Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0008303

Physical Location & Seq

Genomic Coordinates Reverse (-)

7656268 .. 7663174

Gene Structure 6907 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g11080.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGCATTTCACTAAGCTCGATGACTCTCCTATGTTCCGCAAGCAGATACTATCCATGGAGGAAAATGCGGAAACTTTGAGGGAGAGAAGTTTGAGGTTTTACAAAGGATGCCGAAAATACACTGAAGGGCTTGGGGAAGCATATGATGGGGACATTGCTTTTGCTAGCGCCTTAGAAACTTTTGGCGGGGGGCATAATGATCCAATCAGTGTGGCTTTTGGAGGTCCTGTTATGACTAAATTTACTATCGCATTGAGAGAAATTGGGACATACAAGGAAGTTCTTCGATCCCAGGTTGAGCATATGCTAAATGACAGACTGTTACAGTTTGTGAATATTGATTTGCATGAGGTCAAGGAAGCGCGGAAACATTTTGACAAGGCTAGCCTTGTTTATGACCAGGCTCGTGAGAAATTTCTCTCACTGAGAAAAGGCACAAAGAGCGACGTGGTTACCCTTCTTGAGGAGGAGCTTCATAATGCAAGGACTACATTTGAGCAAGCTCGTTTTAGTCTGGTGACTGCTCTTTCTAATGTTGAAGCGAAAAAGAGGTTTCAATTTCTGGAAGCGGTCAGTGGAACAATGGATGCACATCTTCGTTACTTCAAACAGGGTTACGAGTTGTTGCATCAAATGGAGCCATATATTAATCAGGTCTTGACATATGCTCAACAATCAAGAGAAAGATCCAATTATGAACAGGCTGCTCTTCATGAAAGGATGCAAGATTACAAACGACAGGTTGATCGAGAGAGTAGGTGGTCTTCTAATGGTTCTAATCGATCTCCCAATGGGGATGGGATACAAGCCATTGGTAGAAGTTCGCATAAAATGATAGATGCTGTTATGCAGTCTGCTGCAAAGGGAAAGGTTCAAACCATTAGGCAAGGTTACCTCTCAAAACGTTCCTCTAACTTAAGAGGTGACTGGAAAAGAAGGTTTTTTGTTCTTGATAGCCGAGGAATGCTCTATTACTATCGGAAACAATGCAGCAAACCATCTGGATCTGGTAGTCAACTTTCTGGTCAAAGGAATAGTTCTGAGCTTGGTTCTGGACTGCTGAGTCGGTGGCTTTCTTCTCATTATCATGGTGGAGTGCATGATGAGAAATCTGTTGCTCATCACACAGTGAATCTGCTTACATCAACTATCAAAGTTGATGCTGACCAGTCAGATCTGAGGTTTTGTTTCAGAATCATTTCACCGACAAAGAACTATACTTTGCAGGCAGAGAGTGCACTTGATCAAATGGAATGGATTGAAAAGATAACAGGGGTTATTGCTTCATTACTTAGCTCTCAAGCTCCTGAGAGGTTTCTGCCTGCTAGTCCCATGGGAAGCCATCGTCATTCTGCCAGTGAGAGTAGTTCATTTGAGAGCTCTGATTTTGATCACACTGGAGTTGAAGAAATTGTGTCCGAGAGGAGCCTTACTTCTGCAAATTCTGAGCGCCCATTGAGAAGCTCACAACATCAAAGATCATCTTTAAAAACCGAAAAGACAATTGACATGCTACGACGAGTATGTGGGAATGATAAGTGTGCTGATTGTGGTGCCCCAGAGCCAGATTGGGCATCATTAAATCTTGGTGTTCTCGTTTGTATTGAGTGCTCCGGTGTTCATCGTAATCTTGGTGTACATATCTCAAAGGTAAGGTCTCTTACACTGGATGTTAAAGTGTGGGAGCCTTCCGTTATAAATTTGTTTCAGTCTTTGGGTAATGCCTTTTCCAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAACTGCCTTTCAGATCGATCTTATATCCACAGGGTCATACAAGTCCGATAAAAAACAGCTAGTTTTTATCAGCAAACCCAGTCAGAGTGATTCTATACCAGTAAAGGAGAAATTCATTCATGCAAAGTACGCAGAAAAGCTTTTTGTCCGGAAACCAAAAGATGCACAATATACTCATTTGGTAGCACAACAGATTTGGGAGGGTGTTCGTGCTAATGACAAAAAAGCTGTATATCGTCACATTGTTAATTCTGAACCAGATTTGAATGCGGTGTATGAGCAAGCATCATGTAACTCTTCATTAACCCTTGCCAAAGTAATGCTGATGCATGAGCAGACTAGCCATGACCAAGGCTCGAGCTGCTTAGCTGGGGATTCATTAGACAAGTCGTCACATAGCTCTTCAAACTTGAGTGGTACAAGTGAAGGCCAGCAAGTGGAGGATCTAGATGGGTGCACTCTTCTCCACCTTGCTTGTGAAACTGCTGACATTGGCATGCTTGAACTCCTCTTACAGTATGGAGTGAATATAAATGTGATTGATTCAAGAGGTCACACACCACTCGACCGTTGTATTCTGAGAGGCAAAAACACATTCGCAAAATTGCTTCTTACAAGGGGAGCTGATCCACGAGCATTAAATGGGGAAGGGAAAACCCCCCTTGAACTGGCAGTGGAGTCGAACTTTGATGATAGCGAGGTCCTTGCTATGTTATCGGACTCCAATGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007275 GO:0007389 GO:0008047 GO:0008150 GO:0008289 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010087 GO:0012505 GO:0016020 GO:0016192 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030234 GO:0030695 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035091 GO:0042221 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050790 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097708 GO:0098657 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 Ank_5 ArfGap BAR_3 PH Pkinase

Protein Analysis

832

Amino Acids

93.14

Weight (kDa)

7.01

Isoelectric Point (pI)

51.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13300
fragaria_vesca	FvH4_4g22770 FvH4_4g22770
malus_domestica	MD13G1129800.v1.1 MD16G1130100.v1.1
prunus_persica	Prupe.1G216500_v2.0.a1
pyrus_communis	pycom13g11290 pycom16g11080
rosa_chinensis	RchiOBHm_Chr4g0428991
rosa_laevigata	RLG00000007106
rosa_multiflora	Rmu_sc0008629.1_g000014
rosa_roxburghii	Rroxscaffold_5G00370650
rosa_rugosa	Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800
rosa_samantha	Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900
rosa_wichuraiana	Rw0G014080 Rw4G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1697
AasI	GACNNNNNNGTC	1 cut(s)	1062
AccB1I	GGYRCC	1 cut(s)	1553
AccB7I	CCANNNNNTGG	1 cut(s)	2200
AccII	CGCG	1 cut(s)	364
AccIII	TCCGGA	1 cut(s)	1911
AciI	CCGC	6 cut(s)	37, 68, 186, 364, 569, 2033
AclI	AACGTT	1 cut(s)	904
AclWI	GGATC	6 cut(s)	194, 282, 681, 1012, 2214, 2384
AcsI	RAATTY	5 cut(s)	239, 413, 1441, 1699, 1874
AcuI	CTGAAG	1 cut(s)	144
AdeI	CACNNNGTG	1 cut(s)	1129
AfaI	GTAC	3 cut(s)	1638, 1892, 2182
AfiI	CCNNNNNNNGG	3 cut(s)	463, 2200, 2431
AflII	CTTAAG	1 cut(s)	916
AhdI	GACNNNNNGTC	1 cut(s)	2152
AjiI	CACGTC	1 cut(s)	448
AjnI	CCWGG	2 cut(s)	291, 399
Alw21I	GWGCWC	4 cut(s)	1240, 1382, 1613, 2222
Alw26I	GTCTC	1 cut(s)	1662
Alw44I	GTGCAC	2 cut(s)	1236, 2218
AlwI	GGATC	6 cut(s)	194, 282, 681, 1012, 2214, 2384
Ama87I	CYCGRG	1 cut(s)	2119
Aor13HI	TCCGGA	1 cut(s)	1911
AoxI	GGCC	1 cut(s)	2191
ApaLI	GTGCAC	2 cut(s)	1236, 2218
ApeKI	GCWGC	4 cut(s)	704, 857, 990, 2124
ApoI	RAATTY	5 cut(s)	239, 413, 1441, 1699, 1874
ArsI	GACNNNNNNTTYG	4 cut(s)	143, 175, 1640, 1672
AseI	ATTAAT	1 cut(s)	648
Asp700I	GAANNNNTTC	2 cut(s)	282, 1198
AspLEI	GCGC	3 cut(s)	170, 364, 1452
AspS9I	GGNCC	2 cut(s)	224, 2464
AsuHPI	GGTGA	3 cut(s)	529, 935, 1194
AsuNHI	GCTAGC	2 cut(s)	164, 383
AvaI	CYCGRG	1 cut(s)	2119
AvaII	GGWCC	2 cut(s)	224, 2464
BaeGI	GKGCMC	3 cut(s)	1240, 1558, 2222
BanI	GGYRCC	1 cut(s)	1553
BanII	GRGCYC	1 cut(s)	1382
BarI	GAAGNNNNNNTAC	2 cut(s)	748, 780
BauI	CACGAG	2 cut(s)	405, 2394
BbsI	GAAGAC	1 cut(s)	756
Bbv12I	GWGCWC	4 cut(s)	1240, 1382, 1613, 2222
BbvI	GCAGC	4 cut(s)	691, 844, 1002, 2111
BccI	CCATC	5 cut(s)	140, 791, 1006, 1350, 2207
BcgI	CGANNNNNNTGC	4 cut(s)	2424, 2450, 2458, 2484
BciT130I	CCWGG	2 cut(s)	293, 401
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	2 cut(s)	1243, 1390
BcoDI	GTCTC	1 cut(s)	1662
BfaI	CTAG	6 cut(s)	165, 384, 1326, 1823, 2103, 2210
BfoI	RGCGCY	2 cut(s)	171, 1453
BfrI	CTTAAG	1 cut(s)	916
BfuI	GTATCC	1 cut(s)	795
BglII	AGATCT	1 cut(s)	1174
BisI	GCNGC	4 cut(s)	705, 858, 991, 2125
BlpI	GCTNAGC	1 cut(s)	2128
BlsI	GCNGC	4 cut(s)	706, 859, 992, 2126
Bme1390I	CCNGG	2 cut(s)	293, 401
Bme18I	GGWCC	2 cut(s)	224, 2464
BmeRI	GACNNNNNGTC	1 cut(s)	2152
BmeT110I	CYCGRG	1 cut(s)	2119
BmgBI	CACGTC	1 cut(s)	448
BmgT120I	GGNCC	2 cut(s)	224, 2464
BmiI	GGNNCC	4 cut(s)	639, 1427, 1555, 1686
BmrFI	CCNGG	2 cut(s)	293, 401
BmrI	ACTGGG	1 cut(s)	1836
BmtI	GCTAGC	2 cut(s)	168, 387
BmuI	ACTGGG	1 cut(s)	1836
BpiI	GAAGAC	1 cut(s)	756
BplI	GAGNNNNNCTC	2 cut(s)	951, 983
BpmI	CTGGAG	1 cut(s)	1419
Bpu1102I	GCTNAGC	1 cut(s)	2128
BpuEI	CTTGAG	3 cut(s)	482, 1284, 2194
Bsa29I	ATCGAT	2 cut(s)	781, 1779
BsaBI	GATNNNNATC	2 cut(s)	591, 1389
BsaI	GGTCTC	1 cut(s)	1662
BsaJI	CCNNGG	5 cut(s)	54, 291, 958, 1332, 2113
BsaWI	WCCGGW	2 cut(s)	1613, 1911
BsaXI	ACNNNNNCTCC	2 cut(s)	213, 243
Bsc4I	CCNNNNNNNGG	3 cut(s)	463, 2200, 2431
Bse1I	ACTGG	8 cut(s)	932, 1168, 1356, 1402, 1671, 1842, 1862, 2436
Bse3DI	GCAATG	1 cut(s)	153
Bse8I	GATNNNNATC	2 cut(s)	591, 1389
BseAI	TCCGGA	1 cut(s)	1911
BseBI	CCWGG	2 cut(s)	293, 401
BseCI	ATCGAT	2 cut(s)	781, 1779
BseDI	CCNNGG	5 cut(s)	54, 291, 958, 1332, 2113
BseGI	GGATG	5 cut(s)	113, 592, 726, 802, 1675
BseJI	GATNNNNATC	2 cut(s)	591, 1389
BseLI	CCNNNNNNNGG	3 cut(s)	463, 2200, 2431
BseMI	GCAATG	1 cut(s)	153
BseMII	CTCAG	7 cut(s)	416, 1032, 1052, 1169, 1299, 1437, 2333
BseNI	ACTGG	8 cut(s)	932, 1168, 1356, 1402, 1671, 1842, 1862, 2436
BseRI	GAGGAG	4 cut(s)	479, 482, 1438, 2261
BseSI	GKGCMC	3 cut(s)	1240, 1558, 2222
BseXI	GCAGC	4 cut(s)	691, 844, 1002, 2111
BseYI	CCCAGC	1 cut(s)	2132
Bsh1236I	CGCG	1 cut(s)	364
Bsh1285I	CGRYCG	1 cut(s)	2332
BshFI	GGCC	1 cut(s)	2193
BshNI	GGYRCC	1 cut(s)	1553
BshVI	ATCGAT	2 cut(s)	781, 1779
BsiEI	CGRYCG	1 cut(s)	2332
BsiHKAI	GWGCWC	4 cut(s)	1240, 1382, 1613, 2222
BsiHKCI	CYCGRG	1 cut(s)	2119
BsiSI	CCGG	2 cut(s)	1614, 1912
BslFI	GGGAC	3 cut(s)	164, 280, 1314
BslI	CCNNNNNNNGG	3 cut(s)	463, 2200, 2431
BsmAI	GTCTC	1 cut(s)	1662
BsmFI	GGGAC	3 cut(s)	164, 280, 1314
BsmI	GAATGC	2 cut(s)	969, 2035
BsnI	GGCC	1 cut(s)	2193
Bso31I	GGTCTC	1 cut(s)	1662
BsoBI	CYCGRG	1 cut(s)	2119
Bsp1286I	GDGCHC	5 cut(s)	1240, 1382, 1558, 1613, 2222
Bsp13I	TCCGGA	1 cut(s)	1911
Bsp1407I	TGTACA	1 cut(s)	1636
Bsp1720I	GCTNAGC	1 cut(s)	2128
Bsp19I	CCATGG	2 cut(s)	54, 1332
BspACI	CCGC	6 cut(s)	37, 68, 186, 364, 569, 2033
BspANI	GGCC	1 cut(s)	2193
BspCNI	CTCAG	7 cut(s)	417, 1033, 1053, 1170, 1300, 1438, 2334
BspDI	ATCGAT	2 cut(s)	781, 1779
BspEI	TCCGGA	1 cut(s)	1911
BspFNI	CGCG	1 cut(s)	364
BspHI	TCATGA	1 cut(s)	712
BspLI	GGNNCC	4 cut(s)	639, 1427, 1555, 1686
BspOI	GCTAGC	2 cut(s)	168, 387
BspPI	GGATC	6 cut(s)	194, 282, 681, 1012, 2214, 2384
BspQI	GCTCTTC	2 cut(s)	714, 2170
BspT107I	GGYRCC	1 cut(s)	1553
BspTI	CTTAAG	1 cut(s)	916
BspTNI	GGTCTC	1 cut(s)	1662
BsrDI	GCAATG	1 cut(s)	153
BsrGI	TGTACA	1 cut(s)	1636
BsrI	ACTGG	8 cut(s)	932, 1168, 1356, 1402, 1671, 1842, 1862, 2436
BssECI	CCNNGG	5 cut(s)	54, 291, 958, 1332, 2113
BssSI	CACGAG	2 cut(s)	405, 2394
BssT1I	CCWWGG	3 cut(s)	54, 1332, 2113
Bst2BI	CACGAG	2 cut(s)	405, 2394
Bst2UI	CCWGG	2 cut(s)	293, 401
Bst4CI	ACNGT	5 cut(s)	321, 327, 1129, 2280, 2333
Bst6I	CTCTTC	4 cut(s)	714, 2065, 2170, 2229
BstAFI	CTTAAG	1 cut(s)	916
BstAPI	GCANNNNNTGC	1 cut(s)	1235
BstAUI	TGTACA	1 cut(s)	1636
BstC8I	GCNNGC	9 cut(s)	41, 166, 385, 501, 1227, 1323, 2046, 2195, 2261
BstDSI	CCRYGG	2 cut(s)	54, 1332
BstEII	GGTNACC	2 cut(s)	451, 890
BstENI	CCTNNNNNAGG	1 cut(s)	461
BstF5I	GGATG	5 cut(s)	113, 592, 726, 802, 1675
BstFNI	CGCG	1 cut(s)	364
BstH2I	RGCGCY	2 cut(s)	171, 1453
BstHHI	GCGC	3 cut(s)	170, 364, 1452
BstMAI	GTCTC	1 cut(s)	1662
BstMCI	CGRYCG	1 cut(s)	2332
BstMWI	GCNNNNNNNGC	4 cut(s)	441, 1235, 1892, 2124
BstNI	CCWGG	2 cut(s)	293, 401
BstNSI	RCATGY	2 cut(s)	1513, 2263
BstPI	GGTNACC	2 cut(s)	451, 890
BstSCI	CCNGG	2 cut(s)	291, 399
BstSLI	GKGCMC	3 cut(s)	1240, 1558, 2222
BstUI	CGCG	1 cut(s)	364
BstV1I	GCAGC	4 cut(s)	691, 844, 1002, 2111
BstV2I	GAAGAC	1 cut(s)	756
BstX2I	RGATCY	4 cut(s)	686, 1004, 1174, 2206
BstYI	RGATCY	4 cut(s)	686, 1004, 1174, 2206
Bsu15I	ATCGAT	2 cut(s)	781, 1779
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	1 cut(s)	2193
BsuTUI	ATCGAT	2 cut(s)	781, 1779
BtgI	CCRYGG	2 cut(s)	54, 1332
BtrI	CACGTC	1 cut(s)	448
BtsCI	GGATG	5 cut(s)	113, 592, 726, 802, 1675
BtsI	GCAGTG	1 cut(s)	2442
BtsIMutI	CAGTG	9 cut(s)	120, 214, 422, 580, 1134, 1363, 1395, 1664, 2442
Cac8I	GCNNGC	9 cut(s)	41, 166, 385, 501, 1227, 1323, 2046, 2195, 2261
CciI	TCATGA	1 cut(s)	712
CfoI	GCGC	3 cut(s)	170, 364, 1452
Cfr13I	GGNCC	2 cut(s)	224, 2464
ClaI	ATCGAT	2 cut(s)	781, 1779
Csp6I	GTAC	3 cut(s)	1637, 1891, 2181
CspCI	CAANNNNNGTGG	4 cut(s)	192, 227, 2219, 2254
CviQI	GTAC	3 cut(s)	1637, 1891, 2181
DraI	TTTAAA	1 cut(s)	1488
DraIII	CACNNNGTG	1 cut(s)	1129
DrdI	GACNNNNNNGTC	1 cut(s)	1062
DriI	GACNNNNNGTC	1 cut(s)	2152
DseDI	GACNNNNNNGTC	1 cut(s)	1062
Eam1104I	CTCTTC	4 cut(s)	714, 2065, 2170, 2229
Eam1105I	GACNNNNNGTC	1 cut(s)	2152
EarI	CTCTTC	4 cut(s)	714, 2065, 2170, 2229
Ecl136II	GAGCTC	1 cut(s)	1380
Eco130I	CCWWGG	3 cut(s)	54, 1332, 2113
Eco24I	GRGCYC	1 cut(s)	1382
Eco31I	GGTCTC	1 cut(s)	1662
Eco47I	GGWCC	2 cut(s)	224, 2464
Eco53kI	GAGCTC	1 cut(s)	1380
Eco57I	CTGAAG	1 cut(s)	144
Eco88I	CYCGRG	1 cut(s)	2119
Eco91I	GGTNACC	2 cut(s)	451, 890
EcoICRI	GAGCTC	1 cut(s)	1380
EcoNI	CCTNNNNNAGG	1 cut(s)	461
EcoO109I	RGGNCCY	2 cut(s)	224, 2464
EcoO65I	GGTNACC	2 cut(s)	451, 890
EcoRII	CCWGG	2 cut(s)	291, 399
EcoT14I	CCWWGG	3 cut(s)	54, 1332, 2113
EcoT22I	ATGCAT	2 cut(s)	6, 2094
EcoT38I	GRGCYC	1 cut(s)	1382
ErhI	CCWWGG	3 cut(s)	54, 1332, 2113
FalI	AAGNNNNNCTT	2 cut(s)	1468, 1500
FaqI	GGGAC	3 cut(s)	164, 280, 1314
FauI	CCCGC	1 cut(s)	179
FauNDI	CATATG	3 cut(s)	142, 303, 664
FbaI	TGATCA	2 cut(s)	1243, 1390
Fnu4HI	GCNGC	4 cut(s)	705, 858, 991, 2125
FokI	GGATG	5 cut(s)	120, 599, 733, 809, 1682
FriOI	GRGCYC	1 cut(s)	1382
Fsp4HI	GCNGC	4 cut(s)	705, 858, 991, 2125
FspBI	CTAG	6 cut(s)	165, 384, 1326, 1823, 2103, 2210
GlaI	GCGC	3 cut(s)	169, 363, 1451
GluI	GCNGC	4 cut(s)	705, 858, 991, 2125
GsaI	CCCAGC	1 cut(s)	2136
GsuI	CTGGAG	1 cut(s)	1419
HaeII	RGCGCY	2 cut(s)	171, 1453
HaeIII	GGCC	1 cut(s)	2193
HapII	CCGG	2 cut(s)	1614, 1912
HhaI	GCGC	3 cut(s)	170, 364, 1452
Hin6I	GCGC	3 cut(s)	168, 362, 1450
HinP1I	GCGC	3 cut(s)	168, 362, 1450
HincII	GTYRAC	1 cut(s)	1016
HindII	GTYRAC	1 cut(s)	1016
HindIII	AAGCTT	1 cut(s)	1901
HinfI	GANTC	9 cut(s)	23, 1063, 1132, 1194, 1853, 2138, 2306, 2441, 2483
HpaII	CCGG	2 cut(s)	1614, 1912
HphI	GGTGA	3 cut(s)	529, 935, 1194
Hpy166II	GTNNAC	4 cut(s)	1016, 1238, 1637, 2220
Hpy8I	GTNNAC	4 cut(s)	1016, 1238, 1637, 2220
Hpy99I	CGWCG	2 cut(s)	449, 1521
HpyAV	CCTTC	6 cut(s)	119, 467, 930, 1698, 2183, 2405
HpyCH4III	ACNGT	5 cut(s)	321, 327, 1129, 2280, 2333
HpyCH4IV	ACGT	2 cut(s)	447, 904
HpyF10VI	GCNNNNNNNGC	4 cut(s)	441, 1235, 1892, 2124
HpySE526I	ACGT	2 cut(s)	447, 904
HspAI	GCGC	3 cut(s)	168, 362, 1450
Kpn2I	TCCGGA	1 cut(s)	1911
Ksp22I	TGATCA	2 cut(s)	1243, 1390
LguI	GCTCTTC	2 cut(s)	714, 2170
LmnI	GCTCC	7 cut(s)	469, 637, 1309, 1425, 1616, 1684, 2384
Lsp1109I	GCAGC	4 cut(s)	691, 844, 1002, 2111
MaeI	CTAG	6 cut(s)	165, 384, 1326, 1823, 2103, 2210
MaeII	ACGT	2 cut(s)	447, 904
MboII	GAAGA	9 cut(s)	275, 587, 701, 756, 1068, 1418, 2052, 2157, 2216
MfeI	CAATTG	1 cut(s)	1503
MflI	RGATCY	4 cut(s)	686, 1004, 1174, 2206
MhlI	GDGCHC	5 cut(s)	1240, 1382, 1558, 1613, 2222
MlyI	GAGTC	4 cut(s)	17, 1072, 2450, 2477
MmeI	TCCRAC	1 cut(s)	1755
Mph1103I	ATGCAT	2 cut(s)	6, 2094
MroI	TCCGGA	1 cut(s)	1911
MroXI	GAANNNNTTC	2 cut(s)	282, 1198
MseI	TTAA	8 cut(s)	648, 917, 1487, 1580, 1674, 2010, 2066, 2402
MslI	CAYNNNNRTG	2 cut(s)	1086, 2258
MspCI	CTTAAG	1 cut(s)	916
MspI	CCGG	2 cut(s)	1614, 1912
MspR9I	CCNGG	2 cut(s)	293, 401
MunI	CAATTG	1 cut(s)	1503
Mva1269I	GAATGC	2 cut(s)	969, 2035
MvaI	CCWGG	2 cut(s)	293, 401
MvnI	CGCG	1 cut(s)	364
MwoI	GCNNNNNNNGC	4 cut(s)	441, 1235, 1892, 2124
NcoI	CCATGG	2 cut(s)	54, 1332
NdeI	CATATG	3 cut(s)	142, 303, 664
NheI	GCTAGC	2 cut(s)	164, 383
NlaIV	GGNNCC	4 cut(s)	639, 1427, 1555, 1686
NmeAIII	GCCGAG	1 cut(s)	983
NmuCI	GTSAC	5 cut(s)	517, 923, 2000, 2154, 2315
NsiI	ATGCAT	2 cut(s)	6, 2094
NspI	RCATGY	2 cut(s)	1513, 2263
PaeI	GCATGC	1 cut(s)	2263
PaeR7I	CTCGAG	1 cut(s)	2119
PagI	TCATGA	1 cut(s)	712
PciSI	GCTCTTC	2 cut(s)	714, 2170
PctI	GAATGC	2 cut(s)	969, 2035
PdmI	GAANNNNTTC	2 cut(s)	282, 1198
PfeI	GAWTC	5 cut(s)	1132, 1194, 1853, 2138, 2306
PflMI	CCANNNNNTGG	1 cut(s)	2200
PkrI	GCNGC	4 cut(s)	706, 859, 992, 2126
PleI	GAGTC	4 cut(s)	17, 1071, 2449, 2477
PpsI	GAGTC	4 cut(s)	17, 1071, 2449, 2477
PpuMI	RGGWCCY	2 cut(s)	224, 2464
PshBI	ATTAAT	1 cut(s)	648
PsiI	TTATAA	1 cut(s)	1697
Psp124BI	GAGCTC	1 cut(s)	1382
Psp1406I	AACGTT	1 cut(s)	904
Psp5II	RGGWCCY	2 cut(s)	224, 2464
Psp6I	CCWGG	2 cut(s)	291, 399
PspEI	GGTNACC	2 cut(s)	451, 890
PspFI	CCCAGC	1 cut(s)	2132
PspGI	CCWGG	2 cut(s)	291, 399
PspN4I	GGNNCC	4 cut(s)	639, 1427, 1555, 1686
PspPI	GGNCC	2 cut(s)	224, 2464
PspPPI	RGGWCCY	2 cut(s)	224, 2464
PspXI	VCTCGAGB	1 cut(s)	2119
PsrI	GAACNNNNNNTAC	2 cut(s)	2259, 2291
PsuI	RGATCY	4 cut(s)	686, 1004, 1174, 2206
RsaI	GTAC	3 cut(s)	1638, 1892, 2182
RsaNI	GTAC	3 cut(s)	1637, 1891, 2181
RseI	CAYNNNNRTG	2 cut(s)	1086, 2258
SacI	GAGCTC	1 cut(s)	1382
SapI	GCTCTTC	2 cut(s)	714, 2170
SaqAI	TTAA	8 cut(s)	648, 917, 1487, 1580, 1674, 2010, 2066, 2402
SatI	GCNGC	4 cut(s)	705, 858, 991, 2125
Sau96I	GGNCC	2 cut(s)	224, 2464
SchI	GAGTC	4 cut(s)	17, 1072, 2450, 2477
ScrFI	CCNGG	2 cut(s)	293, 401
SduI	GDGCHC	5 cut(s)	1240, 1382, 1558, 1613, 2222
Sfr274I	CTCGAG	1 cut(s)	2119
SinI	GGWCC	2 cut(s)	224, 2464
SlaI	CTCGAG	1 cut(s)	2119
SmiMI	CAYNNNNRTG	2 cut(s)	1086, 2258
SmlI	CTYRAG	5 cut(s)	461, 916, 1299, 2119, 2173
SmoI	CTYRAG	5 cut(s)	461, 916, 1299, 2119, 2173
SphI	GCATGC	1 cut(s)	2263
SsiI	CCGC	6 cut(s)	37, 68, 186, 364, 569, 2033
SspI	AATATT	1 cut(s)	337
SspMI	CTAG	6 cut(s)	165, 384, 1326, 1823, 2103, 2210
SstI	GAGCTC	1 cut(s)	1382
StyD4I	CCNGG	2 cut(s)	291, 399
StyI	CCWWGG	3 cut(s)	54, 1332, 2113
TaaI	ACNGT	5 cut(s)	321, 327, 1129, 2280, 2333
TaiI	ACGT	2 cut(s)	450, 907
TaqI	TCGA	8 cut(s)	18, 286, 748, 781, 1779, 2120, 2328, 2444
TatI	WGTACW	1 cut(s)	1636
TfiI	GAWTC	5 cut(s)	1132, 1194, 1853, 2138, 2306
Tru1I	TTAA	8 cut(s)	648, 917, 1487, 1580, 1674, 2010, 2066, 2402
Tru9I	TTAA	8 cut(s)	648, 917, 1487, 1580, 1674, 2010, 2066, 2402
TscAI	CASTG	9 cut(s)	127, 214, 429, 580, 1134, 1363, 1402, 1671, 2442
TseFI	GTSAC	5 cut(s)	517, 923, 2000, 2154, 2315
TseI	GCWGC	4 cut(s)	704, 857, 990, 2124
Tsp45I	GTSAC	5 cut(s)	517, 923, 2000, 2154, 2315
TspGWI	ACGGA	1 cut(s)	1681
TspRI	CASTG	9 cut(s)	127, 214, 429, 580, 1134, 1363, 1402, 1671, 2442
Van91I	CCANNNNNTGG	1 cut(s)	2200
Vha464I	CTTAAG	1 cut(s)	916
VneI	GTGCAC	2 cut(s)	1236, 2218
VpaK11BI	GGWCC	2 cut(s)	224, 2464
VspI	ATTAAT	1 cut(s)	648
XagI	CCTNNNNNAGG	1 cut(s)	461
XapI	RAATTY	5 cut(s)	239, 413, 1441, 1699, 1874
XbaI	TCTAGA	1 cut(s)	2209
XceI	RCATGY	2 cut(s)	1513, 2263
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1566
XhoI	CTCGAG	1 cut(s)	2119
XmnI	GAANNNNTTC	2 cut(s)	282, 1198
XspI	CTAG	6 cut(s)	165, 384, 1326, 1823, 2103, 2210
Zsp2I	ATGCAT	2 cut(s)	6, 2094

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.