DDT domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12400 |
| fragaria_vesca | FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 FvH4_3g28290 |
| malus_domestica | MD03G1169900.v1.1 MD11G1187100.v1.1 |
| prunus_persica | Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 Prupe.4G257200_v2.0.a1 |
| pyrus_communis | pycom03g12620 pycom11g16390 pycom11g16400 |
| rosa_chinensis | RchiOBHm_Chr5g0051171 |
| rosa_laevigata | RLG00000034759 |
| rosa_multiflora | Rmu_co8421621.1_g000001 Rmu_sc0000446.1_g000011 Rmu_sc0020509.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00029270 Rroxscaffold_1G00029280 |
| rosa_rugosa | Rorug05G0266200 |
| rosa_samantha | Rh5AG338600 Rh5BG348500 Rh5CG375600 Rh5DG361400 |
| rosa_wichuraiana | Rw0G023670 Rw5G031980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 4668 |
| Acc36I | ACCTGC | 3 cut(s) | 1798, 2650, 3655 |
| AccB1I | GGYRCC | 1 cut(s) | 4839 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2007 |
| AccBSI | CCGCTC | 1 cut(s) | 2439 |
| AccII | CGCG | 2 cut(s) | 2582, 2821 |
| AclWI | GGATC | 3 cut(s) | 1283, 1708, 2213 |
| AcoI | YGGCCR | 5 cut(s) | 1521, 1685, 2434, 2785, 3097 |
| AfaI | GTAC | 9 cut(s) | 74, 978, 1234, 2445, 2627, 4148, 4299, 4425, 4959 |
| AflII | CTTAAG | 1 cut(s) | 3212 |
| AflIII | ACRYGT | 4 cut(s) | 2819, 3304, 4526, 4845 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2589 |
| AjnI | CCWGG | 4 cut(s) | 896, 1735, 4034, 4178 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 270, 302 |
| AleI | CACNNNNGTG | 1 cut(s) | 1531 |
| Alw26I | GTCTC | 6 cut(s) | 887, 1168, 1208, 1349, 1658, 2486 |
| AlwI | GGATC | 3 cut(s) | 1283, 1708, 2213 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 664, 1387, 4421, 4590 |
| ApaI | GGGCCC | 1 cut(s) | 3167 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1886, 1918 |
| AseI | ATTAAT | 1 cut(s) | 1866 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 32, 295 |
| AspA2I | CCTAGG | 2 cut(s) | 208, 4442 |
| AspLEI | GCGC | 1 cut(s) | 4669 |
| AspS9I | GGNCC | 8 cut(s) | 1142, 2924, 3035, 3163, 3164, 3393, 4032, 4194 |
| AsuC2I | CCSGG | 1 cut(s) | 2923 |
| AsuHPI | GGTGA | 6 cut(s) | 179, 659, 788, 1533, 2138, 4674 |
| AvaII | GGWCC | 1 cut(s) | 1142 |
| AvrII | CCTAGG | 2 cut(s) | 208, 4442 |
| AxyI | CCTNAGG | 1 cut(s) | 1380 |
| BaeGI | GKGCMC | 1 cut(s) | 3167 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1802, 1835 |
| BalI | TGGCCA | 2 cut(s) | 1687, 2787 |
| BanI | GGYRCC | 1 cut(s) | 4839 |
| BanII | GRGCYC | 3 cut(s) | 1499, 3167, 3417 |
| BauI | CACGAG | 1 cut(s) | 2223 |
| BbsI | GAAGAC | 5 cut(s) | 361, 2337, 2897, 3200, 4595 |
| BbvCI | CCTCAGC | 2 cut(s) | 141, 4788 |
| BceAI | ACGGC | 3 cut(s) | 1149, 3112, 4181 |
| BciT130I | CCWGG | 4 cut(s) | 898, 1737, 4036, 4180 |
| BciVI | GTATCC | 1 cut(s) | 760 |
| BclI | TGATCA | 1 cut(s) | 4696 |
| BcnI | CCSGG | 1 cut(s) | 2923 |
| BcoDI | GTCTC | 6 cut(s) | 887, 1168, 1208, 1349, 1658, 2486 |
| BfmI | CTRYAG | 4 cut(s) | 1209, 1305, 2305, 3146 |
| BfrI | CTTAAG | 1 cut(s) | 3212 |
| BfuAI | ACCTGC | 3 cut(s) | 1798, 2650, 3655 |
| BfuI | GTATCC | 1 cut(s) | 760 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 210 |
| BglII | AGATCT | 1 cut(s) | 4079 |
| BlnI | CCTAGG | 2 cut(s) | 208, 4442 |
| BlpI | GCTNAGC | 1 cut(s) | 1887 |
| BmcAI | AGTACT | 2 cut(s) | 1234, 4148 |
| Bme1390I | CCNGG | 5 cut(s) | 898, 1737, 2923, 4036, 4180 |
| Bme18I | GGWCC | 1 cut(s) | 1142 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2589 |
| BmgT120I | GGNCC | 8 cut(s) | 1142, 2924, 3035, 3163, 3164, 3393, 4032, 4194 |
| BmrFI | CCNGG | 5 cut(s) | 898, 1737, 2923, 4036, 4180 |
| BmrI | ACTGGG | 3 cut(s) | 2401, 3569, 4903 |
| BmsI | GCATC | 9 cut(s) | 628, 2941, 3227, 3280, 3644, 3946, 4220, 4427, 4921 |
| BmuI | ACTGGG | 3 cut(s) | 2401, 3569, 4903 |
| BpiI | GAAGAC | 5 cut(s) | 361, 2337, 2897, 3200, 4595 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1219, 1251 |
| BpmI | CTGGAG | 3 cut(s) | 1409, 4395, 4956 |
| Bpu10I | CCTNAGC | 3 cut(s) | 141, 2339, 4788 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1887 |
| BpuMI | CCSGG | 1 cut(s) | 2923 |
| BsaAI | YACGTR | 2 cut(s) | 1683, 3359 |
| BsaI | GGTCTC | 1 cut(s) | 887 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1376, 1406, 3454, 3484, 3705, 3735, 4281, 4311 |
| Bse21I | CCTNAGG | 1 cut(s) | 1380 |
| Bse3DI | GCAATG | 3 cut(s) | 4102, 4340, 4463 |
| BseBI | CCWGG | 4 cut(s) | 898, 1737, 4036, 4180 |
| BseGI | GGATG | 8 cut(s) | 566, 643, 2047, 2178, 2548, 3052, 3922, 4682 |
| BseMI | GCAATG | 3 cut(s) | 4102, 4340, 4463 |
| BseRI | GAGGAG | 6 cut(s) | 730, 859, 1240, 1663, 2825, 3971 |
| BseSI | GKGCMC | 1 cut(s) | 3167 |
| BseYI | CCCAGC | 2 cut(s) | 3542, 4190 |
| BsgI | GTGCAG | 1 cut(s) | 2220 |
| Bsh1236I | CGCG | 2 cut(s) | 2582, 2821 |
| BshNI | GGYRCC | 1 cut(s) | 4839 |
| BsiSI | CCGG | 1 cut(s) | 2922 |
| BslFI | GGGAC | 7 cut(s) | 381, 789, 1740, 2747, 3165, 4891, 4955 |
| BsmAI | GTCTC | 6 cut(s) | 887, 1168, 1208, 1349, 1658, 2486 |
| BsmBI | CGTCTC | 1 cut(s) | 1168 |
| BsmFI | GGGAC | 7 cut(s) | 381, 789, 1740, 2747, 3165, 4891, 4955 |
| BsmI | GAATGC | 3 cut(s) | 541, 2027, 4669 |
| Bso31I | GGTCTC | 1 cut(s) | 887 |
| Bsp120I | GGGCCC | 1 cut(s) | 3163 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1499, 3167, 3417 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1887 |
| Bsp19I | CCATGG | 3 cut(s) | 703, 1717, 3324 |
| BspFNI | CGCG | 2 cut(s) | 2582, 2821 |
| BspHI | TCATGA | 2 cut(s) | 3024, 3136 |
| BspMAI | CTGCAG | 2 cut(s) | 1309, 3150 |
| BspMI | ACCTGC | 3 cut(s) | 1798, 2650, 3655 |
| BspPI | GGATC | 3 cut(s) | 1283, 1708, 2213 |
| BspT107I | GGYRCC | 1 cut(s) | 4839 |
| BspTI | CTTAAG | 1 cut(s) | 3212 |
| BspTNI | GGTCTC | 1 cut(s) | 887 |
| BsrBI | CCGCTC | 1 cut(s) | 2439 |
| BsrDI | GCAATG | 3 cut(s) | 4102, 4340, 4463 |
| BssSI | CACGAG | 1 cut(s) | 2223 |
| BssT1I | CCWWGG | 8 cut(s) | 157, 208, 703, 1717, 2168, 3324, 3525, 4442 |
| Bst2BI | CACGAG | 1 cut(s) | 2223 |
| Bst2UI | CCWGG | 4 cut(s) | 898, 1737, 4036, 4180 |
| Bst6I | CTCTTC | 6 cut(s) | 780, 1306, 1347, 2859, 3832, 4559 |
| BstAFI | CTTAAG | 1 cut(s) | 3212 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1313 |
| BstBAI | YACGTR | 2 cut(s) | 1683, 3359 |
| BstC8I | GCNNGC | 8 cut(s) | 1611, 3146, 3621, 3657, 3973, 4176, 4460, 4635 |
| BstDSI | CCRYGG | 4 cut(s) | 703, 1717, 1950, 3324 |
| BstEII | GGTNACC | 2 cut(s) | 697, 2252 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 182 |
| BstF5I | GGATG | 8 cut(s) | 566, 643, 2047, 2178, 2548, 3052, 3922, 4682 |
| BstFNI | CGCG | 2 cut(s) | 2582, 2821 |
| BstHHI | GCGC | 1 cut(s) | 4669 |
| BstMAI | GTCTC | 6 cut(s) | 887, 1168, 1208, 1349, 1658, 2486 |
| BstNI | CCWGG | 4 cut(s) | 898, 1737, 4036, 4180 |
| BstNSI | RCATGY | 6 cut(s) | 3308, 4178, 4224, 4530, 4849, 4995 |
| BstPI | GGTNACC | 2 cut(s) | 697, 2252 |
| BstSCI | CCNGG | 5 cut(s) | 896, 1735, 2921, 4034, 4178 |
| BstSFI | CTRYAG | 4 cut(s) | 1209, 1305, 2305, 3146 |
| BstSLI | GKGCMC | 1 cut(s) | 3167 |
| BstUI | CGCG | 2 cut(s) | 2582, 2821 |
| BstV2I | GAAGAC | 5 cut(s) | 361, 2337, 2897, 3200, 4595 |
| BstX2I | RGATCY | 1 cut(s) | 4079 |
| BstYI | RGATCY | 1 cut(s) | 4079 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1380 |
| BsuI | GTATCC | 1 cut(s) | 760 |
| BtgI | CCRYGG | 4 cut(s) | 703, 1717, 1950, 3324 |
| BtsCI | GGATG | 8 cut(s) | 566, 643, 2047, 2178, 2548, 3052, 3922, 4682 |
| BveI | ACCTGC | 3 cut(s) | 1798, 2650, 3655 |
| Cac8I | GCNNGC | 8 cut(s) | 1611, 3146, 3621, 3657, 3973, 4176, 4460, 4635 |
| CaiI | CAGNNNCTG | 4 cut(s) | 664, 1387, 4421, 4590 |
| CciI | TCATGA | 2 cut(s) | 3024, 3136 |
| CfoI | GCGC | 1 cut(s) | 4669 |
| Cfr13I | GGNCC | 8 cut(s) | 1142, 2924, 3035, 3163, 3164, 3393, 4032, 4194 |
| CseI | GACGC | 1 cut(s) | 2827 |
| CsiI | ACCWGGT | 1 cut(s) | 1735 |
| Csp6I | GTAC | 9 cut(s) | 73, 977, 1233, 2444, 2626, 4147, 4298, 4424, 4958 |
| CviQI | GTAC | 9 cut(s) | 73, 977, 1233, 2444, 2626, 4147, 4298, 4424, 4958 |
| DraI | TTTAAA | 5 cut(s) | 1416, 2242, 2655, 2901, 4746 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2589 |
| EaeI | YGGCCR | 5 cut(s) | 1521, 1685, 2434, 2785, 3097 |
| Eam1104I | CTCTTC | 6 cut(s) | 780, 1306, 1347, 2859, 3832, 4559 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2589 |
| EarI | CTCTTC | 6 cut(s) | 780, 1306, 1347, 2859, 3832, 4559 |
| Eco130I | CCWWGG | 8 cut(s) | 157, 208, 703, 1717, 2168, 3324, 3525, 4442 |
| Eco24I | GRGCYC | 3 cut(s) | 1499, 3167, 3417 |
| Eco31I | GGTCTC | 1 cut(s) | 887 |
| Eco47I | GGWCC | 1 cut(s) | 1142 |
| Eco81I | CCTNAGG | 1 cut(s) | 1380 |
| Eco91I | GGTNACC | 2 cut(s) | 697, 2252 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 182 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3035 |
| EcoO65I | GGTNACC | 2 cut(s) | 697, 2252 |
| EcoRI | GAATTC | 4 cut(s) | 1428, 2521, 3709, 4318 |
| EcoRII | CCWGG | 4 cut(s) | 896, 1735, 4034, 4178 |
| EcoT14I | CCWWGG | 8 cut(s) | 157, 208, 703, 1717, 2168, 3324, 3525, 4442 |
| EcoT38I | GRGCYC | 3 cut(s) | 1499, 3167, 3417 |
| ErhI | CCWWGG | 8 cut(s) | 157, 208, 703, 1717, 2168, 3324, 3525, 4442 |
| Esp3I | CGTCTC | 1 cut(s) | 1168 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1083, 1115, 2722, 2754 |
| FaqI | GGGAC | 7 cut(s) | 381, 789, 1740, 2747, 3165, 4891, 4955 |
| FauI | CCCGC | 2 cut(s) | 3980, 4980 |
| FbaI | TGATCA | 1 cut(s) | 4696 |
| FokI | GGATG | 8 cut(s) | 573, 650, 2054, 2185, 2555, 3059, 3929, 4689 |
| FriOI | GRGCYC | 3 cut(s) | 1499, 3167, 3417 |
| FspI | TGCGCA | 1 cut(s) | 4668 |
| GlaI | GCGC | 1 cut(s) | 4668 |
| GsaI | CCCAGC | 2 cut(s) | 3546, 4194 |
| GsuI | CTGGAG | 3 cut(s) | 1409, 4395, 4956 |
| HapII | CCGG | 1 cut(s) | 2922 |
| HgaI | GACGC | 1 cut(s) | 2827 |
| HhaI | GCGC | 1 cut(s) | 4669 |
| Hin6I | GCGC | 1 cut(s) | 4667 |
| HinP1I | GCGC | 1 cut(s) | 4667 |
| HincII | GTYRAC | 3 cut(s) | 2817, 3811, 4942 |
| HindII | GTYRAC | 3 cut(s) | 2817, 3811, 4942 |
| HindIII | AAGCTT | 2 cut(s) | 4365, 4823 |
| HpaI | GTTAAC | 1 cut(s) | 3811 |
| HpaII | CCGG | 1 cut(s) | 2922 |
| HphI | GGTGA | 6 cut(s) | 179, 659, 788, 1533, 2138, 4674 |
| Hpy166II | GTNNAC | 5 cut(s) | 2817, 3811, 4100, 4682, 4942 |
| Hpy8I | GTNNAC | 5 cut(s) | 2817, 3811, 4100, 4682, 4942 |
| Hpy99I | CGWCG | 3 cut(s) | 234, 4437, 4525 |
| HpyCH4IV | ACGT | 5 cut(s) | 1682, 3358, 3728, 4432, 4736 |
| HpySE526I | ACGT | 5 cut(s) | 1682, 3358, 3728, 4432, 4736 |
| HspAI | GCGC | 1 cut(s) | 4667 |
| Ksp22I | TGATCA | 1 cut(s) | 4696 |
| KspAI | GTTAAC | 1 cut(s) | 3811 |
| LmnI | GCTCC | 6 cut(s) | 159, 846, 1384, 1951, 2417, 2998 |
| LweI | GCATC | 9 cut(s) | 628, 2941, 3227, 3280, 3644, 3946, 4220, 4427, 4921 |
| MabI | ACCWGGT | 1 cut(s) | 1735 |
| MaeII | ACGT | 5 cut(s) | 1682, 3358, 3728, 4432, 4736 |
| MbiI | CCGCTC | 1 cut(s) | 2439 |
| MfeI | CAATTG | 3 cut(s) | 1657, 2151, 4996 |
| MflI | RGATCY | 1 cut(s) | 4079 |
| MhlI | GDGCHC | 3 cut(s) | 1499, 3167, 3417 |
| MlsI | TGGCCA | 2 cut(s) | 1687, 2787 |
| MluI | ACGCGT | 1 cut(s) | 2819 |
| MluNI | TGGCCA | 2 cut(s) | 1687, 2787 |
| MlyI | GAGTC | 1 cut(s) | 1660 |
| MmeI | TCCRAC | 7 cut(s) | 1488, 1839, 2077, 3237, 3476, 3711, 4810 |
| Mox20I | TGGCCA | 2 cut(s) | 1687, 2787 |
| MroXI | GAANNNNTTC | 2 cut(s) | 32, 295 |
| MscI | TGGCCA | 2 cut(s) | 1687, 2787 |
| MslI | CAYNNNNRTG | 6 cut(s) | 1118, 1531, 3029, 3105, 4095, 4309 |
| Msp20I | TGGCCA | 2 cut(s) | 1687, 2787 |
| MspA1I | CMGCKG | 3 cut(s) | 971, 1008, 1886 |
| MspCI | CTTAAG | 1 cut(s) | 3212 |
| MspI | CCGG | 1 cut(s) | 2922 |
| MspR9I | CCNGG | 5 cut(s) | 898, 1737, 2923, 4036, 4180 |
| MunI | CAATTG | 3 cut(s) | 1657, 2151, 4996 |
| Mva1269I | GAATGC | 3 cut(s) | 541, 2027, 4669 |
| MvaI | CCWGG | 4 cut(s) | 898, 1737, 4036, 4180 |
| MvnI | CGCG | 2 cut(s) | 2582, 2821 |
| NciI | CCSGG | 1 cut(s) | 2923 |
| NcoI | CCATGG | 3 cut(s) | 703, 1717, 3324 |
| NmeAIII | GCCGAG | 1 cut(s) | 225 |
| NsbI | TGCGCA | 1 cut(s) | 4668 |
| NspI | RCATGY | 6 cut(s) | 3308, 4178, 4224, 4530, 4849, 4995 |
| OliI | CACNNNNGTG | 1 cut(s) | 1531 |
| PaeI | GCATGC | 1 cut(s) | 4178 |
| PagI | TCATGA | 2 cut(s) | 3024, 3136 |
| PasI | CCCWGGG | 1 cut(s) | 4035 |
| PciI | ACATGT | 3 cut(s) | 3304, 4526, 4845 |
| PctI | GAATGC | 3 cut(s) | 541, 2027, 4669 |
| PdmI | GAANNNNTTC | 2 cut(s) | 32, 295 |
| PflFI | GACNNNGTC | 1 cut(s) | 3854 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2007 |
| PleI | GAGTC | 1 cut(s) | 1659 |
| PpsI | GAGTC | 1 cut(s) | 1659 |
| Ppu21I | YACGTR | 2 cut(s) | 1683, 3359 |
| PscI | ACATGT | 3 cut(s) | 3304, 4526, 4845 |
| PshBI | ATTAAT | 1 cut(s) | 1866 |
| Psp6I | CCWGG | 4 cut(s) | 896, 1735, 4034, 4178 |
| PspEI | GGTNACC | 2 cut(s) | 697, 2252 |
| PspFI | CCCAGC | 2 cut(s) | 3542, 4190 |
| PspGI | CCWGG | 4 cut(s) | 896, 1735, 4034, 4178 |
| PspOMI | GGGCCC | 1 cut(s) | 3163 |
| PspPI | GGNCC | 8 cut(s) | 1142, 2924, 3035, 3163, 3164, 3393, 4032, 4194 |
| PstI | CTGCAG | 2 cut(s) | 1309, 3150 |
| PstNI | CAGNNNCTG | 4 cut(s) | 664, 1387, 4421, 4590 |
| PsuI | RGATCY | 1 cut(s) | 4079 |
| PsyI | GACNNNGTC | 1 cut(s) | 3854 |
| PvuII | CAGCTG | 1 cut(s) | 1886 |
| RsaI | GTAC | 9 cut(s) | 74, 978, 1234, 2445, 2627, 4148, 4299, 4425, 4959 |
| RsaNI | GTAC | 9 cut(s) | 73, 977, 1233, 2444, 2626, 4147, 4298, 4424, 4958 |
| RseI | CAYNNNNRTG | 6 cut(s) | 1118, 1531, 3029, 3105, 4095, 4309 |
| Sau96I | GGNCC | 8 cut(s) | 1142, 2924, 3035, 3163, 3164, 3393, 4032, 4194 |
| SbfI | CCTGCAGG | 1 cut(s) | 3150 |
| ScaI | AGTACT | 2 cut(s) | 1234, 4148 |
| SchI | GAGTC | 1 cut(s) | 1660 |
| ScrFI | CCNGG | 5 cut(s) | 898, 1737, 2923, 4036, 4180 |
| SdaI | CCTGCAGG | 1 cut(s) | 3150 |
| SduI | GDGCHC | 3 cut(s) | 1499, 3167, 3417 |
| SexAI | ACCWGGT | 1 cut(s) | 1735 |
| SfaNI | GCATC | 9 cut(s) | 628, 2941, 3227, 3280, 3644, 3946, 4220, 4427, 4921 |
| SfcI | CTRYAG | 4 cut(s) | 1209, 1305, 2305, 3146 |
| SinI | GGWCC | 1 cut(s) | 1142 |
| SmiI | ATTTAAAT | 1 cut(s) | 1416 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 1118, 1531, 3029, 3105, 4095, 4309 |
| SmlI | CTYRAG | 1 cut(s) | 3212 |
| SmoI | CTYRAG | 1 cut(s) | 3212 |
| SphI | GCATGC | 1 cut(s) | 4178 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3150 |
| SspI | AATATT | 1 cut(s) | 2533 |
| StyD4I | CCNGG | 5 cut(s) | 896, 1735, 2921, 4034, 4178 |
| StyI | CCWWGG | 8 cut(s) | 157, 208, 703, 1717, 2168, 3324, 3525, 4442 |
| SwaI | ATTTAAAT | 1 cut(s) | 1416 |
| TaiI | ACGT | 5 cut(s) | 1685, 3361, 3731, 4435, 4739 |
| TaqI | TCGA | 8 cut(s) | 96, 256, 873, 1557, 1909, 2194, 3080, 3638 |
| TatI | WGTACW | 3 cut(s) | 1232, 4146, 4297 |
| TauI | GCSGC | 4 cut(s) | 207, 971, 1526, 2439 |
| TspGWI | ACGGA | 1 cut(s) | 3598 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3854 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2007 |
| Vha464I | CTTAAG | 1 cut(s) | 3212 |
| VpaK11BI | GGWCC | 1 cut(s) | 1142 |
| VspI | ATTAAT | 1 cut(s) | 1866 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 182 |
| XbaI | TCTAGA | 4 cut(s) | 1420, 2947, 3743, 4613 |
| XceI | RCATGY | 6 cut(s) | 3308, 4178, 4224, 4530, 4849, 4995 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2127 |
| XmaJI | CCTAGG | 2 cut(s) | 208, 4442 |
| XmnI | GAANNNNTTC | 2 cut(s) | 32, 295 |
| ZrmI | AGTACT | 2 cut(s) | 1234, 4148 |