DDT domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12400 |
| fragaria_vesca | FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 |
| malus_domestica | MD03G1169900.v1.1 MD11G1187100.v1.1 |
| prunus_persica | Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 |
| pyrus_communis | pycom03g12620 pycom11g16390 pycom11g16400 |
| rosa_chinensis | RchiOBHm_Chr5g0051171 |
| rosa_laevigata | RLG00000034759 |
| rosa_multiflora | Rmu_co8421621.1_g000001 Rmu_sc0000446.1_g000011 Rmu_sc0020509.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00029270 Rroxscaffold_1G00029280 |
| rosa_rugosa | Rorug05G0266200 |
| rosa_samantha | Rh5AG338600 Rh5BG348500 Rh5CG375600 Rh5DG361400 |
| rosa_wichuraiana | Rw0G023670 Rw5G031980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 407 |
| Acc65I | GGTACC | 1 cut(s) | 4674 |
| AccB1I | GGYRCC | 2 cut(s) | 743, 4674 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 2575, 3066, 3330 |
| AccI | GTMKAC | 2 cut(s) | 3013, 4420 |
| AccII | CGCG | 2 cut(s) | 75, 3387 |
| AccIII | TCCGGA | 3 cut(s) | 3448, 3721, 4164 |
| AciI | CCGC | 9 cut(s) | 314, 848, 1187, 2030, 2232, 3342, 3500, 4147, 4772 |
| AclWI | GGATC | 7 cut(s) | 28, 884, 897, 1560, 2021, 2476, 4645 |
| AcoI | YGGCCR | 1 cut(s) | 2979 |
| AfeI | AGCGCT | 2 cut(s) | 805, 1039 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 390, 1222, 1504, 1549, 2134, 2575, 2751, 3066, 3330 |
| AflIII | ACRYGT | 2 cut(s) | 3481, 3799 |
| AjiI | CACGTC | 1 cut(s) | 3482 |
| AjnI | CCWGG | 9 cut(s) | 747, 1543, 1975, 2745, 3433, 3488, 3629, 3862, 4153 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2548, 2580, 3101, 3133 |
| AleI | CACNNNNGTG | 3 cut(s) | 1733, 3163, 4611 |
| Alw21I | GWGCWC | 3 cut(s) | 272, 1975, 3668 |
| Alw26I | GTCTC | 8 cut(s) | 237, 755, 923, 1353, 2500, 2807, 2909, 3671 |
| Alw44I | GTGCAC | 2 cut(s) | 1971, 3664 |
| AlwI | GGATC | 7 cut(s) | 28, 884, 897, 1560, 2021, 2476, 4645 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1652, 2435, 3464 |
| Ama87I | CYCGRG | 2 cut(s) | 2906, 3763 |
| Aor13HI | TCCGGA | 3 cut(s) | 3448, 3721, 4164 |
| Aor51HI | AGCGCT | 2 cut(s) | 805, 1039 |
| AoxI | GGCC | 4 cut(s) | 2213, 2979, 4148, 4495 |
| ApaLI | GTGCAC | 2 cut(s) | 1971, 3664 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 215, 247 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 991, 1571, 3078 |
| Asp718I | GGTACC | 1 cut(s) | 4674 |
| AspA2I | CCTAGG | 2 cut(s) | 385, 2402 |
| AspLEI | GCGC | 5 cut(s) | 806, 1040, 2009, 2440, 3389 |
| AspS9I | GGNCC | 8 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4149, 4531 |
| AsuC2I | CCSGG | 1 cut(s) | 58 |
| AsuII | TTCGAA | 1 cut(s) | 482 |
| AvaI | CYCGRG | 2 cut(s) | 2906, 3763 |
| AvaII | GGWCC | 7 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4531 |
| AvrII | CCTAGG | 2 cut(s) | 385, 2402 |
| AxyI | CCTNAGG | 1 cut(s) | 1929 |
| BaeGI | GKGCMC | 3 cut(s) | 748, 1975, 3668 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2678, 2711 |
| BalI | TGGCCA | 1 cut(s) | 2981 |
| BamHI | GGATCC | 1 cut(s) | 889 |
| BanI | GGYRCC | 2 cut(s) | 743, 4674 |
| BanII | GRGCYC | 3 cut(s) | 272, 2311, 3203 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2670, 2702 |
| BauI | CACGAG | 2 cut(s) | 152, 234 |
| BbsI | GAAGAC | 4 cut(s) | 1229, 1727, 4244, 4749 |
| Bbv12I | GWGCWC | 3 cut(s) | 272, 1975, 3668 |
| BceAI | ACGGC | 1 cut(s) | 3173 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4328, 4362 |
| BciT130I | CCWGG | 9 cut(s) | 749, 1545, 1977, 2747, 3435, 3490, 3631, 3864, 4155 |
| BciVI | GTATCC | 2 cut(s) | 1114, 1465 |
| BclI | TGATCA | 2 cut(s) | 4585, 4591 |
| BcnI | CCSGG | 1 cut(s) | 58 |
| BcoDI | GTCTC | 8 cut(s) | 237, 755, 923, 1353, 2500, 2807, 2909, 3671 |
| BfmI | CTRYAG | 3 cut(s) | 2047, 2632, 4352 |
| BfoI | RGCGCY | 2 cut(s) | 807, 1041 |
| BfuI | GTATCC | 2 cut(s) | 1114, 1465 |
| BglII | AGATCT | 6 cut(s) | 853, 1682, 2720, 3956, 4443, 4781 |
| BlnI | CCTAGG | 2 cut(s) | 385, 2402 |
| BlpI | GCTNAGC | 3 cut(s) | 807, 3170, 3202 |
| BmcAI | AGTACT | 2 cut(s) | 1075, 1288 |
| Bme18I | GGWCC | 7 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4531 |
| BmeT110I | CYCGRG | 2 cut(s) | 2906, 3763 |
| BmgBI | CACGTC | 1 cut(s) | 3482 |
| BmgT120I | GGNCC | 8 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4149, 4531 |
| BmiI | GGNNCC | 8 cut(s) | 189, 745, 891, 1531, 2310, 4151, 4532, 4676 |
| BmrI | ACTGGG | 2 cut(s) | 474, 774 |
| BmuI | ACTGGG | 2 cut(s) | 474, 774 |
| BpiI | GAAGAC | 4 cut(s) | 1229, 1727, 4244, 4749 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 920, 952, 1006, 1038 |
| BpmI | CTGGAG | 2 cut(s) | 2156, 3043 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 807, 3170, 3202 |
| Bpu14I | TTCGAA | 1 cut(s) | 482 |
| BpuEI | CTTGAG | 3 cut(s) | 842, 3085, 3182 |
| BpuMI | CCSGG | 1 cut(s) | 58 |
| Bsa29I | ATCGAT | 1 cut(s) | 516 |
| BsaAI | YACGTR | 1 cut(s) | 2690 |
| BsaBI | GATNNNNATC | 5 cut(s) | 558, 894, 3961, 4584, 4590 |
| BsaI | GGTCTC | 1 cut(s) | 237 |
| BsaWI | WCCGGW | 5 cut(s) | 1815, 3448, 3721, 4164, 4731 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 390, 1222, 1504, 1549, 2134, 2575, 2751, 3066, 3330 |
| Bse118I | RCCGGY | 1 cut(s) | 2870 |
| Bse1I | ACTGG | 8 cut(s) | 191, 451, 469, 769, 1914, 1943, 2216, 4401 |
| Bse21I | CCTNAGG | 1 cut(s) | 1929 |
| Bse3DI | GCAATG | 4 cut(s) | 2383, 3986, 4310, 4528 |
| Bse8I | GATNNNNATC | 5 cut(s) | 558, 894, 3961, 4584, 4590 |
| BseAI | TCCGGA | 3 cut(s) | 3448, 3721, 4164 |
| BseBI | CCWGG | 9 cut(s) | 749, 1545, 1977, 2747, 3435, 3490, 3631, 3864, 4155 |
| BseCI | ATCGAT | 1 cut(s) | 516 |
| BseJI | GATNNNNATC | 5 cut(s) | 558, 894, 3961, 4584, 4590 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 390, 1222, 1504, 1549, 2134, 2575, 2751, 3066, 3330 |
| BseMI | GCAATG | 4 cut(s) | 2383, 3986, 4310, 4528 |
| BseNI | ACTGG | 8 cut(s) | 191, 451, 469, 769, 1914, 1943, 2216, 4401 |
| BseRI | GAGGAG | 8 cut(s) | 350, 394, 695, 833, 1151, 1471, 2301, 3724 |
| BseSI | GKGCMC | 3 cut(s) | 748, 1975, 3668 |
| BsgI | GTGCAG | 2 cut(s) | 1164, 2636 |
| Bsh1236I | CGCG | 2 cut(s) | 75, 3387 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1061 |
| BshFI | GGCC | 4 cut(s) | 2215, 2981, 4150, 4497 |
| BshNI | GGYRCC | 2 cut(s) | 743, 4674 |
| BshVI | ATCGAT | 1 cut(s) | 516 |
| BsiEI | CGRYCG | 1 cut(s) | 1061 |
| BsiHKAI | GWGCWC | 3 cut(s) | 272, 1975, 3668 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2906, 3763 |
| BsiSI | CCGG | 9 cut(s) | 57, 1816, 1880, 2413, 2871, 3449, 3722, 4165, 4732 |
| BsiWI | CGTACG | 1 cut(s) | 4132 |
| BslFI | GGGAC | 6 cut(s) | 73, 413, 1949, 3283, 4355, 4492 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 390, 1222, 1504, 1549, 2134, 2575, 2751, 3066, 3330 |
| BsmAI | GTCTC | 8 cut(s) | 237, 755, 923, 1353, 2500, 2807, 2909, 3671 |
| BsmFI | GGGAC | 6 cut(s) | 73, 413, 1949, 3283, 4355, 4492 |
| BsnI | GGCC | 4 cut(s) | 2215, 2981, 4150, 4497 |
| Bso31I | GGTCTC | 1 cut(s) | 237 |
| BsoBI | CYCGRG | 2 cut(s) | 2906, 3763 |
| Bsp119I | TTCGAA | 1 cut(s) | 482 |
| Bsp1286I | GDGCHC | 6 cut(s) | 272, 748, 1975, 2311, 3203, 3668 |
| Bsp13I | TCCGGA | 3 cut(s) | 3448, 3721, 4164 |
| Bsp1407I | TGTACA | 2 cut(s) | 2482, 4080 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 807, 3170, 3202 |
| Bsp19I | CCATGG | 1 cut(s) | 3038 |
| Bsp68I | TCGCGA | 1 cut(s) | 75 |
| BspACI | CCGC | 9 cut(s) | 314, 848, 1187, 2030, 2232, 3342, 3500, 4147, 4772 |
| BspANI | GGCC | 4 cut(s) | 2215, 2981, 4150, 4497 |
| BspDI | ATCGAT | 1 cut(s) | 516 |
| BspEI | TCCGGA | 3 cut(s) | 3448, 3721, 4164 |
| BspFNI | CGCG | 2 cut(s) | 75, 3387 |
| BspHI | TCATGA | 5 cut(s) | 907, 1011, 2512, 2544, 4588 |
| BspLI | GGNNCC | 8 cut(s) | 189, 745, 891, 1531, 2310, 4151, 4532, 4676 |
| BspMAI | CTGCAG | 1 cut(s) | 4356 |
| BspPI | GGATC | 7 cut(s) | 28, 884, 897, 1560, 2021, 2476, 4645 |
| BspT104I | TTCGAA | 1 cut(s) | 482 |
| BspT107I | GGYRCC | 2 cut(s) | 743, 4674 |
| BspTNI | GGTCTC | 1 cut(s) | 237 |
| BsrDI | GCAATG | 4 cut(s) | 2383, 3986, 4310, 4528 |
| BsrFI | RCCGGY | 1 cut(s) | 2870 |
| BsrGI | TGTACA | 2 cut(s) | 2482, 4080 |
| BsrI | ACTGG | 8 cut(s) | 191, 451, 469, 769, 1914, 1943, 2216, 4401 |
| BssAI | RCCGGY | 1 cut(s) | 2870 |
| BssSI | CACGAG | 2 cut(s) | 152, 234 |
| BssT1I | CCWWGG | 6 cut(s) | 37, 385, 2402, 3003, 3038, 4566 |
| Bst2BI | CACGAG | 2 cut(s) | 152, 234 |
| Bst2UI | CCWGG | 9 cut(s) | 749, 1545, 1977, 2747, 3435, 3490, 3631, 3864, 4155 |
| Bst6I | CTCTTC | 5 cut(s) | 197, 617, 2673, 3669, 3825 |
| BstAUI | TGTACA | 2 cut(s) | 2482, 4080 |
| BstBAI | YACGTR | 1 cut(s) | 2690 |
| BstBI | TTCGAA | 1 cut(s) | 482 |
| BstDSI | CCRYGG | 2 cut(s) | 3038, 4678 |
| BstEII | GGTNACC | 1 cut(s) | 1430 |
| BstFNI | CGCG | 2 cut(s) | 75, 3387 |
| BstH2I | RGCGCY | 2 cut(s) | 807, 1041 |
| BstHHI | GCGC | 5 cut(s) | 806, 1040, 2009, 2440, 3389 |
| BstMAI | GTCTC | 8 cut(s) | 237, 755, 923, 1353, 2500, 2807, 2909, 3671 |
| BstMCI | CGRYCG | 1 cut(s) | 1061 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 1863, 1993, 2058, 2140, 3494, 3535, 4026, 4336 |
| BstNI | CCWGG | 9 cut(s) | 749, 1545, 1977, 2747, 3435, 3490, 3631, 3864, 4155 |
| BstNSI | RCATGY | 6 cut(s) | 730, 1348, 2536, 3803, 4081, 4343 |
| BstPI | GGTNACC | 1 cut(s) | 1430 |
| BstSFI | CTRYAG | 3 cut(s) | 2047, 2632, 4352 |
| BstSLI | GKGCMC | 3 cut(s) | 748, 1975, 3668 |
| BstSNI | TACGTA | 1 cut(s) | 2690 |
| BstUI | CGCG | 2 cut(s) | 75, 3387 |
| BstV2I | GAAGAC | 4 cut(s) | 1229, 1727, 4244, 4749 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 44 |
| Bsu15I | ATCGAT | 1 cut(s) | 516 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1929 |
| BsuI | GTATCC | 2 cut(s) | 1114, 1465 |
| BsuRI | GGCC | 4 cut(s) | 2215, 2981, 4150, 4497 |
| BsuTUI | ATCGAT | 1 cut(s) | 516 |
| BtgI | CCRYGG | 2 cut(s) | 3038, 4678 |
| BtgZI | GCGATG | 1 cut(s) | 1650 |
| BtrI | CACGTC | 1 cut(s) | 3482 |
| BtsIMutI | CAGTG | 3 cut(s) | 198, 619, 1828 |
| BtuMI | TCGCGA | 1 cut(s) | 75 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1652, 2435, 3464 |
| CciI | TCATGA | 5 cut(s) | 907, 1011, 2512, 2544, 4588 |
| CfoI | GCGC | 5 cut(s) | 806, 1040, 2009, 2440, 3389 |
| Cfr10I | RCCGGY | 1 cut(s) | 2870 |
| Cfr13I | GGNCC | 8 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4149, 4531 |
| ClaI | ATCGAT | 1 cut(s) | 516 |
| CseI | GACGC | 2 cut(s) | 1431, 4195 |
| DraI | TTTAAA | 2 cut(s) | 300, 1785 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 407 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 407 |
| EaeI | YGGCCR | 1 cut(s) | 2979 |
| Eam1104I | CTCTTC | 5 cut(s) | 197, 617, 2673, 3669, 3825 |
| EarI | CTCTTC | 5 cut(s) | 197, 617, 2673, 3669, 3825 |
| Ecl136II | GAGCTC | 1 cut(s) | 270 |
| Eco105I | TACGTA | 1 cut(s) | 2690 |
| Eco130I | CCWWGG | 6 cut(s) | 37, 385, 2402, 3003, 3038, 4566 |
| Eco24I | GRGCYC | 3 cut(s) | 272, 2311, 3203 |
| Eco31I | GGTCTC | 1 cut(s) | 237 |
| Eco32I | GATATC | 4 cut(s) | 2203, 2421, 2446, 2542 |
| Eco47I | GGWCC | 7 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4531 |
| Eco47III | AGCGCT | 2 cut(s) | 805, 1039 |
| Eco53kI | GAGCTC | 1 cut(s) | 270 |
| Eco81I | CCTNAGG | 1 cut(s) | 1929 |
| Eco88I | CYCGRG | 2 cut(s) | 2906, 3763 |
| Eco91I | GGTNACC | 1 cut(s) | 1430 |
| EcoICRI | GAGCTC | 1 cut(s) | 270 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1278, 3909 |
| EcoO65I | GGTNACC | 1 cut(s) | 1430 |
| EcoRI | GAATTC | 7 cut(s) | 181, 319, 478, 2239, 2563, 3454, 4708 |
| EcoRII | CCWGG | 9 cut(s) | 747, 1543, 1975, 2745, 3433, 3488, 3629, 3862, 4153 |
| EcoRV | GATATC | 4 cut(s) | 2203, 2421, 2446, 2542 |
| EcoT14I | CCWWGG | 6 cut(s) | 37, 385, 2402, 3003, 3038, 4566 |
| EcoT22I | ATGCAT | 2 cut(s) | 2261, 2818 |
| EcoT38I | GRGCYC | 3 cut(s) | 272, 2311, 3203 |
| ErhI | CCWWGG | 6 cut(s) | 37, 385, 2402, 3003, 3038, 4566 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 976, 1008, 4592, 4624 |
| FaqI | GGGAC | 6 cut(s) | 73, 413, 1949, 3283, 4355, 4492 |
| FauI | CCCGC | 2 cut(s) | 1194, 3335 |
| FauNDI | CATATG | 3 cut(s) | 2987, 4085, 4776 |
| FbaI | TGATCA | 2 cut(s) | 4585, 4591 |
| FblI | GTMKAC | 2 cut(s) | 3013, 4420 |
| FriOI | GRGCYC | 3 cut(s) | 272, 2311, 3203 |
| GlaI | GCGC | 5 cut(s) | 805, 1039, 2008, 2439, 3388 |
| GsuI | CTGGAG | 2 cut(s) | 2156, 3043 |
| HaeII | RGCGCY | 2 cut(s) | 807, 1041 |
| HaeIII | GGCC | 4 cut(s) | 2215, 2981, 4150, 4497 |
| HapII | CCGG | 9 cut(s) | 57, 1816, 1880, 2413, 2871, 3449, 3722, 4165, 4732 |
| HgaI | GACGC | 2 cut(s) | 1431, 4195 |
| HhaI | GCGC | 5 cut(s) | 806, 1040, 2009, 2440, 3389 |
| Hin6I | GCGC | 5 cut(s) | 804, 1038, 2007, 2438, 3387 |
| HinP1I | GCGC | 5 cut(s) | 804, 1038, 2007, 2438, 3387 |
| HincII | GTYRAC | 3 cut(s) | 2337, 3014, 3292 |
| HindII | GTYRAC | 3 cut(s) | 2337, 3014, 3292 |
| HindIII | AAGCTT | 2 cut(s) | 990, 3103 |
| HpaI | GTTAAC | 1 cut(s) | 3292 |
| HpaII | CCGG | 9 cut(s) | 57, 1816, 1880, 2413, 2871, 3449, 3722, 4165, 4732 |
| Hpy99I | CGWCG | 4 cut(s) | 1743, 3360, 3483, 4320 |
| HpyCH4IV | ACGT | 6 cut(s) | 648, 1475, 1741, 2689, 3481, 4318 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 1863, 1993, 2058, 2140, 3494, 3535, 4026, 4336 |
| HpySE526I | ACGT | 6 cut(s) | 648, 1475, 1741, 2689, 3481, 4318 |
| HspAI | GCGC | 5 cut(s) | 804, 1038, 2007, 2438, 3387 |
| Kpn2I | TCCGGA | 3 cut(s) | 3448, 3721, 4164 |
| KpnI | GGTACC | 1 cut(s) | 4678 |
| Ksp22I | TGATCA | 2 cut(s) | 4585, 4591 |
| KspAI | GTTAAC | 1 cut(s) | 3292 |
| LmnI | GCTCC | 6 cut(s) | 4, 59, 1762, 1854, 2137, 2314 |
| MaeII | ACGT | 6 cut(s) | 648, 1475, 1741, 2689, 3481, 4318 |
| MfeI | CAATTG | 4 cut(s) | 3367, 3648, 4331, 4620 |
| MhlI | GDGCHC | 6 cut(s) | 272, 748, 1975, 2311, 3203, 3668 |
| MlsI | TGGCCA | 1 cut(s) | 2981 |
| MluNI | TGGCCA | 1 cut(s) | 2981 |
| MlyI | GAGTC | 8 cut(s) | 395, 925, 1312, 1468, 2401, 2911, 3470, 3515 |
| MmeI | TCCRAC | 6 cut(s) | 414, 450, 1458, 2517, 3258, 4727 |
| Mox20I | TGGCCA | 1 cut(s) | 2981 |
| Mph1103I | ATGCAT | 2 cut(s) | 2261, 2818 |
| MroI | TCCGGA | 3 cut(s) | 3448, 3721, 4164 |
| MroXI | GAANNNNTTC | 3 cut(s) | 991, 1571, 3078 |
| MscI | TGGCCA | 1 cut(s) | 2981 |
| Msp20I | TGGCCA | 1 cut(s) | 2981 |
| MspA1I | CMGCKG | 3 cut(s) | 1694, 2232, 3500 |
| MspI | CCGG | 9 cut(s) | 57, 1816, 1880, 2413, 2871, 3449, 3722, 4165, 4732 |
| MunI | CAATTG | 4 cut(s) | 3367, 3648, 4331, 4620 |
| MvaI | CCWGG | 9 cut(s) | 749, 1545, 1977, 2747, 3435, 3490, 3631, 3864, 4155 |
| MvnI | CGCG | 2 cut(s) | 75, 3387 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 1863, 1993, 2058, 2140, 3494, 3535, 4026, 4336 |
| NciI | CCSGG | 1 cut(s) | 58 |
| NcoI | CCATGG | 1 cut(s) | 3038 |
| NdeI | CATATG | 3 cut(s) | 2987, 4085, 4776 |
| NlaIV | GGNNCC | 8 cut(s) | 189, 745, 891, 1531, 2310, 4151, 4532, 4676 |
| NmeAIII | GCCGAG | 1 cut(s) | 1540 |
| NmuCI | GTSAC | 9 cut(s) | 409, 536, 1430, 1823, 1916, 2113, 2385, 2694, 4604 |
| NruI | TCGCGA | 1 cut(s) | 75 |
| NsiI | ATGCAT | 2 cut(s) | 2261, 2818 |
| NspI | RCATGY | 6 cut(s) | 730, 1348, 2536, 3803, 4081, 4343 |
| NspV | TTCGAA | 1 cut(s) | 482 |
| OliI | CACNNNNGTG | 3 cut(s) | 1733, 3163, 4611 |
| PaeR7I | CTCGAG | 1 cut(s) | 3763 |
| PagI | TCATGA | 5 cut(s) | 907, 1011, 2512, 2544, 4588 |
| PasI | CCCWGGG | 1 cut(s) | 4154 |
| PciI | ACATGT | 1 cut(s) | 3799 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1747, 3186 |
| PdmI | GAANNNNTTC | 3 cut(s) | 991, 1571, 3078 |
| Pfl23II | CGTACG | 1 cut(s) | 4132 |
| PflFI | GACNNNGTC | 1 cut(s) | 430 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 2575, 3066, 3330 |
| PfoI | TCCNGGA | 2 cut(s) | 56, 3433 |
| Ple19I | CGATCG | 1 cut(s) | 1061 |
| PleI | GAGTC | 8 cut(s) | 395, 925, 1311, 1467, 2401, 2910, 3469, 3514 |
| PpsI | GAGTC | 8 cut(s) | 395, 925, 1311, 1467, 2401, 2910, 3469, 3514 |
| Ppu21I | YACGTR | 1 cut(s) | 2690 |
| PpuMI | RGGWCCY | 2 cut(s) | 1278, 3909 |
| PscI | ACATGT | 1 cut(s) | 3799 |
| Psp124BI | GAGCTC | 1 cut(s) | 272 |
| Psp5II | RGGWCCY | 2 cut(s) | 1278, 3909 |
| Psp6I | CCWGG | 9 cut(s) | 747, 1543, 1975, 2745, 3433, 3488, 3629, 3862, 4153 |
| PspEI | GGTNACC | 1 cut(s) | 1430 |
| PspGI | CCWGG | 9 cut(s) | 747, 1543, 1975, 2745, 3433, 3488, 3629, 3862, 4153 |
| PspLI | CGTACG | 1 cut(s) | 4132 |
| PspN4I | GGNNCC | 8 cut(s) | 189, 745, 891, 1531, 2310, 4151, 4532, 4676 |
| PspPI | GGNCC | 8 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4149, 4531 |
| PspPPI | RGGWCCY | 2 cut(s) | 1278, 3909 |
| PspXI | VCTCGAGB | 1 cut(s) | 3763 |
| PstI | CTGCAG | 1 cut(s) | 4356 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1652, 2435, 3464 |
| PsyI | GACNNNGTC | 1 cut(s) | 430 |
| PvuI | CGATCG | 1 cut(s) | 1061 |
| PvuII | CAGCTG | 1 cut(s) | 1694 |
| RruI | TCGCGA | 1 cut(s) | 75 |
| SacI | GAGCTC | 1 cut(s) | 272 |
| SalI | GTCGAC | 1 cut(s) | 3012 |
| Sau96I | GGNCC | 8 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4149, 4531 |
| ScaI | AGTACT | 2 cut(s) | 1075, 1288 |
| SchI | GAGTC | 8 cut(s) | 395, 925, 1312, 1468, 2401, 2911, 3470, 3515 |
| SduI | GDGCHC | 6 cut(s) | 272, 748, 1975, 2311, 3203, 3668 |
| SfcI | CTRYAG | 3 cut(s) | 2047, 2632, 4352 |
| Sfr274I | CTCGAG | 1 cut(s) | 3763 |
| SfuI | TTCGAA | 1 cut(s) | 482 |
| SinI | GGWCC | 7 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4531 |
| SlaI | CTCGAG | 1 cut(s) | 3763 |
| SmiI | ATTTAAAT | 1 cut(s) | 300 |
| SmlI | CTYRAG | 4 cut(s) | 857, 3100, 3161, 3763 |
| SmoI | CTYRAG | 4 cut(s) | 857, 3100, 3161, 3763 |
| SnaBI | TACGTA | 1 cut(s) | 2690 |
| SsiI | CCGC | 9 cut(s) | 314, 848, 1187, 2030, 2232, 3342, 3500, 4147, 4772 |
| SspI | AATATT | 6 cut(s) | 757, 1174, 1395, 3430, 3441, 3718 |
| SstI | GAGCTC | 1 cut(s) | 272 |
| StyI | CCWWGG | 6 cut(s) | 37, 385, 2402, 3003, 3038, 4566 |
| SwaI | ATTTAAAT | 1 cut(s) | 300 |
| TaiI | ACGT | 6 cut(s) | 651, 1478, 1744, 2692, 3484, 4321 |
| TaqII | GACCGA | 1 cut(s) | 1895 |
| TatI | WGTACW | 7 cut(s) | 684, 1073, 1243, 1286, 2482, 3151, 4080 |
| TauI | GCSGC | 1 cut(s) | 4150 |
| TscAI | CASTG | 3 cut(s) | 198, 619, 1828 |
| TseFI | GTSAC | 9 cut(s) | 409, 536, 1430, 1823, 1916, 2113, 2385, 2694, 4604 |
| Tsp45I | GTSAC | 9 cut(s) | 409, 536, 1430, 1823, 1916, 2113, 2385, 2694, 4604 |
| TspRI | CASTG | 3 cut(s) | 198, 619, 1828 |
| Tth111I | GACNNNGTC | 1 cut(s) | 430 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 2575, 3066, 3330 |
| VneI | GTGCAC | 2 cut(s) | 1971, 3664 |
| VpaK11BI | GGWCC | 7 cut(s) | 371, 1278, 1530, 2399, 3035, 3909, 4531 |
| XbaI | TCTAGA | 1 cut(s) | 3127 |
| XceI | RCATGY | 6 cut(s) | 730, 1348, 2536, 3803, 4081, 4343 |
| XhoI | CTCGAG | 1 cut(s) | 3763 |
| XmaJI | CCTAGG | 2 cut(s) | 385, 2402 |
| XmiI | GTMKAC | 2 cut(s) | 3013, 4420 |
| XmnI | GAANNNNTTC | 3 cut(s) | 991, 1571, 3078 |
| ZrmI | AGTACT | 2 cut(s) | 1075, 1288 |
| Zsp2I | ATGCAT | 2 cut(s) | 2261, 2818 |