Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0008303

Physical Location & Seq

Genomic Coordinates Forward (+)

51227093 .. 51235529

Gene Structure 8437 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG290900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGCATTTCGCAAAGCTCGATGATTCTCCTATGTTCCGCAAGCAGATACAGGGCATGGAGGACAGTGCCGAGTCATTGAGGGAGAGAAGTCTAAAGTTTTACAAAGGATGTCGAAAATACACTGAAGGTCTTGGGGAGGCTTATGATGGGGACATTGCTTTTGCTAGTGCCCTAGAAACATTTGGTGGGGGGCATAATGATCCAATTAGTGTCGCTTTTGGAGGCCCTGTTATGACCAAATTTACTATCGCATTAAGAGAAATTGGGACATACAAGGAAGTTCTTCGCTCCCAGGTTGAGCATATGCTAAATGACAGATTGTTACAATTTGTGAATTTTGATTTGCATGAGGTCAAGGAAGCGCGGAAACGTTTTGACAAGGCTAGCCTTCTTTATGACCAGGCTCGCGAAAAATTTCTCTCACTGAGAAAAGGAACAAGGAATGATGTAGCCACCATGGTAGAGGAGGAGCTTCATAATGCAAGGTCTACATTTGAGCAAGCTCGTTTTAGTCTTGTGACTGCTCTTTCTACTGTTGAAGCAAAAAAGAGGTTTGAGTTTCTGGAAGCGGTCAGTGGGACAATGGATGCCCATCTTCGTTACTTCAAACAGGGTTACGAGTTGTTGCATCAAATGGAACCCTATATTAATCAGGTCTTGACTTATGCTCAACAGTCAAGAGAAAGATCCAACTATGAACAGGCAGCTCTTAATGAAAGGATGCAAGATTACAAAAGACAGGTCGATAGAGAGAGTAGGTGGTCGTCCAATGGTTCTAATGGGTCTCCTAATGGAGATGGGATACAAGCTATTGGTAGAAGTTCACATAAAATGATAGAGGCTGTTATGCAATCTGCTGCAAAGGGAAAGGTTCAAACCATTAGGCAAGGTTATCTCTCAAAGAGGTCCTCAAACTTGAGGGGTGACTGGAAAAGAAGATTTTTTGTTCTTGATAGCCGAGGAATGCTCTATTACTATCGGAAACAAATCAGCAAATCATCATCTGGCTCTGGTAGTCAACTTTCTGGTCAGAGGAATAGTTCTGAGCTTGGTTCTGGACTGTTGAGTCGCTGGCTTTCTTCTCATTATCATGGTGGAGTGCATGATGAGAAATCTGTTGCTCATCACACAGTGAATCTGCTTACATCAACAATCAAAGTTGACGCTGACCAGTCGGACCTAAGATTTTGTTTCAGGATCATTTCACCAACAAAGAACTATACTTTGCAGGCAGAGAGTGCACTTGATCAAATGGATTGGATTGAAAAGATAACGGGGGTTATTGCTTCATTACTTAGTTCTCAGGCTCCTGAGAGGTTTCTGCCTGCTAGTCCCATGGGAAGCCATCGTCGTTCTGCCAGTGAGAGTAGTTCGTTTGAGAGTTCTGATTTTGATCACACTGCAGTTGAAGAACTTGCATTGGACAGAAGCGGCCTGAATAATGCTGACCACCGCCAATTAAGAAGTTCGCAACAGCAACGGTCTTCTTTAAGAAGTGAGAAGACAATTGACACTCTACGACGAGTATGTGGGAATGATAAATGTGCTGATTGTGGTGCCCCTGAGCCAGATTGGGCATCATTAAATCTTGGCGTTCTTGTTTGCATTGAATGTTCTGGTGTTCATCGTAACCTTGGTGTTCATATCTCAAAGGTAAGGTCTCTGACACTGGATGTCAAAGTATGGGAGCCTTCTGTCATTAATTTGTTTCAGTCATTGGGTAATGCCTTTGCAAACTCTGTCTGGGAGGAACTTTTGCAATCAAGAAGTGCTTTTCAGCTTGATCTTATAGCCACAGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003002 GO:0003674 GO:0005096 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005798 GO:0005829 GO:0005886 GO:0006810 GO:0006897 GO:0007275 GO:0007389 GO:0008047 GO:0008150 GO:0008289 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009965 GO:0010016 GO:0010033 GO:0010051 GO:0010087 GO:0012505 GO:0016020 GO:0016192 GO:0030133 GO:0030135 GO:0030136 GO:0030140 GO:0030234 GO:0030695 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0035091 GO:0042221 GO:0043085 GO:0043087 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050790 GO:0050896 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0060589 GO:0065007 GO:0065009 GO:0071944 GO:0097708 GO:0098657 GO:0098772 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko04144 map04144

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 Ank_5 ArfGap BAR_3 PH Pkinase

Protein Analysis

600

Amino Acids

67.62

Weight (kDa)

8.49

Isoelectric Point (pI)

61.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAR_3	PF16746	6 - 235	7e-40	BAR domain of APPL family
BAR	PF03114	25 - 216	1.4e-12	BAR domain
PH	PF00169	294 - 428	8.3e-12	PH domain
ArfGap	PF01412	501 - 589	1.7e-31	Putative GTPase activating protein for Arf

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13300
fragaria_vesca	FvH4_4g22770 FvH4_4g22770
malus_domestica	MD13G1129800.v1.1 MD16G1130100.v1.1
prunus_persica	Prupe.1G216500_v2.0.a1
pyrus_communis	pycom13g11290 pycom16g11080
rosa_chinensis	RchiOBHm_Chr4g0428991
rosa_laevigata	RLG00000007106
rosa_multiflora	Rmu_sc0008629.1_g000014
rosa_roxburghii	Rroxscaffold_5G00370650
rosa_rugosa	Rorug04G0231400 Rorug04G0231500 Rorug04G0231600 Rorug04G0231700 Rorug04G0231800
rosa_samantha	Rh4AG287900 Rh4BG293900 Rh4CG309500 Rh4DG290900
rosa_wichuraiana	Rw0G014080 Rw4G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1065
AccB1I	GGYRCC	1 cut(s)	1556
AccI	GTMKAC	1 cut(s)	488
AccII	CGCG	2 cut(s)	364, 408
AciI	CCGC	5 cut(s)	37, 364, 569, 1431, 1453
AclI	AACGTT	1 cut(s)	370
AclWI	GGATC	3 cut(s)	194, 681, 1205
AcsI	RAATTY	3 cut(s)	239, 334, 413
AcuI	CTGAAG	1 cut(s)	144
AdeI	CACNNNGTG	1 cut(s)	1132
AgsI	TTSAA	6 cut(s)	539, 607, 875, 1265, 1409, 1610
AjnI	CCWGG	2 cut(s)	291, 399
AluBI	AGCT	7 cut(s)	16, 472, 503, 707, 809, 1048, 1780
AluI	AGCT	7 cut(s)	16, 472, 503, 707, 809, 1048, 1780
Alw21I	GWGCWC	1 cut(s)	1243
Alw26I	GTCTC	2 cut(s)	789, 1665
Alw44I	GTGCAC	1 cut(s)	1239
AlwI	GGATC	3 cut(s)	194, 681, 1205
AoxI	GGCC	2 cut(s)	223, 1432
ApaLI	GTGCAC	1 cut(s)	1239
ApeKI	GCWGC	2 cut(s)	704, 857
ApoI	RAATTY	3 cut(s)	239, 334, 413
ArsI	GACNNNNNNTTYG	6 cut(s)	143, 175, 726, 758, 1643, 1675
AseI	ATTAAT	2 cut(s)	648, 1701
Asp700I	GAANNNNTTC	2 cut(s)	282, 414
AspLEI	GCGC	1 cut(s)	364
AspS9I	GGNCC	3 cut(s)	224, 906, 1177
AsuHPI	GGTGA	2 cut(s)	935, 1197
AsuNHI	GCTAGC	1 cut(s)	383
AvaII	GGWCC	2 cut(s)	906, 1177
BaeGI	GKGCMC	3 cut(s)	172, 1243, 1561
BanI	GGYRCC	1 cut(s)	1556
BbsI	GAAGAC	2 cut(s)	1476, 1508
Bbv12I	GWGCWC	1 cut(s)	1243
BbvI	GCAGC	2 cut(s)	716, 844
BccI	CCATC	4 cut(s)	140, 600, 791, 1353
BciT130I	CCWGG	2 cut(s)	293, 401
BciVI	GTATCC	1 cut(s)	795
BclI	TGATCA	2 cut(s)	1246, 1393
BcoDI	GTCTC	2 cut(s)	789, 1665
BfaI	CTAG	4 cut(s)	165, 173, 384, 1329
BfmI	CTRYAG	1 cut(s)	1401
BfuI	GTATCC	1 cut(s)	795
BisI	GCNGC	3 cut(s)	705, 858, 1432
BlsI	GCNGC	3 cut(s)	706, 859, 1433
Bme1390I	CCNGG	2 cut(s)	293, 401
Bme18I	GGWCC	2 cut(s)	906, 1177
BmgT120I	GGNCC	3 cut(s)	224, 906, 1177
BmiI	GGNNCC	4 cut(s)	639, 1308, 1558, 1689
BmrFI	CCNGG	2 cut(s)	293, 401
BmsI	GCATC	4 cut(s)	577, 637, 711, 1586
BmtI	GCTAGC	1 cut(s)	387
BpiI	GAAGAC	2 cut(s)	1476, 1508
BplI	GAGNNNNNCTC	2 cut(s)	951, 983
Bpu10I	CCTNAGC	1 cut(s)	1563
BpuEI	CTTGAG	1 cut(s)	937
BsaBI	GATNNNNATC	2 cut(s)	591, 1392
BsaI	GGTCTC	2 cut(s)	789, 1665
BsaJI	CCNNGG	5 cut(s)	291, 456, 958, 1335, 1633
BsaXI	ACNNNNNCTCC	2 cut(s)	213, 243
Bse1I	ACTGG	4 cut(s)	932, 1171, 1359, 1674
Bse3DI	GCAATG	1 cut(s)	153
Bse8I	GATNNNNATC	2 cut(s)	591, 1392
BseBI	CCWGG	2 cut(s)	293, 401
BseDI	CCNNGG	5 cut(s)	291, 456, 958, 1335, 1633
BseGI	GGATG	4 cut(s)	113, 592, 726, 1678
BseJI	GATNNNNATC	2 cut(s)	591, 1392
BseMI	GCAATG	1 cut(s)	153
BseMII	CTCAG	5 cut(s)	416, 1035, 1302, 1316, 1554
BseNI	ACTGG	4 cut(s)	932, 1171, 1359, 1674
BseRI	GAGGAG	2 cut(s)	479, 482
BseSI	GKGCMC	3 cut(s)	172, 1243, 1561
BseXI	GCAGC	2 cut(s)	716, 844
Bsh1236I	CGCG	2 cut(s)	364, 408
BshFI	GGCC	2 cut(s)	225, 1434
BshNI	GGYRCC	1 cut(s)	1556
BsiHKAI	GWGCWC	1 cut(s)	1243
BslFI	GGGAC	4 cut(s)	164, 280, 592, 1317
BsmAI	GTCTC	2 cut(s)	789, 1665
BsmFI	GGGAC	4 cut(s)	164, 280, 592, 1317
BsmI	GAATGC	1 cut(s)	969
BsnI	GGCC	2 cut(s)	225, 1434
Bso31I	GGTCTC	2 cut(s)	789, 1665
Bsp1286I	GDGCHC	3 cut(s)	172, 1243, 1561
Bsp143I	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
Bsp19I	CCATGG	2 cut(s)	456, 1335
Bsp68I	TCGCGA	1 cut(s)	408
BspACI	CCGC	5 cut(s)	37, 364, 569, 1431, 1453
BspANI	GGCC	2 cut(s)	225, 1434
BspCNI	CTCAG	5 cut(s)	417, 1036, 1303, 1315, 1555
BspFNI	CGCG	2 cut(s)	364, 408
BspLI	GGNNCC	4 cut(s)	639, 1308, 1558, 1689
BspMAI	CTGCAG	1 cut(s)	1405
BspOI	GCTAGC	1 cut(s)	387
BspPI	GGATC	3 cut(s)	194, 681, 1205
BspT107I	GGYRCC	1 cut(s)	1556
BspTNI	GGTCTC	2 cut(s)	789, 1665
BsrDI	GCAATG	1 cut(s)	153
BsrI	ACTGG	4 cut(s)	932, 1171, 1359, 1674
BssECI	CCNNGG	5 cut(s)	291, 456, 958, 1335, 1633
BssMI	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
BssT1I	CCWWGG	3 cut(s)	456, 1335, 1633
Bst2UI	CCWGG	2 cut(s)	293, 401
Bst4CI	ACNGT	6 cut(s)	65, 535, 675, 1062, 1132, 1482
BstAPI	GCANNNNNTGC	1 cut(s)	1238
BstC8I	GCNNGC	7 cut(s)	41, 385, 406, 501, 1073, 1230, 1326
BstDEI	CTNAG	7 cut(s)	425, 1044, 1181, 1295, 1302, 1311, 1563
BstDSI	CCRYGG	2 cut(s)	456, 1335
BstF5I	GGATG	4 cut(s)	113, 592, 726, 1678
BstFNI	CGCG	2 cut(s)	364, 408
BstHHI	GCGC	1 cut(s)	364
BstKTI	GATC	6 cut(s)	202, 689, 1200, 1249, 1396, 1786
BstMAI	GTCTC	2 cut(s)	789, 1665
BstMBI	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
BstMWI	GCNNNNNNNGC	1 cut(s)	1238
BstNI	CCWGG	2 cut(s)	293, 401
BstSCI	CCNGG	2 cut(s)	291, 399
BstSFI	CTRYAG	1 cut(s)	1401
BstSLI	GKGCMC	3 cut(s)	172, 1243, 1561
BstUI	CGCG	2 cut(s)	364, 408
BstV1I	GCAGC	2 cut(s)	716, 844
BstV2I	GAAGAC	2 cut(s)	1476, 1508
BstX2I	RGATCY	1 cut(s)	686
BstYI	RGATCY	1 cut(s)	686
BsuI	GTATCC	1 cut(s)	795
BsuRI	GGCC	2 cut(s)	225, 1434
BtgI	CCRYGG	2 cut(s)	456, 1335
BtsCI	GGATG	4 cut(s)	113, 592, 726, 1678
BtsI	GCAGTG	1 cut(s)	1398
BtsIMutI	CAGTG	8 cut(s)	70, 120, 422, 580, 1137, 1366, 1398, 1667
BtuMI	TCGCGA	1 cut(s)	408
Cac8I	GCNNGC	7 cut(s)	41, 385, 406, 501, 1073, 1230, 1326
CfoI	GCGC	1 cut(s)	364
Cfr13I	GGNCC	3 cut(s)	224, 906, 1177
CseI	GACGC	1 cut(s)	1172
CviAII	CATG	6 cut(s)	55, 347, 457, 1091, 1103, 1336
DdeI	CTNAG	7 cut(s)	425, 1044, 1181, 1295, 1302, 1311, 1563
DpnI	GATC	6 cut(s)	201, 688, 1199, 1248, 1395, 1785
DpnII	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
DraIII	CACNNNGTG	1 cut(s)	1132
DrdI	GACNNNNNNGTC	1 cut(s)	1065
DseDI	GACNNNNNNGTC	1 cut(s)	1065
Eco130I	CCWWGG	3 cut(s)	456, 1335, 1633
Eco31I	GGTCTC	2 cut(s)	789, 1665
Eco47I	GGWCC	2 cut(s)	906, 1177
Eco57I	CTGAAG	1 cut(s)	144
EcoO109I	RGGNCCY	2 cut(s)	224, 906
EcoRII	CCWGG	2 cut(s)	291, 399
EcoT14I	CCWWGG	3 cut(s)	456, 1335, 1633
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	456, 1335, 1633
FaeI	CATG	6 cut(s)	58, 350, 460, 1094, 1106, 1339
FalI	AAGNNNNNCTT	2 cut(s)	1756, 1788
FaqI	GGGAC	4 cut(s)	164, 280, 592, 1317
FatI	CATG	6 cut(s)	54, 346, 456, 1090, 1102, 1335
FauNDI	CATATG	1 cut(s)	303
FbaI	TGATCA	2 cut(s)	1246, 1393
FblI	GTMKAC	1 cut(s)	488
Fnu4HI	GCNGC	3 cut(s)	705, 858, 1432
FokI	GGATG	4 cut(s)	120, 599, 733, 1685
Fsp4HI	GCNGC	3 cut(s)	705, 858, 1432
FspBI	CTAG	4 cut(s)	165, 173, 384, 1329
GlaI	GCGC	1 cut(s)	363
GluI	GCNGC	3 cut(s)	705, 858, 1432
HaeIII	GGCC	2 cut(s)	225, 1434
HgaI	GACGC	1 cut(s)	1172
HhaI	GCGC	1 cut(s)	364
Hin1II	CATG	6 cut(s)	58, 350, 460, 1094, 1106, 1339
Hin6I	GCGC	1 cut(s)	362
HinP1I	GCGC	1 cut(s)	362
HincII	GTYRAC	2 cut(s)	1019, 1162
HindII	GTYRAC	2 cut(s)	1019, 1162
HinfI	GANTC	4 cut(s)	23, 71, 1066, 1135
HphI	GGTGA	2 cut(s)	935, 1197
Hpy166II	GTNNAC	5 cut(s)	489, 824, 1019, 1162, 1241
Hpy188I	TCNGA	6 cut(s)	981, 1032, 1045, 1177, 1387, 1665
Hpy188III	TCNNGA	9 cut(s)	407, 563, 658, 678, 950, 1056, 1195, 1310, 1764
Hpy8I	GTNNAC	5 cut(s)	489, 824, 1019, 1162, 1241
Hpy99I	CGWCG	2 cut(s)	1353, 1524
HpyAV	CCTTC	3 cut(s)	119, 398, 1701
HpyCH4III	ACNGT	6 cut(s)	65, 535, 675, 1062, 1132, 1482
HpyCH4IV	ACGT	1 cut(s)	370
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1238
HpyF3I	CTNAG	7 cut(s)	425, 1044, 1181, 1295, 1302, 1311, 1563
HpySE526I	ACGT	1 cut(s)	370
Hsp92II	CATG	6 cut(s)	58, 350, 460, 1094, 1106, 1339
HspAI	GCGC	1 cut(s)	362
Ksp22I	TGATCA	2 cut(s)	1246, 1393
Kzo9I	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
LmnI	GCTCC	4 cut(s)	293, 469, 1312, 1687
Lsp1109I	GCAGC	2 cut(s)	716, 844
LweI	GCATC	4 cut(s)	577, 637, 711, 1586
MaeI	CTAG	4 cut(s)	165, 173, 384, 1329
MaeII	ACGT	1 cut(s)	370
MaeIII	GTNAC	6 cut(s)	321, 517, 599, 614, 923, 1628
MalI	GATC	6 cut(s)	201, 688, 1199, 1248, 1395, 1785
MboI	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
MboII	GAAGA	7 cut(s)	275, 587, 948, 1071, 1421, 1476, 1513
MfeI	CAATTG	1 cut(s)	1506
MflI	RGATCY	1 cut(s)	686
MhlI	GDGCHC	3 cut(s)	172, 1243, 1561
MluCI	AATT	9 cut(s)	204, 239, 261, 326, 334, 413, 1457, 1506, 1702
MlyI	GAGTC	2 cut(s)	80, 1075
MmeI	TCCRAC	2 cut(s)	714, 1155
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	2 cut(s)	282, 414
MseI	TTAA	7 cut(s)	254, 648, 711, 1460, 1490, 1583, 1701
MslI	CAYNNNNRTG	1 cut(s)	1089
MspR9I	CCNGG	2 cut(s)	293, 401
MunI	CAATTG	1 cut(s)	1506
Mva1269I	GAATGC	1 cut(s)	969
MvaI	CCWGG	2 cut(s)	293, 401
MvnI	CGCG	2 cut(s)	364, 408
MwoI	GCNNNNNNNGC	1 cut(s)	1238
NcoI	CCATGG	2 cut(s)	456, 1335
NdeI	CATATG	1 cut(s)	303
NdeII	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
NheI	GCTAGC	1 cut(s)	383
NlaIII	CATG	6 cut(s)	58, 350, 460, 1094, 1106, 1339
NlaIV	GGNNCC	4 cut(s)	639, 1308, 1558, 1689
NmeAIII	GCCGAG	2 cut(s)	94, 983
NmuCI	GTSAC	2 cut(s)	517, 923
NruI	TCGCGA	1 cut(s)	408
NsiI	ATGCAT	1 cut(s)	6
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PctI	GAATGC	1 cut(s)	969
PdmI	GAANNNNTTC	2 cut(s)	282, 414
PfeI	GAWTC	2 cut(s)	23, 1135
PkrI	GCNGC	3 cut(s)	706, 859, 1433
PleI	GAGTC	2 cut(s)	79, 1074
PpsI	GAGTC	2 cut(s)	79, 1074
PpuMI	RGGWCCY	1 cut(s)	906
PshBI	ATTAAT	2 cut(s)	648, 1701
Psp1406I	AACGTT	1 cut(s)	370
Psp5II	RGGWCCY	1 cut(s)	906
Psp6I	CCWGG	2 cut(s)	291, 399
PspGI	CCWGG	2 cut(s)	291, 399
PspN4I	GGNNCC	4 cut(s)	639, 1308, 1558, 1689
PspPI	GGNCC	3 cut(s)	224, 906, 1177
PspPPI	RGGWCCY	1 cut(s)	906
PstI	CTGCAG	1 cut(s)	1405
PsuI	RGATCY	1 cut(s)	686
RruI	TCGCGA	1 cut(s)	408
RseI	CAYNNNNRTG	1 cut(s)	1089
SaqAI	TTAA	7 cut(s)	254, 648, 711, 1460, 1490, 1583, 1701
SatI	GCNGC	3 cut(s)	705, 858, 1432
Sau3AI	GATC	6 cut(s)	199, 686, 1197, 1246, 1393, 1783
Sau96I	GGNCC	3 cut(s)	224, 906, 1177
SchI	GAGTC	2 cut(s)	80, 1075
ScrFI	CCNGG	2 cut(s)	293, 401
SduI	GDGCHC	3 cut(s)	172, 1243, 1561
SfaNI	GCATC	4 cut(s)	577, 637, 711, 1586
SfcI	CTRYAG	1 cut(s)	1401
SinI	GGWCC	2 cut(s)	906, 1177
SmiMI	CAYNNNNRTG	1 cut(s)	1089
SmlI	CTYRAG	1 cut(s)	916
SmoI	CTYRAG	1 cut(s)	916
Sse9I	AATT	9 cut(s)	204, 239, 261, 326, 334, 413, 1457, 1506, 1702
SsiI	CCGC	5 cut(s)	37, 364, 569, 1431, 1453
SspMI	CTAG	4 cut(s)	165, 173, 384, 1329
StyD4I	CCNGG	2 cut(s)	291, 399
StyI	CCWWGG	3 cut(s)	456, 1335, 1633
TaaI	ACNGT	6 cut(s)	65, 535, 675, 1062, 1132, 1482
TaiI	ACGT	1 cut(s)	373
TaqI	TCGA	3 cut(s)	18, 112, 744
TasI	AATT	9 cut(s)	204, 239, 261, 326, 334, 413, 1457, 1506, 1702
TauI	GCSGC	1 cut(s)	1434
TfiI	GAWTC	2 cut(s)	23, 1135
Tru1I	TTAA	7 cut(s)	254, 648, 711, 1460, 1490, 1583, 1701
Tru9I	TTAA	7 cut(s)	254, 648, 711, 1460, 1490, 1583, 1701
TscAI	CASTG	8 cut(s)	70, 127, 429, 580, 1137, 1366, 1405, 1674
TseFI	GTSAC	2 cut(s)	517, 923
TseI	GCWGC	2 cut(s)	704, 857
Tsp45I	GTSAC	2 cut(s)	517, 923
TspDTI	ATGAA	6 cut(s)	464, 711, 729, 1278, 1613, 1631
TspRI	CASTG	8 cut(s)	70, 127, 429, 580, 1137, 1366, 1405, 1674
VneI	GTGCAC	1 cut(s)	1239
VpaK11BI	GGWCC	2 cut(s)	906, 1177
VspI	ATTAAT	2 cut(s)	648, 1701
XapI	RAATTY	3 cut(s)	239, 334, 413
XmiI	GTMKAC	1 cut(s)	488
XmnI	GAANNNNTTC	2 cut(s)	282, 414
XspI	CTAG	4 cut(s)	165, 173, 384, 1329
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.