Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0008303

Physical Location & Seq

Genomic Coordinates Reverse (-)

4255547 .. 4262568

Gene Structure 7022 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G13300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGCATTTCACTAAGCTTGATGACTCTCCCATGTTCCGCAAACAGTTACAAAGCATGGAGGAGAGCGCAGAAATATTGCGGGAAAGAAGTCTCAAGTTTTACAAAGGATGCCGGAAATACACTGAAGGACTAGGCGAGGCATACGATGGGGACATTGCTTTCGCAAGTGCACTTGAAACATTTGGTGGAGGCCATAATGATCCAATAAGTGTGGCTTTTGGAGGACCGGTAATGACGAAATTTACAATTGCGTTGAGGGAAATTGGGACTTATAAGGAAGTTCTTCGGTCACAGGTGGAACATATACTGAATGACAGATTACTTCAGTTTGCCAATATGGACTTGCATGAAGTTAAGGAAGCTCGGAAGCGCTTTGACAAGGCTAGCCTTACCTACGATCAGGCCCGTGAGAAGTTTTTATCTTTGAGGAAAGGTACAAAAAGTGACGTTGCTGCTGCTTTAGAACAGGAACTTCATACTTCGAGGTCTATGTTTGAGCAAGCTCGGTTCAACCTTGTGACTGCTCTATCAAATGTTGAAGCTAAGAAAAGGTTTGAATTTTTGGAAGCAGTCAGTGGAACAATGGATGCACATCTTCGGTACTTCAAACAGGGTTACGAATTACTGCATCAGATGGAACCATATATCAATCAGGTCTTGACATATGCGCAACAATCCAGAGAAAGATCAAATTATGAACAAGCAGCACTTAATGAAAAGATGCAGGAGTACAAAAGACAGGTTGATCGAGAGAGCAGGTGGGGTTCAAATGGTTCTAATGGATCACCAAATGGAGATGGCATACAAGCAATCGGTAGAAGCTCTCACAAAATGATAGACGCCGTAATGCAATCTGCTGCAAGAGGAAAGGTGCAAACAATAAGGCAAGGTTATCTCTCTAAACGATCTTCAAACCTGAGAGGAGACTGGAAAAGAAGGTTTTTTGTTCTTGACAGCCGGGGAATGCTCTATTATTACCGAAAACAGTGTAGCAAACCATCTGGGTCTGGAAGCCAGCTTTCTGGACAGAGAAATAGCTCCGAGCTTGGGTCTGGACTGCTTAGTAGGTGGCTTTCTTCGAATAATCATGGACATGGTGGTGTCCATGATGAGAAGTCTGTAGCTCGTCATACAGTGAACTTACTCACCTCAACAATTAAAGTCGACGCTGATCAATCAGATCTGAGGTTTTGCTTTAGGATCATATCACCTACAAAAAACTACACGTTGCAGGCTGAGAGTGCACTCGATCAAATGGATTGGATAGAAAAGATCACTGGGGTTATTGCATCACTACTTAGTTCTCAGGTCCCTGAACAGCGTCTTCCTGGTAGTCCCATGGGAAGTGGCCACCATCGATCTGCTAGTGAAAGTAGCTCATATGAAAGTTCTGAATATGATCATCCTACTACTGAAGAATTTGTATGTGAGAGGAGCTTTTTGGGGTACAATGAAAGGCCATCAAGAAGTTTTCAGCCGCAACGGTCCATTAGAAAGGGTGAGAAGCCCATTGATGCTCTTCGAAAGGTCTGTGGGAATGACAAATGTGCGGATTGTGGAGCTCCAGAACCAGACTGGGCTTCTTTAAATCTGGGGGTTCTTGTCTGTATCGAATGTTCTGGTGTTCACCGTAATCTTGGTGTGCATATATCTAAGGTTAGGTCACTCACTCTCGACGTGAAAGTATGGGAGCCATCTGTTATAAGTTTGTTCCAAGCTCTTGGAAATACTTTCGCAAACACAGTTTGGGAGGAATTGCTTCATTCAAGGAGCGCCATCCATTTTGACCCCGGCTTAACAGTGTCTGATAAATCCAGGGTGATGGTCACTGGAAAACCCAGCTATGCTGATATGATATCTATCAAGGAGAAGTATATACAAGCTAAGTATGCGGAGAAGTTATTTGTTCGGAGATCAAGAGACAGCGATTTCCCACAATCAGCTGCACAACAAATGTGGGACGCAGTGAGTGGCAATGATAAAAAAGCTGTTTACCGGCTCATTGTCAATGGTGATGCGGATGTGAATTATGTGTATGACCAAACTTCCAGTTCTTCGTTAACACTTTCCAGAGTAATATTAGTACCAGAAAGGCCAAAGCGTGAGGATGTTCTACTCAGATTAAGAAATGAGTTACTTGATAGAACAGGTAGTTCTTCAAATATATCTCCTGAGGGAAGCGGAGGTTCCTCTCTGCTTCACTGTGCTTGTGAGAAGGCAGACCTTGGGATGGTAGAGCTTTTGCTGCAGTATGGTGCAAATGTAAACGCCTCAGATTCAAGTGGTCAAACGCCGCTGCACTGTTGTCTTCTCAGAGGAAAAGTGACAATAGCAAGATTGCTTCTCACTAGGGGAGCAGACCCGGAAGCTATGAACAGAGAAGGCAAAACCGCTCTTGATATTGCTGCAGAGTCAAATTTTACTGATCCAGAAGTTCTTGCTCTCCTTTCAGACACAAATGGATACAATCACAGACAGTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007275 GO:0007389 GO:0008047 GO:0008150 GO:0008289 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010087 GO:0012505 GO:0016020 GO:0016192 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030234 GO:0030695 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035091 GO:0042221 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050790 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097708 GO:0098657 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Ank_2 Ank_4 Ank_5 ArfGap BAR_3 PH

Protein Analysis

827

Amino Acids

92.52

Weight (kDa)

8.35

Isoelectric Point (pI)

51.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAR_3	PF16746	6 - 235	1.5e-39	BAR domain of APPL family
BAR	PF03114	15 - 216	2.7e-13	BAR domain
PH	PF00169	294 - 429	4e-12	PH domain
ArfGap	PF01412	503 - 593	1.5e-31	Putative GTPase activating protein for Arf
Ank_5	PF13857	727 - 767	9.2e-06	Ankyrin repeats (many copies)
Ank_2	PF12796	728 - 791	1.5e-11	Ankyrin repeats (3 copies)
Ank	PF00023	729 - 759	5.7e-06	Ankyrin repeat
Ank_2	PF12796	733 - 817	5.5e-13	Ankyrin repeats (3 copies)
Ank_4	PF13637	733 - 782	1.1e-11	Ankyrin repeats (many copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13300
fragaria_vesca	FvH4_4g22770 FvH4_4g22770
malus_domestica	MD13G1129800.v1.1 MD16G1130100.v1.1
prunus_persica	Prupe.1G216500_v2.0.a1
pyrus_communis	pycom13g11290 pycom16g11080
rosa_chinensis	RchiOBHm_Chr4g0428991
rosa_laevigata	RLG00000007106
rosa_multiflora	Rmu_sc0008629.1_g000014
rosa_roxburghii	Rroxscaffold_5G00370650
rosa_rugosa	Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800
rosa_samantha	Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900
rosa_wichuraiana	Rw0G014080 Rw4G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	273, 1703
AarI	CACCTGC	1 cut(s)	747
Acc16I	TGCGCA	1 cut(s)	669
Acc36I	ACCTGC	1 cut(s)	747
AccBSI	CCGCTC	1 cut(s)	2393
AccI	GTMKAC	1 cut(s)	1164
AciI	CCGC	9 cut(s)	37, 79, 1478, 1550, 1892, 2018, 2181, 2294, 2391
AclWI	GGATC	4 cut(s)	194, 790, 1208, 2420
AcoI	YGGCCR	1 cut(s)	1348
AcsI	RAATTY	4 cut(s)	239, 557, 1418, 2416
AcuI	CTGAAG	3 cut(s)	144, 308, 1434
AcyI	GRCGYC	1 cut(s)	840
AfaI	GTAC	5 cut(s)	436, 602, 731, 1448, 2085
AfeI	AGCGCT	1 cut(s)	371
AfiI	CCNNNNNNNGG	2 cut(s)	1047, 2230
AflIII	ACRYGT	1 cut(s)	1224
AgeI	ACCGGT	1 cut(s)	226
AjiI	CACGTC	1 cut(s)	1678
AjnI	CCWGG	2 cut(s)	1327, 1814
Alw21I	GWGCWC	3 cut(s)	172, 1246, 1564
Alw26I	GTCTC	3 cut(s)	95, 918, 1914
Alw44I	GTGCAC	2 cut(s)	168, 1242
AlwI	GGATC	4 cut(s)	194, 790, 1208, 2420
AlwNI	CAGNNNCTG	1 cut(s)	1805
Aor51HI	AGCGCT	1 cut(s)	371
AoxI	GGCC	5 cut(s)	190, 402, 1348, 1457, 2093
ApaLI	GTGCAC	2 cut(s)	168, 1242
ApeKI	GCWGC	8 cut(s)	452, 455, 704, 857, 1943, 2245, 2296, 2405
ApoI	RAATTY	4 cut(s)	239, 557, 1418, 2416
ArsI	GACNNNNNNTTYG	2 cut(s)	143, 175
AsiGI	ACCGGT	1 cut(s)	226
Asp700I	GAANNNNTTC	2 cut(s)	282, 1758
AspLEI	GCGC	4 cut(s)	68, 372, 670, 1775
AspS9I	GGNCC	4 cut(s)	224, 403, 1309, 1485
AsuC2I	CCSGG	3 cut(s)	959, 1791, 2363
AsuHPI	GGTGA	7 cut(s)	777, 1138, 1200, 1511, 1619, 1831, 2024
AsuII	TTCGAA	2 cut(s)	1079, 1522
AsuNHI	GCTAGC	1 cut(s)	383
AvaII	GGWCC	3 cut(s)	224, 1309, 1485
AxyI	CCTNAGG	1 cut(s)	2172
BaeGI	GKGCMC	2 cut(s)	172, 1246
BalI	TGGCCA	1 cut(s)	1350
BanII	GRGCYC	1 cut(s)	1564
BbsI	GAAGAC	2 cut(s)	1316, 2300
Bbv12I	GWGCWC	3 cut(s)	172, 1246, 1564
BbvI	GCAGC	8 cut(s)	439, 442, 716, 844, 1930, 2232, 2283, 2392
BceAI	ACGGC	1 cut(s)	827
BciT130I	CCWGG	2 cut(s)	1329, 1816
BciVI	GTATCC	1 cut(s)	2456
BclI	TGATCA	2 cut(s)	1171, 1399
BcnI	CCSGG	3 cut(s)	959, 1791, 2363
BcoDI	GTCTC	3 cut(s)	95, 918, 1914
BfaI	CTAG	4 cut(s)	131, 384, 1365, 2349
BfmI	CTRYAG	3 cut(s)	1119, 2246, 2406
BfoI	RGCGCY	2 cut(s)	373, 1776
BfuAI	ACCTGC	1 cut(s)	747
BfuI	GTATCC	1 cut(s)	2456
BglII	AGATCT	1 cut(s)	1180
Bme1390I	CCNGG	5 cut(s)	959, 1329, 1791, 1816, 2363
Bme18I	GGWCC	3 cut(s)	224, 1309, 1485
BmgBI	CACGTC	1 cut(s)	1678
BmgT120I	GGNCC	4 cut(s)	224, 403, 1309, 1485
BmiI	GGNNCC	4 cut(s)	639, 1311, 1692, 2188
BmrFI	CCNGG	5 cut(s)	959, 1329, 1791, 1816, 2363
BmrI	ACTGGG	2 cut(s)	1287, 1585
BmsI	GCATC	7 cut(s)	98, 577, 637, 711, 1298, 1504, 2005
BmtI	GCTAGC	1 cut(s)	387
BmuI	ACTGGG	2 cut(s)	1287, 1585
BpiI	GAAGAC	2 cut(s)	1316, 2300
BpmI	CTGGAG	1 cut(s)	1548
Bpu14I	TTCGAA	2 cut(s)	1079, 1522
BpuEI	CTTGAG	1 cut(s)	77
BpuMI	CCSGG	3 cut(s)	959, 1791, 2363
Bsa29I	ATCGAT	1 cut(s)	1357
BsaBI	GATNNNNATC	2 cut(s)	591, 1859
BsaHI	GRCGYC	1 cut(s)	840
BsaJI	CCNNGG	5 cut(s)	958, 1338, 1789, 1815, 2224
BsaWI	WCCGGW	1 cut(s)	226
BsaXI	ACNNNNNCTCC	2 cut(s)	213, 243
Bsc4I	CCNNNNNNNGG	2 cut(s)	1047, 2230
Bse118I	RCCGGY	2 cut(s)	226, 1995
Bse1I	ACTGG	5 cut(s)	932, 1282, 1580, 1834, 2049
Bse21I	CCTNAGG	1 cut(s)	2172
Bse3DI	GCAATG	2 cut(s)	153, 1981
Bse8I	GATNNNNATC	2 cut(s)	591, 1859
BseBI	CCWGG	2 cut(s)	1329, 1816
BseCI	ATCGAT	1 cut(s)	1357
BseDI	CCNNGG	5 cut(s)	958, 1338, 1789, 1815, 2224
BseGI	GGATG	7 cut(s)	113, 592, 1402, 1776, 2026, 2113, 2235
BseJI	GATNNNNATC	2 cut(s)	591, 1859
BseLI	CCNNNNNNNGG	2 cut(s)	1047, 2230
BseMI	GCAATG	2 cut(s)	153, 1981
BseMII	CTCAG	8 cut(s)	908, 1175, 1227, 1319, 2131, 2163, 2286, 2326
BseNI	ACTGG	5 cut(s)	932, 1282, 1580, 1834, 2049
BseRI	GAGGAG	3 cut(s)	74, 936, 1447
BseSI	GKGCMC	2 cut(s)	172, 1246
BseXI	GCAGC	8 cut(s)	439, 442, 716, 844, 1930, 2232, 2283, 2392
BseYI	CCCAGC	1 cut(s)	1838
BsgI	GTGCAG	2 cut(s)	1929, 2282
BshFI	GGCC	5 cut(s)	192, 404, 1350, 1459, 2095
BshTI	ACCGGT	1 cut(s)	226
BshVI	ATCGAT	1 cut(s)	1357
BsiHKAI	GWGCWC	3 cut(s)	172, 1246, 1564
BsiSI	CCGG	6 cut(s)	112, 227, 958, 1791, 1996, 2363
BslFI	GGGAC	5 cut(s)	164, 280, 1295, 1320, 1973
BslI	CCNNNNNNNGG	2 cut(s)	1047, 2230
BsmAI	GTCTC	3 cut(s)	95, 918, 1914
BsmFI	GGGAC	5 cut(s)	164, 280, 1295, 1320, 1973
BsmI	GAATGC	1 cut(s)	969
BsnI	GGCC	5 cut(s)	192, 404, 1350, 1459, 2095
Bsp119I	TTCGAA	2 cut(s)	1079, 1522
Bsp1286I	GDGCHC	3 cut(s)	172, 1246, 1564
Bsp19I	CCATGG	1 cut(s)	1338
BspACI	CCGC	9 cut(s)	37, 79, 1478, 1550, 1892, 2018, 2181, 2294, 2391
BspANI	GGCC	5 cut(s)	192, 404, 1350, 1459, 2095
BspCNI	CTCAG	8 cut(s)	909, 1176, 1228, 1318, 2130, 2164, 2285, 2325
BspDI	ATCGAT	1 cut(s)	1357
BspLI	GGNNCC	4 cut(s)	639, 1311, 1692, 2188
BspMAI	CTGCAG	2 cut(s)	2250, 2410
BspMI	ACCTGC	1 cut(s)	747
BspOI	GCTAGC	1 cut(s)	387
BspPI	GGATC	4 cut(s)	194, 790, 1208, 2420
BspQI	GCTCTTC	1 cut(s)	1524
BspT104I	TTCGAA	2 cut(s)	1079, 1522
BsrBI	CCGCTC	1 cut(s)	2393
BsrDI	GCAATG	2 cut(s)	153, 1981
BsrFI	RCCGGY	2 cut(s)	226, 1995
BsrI	ACTGG	5 cut(s)	932, 1282, 1580, 1834, 2049
BssAI	RCCGGY	2 cut(s)	226, 1995
BssECI	CCNNGG	5 cut(s)	958, 1338, 1789, 1815, 2224
BssNI	GRCGYC	1 cut(s)	840
BssT1I	CCWWGG	2 cut(s)	1338, 2224
Bst2UI	CCWGG	2 cut(s)	1329, 1816
Bst6I	CTCTTC	1 cut(s)	1524
BstACI	GRCGYC	1 cut(s)	840
BstBI	TTCGAA	2 cut(s)	1079, 1522
BstC8I	GCNNGC	4 cut(s)	385, 501, 1016, 1233
BstDSI	CCRYGG	1 cut(s)	1338
BstF5I	GGATG	7 cut(s)	113, 592, 1402, 1776, 2026, 2113, 2235
BstH2I	RGCGCY	2 cut(s)	373, 1776
BstHHI	GCGC	4 cut(s)	68, 372, 670, 1775
BstMAI	GTCTC	3 cut(s)	95, 918, 1914
BstMWI	GCNNNNNNNGC	3 cut(s)	1241, 1889, 2245
BstNI	CCWGG	2 cut(s)	1329, 1816
BstSCI	CCNGG	5 cut(s)	957, 1327, 1789, 1814, 2361
BstSFI	CTRYAG	3 cut(s)	1119, 2246, 2406
BstSLI	GKGCMC	2 cut(s)	172, 1246
BstV1I	GCAGC	8 cut(s)	439, 442, 716, 844, 1930, 2232, 2283, 2392
BstV2I	GAAGAC	2 cut(s)	1316, 2300
BstX2I	RGATCY	1 cut(s)	1180
BstXI	CCANNNNNNTGG	3 cut(s)	1022, 1721, 1822
BstYI	RGATCY	1 cut(s)	1180
Bsu15I	ATCGAT	1 cut(s)	1357
Bsu36I	CCTNAGG	1 cut(s)	2172
BsuI	GTATCC	1 cut(s)	2456
BsuRI	GGCC	5 cut(s)	192, 404, 1350, 1459, 2095
BsuTUI	ATCGAT	1 cut(s)	1357
BtgI	CCRYGG	1 cut(s)	1338
BtrI	CACGTC	1 cut(s)	1678
BtsCI	GGATG	7 cut(s)	113, 592, 1402, 1776, 2026, 2113, 2235
BtsI	GCAGTG	1 cut(s)	1971
BveI	ACCTGC	1 cut(s)	747
Cac8I	GCNNGC	4 cut(s)	385, 501, 1016, 1233
CaiI	CAGNNNCTG	1 cut(s)	1805
CfoI	GCGC	4 cut(s)	68, 372, 670, 1775
Cfr10I	RCCGGY	2 cut(s)	226, 1995
Cfr13I	GGNCC	4 cut(s)	224, 403, 1309, 1485
ClaI	ATCGAT	1 cut(s)	1357
CseI	GACGC	4 cut(s)	848, 1175, 1310, 1970
Csp6I	GTAC	5 cut(s)	435, 601, 730, 1447, 2084
CspAI	ACCGGT	1 cut(s)	226
CspCI	CAANNNNNGTGG	4 cut(s)	192, 227, 1937, 1972
CviAII	CATG	7 cut(s)	31, 55, 347, 1088, 1094, 1106, 1339
CviQI	GTAC	5 cut(s)	435, 601, 730, 1447, 2084
DraI	TTTAAA	1 cut(s)	1587
EaeI	YGGCCR	1 cut(s)	1348
Eam1104I	CTCTTC	1 cut(s)	1524
EarI	CTCTTC	1 cut(s)	1524
Ecl136II	GAGCTC	1 cut(s)	1562
Eco130I	CCWWGG	2 cut(s)	1338, 2224
Eco24I	GRGCYC	1 cut(s)	1564
Eco32I	GATATC	1 cut(s)	1857
Eco47I	GGWCC	3 cut(s)	224, 1309, 1485
Eco47III	AGCGCT	1 cut(s)	371
Eco53kI	GAGCTC	1 cut(s)	1562
Eco57I	CTGAAG	3 cut(s)	144, 308, 1434
Eco81I	CCTNAGG	1 cut(s)	2172
EcoICRI	GAGCTC	1 cut(s)	1562
EcoO109I	RGGNCCY	1 cut(s)	1309
EcoRII	CCWGG	2 cut(s)	1327, 1814
EcoRV	GATATC	1 cut(s)	1857
EcoT14I	CCWWGG	2 cut(s)	1338, 2224
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	1 cut(s)	1564
ErhI	CCWWGG	2 cut(s)	1338, 2224
FaeI	CATG	7 cut(s)	34, 58, 350, 1091, 1097, 1109, 1342
FalI	AAGNNNNNCTT	4 cut(s)	199, 231, 693, 725
FaqI	GGGAC	5 cut(s)	164, 280, 1295, 1320, 1973
FatI	CATG	7 cut(s)	30, 54, 346, 1087, 1093, 1105, 1338
FauI	CCCGC	1 cut(s)	72
FauNDI	CATATG	2 cut(s)	664, 1381
FbaI	TGATCA	2 cut(s)	1171, 1399
FblI	GTMKAC	1 cut(s)	1164
FokI	GGATG	7 cut(s)	120, 599, 1389, 1763, 2033, 2120, 2242
FriOI	GRGCYC	1 cut(s)	1564
FspBI	CTAG	4 cut(s)	131, 384, 1365, 2349
FspI	TGCGCA	1 cut(s)	669
GlaI	GCGC	4 cut(s)	67, 371, 669, 1774
GsaI	CCCAGC	1 cut(s)	1842
GsuI	CTGGAG	1 cut(s)	1548
HaeII	RGCGCY	2 cut(s)	373, 1776
HaeIII	GGCC	5 cut(s)	192, 404, 1350, 1459, 2095
HapII	CCGG	6 cut(s)	112, 227, 958, 1791, 1996, 2363
HgaI	GACGC	4 cut(s)	848, 1175, 1310, 1970
HhaI	GCGC	4 cut(s)	68, 372, 670, 1775
Hin1I	GRCGYC	1 cut(s)	840
Hin1II	CATG	7 cut(s)	34, 58, 350, 1091, 1097, 1109, 1342
Hin6I	GCGC	4 cut(s)	66, 370, 668, 1773
HinP1I	GCGC	4 cut(s)	66, 370, 668, 1773
HincII	GTYRAC	2 cut(s)	1165, 2061
HindII	GTYRAC	2 cut(s)	1165, 2061
HindIII	AAGCTT	1 cut(s)	14
HinfI	GANTC	3 cut(s)	23, 2276, 2411
HpaI	GTTAAC	1 cut(s)	2061
HpaII	CCGG	6 cut(s)	112, 227, 958, 1791, 1996, 2363
HphI	GGTGA	7 cut(s)	777, 1138, 1200, 1511, 1619, 1831, 2024
Hpy166II	GTNNAC	8 cut(s)	170, 1138, 1165, 1244, 1627, 1993, 2061, 2266
Hpy8I	GTNNAC	8 cut(s)	170, 1138, 1165, 1244, 1627, 1993, 2061, 2266
Hpy99I	CGWCG	2 cut(s)	1169, 1679
HpyAV	CCTTC	4 cut(s)	119, 930, 2209, 2375
HpyCH4IV	ACGT	3 cut(s)	447, 1226, 1677
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1241, 1889, 2245
HpySE526I	ACGT	3 cut(s)	447, 1226, 1677
Hsp92I	GRCGYC	1 cut(s)	840
Hsp92II	CATG	7 cut(s)	34, 58, 350, 1091, 1097, 1109, 1342
HspAI	GCGC	4 cut(s)	66, 370, 668, 1773
Ksp22I	TGATCA	2 cut(s)	1171, 1399
KspAI	GTTAAC	1 cut(s)	2061
LguI	GCTCTTC	1 cut(s)	1524
LmnI	GCTCC	7 cut(s)	1043, 1434, 1559, 1567, 1690, 1770, 2354
Lsp1109I	GCAGC	8 cut(s)	439, 442, 716, 844, 1930, 2232, 2283, 2392
LweI	GCATC	7 cut(s)	98, 577, 637, 711, 1298, 1504, 2005
MaeI	CTAG	4 cut(s)	131, 384, 1365, 2349
MaeII	ACGT	3 cut(s)	447, 1226, 1677
MaeIII	GTNAC	9 cut(s)	45, 288, 443, 517, 614, 1662, 1825, 2133, 2323
MbiI	CCGCTC	1 cut(s)	2393
MfeI	CAATTG	1 cut(s)	246
MflI	RGATCY	1 cut(s)	1180
MhlI	GDGCHC	3 cut(s)	172, 1246, 1564
MlsI	TGGCCA	1 cut(s)	1350
MluNI	TGGCCA	1 cut(s)	1350
MlyI	GAGTC	2 cut(s)	17, 2420
Mox20I	TGGCCA	1 cut(s)	1350
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	282, 1758
MscI	TGGCCA	1 cut(s)	1350
MseI	TTAA	7 cut(s)	354, 711, 1158, 1586, 1796, 2060, 2123
MslI	CAYNNNNRTG	2 cut(s)	1092, 1098
Msp20I	TGGCCA	1 cut(s)	1350
MspA1I	CMGCKG	2 cut(s)	1943, 2296
MspI	CCGG	6 cut(s)	112, 227, 958, 1791, 1996, 2363
MspR9I	CCNGG	5 cut(s)	959, 1329, 1791, 1816, 2363
MunI	CAATTG	1 cut(s)	246
Mva1269I	GAATGC	1 cut(s)	969
MvaI	CCWGG	2 cut(s)	1329, 1816
MwoI	GCNNNNNNNGC	3 cut(s)	1241, 1889, 2245
NciI	CCSGG	3 cut(s)	959, 1791, 2363
NcoI	CCATGG	1 cut(s)	1338
NdeI	CATATG	2 cut(s)	664, 1381
NheI	GCTAGC	1 cut(s)	383
NlaIII	CATG	7 cut(s)	34, 58, 350, 1091, 1097, 1109, 1342
NlaIV	GGNNCC	4 cut(s)	639, 1311, 1692, 2188
NmuCI	GTSAC	6 cut(s)	288, 443, 517, 1662, 1825, 2323
NsbI	TGCGCA	1 cut(s)	669
NsiI	ATGCAT	1 cut(s)	6
NspV	TTCGAA	2 cut(s)	1079, 1522
PaqCI	CACCTGC	1 cut(s)	747
PciSI	GCTCTTC	1 cut(s)	1524
PctI	GAATGC	1 cut(s)	969
PdmI	GAANNNNTTC	2 cut(s)	282, 1758
PfeI	GAWTC	1 cut(s)	2276
PinAI	ACCGGT	1 cut(s)	226
PleI	GAGTC	2 cut(s)	17, 2419
PpsI	GAGTC	2 cut(s)	17, 2419
PpuMI	RGGWCCY	1 cut(s)	1309
PsiI	TTATAA	2 cut(s)	273, 1703
Psp124BI	GAGCTC	1 cut(s)	1564
Psp5II	RGGWCCY	1 cut(s)	1309
Psp6I	CCWGG	2 cut(s)	1327, 1814
PspFI	CCCAGC	1 cut(s)	1838
PspGI	CCWGG	2 cut(s)	1327, 1814
PspN4I	GGNNCC	4 cut(s)	639, 1311, 1692, 2188
PspPI	GGNCC	4 cut(s)	224, 403, 1309, 1485
PspPPI	RGGWCCY	1 cut(s)	1309
PsrI	GAACNNNNNNTAC	2 cut(s)	1600, 1632
PstI	CTGCAG	2 cut(s)	2250, 2410
PstNI	CAGNNNCTG	1 cut(s)	1805
PsuI	RGATCY	1 cut(s)	1180
PvuII	CAGCTG	1 cut(s)	1943
RsaI	GTAC	5 cut(s)	436, 602, 731, 1448, 2085
RsaNI	GTAC	5 cut(s)	435, 601, 730, 1447, 2084
RseI	CAYNNNNRTG	2 cut(s)	1092, 1098
SacI	GAGCTC	1 cut(s)	1564
SalI	GTCGAC	1 cut(s)	1163
SapI	GCTCTTC	1 cut(s)	1524
SaqAI	TTAA	7 cut(s)	354, 711, 1158, 1586, 1796, 2060, 2123
Sau96I	GGNCC	4 cut(s)	224, 403, 1309, 1485
SchI	GAGTC	2 cut(s)	17, 2420
ScrFI	CCNGG	5 cut(s)	959, 1329, 1791, 1816, 2363
SduI	GDGCHC	3 cut(s)	172, 1246, 1564
SfaNI	GCATC	7 cut(s)	98, 577, 637, 711, 1298, 1504, 2005
SfcI	CTRYAG	3 cut(s)	1119, 2246, 2406
SfuI	TTCGAA	2 cut(s)	1079, 1522
SinI	GGWCC	3 cut(s)	224, 1309, 1485
SmiMI	CAYNNNNRTG	2 cut(s)	1092, 1098
SmlI	CTYRAG	1 cut(s)	92
SmoI	CTYRAG	1 cut(s)	92
SsiI	CCGC	9 cut(s)	37, 79, 1478, 1550, 1892, 2018, 2181, 2294, 2391
SspI	AATATT	2 cut(s)	75, 2079
SspMI	CTAG	4 cut(s)	131, 384, 1365, 2349
SstI	GAGCTC	1 cut(s)	1564
StyD4I	CCNGG	5 cut(s)	957, 1327, 1789, 1814, 2361
StyI	CCWWGG	2 cut(s)	1338, 2224
TaiI	ACGT	3 cut(s)	450, 1229, 1680
TaqI	TCGA	9 cut(s)	482, 748, 1079, 1164, 1248, 1357, 1522, 1611, 1674
TaqII	GACCGA	1 cut(s)	276
TatI	WGTACW	1 cut(s)	729
TauI	GCSGC	2 cut(s)	1480, 2296
TfiI	GAWTC	1 cut(s)	2276
Tru1I	TTAA	7 cut(s)	354, 711, 1158, 1586, 1796, 2060, 2123
Tru9I	TTAA	7 cut(s)	354, 711, 1158, 1586, 1796, 2060, 2123
TseFI	GTSAC	6 cut(s)	288, 443, 517, 1662, 1825, 2323
TseI	GCWGC	8 cut(s)	452, 455, 704, 857, 1943, 2245, 2296, 2405
Tsp45I	GTSAC	6 cut(s)	288, 443, 517, 1662, 1825, 2323
TspDTI	ATGAA	8 cut(s)	363, 464, 711, 729, 1398, 1467, 1751, 2387
VneI	GTGCAC	2 cut(s)	168, 1242
VpaK11BI	GGWCC	3 cut(s)	224, 1309, 1485
XapI	RAATTY	4 cut(s)	239, 557, 1418, 2416
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1572
XmiI	GTMKAC	1 cut(s)	1164
XmnI	GAANNNNTTC	2 cut(s)	282, 1758
XspI	CTAG	4 cut(s)	131, 384, 1365, 2349
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.