GTAC	3 cut(s)	375, 963, 2031
DdeI	CTNAG	9 cut(s)	168, 331, 360, 512, 724, 1311, 1336, 1417, 2051
DraI	TTTAAA	1 cut(s)	147
Eam1104I	CTCTTC	2 cut(s)	1161, 1644
EarI	CTCTTC	2 cut(s)	1161, 1644
Eco130I	CCWWGG	3 cut(s)	264, 934, 2018
Eco31I	GGTCTC	1 cut(s)	1752
Eco47I	GGWCC	1 cut(s)	1715
Eco57I	CTGAAG	2 cut(s)	1606, 1920
Eco81I	CCTNAGG	2 cut(s)	724, 1311
EcoNI	CCTNNNNNAGG	2 cut(s)	1537, 1709
EcoO109I	RGGNCCY	1 cut(s)	1715
EcoRI	GAATTC	2 cut(s)	405, 738
EcoRII	CCWGG	4 cut(s)	196, 896, 1532, 2096
EcoT14I	CCWWGG	3 cut(s)	264, 934, 2018
ErhI	CCWWGG	3 cut(s)	264, 934, 2018
FalI	AAGNNNNNCTT	6 cut(s)	314, 346, 474, 506, 894, 926
FaqI	GGGAC	2 cut(s)	216, 1874
FauI	CCCGC	1 cut(s)	538
FbaI	TGATCA	3 cut(s)	802, 1011, 1120
FblI	GTMKAC	1 cut(s)	1559
Fnu4HI	GCNGC	8 cut(s)	270, 750, 768, 1414, 1464, 1665, 1812, 1815
FokI	GGATG	4 cut(s)	1190, 1436, 1654, 2033
Fsp4HI	GCNGC	8 cut(s)	270, 750, 768, 1414, 1464, 1665, 1812, 1815
FspBI	CTAG	9 cut(s)	72, 437, 540, 651, 746, 1173, 1341, 1359, 2061
GlaI	GCGC	2 cut(s)	944, 1478
GluI	GCNGC	8 cut(s)	270, 750, 768, 1414, 1464, 1665, 1812, 1815
GsuI	CTGGAG	2 cut(s)	268, 1312
HaeII	RGCGCY	1 cut(s)	1480
HaeIII	GGCC	5 cut(s)	530, 881, 896, 995, 1195
HgaI	GACGC	2 cut(s)	246, 2012
HhaI	GCGC	2 cut(s)	945, 1479
Hin1I	GRCGYC	1 cut(s)	2023
Hin6I	GCGC	2 cut(s)	943, 1477
HinP1I	GCGC	2 cut(s)	943, 1477
HincII	GTYRAC	2 cut(s)	1135, 1798
HindII	GTYRAC	2 cut(s)	1135, 1798
HindIII	AAGCTT	2 cut(s)	551, 1955
HinfI	GANTC	5 cut(s)	1169, 1247, 1394, 1973, 1991
HpaI	GTTAAC	1 cut(s)	1135
HphI	GGTGA	2 cut(s)	1688, 1982
Hpy166II	GTNNAC	4 cut(s)	261, 1135, 1560, 1798
Hpy188I	TCNGA	3 cut(s)	385, 802, 1625
Hpy8I	GTNNAC	4 cut(s)	261, 1135, 1560, 1798
HpyCH4III	ACNGT	3 cut(s)	1132, 1208, 1949
HpyCH4IV	ACGT	1 cut(s)	153
HpyCH4V	TGCA	5 cut(s)	9, 123, 868, 1413, 1466
HpyF10VI	GCNNNNNNNGC	6 cut(s)	612, 773, 874, 1370, 1485, 1766
HpyF3I	CTNAG	9 cut(s)	168, 331, 360, 512, 724, 1311, 1336, 1417, 2051
HpySE526I	ACGT	1 cut(s)	153
Hsp92I	GRCGYC	1 cut(s)	2023
HspAI	GCGC	2 cut(s)	943, 1477
Ksp22I	TGATCA	3 cut(s)	802, 1011, 1120
KspAI	GTTAAC	1 cut(s)	1135
LmnI	GCTCC	1 cut(s)	2017
Lsp1109I	GCAGC	7 cut(s)	281, 754, 761, 1425, 1450, 1801, 1823
LweI	GCATC	3 cut(s)	320, 1676, 2110
MaeI	CTAG	9 cut(s)	72, 437, 540, 651, 746, 1173, 1341, 1359, 2061
MaeII	ACGT	1 cut(s)	153
MaeIII	GTNAC	4 cut(s)	19, 625, 1970, 2125
MbiI	CCGCTC	1 cut(s)	545
MfeI	CAATTG	3 cut(s)	423, 610, 988
MflI	RGATCY	6 cut(s)	91, 363, 441, 498, 653, 922
MhlI	GDGCHC	2 cut(s)	1408, 2014
MlyI	GAGTC	3 cut(s)	1163, 1967, 1985
MmeI	TCCRAC	3 cut(s)	500, 1070, 1227
MroXI	GAANNNNTTC	2 cut(s)	1524, 1572
MspA1I	CMGCKG	1 cut(s)	1814
MspCI	CTTAAG	1 cut(s)	844
MspR9I	CCNGG	4 cut(s)	198, 898, 1534, 2098
MunI	CAATTG	3 cut(s)	423, 610, 988
Mva1269I	GAATGC	3 cut(s)	183, 481, 588
MvaI	CCWGG	4 cut(s)	198, 898, 1534, 2098
MwoI	GCNNNNNNNGC	6 cut(s)	612, 773, 874, 1370, 1485, 1766
NheI	GCTAGC	2 cut(s)	745, 2060
NlaIV	GGNNCC	5 cut(s)	129, 443, 701, 1194, 1716
NmuCI	GTSAC	1 cut(s)	1970
NspI	RCATGY	1 cut(s)	857
NspV	TTCGAA	1 cut(s)	2070
PagI	TCATGA	3 cut(s)	805, 1123, 1837
PasI	CCCWGGG	2 cut(s)	197, 2097
PctI	GAATGC	3 cut(s)	183, 481, 588
PdmI	GAANNNNTTC	2 cut(s)	1524, 1572
PfeI	GAWTC	2 cut(s)	1247, 1394
PflMI	CCANNNNNTGG	1 cut(s)	892
PkrI	GCNGC	8 cut(s)	271, 751, 769, 1415, 1465, 1666, 1813, 1816
PleI	GAGTC	3 cut(s)	1163, 1967, 1985
PpsI	GAGTC	3 cut(s)	1163, 1967, 1985
PpuMI	RGGWCCY	1 cut(s)	1715
PshBI	ATTAAT	1 cut(s)	39
PsiI	TTATAA	1 cut(s)	563
Psp5II	RGGWCCY	1 cut(s)	1715
Psp6I	CCWGG	4 cut(s)	196, 896, 1532, 2096
PspGI	CCWGG	4 cut(s)	196, 896, 1532, 2096
PspN4I	GGNNCC	5 cut(s)	129, 443, 701, 1194, 1716
PspPI	GGNCC	3 cut(s)	993, 1193, 1715
PspPPI	RGGWCCY	1 cut(s)	1715
PstNI	CAGNNNCTG	1 cut(s)	1817
PsuI	RGATCY	6 cut(s)	91, 363, 441, 498, 653, 922
PvuII	CAGCTG	1 cut(s)	1814
RsaI	GTAC	3 cut(s)	376, 964, 2032
RsaNI	GTAC	3 cut(s)	375, 963, 2031
SatI	GCNGC	8 cut(s)	270, 750, 768, 1414, 1464, 1665, 1812, 1815
Sau96I	GGNCC	3 cut(s)	993, 1193, 1715
ScaI	AGTACT	1 cut(s)	376
SchI	GAGTC	3 cut(s)	1163, 1967, 1985
ScrFI	CCNGG	4 cut(s)	198, 898, 1534, 2098
SduI	GDGCHC	2 cut(s)	1408, 2014
SfaNI	GCATC	3 cut(s)	320, 1676, 2110
SfuI	TTCGAA	1 cut(s)	2070
SinI	GGWCC	1 cut(s)	1715
SmiI	ATTTAAAT	1 cut(s)	147
SmlI	CTYRAG	2 cut(s)	844, 1731
SmoI	CTYRAG	2 cut(s)	844, 1731
SsiI	CCGC	2 cut(s)	545, 1664
SspI	AATATT	2 cut(s)	451, 574
SspMI	CTAG	9 cut(s)	72, 437, 540, 651, 746, 1173, 1341, 1359, 2061
StyD4I	CCNGG	4 cut(s)	196, 896, 1532, 2096
StyI	CCWWGG	3 cut(s)	264, 934, 2018
SwaI	ATTTAAAT	1 cut(s)	147
TaaI	ACNGT	3 cut(s)	1132, 1208, 1949
TaiI	ACGT	1 cut(s)	156
TaqI	TCGA	6 cut(s)	1025, 1265, 1782, 1951, 1965, 2070
TatI	WGTACW	1 cut(s)	374
TauI	GCSGC	1 cut(s)	1667
TfiI	GAWTC	2 cut(s)	1247, 1394
TscAI	CASTG	1 cut(s)	520
TseFI	GTSAC	1 cut(s)	1970
TseI	GCWGC	7 cut(s)	269, 749, 767, 1413, 1463, 1811, 1814
Tsp45I	GTSAC	1 cut(s)	1970
TspDTI	ATGAA	4 cut(s)	853, 1194, 1299, 1646
TspRI	CASTG	1 cut(s)	520
Van91I	CCANNNNNTGG	1 cut(s)	892
Vha464I	CTTAAG	1 cut(s)	844
VpaK11BI	GGWCC	1 cut(s)	1715
VspI	ATTAAT	1 cut(s)	39
XagI	CCTNNNNNAGG	2 cut(s)	1537, 1709
XapI	RAATTY	9 cut(s)	288, 405, 705, 738, 974, 1038, 1181, 1275, 1593
XbaI	TCTAGA	1 cut(s)	539
XceI	RCATGY	1 cut(s)	857
XcmI	CCANNNNNNNNNTGG	1 cut(s)	889
XmiI	GTMKAC	1 cut(s)	1559
XmnI	GAANNNNTTC	2 cut(s)	1524, 1572
XspI	CTAG	9 cut(s)	72, 437, 540, 651, 746, 1173, 1341, 1359, 2061
ZrmI	AGTACT	1 cut(s)	376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.